Clone Name | bart33e09 |
---|---|
Clone Library Name | barley_pub |
>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)| Length = 275 Score = 132 bits (333), Expect = 4e-31 Identities = 68/115 (59%), Positives = 84/115 (73%) Frame = +2 Query: 170 LFRDYIGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 349 LFR+YIGA +N V+F+DVPINP F FILAF IDYT+ + P TPTNG FN FW L+ Sbjct: 2 LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSP-TPTNGNFNPFWDTNNLS 60 Query: 350 PAAIAEVKRRNPNVRVAVSLGGATVNGRPVFFNATSGVDSWVRNAVDSLTGIIQR 514 P+ +A +KR NV+V+VSLGG +V G VFFN +S V SWV NAV SLT II++ Sbjct: 61 PSQVAAIKRTYNNVKVSVSLGGNSVGGERVFFNPSS-VSSWVDNAVSSLTKIIKQ 114
>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb| chitinase-1) (TBC-1) Length = 314 Score = 127 bits (320), Expect = 1e-29 Identities = 64/115 (55%), Positives = 85/115 (73%) Frame = +2 Query: 170 LFRDYIGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 349 +FR+YIG+ +N V+F+DVPINP F FILAF IDYT+ + P TPTNG F FW L+ Sbjct: 28 VFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSSP-TPTNGNFKPFWDTNNLS 86 Query: 350 PAAIAEVKRRNPNVRVAVSLGGATVNGRPVFFNATSGVDSWVRNAVDSLTGIIQR 514 P+ +A VKR + NV+V++SLGG +V G+ VFF+ +S V SWV NAV SLT II++ Sbjct: 87 PSQVAAVKRTHSNVKVSLSLGGDSVGGKNVFFSPSS-VSSWVENAVSSLTRIIKQ 140
>RUAP_SOYBN (P39657) RuBisCO-associated protein| Length = 283 Score = 37.4 bits (85), Expect = 0.025 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Frame = +2 Query: 245 FDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEVKRRNP----NVRVAVSLG 412 F L+ DY + TNG+F +W +TP I + K++ V+V VS+G Sbjct: 29 FQVTLSLARDY----DGNNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSIG 84 Query: 413 GATVNGRPVFFNATSGVDSWVRNAVDSLTGIIQ 511 P + S ++WV A SL II+ Sbjct: 85 NKN-KQFPFTIGSDSNSEAWVSEATASLKSIIK 116
>SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein Src (EC| 2.7.10.2) (p60-Src) (v-Src) (pp60v-src) Length = 586 Score = 31.6 bits (70), Expect = 1.3 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 236 RARFDFILAFVIDYTTATEPPTP 304 R F+++ AF+ DY T+TEPP P Sbjct: 505 RPTFEYLQAFLEDYFTSTEPPVP 527
>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 29.6 bits (65), Expect = 5.1 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -3 Query: 489 STALRTQESTPEVALKNTGLPLTVAPPRLTATRTFGFRRLTSAIAAGVSTVS 334 S L S P+ L T LP+ +PP L +T L SA + V TV+ Sbjct: 869 SAPLPFSPSYPQDPLSPTSLPVCPSPPSLPSTTAAPLLSLASAFSLAVMTVA 920
>ADH1_DROMU (P07161) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 253 Score = 29.6 bits (65), Expect = 5.1 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 308 NGRFNVFWQDTVLTPAAIAEVKRRNPNVRV 397 +G N+ D + PAAIAE+K NPNV V Sbjct: 27 SGPKNLVILDRIENPAAIAELKALNPNVTV 56
>ADH1_DROMO (P09370) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 253 Score = 29.6 bits (65), Expect = 5.1 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +2 Query: 311 GRFNVFWQDTVLTPAAIAEVKRRNPNVRVAVSLGGATVN 427 G N+ D + PAAIAE+K NP V V L TV+ Sbjct: 28 GPKNLVILDRIENPAAIAELKALNPKVTVTFYLYDVTVS 66
>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 29.3 bits (64), Expect = 6.7 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -3 Query: 489 STALRTQESTPEVALKNTGLPLTVAPPRLTATRTFGFRRLTSAIAAGVSTVS 334 S+ L S P+V L LP +PP L +T L SA + V TV+ Sbjct: 869 SSPLPFSPSYPQVPLHPASLPTCPSPPPLPSTTAAPLLSLASAFSLAVMTVA 920
>MRAZ_THICR (Q31I69) Protein mraZ| Length = 152 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 298 DPDQRPVQRLLAGHGAHPRRDRRGQAAEPERAR 396 DP R VQRLL GH + D +G+ P R Sbjct: 69 DPQARLVQRLLLGHASEMEMDGQGRVLLPSLLR 101
>Y43R_IRV6 (P18305) Hypothetical protein 443R| Length = 2432 Score = 28.9 bits (63), Expect = 8.7 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 272 DYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEV 370 DY T T+PPT G N + D +TP A V Sbjct: 355 DYITITDPPTVGTGAANKAYVDANITPNATPTV 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.134 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,799,432 Number of Sequences: 219361 Number of extensions: 990316 Number of successful extensions: 2996 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2991 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)