ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart33e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
2ref|XM_476319.1| Oryza sativa (japonica cultivar-group), predic... 78 3e-11
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
4dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
5dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
6ref|NM_190685.1| Oryza sativa (japonica cultivar-group), predic... 46 0.098
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
8dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
9dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
10dbj|AK107493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.098
11gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosom... 42 1.5
12gb|AC121572.2| Mus musculus BAC clone RP23-234P16 from 5, comple... 42 1.5
13ref|NM_007227.3| Homo sapiens G protein-coupled receptor 45 (GPR... 42 1.5
14gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.5
15gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, comple... 42 1.5
16gb|AF118266.1|AF118266 Homo sapiens orphan G protein-coupled rec... 42 1.5
17ref|NM_213511.1| Danio rerio acetylserotonin O-methyltransferase... 40 6.0
18ref|XM_369330.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 6.0
19gb|BC055218.1| Danio rerio acetylserotonin O-methyltransferase-l... 40 6.0
20gb|AC126258.4| Mus musculus BAC clone RP23-325B8 from chromosome... 40 6.0
21gb|AC104644.3| Homo sapiens chromosome 3 clone RP11-281N1, compl... 40 6.0
22emb|AL133379.3| Human DNA sequence from clone RP1-230I3 on chrom... 40 6.0
23gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome... 40 6.0
24gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, compl... 40 6.0
25gb|AC124046.2| Homo sapiens chromosome 3 clone RP11-352B8, compl... 40 6.0
26emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, ... 40 6.0
27emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in ... 40 6.0
28gb|AC104633.2| Homo sapiens chromosome 3 clone RP11-118O11, comp... 40 6.0
29ref|XM_697594.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.0
30dbj|AK030297.1| Mus musculus 11 days pregnant adult female ovary... 40 6.0
31dbj|AK030277.1| Mus musculus 11 days pregnant adult female ovary... 40 6.0
32dbj|AB059397.2| Mus musculus OUT gene for basic helix-loop-helix... 40 6.0
33gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, comple... 40 6.0
34dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
35dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
36dbj|AK119501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
37gb|AF142405.1|AF142405 Mus musculus basic helix-loop-helix trans... 40 6.0
38gb|AC109608.14| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 6.0
39gb|AC109606.11| Mus musculus strain C57BL/6J chromosome 5 clone ... 40 6.0
40ref|NM_053085.1| Mus musculus transcription factor 23 (Tcf23), mRNA 40 6.0
41emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chro... 40 6.0 
>dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O16, full
           insert sequence
          Length = 1713

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 143/175 (81%)
 Strand = Plus / Plus

                                                                       
Query: 275 cccgccgagctcccctcgcctcatatggagagtgtttgtgagaacaccacaactgccgat 334
           |||| ||| |||||||||||||  ||||| || |||||||||||||| ||| |||| |||
Sbjct: 344 cccgacgaactcccctcgcctcggatggaaagagtttgtgagaacactacagctgctgat 403

                                                                       
Query: 335 ttcaagcagagtaacttcagcaatttccttccaagtgttagatcaggcggttggtcagat 394
           |||||||| | ||| |   | |||||  | |||| | || |||| || | |||||| |||
Sbjct: 404 ttcaagcaaaataagtctggtaattttgtcccaaatattcgatctggggattggtcggat 463

                                                                  
Query: 395 attggaagccgccagtacatggaagatacccatgtgtgtattgccgacctagcta 449
           |||||| | || || ||||||||||||||||||||||||||| | ||||||||||
Sbjct: 464 attggaggtcgtcaatacatggaagatacccatgtgtgtattactgacctagcta 518
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>ref|XM_476319.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1167

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 123/151 (81%)
 Strand = Plus / Plus

                                                                       
Query: 299 atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 358
           ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| |   | |||
Sbjct: 202 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 261

                                                                       
Query: 359 ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 418
           ||  | |||| | || |||| || | |||||| ||||||||| | || || |||||||||
Sbjct: 262 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 321

                                          
Query: 419 gatacccatgtgtgtattgccgacctagcta 449
           |||||||||||||||||| | ||||||||||
Sbjct: 322 gatacccatgtgtgtattactgacctagcta 352
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 123/151 (81%)
 Strand = Plus / Minus

                                                                           
Query: 299     atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 358
               ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| |   | |||
Sbjct: 3961082 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 3961023

                                                                           
Query: 359     ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 418
               ||  | |||| | || |||| || | |||||| ||||||||| | || || |||||||||
Sbjct: 3961022 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 3960963

                                              
Query: 419     gatacccatgtgtgtattgccgacctagcta 449
               |||||||||||||||||| | ||||||||||
Sbjct: 3960962 gatacccatgtgtgtattactgacctagcta 3960932



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 213      aggccggcatgcgcgcggacgacgccgg 240
                ||||||||  ||||||||||||||||||
Sbjct: 23996643 aggccggccggcgcgcggacgacgccgg 23996616
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>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBb0019L07
          Length = 131650

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 123/151 (81%)
 Strand = Plus / Minus

                                                                        
Query: 299  atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 358
            ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| |   | |||
Sbjct: 4737 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 4678

                                                                        
Query: 359  ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 418
            ||  | |||| | || |||| || | |||||| ||||||||| | || || |||||||||
Sbjct: 4677 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 4618

                                           
Query: 419  gatacccatgtgtgtattgccgacctagcta 449
            |||||||||||||||||| | ||||||||||
Sbjct: 4617 gatacccatgtgtgtattactgacctagcta 4587
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 123/151 (81%)
 Strand = Plus / Minus

                                                                         
Query: 299   atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 358
             ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| |   | |||
Sbjct: 66958 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 66899

                                                                         
Query: 359   ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 418
             ||  | |||| | || |||| || | |||||| ||||||||| | || || |||||||||
Sbjct: 66898 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 66839

                                            
Query: 419   gatacccatgtgtgtattgccgacctagcta 449
             |||||||||||||||||| | ||||||||||
Sbjct: 66838 gatacccatgtgtgtattactgacctagcta 66808
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>ref|NM_190685.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1182

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 223 gcgcgcggacgacgccgggaggc 245
           |||||||||||||||||||||||
Sbjct: 249 gcgcgcggacgacgccgggaggc 227
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 223      gcgcgcggacgacgccgggaggc 245
                |||||||||||||||||||||||
Sbjct: 37127346 gcgcgcggacgacgccgggaggc 37127324
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>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0489B03
          Length = 150381

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 223  gcgcgcggacgacgccgggaggc 245
            |||||||||||||||||||||||
Sbjct: 2002 gcgcgcggacgacgccgggaggc 1980
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0683F02
          Length = 153388

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 223    gcgcgcggacgacgccgggaggc 245
              |||||||||||||||||||||||
Sbjct: 128487 gcgcgcggacgacgccgggaggc 128465
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>dbj|AK107493.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D04, full
           insert sequence
          Length = 1617

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 223 gcgcgcggacgacgccgggaggc 245
           |||||||||||||||||||||||
Sbjct: 385 gcgcgcggacgacgccgggaggc 363
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>gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosome 5, complete sequence
          Length = 181004

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    ccgccgagctcccctcgcctc 296
              |||||||||||||||||||||
Sbjct: 122547 ccgccgagctcccctcgcctc 122527
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>gb|AC121572.2| Mus musculus BAC clone RP23-234P16 from 5, complete sequence
          Length = 136697

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 276    ccgccgagctcccctcgcctc 296
              |||||||||||||||||||||
Sbjct: 111056 ccgccgagctcccctcgcctc 111076
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>ref|NM_007227.3| Homo sapiens G protein-coupled receptor 45 (GPR45), mRNA
          Length = 1725

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 45   ttccctgttgccctcctcctc 65
            |||||||||||||||||||||
Sbjct: 1545 ttccctgttgccctcctcctc 1525
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 210     tgcaggccggcatgcgcgcgg 230
               |||||||||||||||||||||
Sbjct: 1008038 tgcaggccggcatgcgcgcgg 1008018
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>gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, complete sequence
          Length = 200918

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 45     ttccctgttgccctcctcctc 65
              |||||||||||||||||||||
Sbjct: 127700 ttccctgttgccctcctcctc 127720
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>gb|AF118266.1|AF118266 Homo sapiens orphan G protein-coupled receptor GPR45 (GPR45) gene,
            complete cds
          Length = 1601

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 45   ttccctgttgccctcctcctc 65
            |||||||||||||||||||||
Sbjct: 1481 ttccctgttgccctcctcctc 1461
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>ref|NM_213511.1| Danio rerio acetylserotonin O-methyltransferase-like (asmtl), mRNA
          Length = 2159

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  atattcccaaagcatctcct 40
           ||||||||||||||||||||
Sbjct: 565 atattcccaaagcatctcct 546
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>ref|XM_369330.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG06134.4) partial mRNA
          Length = 2019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 260  gccggagcgcagaagcccgc 279
            ||||||||||||||||||||
Sbjct: 997  gccggagcgcagaagcccgc 1016
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>gb|BC055218.1| Danio rerio acetylserotonin O-methyltransferase-like, mRNA (cDNA
           clone MGC:63714 IMAGE:2601966), complete cds
          Length = 2159

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  atattcccaaagcatctcct 40
           ||||||||||||||||||||
Sbjct: 565 atattcccaaagcatctcct 546
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>gb|AC126258.4| Mus musculus BAC clone RP23-325B8 from chromosome 14, complete sequence
          Length = 203304

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    ttctttccctgttgccctcctcct 64
             ||||||| ||||||||||||||||
Sbjct: 81885 ttctttctctgttgccctcctcct 81908
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>gb|AC104644.3| Homo sapiens chromosome 3 clone RP11-281N1, complete sequence
          Length = 187620

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tcatatggagagtgtttgtg 314
             ||||||||||||||||||||
Sbjct: 51318 tcatatggagagtgtttgtg 51299
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>emb|AL133379.3| Human DNA sequence from clone RP1-230I3 on chromosome 6q22.1-22.33
             Contains the 3' end of the gene for a novel protein
             similar to FLJ13018, complete sequence
          Length = 111764

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    ctttccctgttgccctcctc 62
             ||||||||||||||||||||
Sbjct: 81379 ctttccctgttgccctcctc 81398
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>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete sequence
          Length = 225212

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 41     ttctttccctgttgccctcctcct 64
              ||||||| ||||||||||||||||
Sbjct: 158390 ttctttctctgttgccctcctcct 158413
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>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence
          Length = 110184

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   atacccatgtgtgtattgcc 439
             ||||||||||||||||||||
Sbjct: 91760 atacccatgtgtgtattgcc 91741
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>gb|AC124046.2| Homo sapiens chromosome 3 clone RP11-352B8, complete sequence
          Length = 166496

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    tcatatggagagtgtttgtg 314
              ||||||||||||||||||||
Sbjct: 131015 tcatatggagagtgtttgtg 130996
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>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence
          Length = 261943

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    atattcccaaagcatctcct 40
             ||||||||||||||||||||
Sbjct: 16316 atattcccaaagcatctcct 16335
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>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9, complete
              sequence
          Length = 217065

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     atattcccaaagcatctcct 40
              ||||||||||||||||||||
Sbjct: 174345 atattcccaaagcatctcct 174364
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>gb|AC104633.2| Homo sapiens chromosome 3 clone RP11-118O11, complete sequence
          Length = 160172

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   tcatatggagagtgtttgtg 314
             ||||||||||||||||||||
Sbjct: 86753 tcatatggagagtgtttgtg 86772
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>ref|XM_697594.1| PREDICTED: Danio rerio hypothetical protein LOC554627 (LOC554627),
           mRNA
          Length = 2138

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  atattcccaaagcatctcct 40
           ||||||||||||||||||||
Sbjct: 565 atattcccaaagcatctcct 546
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>dbj|AK030297.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA,
            RIKEN full-length enriched library, clone:5031411E05
            product:transcription factor 23, full insert sequence
          Length = 3594

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tttccctgttgccctcctcc 63
            ||||||||||||||||||||
Sbjct: 3345 tttccctgttgccctcctcc 3364
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>dbj|AK030277.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA,
            RIKEN full-length enriched library, clone:5031404B19
            product:transcription factor 23, full insert sequence
          Length = 4110

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tttccctgttgccctcctcc 63
            ||||||||||||||||||||
Sbjct: 3351 tttccctgttgccctcctcc 3370
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>dbj|AB059397.2| Mus musculus OUT gene for basic helix-loop-helix transcription factor
            OUT, complete cds
          Length = 6241

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tttccctgttgccctcctcc 63
            ||||||||||||||||||||
Sbjct: 5480 tttccctgttgccctcctcc 5499
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>gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, complete sequence
          Length = 174927

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tccttccaagtgttagatca 379
             ||||||||||||||||||||
Sbjct: 52207 tccttccaagtgttagatca 52188
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>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0490F09
          Length = 149542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 213    aggccggcatgcgcgcggacgacgccgg 240
              ||||||||  ||||||||||||||||||
Sbjct: 126254 aggccggccggcgcgcggacgacgccgg 126227
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>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0429G06
          Length = 158321

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  aggccggcatgcgcgcggacgacgccgg 240
            ||||||||  ||||||||||||||||||
Sbjct: 6336 aggccggccggcgcgcggacgacgccgg 6309
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>dbj|AK119501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E08, full
           insert sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 213 aggccggcatgcgcgcggacgacgccgg 240
           ||||||||  ||||||||||||||||||
Sbjct: 360 aggccggccggcgcgcggacgacgccgg 333
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>gb|AF142405.1|AF142405 Mus musculus basic helix-loop-helix transcription factor OUT (Out)
            mRNA, complete cds
          Length = 4107

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tttccctgttgccctcctcc 63
            ||||||||||||||||||||
Sbjct: 3339 tttccctgttgccctcctcc 3358
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>gb|AC109608.14| Mus musculus strain C57BL/6J chromosome 5 clone rp23-154k6, complete
              sequence
          Length = 216195

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tttccctgttgccctcctcc 63
              ||||||||||||||||||||
Sbjct: 183246 tttccctgttgccctcctcc 183227
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>gb|AC109606.11| Mus musculus strain C57BL/6J chromosome 5 clone rp23-113m20, complete
              sequence
          Length = 210959

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     tttccctgttgccctcctcc 63
              ||||||||||||||||||||
Sbjct: 200074 tttccctgttgccctcctcc 200093
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>ref|NM_053085.1| Mus musculus transcription factor 23 (Tcf23), mRNA
          Length = 4107

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tttccctgttgccctcctcc 63
            ||||||||||||||||||||
Sbjct: 3339 tttccctgttgccctcctcc 3358
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>emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chromosome 2, complete
              sequence
          Length = 241249

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     agcatctcctttctttccct 50
              ||||||||||||||||||||
Sbjct: 207082 agcatctcctttctttccct 207101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,880,738
Number of Sequences: 3902068
Number of extensions: 2880738
Number of successful extensions: 56604
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56433
Number of HSP's gapped (non-prelim): 171
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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