ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart33g08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC106080.1| Homo sapiens high-mobility group nucleosome binding domain 1, mRNA (cDNA clone MGC:117425 IMAGE:3855939), complete cds Length = 1247 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 23 ctcctcccgccgcccgagctgc 2
>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 Length = 340000 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 193317 ctcctcccgccgcccgagctgc 193338
>gb|AC094014.3| Papio anubis clone RP41-371B12, complete sequence Length = 161946 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 105542 ctcctcccgccgcccgagctgc 105521
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 ccgccgcgcacccgtacgacga 95 |||||||||||||||||||||| Sbjct: 291540 ccgccgcgcacccgtacgacga 291561
>gb|AF064861.5| Homo sapiens chromosome 21 clone RP1-128M19 map q22.2, complete sequence Length = 135578 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 75514 ctcctcccgccgcccgagctgc 75535
>emb|CR625629.1| full-length cDNA clone CS0DC009YF14 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1536 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 109 ctcctcccgccgcccgagctgc 88
>emb|CR597521.1| full-length cDNA clone CS0DA009YD09 of Neuroblastoma of Homo sapiens (human) Length = 1262 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 83 ctcctcccgccgcccgagctgc 62
>gb|AC087441.9| Homo sapiens chromosome 11, clone RP11-438N5, complete sequence Length = 151606 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 113178 ctcctcccgccgcccgagctgc 113199
>gb|AC107970.4| Homo sapiens chromosome 11, clone CTD-2238L16, complete sequence Length = 155365 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 86493 ctcctcccgccgcccgagctgc 86514
>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete sequence Length = 204622 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 82524 ctcctcccgccgcccgagctgc 82503
>ref|XM_938941.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-14 (High-mobility group nucleosome binding domain 1) (LOC649866), mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 83 ctcctcccgccgcccgagctgc 62
>ref|XM_927071.1| PREDICTED: Homo sapiens similar to Nonhistone chromosomal protein HMG-14 (High-mobility group nucleosome binding domain 1) (LOC643790), mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 83 ctcctcccgccgcccgagctgc 62
>ref|NM_004965.6| Homo sapiens high-mobility group nucleosome binding domain 1 (HMGN1), mRNA Length = 1313 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 90 ctcctcccgccgcccgagctgc 69
>gb|AC012478.18| Homo sapiens chromosome 15 clone RP11-386M24, complete sequence Length = 186540 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 140087 ctcctcccgccgcccgagctgc 140066
>gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, complete sequence Length = 147330 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 37373 ctcctcccgccgcccgagctgc 37394
>gb|AC091544.11| Homo sapiens chromosome 15, clone RP11-386M24, complete sequence Length = 186674 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 46442 ctcctcccgccgcccgagctgc 46463
>dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09, map 22, complete sequences Length = 152714 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 78672 ctcctcccgccgcccgagctgc 78693
>emb|AJ333611.1|HSA333611 Homo sapiens genomic sequence surrounding NotI site, clone NR1-CL14RS Length = 689 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 145 ctcctcccgccgcccgagctgc 166
>emb|AJ335216.1|HSA335216 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DN20RS Length = 708 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 145 ctcctcccgccgcccgagctgc 166
>emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-448G23, complete sequence Length = 173384 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 45412 ctcctcccgccgcccgagctgc 45433
>gb|BC107741.1| Homo sapiens high-mobility group nucleosome binding domain 1, mRNA (cDNA clone MGC:104230 IMAGE:6495117), complete cds Length = 1353 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 96 ctcctcccgccgcccgagctgc 75
>gb|BC070153.1| Homo sapiens high-mobility group nucleosome binding domain 1, mRNA (cDNA clone MGC:88133 IMAGE:6450636), complete cds Length = 808 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 28 ctcctcccgccgcccgagctgc 7
>dbj|AB209245.1| Homo sapiens mRNA for Hypothetical protein FLJ31471 variant protein Length = 4260 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 23 ctcctcccgccgcccgagctgc 2
>gb|M21339.1|HUMHMG14A Human non-histone chromosomal protein HMG-14 gene, complete cds Length = 8882 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 939 ctcctcccgccgcccgagctgc 918
>gb|J02621.1|HUMHMG14 Human non-histone chromosomal protein HMG-14 mRNA, complete cds Length = 1249 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctcctcccgccgcccgagctgc 187 |||||||||||||||||||||| Sbjct: 36 ctcctcccgccgcccgagctgc 15
>gb|AE010358.1| Methanopyrus kandleri AV19 section 57 of 157 of the complete genome Length = 11739 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 gagatcgacgagttccgggag 345 ||||||||||||||||||||| Sbjct: 7656 gagatcgacgagttccgggag 7676
>gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosome 7, complete sequence Length = 189323 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gctgccttcgcctccgcccct 437 ||||||||||||||||||||| Sbjct: 38448 gctgccttcgcctccgcccct 38468
>ref|XM_476454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1920 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctgctgctgcgccgacgccgc 248 ||||||||||||||||||||| Sbjct: 1791 ctgctgctgcgccgacgccgc 1771
>gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence Length = 100828 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 cgcccgagctgccgctggccttcgg 200 |||||||||||||||| |||||||| Sbjct: 56776 cgcccgagctgccgctcgccttcgg 56752
>gb|AY657625.1| Synthetic construct Peudomonas aeruginosa clone FLH041335.01F PA3665 gene, partial cds Length = 624 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 tggccttcgggttgcccgccg 211 ||||||||||||||||||||| Sbjct: 376 tggccttcgggttgcccgccg 356
>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185790 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 15790 gccgccgcctacacctcgcccctgg 15766
>gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187555 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 70395 gccgccgcctacacctcgcccctgg 70371 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 50852 gccgccgcctacacctcgcccctgg 50828
>ref|NM_168260.1| Drosophila melanogaster CG13679-RB, transcript variant B (CG13679), mRNA Length = 488 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 345 gccgccgcctacacctcgcccctgg 369
>ref|NM_139936.1| Drosophila melanogaster CG13678-RA (CG13678), mRNA Length = 557 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 352 gccgccgcctacacctcgcccctgg 376
>ref|NM_139933.1| Drosophila melanogaster CG13679-RA, transcript variant A (CG13679), mRNA Length = 501 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 358 gccgccgcctacacctcgcccctgg 382
>gb|AC104448.2| Homo sapiens chromosome 3 clone RP11-24C3, complete sequence Length = 155470 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ggccgacgcccgcctcggcgc 418 ||||||||||||||||||||| Sbjct: 88680 ggccgacgcccgcctcggcgc 88660
>gb|AC093891.3| Homo sapiens BAC clone RP11-691E1 from 4, complete sequence Length = 95771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tcctcccgccgcccgagctgc 187 ||||||||||||||||||||| Sbjct: 12634 tcctcccgccgcccgagctgc 12614
>gb|AY071202.1| Drosophila melanogaster RE24439 full length cDNA Length = 575 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 352 gccgccgcctacacctcgcccctgg 376
>gb|AY071121.1| Drosophila melanogaster RE17113 full length cDNA Length = 503 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 345 gccgccgcctacacctcgcccctgg 369
>dbj|AK156602.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830032D24 product:Ras interacting protein 1, full insert sequence Length = 3166 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 gctgccttcgcctccgcccct 437 ||||||||||||||||||||| Sbjct: 1070 gctgccttcgcctccgcccct 1050
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 ccgcctcggcgctgccttcgc 427 ||||||||||||||||||||| Sbjct: 3638145 ccgcctcggcgctgccttcgc 3638165
>gb|AY129335.1| Mycobacteriophage Corndog, complete genome Length = 69777 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 acacctcgcgcctgggcctgc 70 ||||||||||||||||||||| Sbjct: 14187 acacctcgcgcctgggcctgc 14207
>dbj|AK033276.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030482D16 product:hypothetical Dilute (DIL) domain containing protein, full insert sequence Length = 2439 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 gctgccttcgcctccgcccct 437 ||||||||||||||||||||| Sbjct: 346 gctgccttcgcctccgcccct 326
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctgctgctgcgccgacgccgc 248 ||||||||||||||||||||| Sbjct: 1302734 ctgctgctgcgccgacgccgc 1302714 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccagctgcctcctcccgcc 176 |||||||||||||||||||| Sbjct: 18499758 gccagctgcctcctcccgcc 18499739
>gb|AE004786.1| Pseudomonas aeruginosa PAO1, section 347 of 529 of the complete genome Length = 10235 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 191 tggccttcgggttgcccgccg 211 ||||||||||||||||||||| Sbjct: 2530 tggccttcgggttgcccgccg 2510
>ref|NM_028544.1| Mus musculus Ras interacting protein 1 (Rasip1), mRNA Length = 3169 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 gctgccttcgcctccgcccct 437 ||||||||||||||||||||| Sbjct: 1058 gctgccttcgcctccgcccct 1038
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 cacgccctggaggaggccgacgccc 408 |||||||||||||||||| |||||| Sbjct: 383378 cacgccctggaggaggcctacgccc 383402
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctgctgctgcgccgacgccgc 248 ||||||||||||||||||||| Sbjct: 67569 ctgctgctgcgccgacgccgc 67549
>dbj|AB007867.1| Homo sapiens KIAA0407 mRNA, partial cds Length = 7308 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ggccgacgcccgcctcggcgc 418 ||||||||||||||||||||| Sbjct: 164 ggccgacgcccgcctcggcgc 184
>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full insert sequence Length = 1440 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctgctgctgcgccgacgccgc 248 ||||||||||||||||||||| Sbjct: 869 ctgctgctgcgccgacgccgc 849
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete sequence Length = 281917 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 171215 gccgccgcctacacctcgcccctgg 171239 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 gccgccgcctacacctcgcgcctgg 64 ||||||||||||||||||| ||||| Sbjct: 151672 gccgccgcctacacctcgcccctgg 151696
>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence Length = 202422 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 gctgccttcgcctccgcccct 437 ||||||||||||||||||||| Sbjct: 30994 gctgccttcgcctccgcccct 30974
>emb|BX293566.5| Mouse DNA sequence from clone RP23-441G5 on chromosome 2, complete sequence Length = 132841 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ttttttccccagctcaaaaga 21 ||||||||||||||||||||| Sbjct: 67989 ttttttccccagctcaaaaga 68009
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 384 cacgccctggaggaggccgacgccc 408 |||||||||||||||||| |||||| Sbjct: 33030 cacgccctggaggaggcctacgccc 33054
>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence Length = 184181 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 cagctcaaaagaaaaatcaagttag 34 |||||||||||||||||||| |||| Sbjct: 78633 cagctcaaaagaaaaatcaaattag 78657
>gb|AC134772.2| Homo sapiens chromosome 3 clone RP13-794C1, complete sequence Length = 177231 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ggccgacgcccgcctcggcgc 418 ||||||||||||||||||||| Sbjct: 42978 ggccgacgcccgcctcggcgc 42958
>gb|U57340.1|MKU57340 Methanopyrus kandleri methyl coenzyme M reductase operon, mcrB, mcrD, mcrC, mcrG and mcrA genes, complete cds, and mtrE gene, partial cds Length = 5914 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 gagatcgacgagttccgggag 345 ||||||||||||||||||||| Sbjct: 1552 gagatcgacgagttccgggag 1572
>dbj|AB024601.1| Pseudomonas aeruginosa dapD gene for tetrahydrodipicolinate N-succinyletransferase, complete cds, strain PAO1 Length = 14807 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tggccttcgggttgcccgccg 211 ||||||||||||||||||||| Sbjct: 5504 tggccttcgggttgcccgccg 5524
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 62041 gaagcggaggttcatggcga 62060
>ref|XM_482535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 969 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 cgccgacgccgcgggggcgcccgcgttc 264 ||||||||| |||| ||||||||||||| Sbjct: 621 cgccgacgcggcggcggcgcccgcgttc 648
>ref|NM_191835.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2430 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcctcggcgctgccttcgcctccg 432 ||||||||||||| |||| ||||||| | |||||||||| Sbjct: 529 gaggaggccgacgaccgcggcggcgctactttcgcctccg 568
>ref|NM_003178.3| Homo sapiens synapsin II (SYN2), transcript variant IIb, mRNA Length = 3899 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ggaggccgacgcccgcctcggcgc 418 |||||||| ||||||||||||||| Sbjct: 341 ggaggccgccgcccgcctcggcgc 364
>ref|NM_133625.2| Homo sapiens synapsin II (SYN2), transcript variant IIa, mRNA Length = 2694 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ggaggccgacgcccgcctcggcgc 418 |||||||| ||||||||||||||| Sbjct: 341 ggaggccgccgcccgcctcggcgc 364
>gb|AC158787.14| Mus musculus chromosome 15, clone RP23-136G8, complete sequence Length = 203772 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgggggcgcccgcgttcccg 267 |||||||||||||||||||| Sbjct: 197138 cgggggcgcccgcgttcccg 197157
>gb|BC019435.1| Mus musculus caldesmon 1, mRNA (cDNA clone MGC:30319 IMAGE:5148205), complete cds Length = 2631 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gctgcgccgacgccgcgggg 252 |||||||||||||||||||| Sbjct: 988 gctgcgccgacgccgcgggg 1007
>gb|BC051307.1| Homo sapiens synapsin II, transcript variant IIa, mRNA (cDNA clone MGC:59674 IMAGE:5802100), complete cds Length = 2682 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ggaggccgacgcccgcctcggcgc 418 |||||||| ||||||||||||||| Sbjct: 329 ggaggccgccgcccgcctcggcgc 352
>ref|XM_882934.1| PREDICTED: Bos taurus hypothetical protein LOC617532 (LOC617532), mRNA Length = 1566 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gggggcgcccgcgttcccgc 268 |||||||||||||||||||| Sbjct: 773 gggggcgcccgcgttcccgc 792
>ref|NM_201359.1| Mus musculus transmembrane protein 106C (Tmem106c), mRNA Length = 1630 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgggggcgcccgcgttcccg 267 |||||||||||||||||||| Sbjct: 61 cgggggcgcccgcgttcccg 80
>gb|AC101984.13| Mus musculus chromosome 10, clone RP24-352K10, complete sequence Length = 167874 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 agaagacttctctgatgatc 495 |||||||||||||||||||| Sbjct: 7570 agaagacttctctgatgatc 7551
>ref|XM_536913.2| PREDICTED: Canis familiaris similar to HIRA interacting protein 3 (LOC479786), mRNA Length = 2781 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cagctgcctcctcccgccgc 178 |||||||||||||||||||| Sbjct: 1931 cagctgcctcctcccgccgc 1912
>emb|AL450304.33| Human DNA sequence from clone RP11-505O17 on chromosome 1 Contains the 5' end of a gene for a novel protein, a processed pseudogene similar to natural cytotoxicity triggering receptor 1 (NCR1), a processed pseudogene similar to keratin 18 (KRT18), the 5' end of the LAMC1 for laminin, gamma 1 (formerly LAMB2) and CpG island, complete sequence Length = 172837 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ctcctcccgccgcccgagct 185 |||||||||||||||||||| Sbjct: 19350 ctcctcccgccgcccgagct 19369
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ctggccttcgggttgcccgccggc 213 ||||||||||| |||||||||||| Sbjct: 2288471 ctggccttcggcttgcccgccggc 2288448
>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence Length = 181705 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccagctgcctcctcccgcc 176 |||||||||||||||||||| Sbjct: 36307 gccagctgcctcctcccgcc 36288
>gb|AC091535.2| Takifugu rubripes clone 241F4, complete sequence Length = 71409 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gagctgccgctggccttcgg 200 |||||||||||||||||||| Sbjct: 45647 gagctgccgctggccttcgg 45666
>emb|Y13383.2|BPHYPLCRD Bordetella pertussis DNA for putative pathogenicity island coding for type III secretion system and flanking house keeping genes Length = 35026 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcct 412 |||||||||||||||||||| Sbjct: 17401 gaggaggccgacgcccgcct 17420
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcct 412 |||||||||||||||||||| Sbjct: 335717 gaggaggccgacgcccgcct 335736
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcct 412 |||||||||||||||||||| Sbjct: 281193 gaggaggccgacgcccgcct 281212
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 gaggaggccgacgcccgcct 412 |||||||||||||||||||| Sbjct: 292146 gaggaggccgacgcccgcct 292127
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gccgacgcccgcctcggcgc 418 |||||||||||||||||||| Sbjct: 231790 gccgacgcccgcctcggcgc 231809
>gb|AC084083.10| Homo sapiens chromosome 8, clone RP11-550A5, complete sequence Length = 209859 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaaagaaaaatcaagttagc 35 |||||||||||||||||||| Sbjct: 56951 aaaagaaaaatcaagttagc 56932
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cctggaggaggccgacgccc 408 |||||||||||||||||||| Sbjct: 21107 cctggaggaggccgacgccc 21088
>ref|NM_145575.1| Mus musculus caldesmon 1 (Cald1), mRNA Length = 2631 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gctgcgccgacgccgcgggg 252 |||||||||||||||||||| Sbjct: 988 gctgcgccgacgccgcgggg 1007
>dbj|AK148009.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270138C06 product:caldesmon 1, full insert sequence Length = 3404 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gctgcgccgacgccgcgggg 252 |||||||||||||||||||| Sbjct: 401 gctgcgccgacgccgcgggg 420
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence Length = 198264 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ggaggccgacgcccgcctcggcgc 418 |||||||| ||||||||||||||| Sbjct: 110400 ggaggccgccgcccgcctcggcgc 110423
>gb|AC024579.5| Homo sapiens chromosome 5 clone CTD-2582M21, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 agaagacttctctgatgatctgca 499 |||| ||||||||||||||||||| Sbjct: 129741 agaaaacttctctgatgatctgca 129764
>gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, complete sequence Length = 133790 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 agaagacttctctgatgatctgca 499 |||| ||||||||||||||||||| Sbjct: 117670 agaaaacttctctgatgatctgca 117647
>gb|AC153869.7| Mus musculus 6 BAC RP23-386A17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222826 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gctgcgccgacgccgcgggg 252 |||||||||||||||||||| Sbjct: 10594 gctgcgccgacgccgcgggg 10613
>gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5, complete sequence Length = 203043 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 agaagacttctctgatgatctgca 499 |||| ||||||||||||||||||| Sbjct: 17401 agaaaacttctctgatgatctgca 17424
>emb|CR338694.1| Gallus gallus finished cDNA, clone ChEST40l18 Length = 1030 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 tccgggaggtggagtcggag 357 |||||||||||||||||||| Sbjct: 122 tccgggaggtggagtcggag 141
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 1660020 gaagcggaggttcatggcga 1660039
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 1707034 gaagcggaggttcatggcga 1707053
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 cgccgacgccgcgggggcgcccgcgttc 264 ||||||||| |||| ||||||||||||| Sbjct: 20924500 cgccgacgcggcggcggcgcccgcgttc 20924527
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 cgcccgcctcggcgctgccttcgcctcc 431 ||||||||||| ||| |||||||||||| Sbjct: 12277134 cgcccgcctcgccgccgccttcgcctcc 12277161
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 cgccgacgccgcgggggcgcccgc 260 |||||||||||||| ||||||||| Sbjct: 3189607 cgccgacgccgcggcggcgcccgc 3189630
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcctcggcgctgccttcgcctccg 432 ||||||||||||| |||| ||||||| | |||||||||| Sbjct: 30252075 gaggaggccgacgaccgcggcggcgctactttcgcctccg 30252114
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcctcggcgctgccttcgcctccg 432 ||||||||||||| |||| ||||||| | |||||||||| Sbjct: 40394 gaggaggccgacgaccgcggcggcgctactttcgcctccg 40433
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cccgccgcccgagctgccgc 190 |||||||||||||||||||| Sbjct: 2346708 cccgccgcccgagctgccgc 2346727
>gb|BC046621.1| Mus musculus transmembrane protein 106C, mRNA (cDNA clone MGC:54819 IMAGE:6308771), complete cds Length = 1630 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgggggcgcccgcgttcccg 267 |||||||||||||||||||| Sbjct: 61 cgggggcgcccgcgttcccg 80
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 cgccgacgccgcgggggcgcccgcgttc 264 ||||||||| |||| ||||||||||||| Sbjct: 102801 cgccgacgcggcggcggcgcccgcgttc 102828
>dbj|AK197986.1| Mus musculus cDNA, clone:Y1G0126M09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000064200, based on BLAT search Length = 273 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgggggcgcccgcgttcccg 267 |||||||||||||||||||| Sbjct: 37 cgggggcgcccgcgttcccg 56
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gccgacgcccgcctcggcgc 418 |||||||||||||||||||| Sbjct: 971582 gccgacgcccgcctcggcgc 971601
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592B08 Length = 131096 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 cgcccgcctcggcgctgccttcgcctcc 431 ||||||||||| ||| |||||||||||| Sbjct: 114156 cgcccgcctcgccgccgccttcgcctcc 114183
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 cgccgacgccgcgggggcgcccgc 260 |||||||||||||| ||||||||| Sbjct: 117761 cgccgacgccgcggcggcgcccgc 117784
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 cgccgacgccgcgggggcgcccgc 260 |||||||||||||| ||||||||| Sbjct: 61794 cgccgacgccgcggcggcgcccgc 61817
>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1457_D07 Length = 103688 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccagctgcctcctcccgcc 176 |||||||||||||||||||| Sbjct: 28514 gccagctgcctcctcccgcc 28495
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_B11 Length = 102824 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gccagctgcctcctcccgcc 176 |||||||||||||||||||| Sbjct: 91606 gccagctgcctcctcccgcc 91587
>dbj|AK103181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121I24, full insert sequence Length = 2233 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 434 gaagcggaggttcatggcga 415
>dbj|AK101974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076N16, full insert sequence Length = 3427 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcctcggcgctgccttcgcctccg 432 ||||||||||||| |||| ||||||| | |||||||||| Sbjct: 1068 gaggaggccgacgaccgcggcggcgctactttcgcctccg 1107
>dbj|AK101600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051I20, full insert sequence Length = 1856 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 cgcccgcctcggcgctgccttcgcctcc 431 ||||||||||| ||| |||||||||||| Sbjct: 227 cgcccgcctcgccgccgccttcgcctcc 254
>dbj|AK067233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B21, full insert sequence Length = 2039 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 cgcccgcctcggcgctgccttcgcctcc 431 ||||||||||| ||| |||||||||||| Sbjct: 211 cgcccgcctcgccgccgccttcgcctcc 238
>dbj|AK063441.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E12, full insert sequence Length = 1642 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 393 gaggaggccgacgcccgcctcggcgctgccttcgcctccg 432 ||||||||||||| |||| ||||||| | |||||||||| Sbjct: 613 gaggaggccgacgaccgcggcggcgctactttcgcctccg 652
>gb|AC153627.2| Mus musculus 6 BAC RP23-104H13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198060 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 gctgcgccgacgccgcgggg 252 |||||||||||||||||||| Sbjct: 70269 gctgcgccgacgccgcgggg 70250
>gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, complete sequence Length = 172721 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 agaagacttctctgatgatc 495 |||||||||||||||||||| Sbjct: 12482 agaagacttctctgatgatc 12501
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gcctcggcgctgccttcgcc 428 |||||||||||||||||||| Sbjct: 1447777 gcctcggcgctgccttcgcc 1447796
>gb|U40215.1|HSU40215 Human synapsin IIb mRNA, complete cds Length = 2074 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ggaggccgacgcccgcctcggcgc 418 |||||||| ||||||||||||||| Sbjct: 235 ggaggccgccgcccgcctcggcgc 258
>gb|AC134554.6| Mus musculus BAC clone RP24-313F7 from chromosome 15, complete sequence Length = 148029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cgggggcgcccgcgttcccg 267 |||||||||||||||||||| Sbjct: 108009 cgggggcgcccgcgttcccg 108028
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 1704755 gaagcggaggttcatggcga 1704774
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 1660000 gaagcggaggttcatggcga 1660019
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gaagcggaggttcatggcga 538 |||||||||||||||||||| Sbjct: 32904 gaagcggaggttcatggcga 32885
>dbj|AB209088.1| Homo sapiens mRNA for synapsin II isoform IIb variant protein Length = 3835 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 ggaggccgacgcccgcctcggcgc 418 |||||||| ||||||||||||||| Sbjct: 289 ggaggccgccgcccgcctcggcgc 312
>gb|AF179296.2| Homo sapiens chromosome 8 clone RP4-678C5 map 8q24.2, complete sequence Length = 123529 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 aaaagaaaaatcaagttagc 35 |||||||||||||||||||| Sbjct: 15918 aaaagaaaaatcaagttagc 15937
>gb|AC104431.2| Homo sapiens chromosome 8 clone RP11-550A5 map 8q24.2, complete sequence Length = 209870 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 aaaagaaaaatcaagttagc 35 |||||||||||||||||||| Sbjct: 152909 aaaagaaaaatcaagttagc 152928 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,496,651 Number of Sequences: 3902068 Number of extensions: 4496651 Number of successful extensions: 100009 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98007 Number of HSP's gapped (non-prelim): 2002 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
