Clone Name | bart33e11 |
---|---|
Clone Library Name | barley_pub |
>AFF1_MOUSE (O88573) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)| Length = 1217 Score = 31.6 bits (70), Expect = 0.95 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +2 Query: 143 PPRARSSHQHSTTAPVAPRNAGVQAGMRADDAGRPDSSHAGAQKPAELPS 292 PPR+ SS + S+T P AP++ VQA R + A A P +PS Sbjct: 903 PPRSASSTKSSSTDPPAPKHRKVQA--RGSEHKGSSGDAANAANPFPVPS 950
>ZN406_MOUSE (Q7TS63) Zinc finger protein 406| Length = 1219 Score = 30.8 bits (68), Expect = 1.6 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 3/92 (3%) Frame = +2 Query: 134 SAFPP---RARSSHQHSTTAPVAPRNAGVQAGMRADDAGRPDSSHAGAQKPAELPSPHME 304 SA PP A S QH +A + P+SS G QK LP+ Sbjct: 598 SAEPPAAAEATSDTQHRDSAQTQGEEVTLLLAKAKSAGPDPESSPGGRQKVGALPA---- 653 Query: 305 SVCENTTTADFKQSNFSNFLPSVRSGGWSDIG 400 S +++T + S+ LP+V GG D+G Sbjct: 654 SESDSSTCLRANPTEASDLLPTVTDGG--DLG 683
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 995 Score = 30.4 bits (67), Expect = 2.1 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +2 Query: 173 STTAPVAPRNAGVQAGMRADDAGRPDSSHAGAQKPAELPSPH 298 S+ +P APR V+A + G Q P+ PSPH Sbjct: 458 SSESPAAPRTIKVEAAEEPEATRASGPGEPGPQAPSRTPSPH 499
>ASTL_HUMAN (Q6HA08) Astacin-like metalloendopeptidase precursor (EC 3.4.-.-)| (Oocyte astacin) (Ovastacin) Length = 431 Score = 30.4 bits (67), Expect = 2.1 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 6/57 (10%) Frame = +2 Query: 146 PRARSSHQHSTTAPVAPRNAGVQAGMRADDAGR----PDSSHAGAQKPAELP--SPH 298 PR R SH HST AP + +Q + A A P S AG Q P SPH Sbjct: 288 PRGRGSHAHSTGKSPAPASLSLQRLLEALSAESRSPDPSGSSAGGQPVPAGPGESPH 344
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Frame = +2 Query: 143 PPRARSSHQHSTTAPVA---PRNAGVQAGMRADDAGRPDSSHAGAQKPAELPSPHMES 307 P R S+H ST++ PR D + R SSHA + P + H+ S Sbjct: 196 PARCSSTHSQSTSSSSPSSPPRKRARSRSASQDSSARSSSSHASPRSPTPRTTSHVAS 253
>MYC2_SPEBE (Q64210) N-myc 2 proto-oncogene protein| Length = 454 Score = 29.6 bits (65), Expect = 3.6 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = +2 Query: 137 AFPPRARSSHQHSTTAPVAPRNAGVQAGMRADDAGRPDSSHAGAQKPAELPSPHMESV 310 A + + H+ + T P V A AGR S AGA PAEL P E V Sbjct: 130 AMSEKMQHGHEPAATGPATQ----VPGAGAASTAGRGHSGTAGAALPAELAHPAAECV 183
>MYC2_MARMO (P20389) N-myc 2 proto-oncogene protein| Length = 454 Score = 29.6 bits (65), Expect = 3.6 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = +2 Query: 137 AFPPRARSSHQHSTTAPVAPRNAGVQAGMRADDAGRPDSSHAGAQKPAELPSPHMESV 310 A + + H+ + T P V A AGR S AGA PAEL P E V Sbjct: 130 AMSEKMQHGHEPAATGPATQ----VPGAGAASPAGRGHSGTAGAALPAELAHPAAECV 183
>DD31_DICDI (Q02465) Prespore protein Dd31| Length = 269 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 260 AGAQKPAELPSPHMESVCENTTTADFKQSNFSNFLPSVRSGGWSDIGSRQYME 418 A Q A++ PH+ V TA +Q+NF + P +R DI R+Y + Sbjct: 57 ANNQSAADITGPHV--VVPAPATAHPRQANFPSSYPMIRLNLEEDIAIREYRQ 107
>ACDA1_METKA (Q8TXF7) Acetyl-CoA decarbonylase/synthase complex alpha subunit 1| (EC 1.2.99.2) (ACDS complex alpha subunit 1) (ACDS complex carbon monoxide dehydrogenase 1) (ACDS CODH 1) Length = 760 Score = 28.9 bits (63), Expect = 6.2 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = -2 Query: 367 WKEIAEVTLLEIGSCGVLTNTLHMXXXXXXXXXRSGVARIGPPGVVRAHAGL 212 +KEIA+ L IG+CGVL T+ +G R G P +V AGL Sbjct: 586 FKEIADYILNRIGACGVLWGTM----SQKALAISTGFTRWGIP-IVYGPAGL 632
>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)| Length = 586 Score = 28.5 bits (62), Expect = 8.1 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Frame = +2 Query: 125 LPLSAFPPRARSSHQHSTTAPVAPRNAGVQAGMRADDAGRPDS---SHAGAQKPAELPSP 295 LP P + SS S+++ AP+ G D + +S + A PA+ P P Sbjct: 478 LPSGPSLPSSSSSSSSSSSSSSAPQRPGGPTTTHGDASSSSNSLAEAQAPQAAPAQKPQP 537 Query: 296 HMESVCENTTTADFKQSNFSNFLPS 370 H + + T F S S F S Sbjct: 538 HPQLNKSQSLTNAFSFSESSFFRSS 562
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 28.5 bits (62), Expect = 8.1 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Frame = +2 Query: 128 PLSAFPPRARSSHQHSTTAPVAPRNAGVQAGMRADDAGRPDSSHAGAQ----KPAELPSP 295 P + PP + SS S++AP P DA SS A AQ P + P P Sbjct: 479 PGPSLPPSSSSSSSSSSSAPQRPGGPTTHG-----DAPSSSSSLAEAQPPLAAPPQKPQP 533 Query: 296 HMESVCENTTTADFKQSNFSNFLPS 370 H + + T F S S F S Sbjct: 534 HPQLNKSQSLTNAFSFSESSFFRSS 558
>YTHD2_HUMAN (Q9Y5A9) YTH domain protein 2 (High-glucose-regulated protein 8)| (NY-REN-2 antigen) (CLL-associated antigen KW-14) Length = 579 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = +2 Query: 128 PLSAFPPR-ARSSHQHSTTAP---VAPRNAGVQAGMRADDAGRPDSSHAGAQKPAELPSP 295 PL PP+ A+ S Q P VAPRN G G D S AG+ P P Sbjct: 328 PLPPPPPQPAQLSVQQQAAQPTRWVAPRNRGSGFGHNGVDGNGVGQSQAGSGSTPSEPHP 387 Query: 296 HMESV 310 +E + Sbjct: 388 VLEKL 392
>UL24_HHV11 (P10208) Protein UL24| Length = 269 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = +2 Query: 179 TAPVAPRNAGVQ---AGMRADDAGRPDSSHAGAQKPAELPSPHMESVCENTTTAD 334 T P+ PR + G A RP SH+GA+ P E + + + T+ + Sbjct: 188 TVPIEPRTQRARRRRGGAARGSASRPKRSHSGARDPPESAARQLPPADQTPTSTE 242 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,354,339 Number of Sequences: 219361 Number of extensions: 786174 Number of successful extensions: 2824 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2713 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2822 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)