ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart33g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA 54 5e-04
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
3dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
4ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predic... 48 0.033
5gb|BT016442.1| Zea mays clone Contig275 mRNA sequence 48 0.033
6gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence 48 0.033
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.033
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
9emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 48 0.033
10dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
11gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
12gb|BT016654.1| Zea mays clone Contig487 mRNA sequence 46 0.13
13gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence 46 0.13
14gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence 46 0.13
15gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 44 0.51
16gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.51
17gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 44 0.51
18gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, com... 42 2.0
19gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 2.0
20gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 2.0
21dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AK101485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
23gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 2.0
24gb|AC156036.4| Mus musculus BAC clone RP23-341B16 from chromosom... 40 7.9
25ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
26ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
27ref|XM_470761.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.9
28gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 geno... 40 7.9
29gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.9
30dbj|AK127069.1| Homo sapiens cDNA FLJ45126 fis, clone BRAWH3036738 40 7.9
31dbj|AB224684.1| Aspergillus oryzae cDNA, contig sequence: AoEST1533 40 7.9
32dbj|AB223297.1| Aspergillus oryzae cDNA, contig sequence: AoEST0128 40 7.9
33dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 7.9
34gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, co... 40 7.9
35ref|XM_694831.1| PREDICTED: Danio rerio similar to fibronectin t... 40 7.9
36gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.9
37dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
38dbj|AB180798.1| Actinobacterium Aac-15 gene for DNA gyrase subun... 40 7.9
39emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene 40 7.9
40dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
41dbj|AK069332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
42dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
43gb|AY105507.1| Zea mays PCO119884 mRNA sequence 40 7.9
44gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete seq... 40 7.9
45gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.9
46gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.9
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
48emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134... 40 7.9
49emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005... 40 7.9 
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1209

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 523 acggcggcgtgcaggacggcaccaccgtcgt 553
           ||||||||||||| |||||||||||||||||
Sbjct: 430 acggcggcgtgcacgacggcaccaccgtcgt 460



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 514  acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
            |||| ||| |||||||||| || |||||||||||||||||
Sbjct: 1109 acaaggaccacggcggcgtccacgacggcaccaccgtcgt 1148
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 523      acggcggcgtgcaggacggcaccaccgtcgt 553
                ||||||||||||| |||||||||||||||||
Sbjct: 28939819 acggcggcgtgcacgacggcaccaccgtcgt 28939849



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 514      acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
                |||| ||| |||||||||| || |||||||||||||||||
Sbjct: 28940812 acaaggaccacggcggcgtccacgacggcaccaccgtcgt 28940851



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 514      acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
                |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 28951335 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 28951374
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>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 523   acggcggcgtgcaggacggcaccaccgtcgt 553
             ||||||||||||| |||||||||||||||||
Sbjct: 57356 acggcggcgtgcacgacggcaccaccgtcgt 57386



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 514   acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
             |||| ||| |||||||||| || |||||||||||||||||
Sbjct: 58349 acaaggaccacggcggcgtccacgacggcaccaccgtcgt 58388



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 514   acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
             |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 68872 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 68911
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>ref|NM_187532.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1122

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 446 acaaggaccacggcggcgtgcacgacggcaccaccatcgt 485



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
           |||||||||||| | ||||||||||  |||||||| ||| |||||||
Sbjct: 863 tgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgc 909



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgcgcgctgaacaa 496
           |||||||||||| ||||||||| ||| |  ||||| ||| |||||||  |||||||||
Sbjct: 356 tgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaa 413
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>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence
          Length = 1443

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| ||||||||||||| ||||||||| |||||||
Sbjct: 477 acaaggaccacggcggcgtgcacgacggcaccgccgtcgt 516
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>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence
          Length = 778

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 523 acggcggcgtgcaggacggcaccaccgt 550
           ||||||||||||| ||||||||||||||
Sbjct: 609 acggcggcgtgcacgacggcaccaccgt 636



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
           |||||||||||| ||||||||| ||| | |||||| ||| |||||||
Sbjct: 510 tgtggacggagagcggcgacgtgggcaagggcttccgctgcatccgc 556
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 514      acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
                |||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 11932062 acaaggaccacggcggcgtgcacgacggcaccaccatcgt 11932023



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 439      tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
                |||||||||||| | ||||||||||  |||||||| ||| |||||||
Sbjct: 11931536 tgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgc 11931490



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 439      tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgcgcgctgaacaa 496
                |||||||||||| ||||||||| ||| |  ||||| ||| |||||||  |||||||||
Sbjct: 11932152 tgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaa 11932095



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 245      cggcgacgagcgccaggagc 264
                ||||||||||||||||||||
Sbjct: 14940560 cggcgacgagcgccaggagc 14940541
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 514      acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
                |||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 11928825 acaaggaccacggcggcgtgcacgacggcaccaccatcgt 11928786



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 439      tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
                |||||||||||| | ||||||||||  |||||||| ||| |||||||
Sbjct: 11928299 tgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgc 11928253



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 439      tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgcgcgctgaacaa 496
                |||||||||||| ||||||||| ||| |  ||||| ||| |||||||  |||||||||
Sbjct: 11928915 tgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaa 11928858



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 245      cggcgacgagcgccaggagc 264
                ||||||||||||||||||||
Sbjct: 14935094 cggcgacgagcgccaggagc 14935075
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>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1
          Length = 1458

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 508 acaaggaccacggcggcgtgcacgacggcaccaccatcgt 547



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
           |||||||||||| | ||||||||||  |||||||| ||| |||||||
Sbjct: 925 tgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgc 971
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>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full
           insert sequence
          Length = 1765

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 521 acaaggaccacggcggcgtgcacgacggcaccaccatcgt 560



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
           |||||||||||| | ||||||||||  |||||||| ||| |||||||
Sbjct: 938 tgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgc 984



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgcgcgctgaacaa 496
           |||||||||||| ||||||||| ||| |  ||||| ||| |||||||  |||||||||
Sbjct: 431 tgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaa 488
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 514   acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
             |||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 33324 acaaggaccacggcggcgtgcacgacggcaccaccatcgt 33285



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 439   tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgc 485
             |||||||||||| | ||||||||||  |||||||| ||| |||||||
Sbjct: 32798 tgtggacggagagccgcgacgtcgggcacggcttccgctgcatccgc 32752



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 439   tgtggacggagaccggcgacgtcggcgacggcttcagctacatccgcgcgctgaacaa 496
             |||||||||||| ||||||||| ||| |  ||||| ||| |||||||  |||||||||
Sbjct: 33414 tgtggacggagagcggcgacgtgggcaagagcttccgctgcatccgcatgctgaacaa 33357
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>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence
          Length = 905

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttc 473
           |||||||||||| | ||||||||||| ||||||||
Sbjct: 375 tgtggacggagagccgcgacgtcggccacggcttc 409
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>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence
          Length = 666

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttc 473
           |||||||||||| | ||||||||||| ||||||||
Sbjct: 252 tgtggacggagagccgcgacgtcggcaacggcttc 286
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>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence
          Length = 567

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 439 tgtggacggagaccggcgacgtcggcgacggcttc 473
           |||||||||||| | ||||||||||| ||||||||
Sbjct: 59  tgtggacggagaaccgcgacgtcggccacggcttc 93
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 485     cgcgctgaacaagaccaacacccgcc 510
               |||||||||||||||||||| |||||
Sbjct: 2114152 cgcgctgaacaagaccaacagccgcc 2114177
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 485     cgcgctgaacaagaccaacacccgcc 510
               |||||||||||||||||||| |||||
Sbjct: 4152362 cgcgctgaacaagaccaacagccgcc 4152337
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 485     cgcgctgaacaagaccaacacccgcc 510
               |||||||||||||||||||| |||||
Sbjct: 3942539 cgcgctgaacaagaccaacagccgcc 3942514
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>gb|AC124333.13| Mus musculus chromosome 1, clone RP24-511E9, complete sequence
          Length = 185857

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   tgtgagcaaggccagcagcct 349
             |||||||||||||||||||||
Sbjct: 89322 tgtgagcaaggccagcagcct 89302
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 203    gtccgtcctcgacggcaacgtcctcctcg 231
              |||| ||||||||||| ||||||||||||
Sbjct: 641687 gtccatcctcgacggccacgtcctcctcg 641715



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 210     ctcgacggcaacgtcctcctcgcc 233
               |||||||||| |||||||||||||
Sbjct: 1374221 ctcgacggcaccgtcctcctcgcc 1374198
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 326     ccttgtgagcaaggccagcag 346
               |||||||||||||||||||||
Sbjct: 6908919 ccttgtgagcaaggccagcag 6908939
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 242      ccccggcgacgagcgccaggagcag 266
                ||||||||||||||||||| |||||
Sbjct: 18953806 ccccggcgacgagcgccagcagcag 18953782
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>dbj|AK101485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041K01, full
           insert sequence
          Length = 1859

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 242 ccccggcgacgagcgccaggagcag 266
           ||||||||||||||||||| |||||
Sbjct: 171 ccccggcgacgagcgccagcagcag 147
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 518     tgacgacggcggcgtgcaggacggc 542
               ||||||||||||||||| |||||||
Sbjct: 2250696 tgacgacggcggcgtgctggacggc 2250720
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>gb|AC156036.4| Mus musculus BAC clone RP23-341B16 from chromosome 12, complete sequence
          Length = 211424

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    cccgccttctaccttgtgag 334
              ||||||||||||||||||||
Sbjct: 116428 cccgccttctaccttgtgag 116447
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>ref|XM_479572.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1239

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 284 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 323
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>ref|XM_479571.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1511

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 499 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 538
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>ref|XM_470761.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1375

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 cggcgacgagcgccaggagc 264
           ||||||||||||||||||||
Sbjct: 55  cggcgacgagcgccaggagc 74
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>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete
              sequence
          Length = 137184

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    cggcgacgagcgccaggagc 264
              ||||||||||||||||||||
Sbjct: 102202 cggcgacgagcgccaggagc 102221
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 130     gcgccatgtccggattcggc 149
               ||||||||||||||||||||
Sbjct: 5211484 gcgccatgtccggattcggc 5211503
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>dbj|AK127069.1| Homo sapiens cDNA FLJ45126 fis, clone BRAWH3036738
          Length = 3882

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  tgtgagcaaggccagcagcc 348
            ||||||||||||||||||||
Sbjct: 1589 tgtgagcaaggccagcagcc 1570
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>dbj|AB224684.1| Aspergillus oryzae cDNA, contig sequence: AoEST1533
          Length = 558

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 213 gacggcaacgtcctcctcgccccttccg 240
           |||||||||||||| ||||||| |||||
Sbjct: 166 gacggcaacgtccttctcgccctttccg 193
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>dbj|AB223297.1| Aspergillus oryzae cDNA, contig sequence: AoEST0128
          Length = 445

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 213 gacggcaacgtcctcctcgccccttccg 240
           |||||||||||||| ||||||| |||||
Sbjct: 86  gacggcaacgtccttctcgccctttccg 113
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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 213     gacggcaacgtcctcctcgccccttccg 240
               |||||||||||||| ||||||| |||||
Sbjct: 1191887 gacggcaacgtccttctcgccctttccg 1191860
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>gb|AC016168.18| Homo sapiens chromosome 17, clone RP11-87G24, complete sequence
          Length = 193537

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    tcctcgccccttccgacccc 245
              ||||||||||||||||||||
Sbjct: 145776 tcctcgccccttccgacccc 145757
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>ref|XM_694831.1| PREDICTED: Danio rerio similar to fibronectin type III domain
           containing 3a (LOC571259), partial mRNA
          Length = 695

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 494 caagaccaacacccgcctca 513
           ||||||||||||||||||||
Sbjct: 116 caagaccaacacccgcctca 97
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 451     ccggcgacgtcggcgacggc 470
               ||||||||||||||||||||
Sbjct: 2122780 ccggcgacgtcggcgacggc 2122799
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 512     caacaatgacgacggcggcg 531
               ||||||||||||||||||||
Sbjct: 9164640 caacaatgacgacggcggcg 9164659
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>dbj|AB180798.1| Actinobacterium Aac-15 gene for DNA gyrase subunit B, partial cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 298 aggacgatgagggcaaccccgcct 321
           ||||||| ||||||||||||||||
Sbjct: 320 aggacgaggagggcaaccccgcct 343
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>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene
          Length = 2101

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 514  acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
            |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 1262 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 1301
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>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full
           insert sequence
          Length = 1512

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 499 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 538
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>dbj|AK069332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010L17, full
           insert sequence
          Length = 1375

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 245 cggcgacgagcgccaggagc 264
           ||||||||||||||||||||
Sbjct: 56  cggcgacgagcgccaggagc 75
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>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full
           insert sequence
          Length = 1239

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 514 acaatgacgacggcggcgtgcaggacggcaccaccgtcgt 553
           |||| ||| |||||||||| |  |||||||||||||||||
Sbjct: 284 acaaggaccacggcggcgtccgcgacggcaccaccgtcgt 323
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>gb|AY105507.1| Zea mays PCO119884 mRNA sequence
          Length = 1145

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 519 gacgacggcggcgtgcaggacggc 542
           ||||||||||||| ||||||||||
Sbjct: 115 gacgacggcggcgagcaggacggc 92
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>gb|AC005071.2|AC005071 Homo sapiens clone RG161A02, complete sequence
          Length = 209382

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tgtgagcaaggccagcagcc 348
             ||||||||||||||||||||
Sbjct: 13256 tgtgagcaaggccagcagcc 13275
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     gcgcatcggcgccccgatcc 297
               ||||||||||||||||||||
Sbjct: 1539149 gcgcatcggcgccccgatcc 1539168
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 443     gacggagaccggcgacgtcg 462
               ||||||||||||||||||||
Sbjct: 2000769 gacggagaccggcgacgtcg 2000750
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 512     caacaatgacgacggcggcg 531
               ||||||||||||||||||||
Sbjct: 9164525 caacaatgacgacggcggcg 9164544
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>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121600

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   caacaatgacgacggcggcg 531
             ||||||||||||||||||||
Sbjct: 42205 caacaatgacgacggcggcg 42186
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>emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005_C11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104533

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 512   caacaatgacgacggcggcg 531
             ||||||||||||||||||||
Sbjct: 20530 caacaatgacgacggcggcg 20549


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,497,565
Number of Sequences: 3902068
Number of extensions: 3497565
Number of successful extensions: 67464
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66394
Number of HSP's gapped (non-prelim): 1070
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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