ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33d08 |
|---|---|
| Clone Library Name | barley_pub |
>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor| Length = 254 Score = 60.8 bits (146), Expect = 2e-09 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 2/98 (2%) Frame = +2 Query: 158 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 337 N+T +L AG + F+ + ST QAN ++ G T+F P D+AF + K L++L Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105 Query: 338 SQQDQVTLVQAHIVPTFYSMESFE--TASNPVRTQASG 445 ++ LV H +P +YS+ F+ + S PV T A G Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGG 143
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 51.6 bits (122), Expect = 1e-06 Identities = 38/117 (32%), Positives = 59/117 (50%) Frame = +2 Query: 146 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 325 A+ N+T +LEKAG T F L+ S+ L + + G TVFAP+D AF + Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEAFKAEGVPD 240 Query: 326 LNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSAV 496 L L+Q + V+L++ H + + S +T N + T A+ G + T+TS V Sbjct: 241 LTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDL-TTSTSGDEV 296
>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor| Length = 422 Score = 49.3 bits (116), Expect = 6e-06 Identities = 36/117 (30%), Positives = 59/117 (50%) Frame = +2 Query: 146 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 325 A N+T +LEKAG T F L+ S+ + + + G TVFAP+D AF + Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEAFKARGVPD 241 Query: 326 LNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSAV 496 L +L+Q + V+L++ H + + S +T + + T A+ G + T+TS V Sbjct: 242 LTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDL-TTSTSGDEV 297
>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor| Length = 180 Score = 41.6 bits (96), Expect = 0.001 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%) Frame = +2 Query: 146 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 325 AA + ++E A F L+A+ + + A + E FTVFAPT++AF +L GT Sbjct: 40 AATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALSAEGP--FTVFAPTNDAFAALPAGT 97 Query: 326 LNSL----SQQDQVTLVQAHIVP---TFYSMESFETAS 418 + SL ++ V ++ H+VP T ++S E AS Sbjct: 98 VESLLLPENKDKLVKILTYHVVPGKITAAQVQSGEVAS 135
>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like| laminin-type EGF-like and link domain-containing scavenger receptor 1) (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Hyaluronan receptor for endocytosis) [ Length = 2551 Score = 40.0 bits (92), Expect = 0.004 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 7/92 (7%) Frame = +2 Query: 188 QYTKFIRLMASTQQDTQLNAQANESDTG--FTVFAPTDNAFNSLKPGTLNSL----SQQD 349 +Y+KF L+ ++T L +E G +T+F P + A N++K GTL+ L + Sbjct: 527 RYSKFRSLL----EETNLGHALDEDGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRK 582 Query: 350 QVTLVQAHIVPTFYSMESFETASNP-VRTQAS 442 + LV+ HIVP F +E S P +R+ A+ Sbjct: 583 LLELVRYHIVP-FTQLEVATLISTPHIRSMAN 613
>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog| Length = 133 Score = 39.3 bits (90), Expect = 0.006 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +2 Query: 200 FIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 343 F L+A+ Q + A E D FTVFAP D+AF L PGT+ +L Q Sbjct: 14 FSTLVAAVQAAGLVETLAGEGD--FTVFAPNDDAFAKLPPGTIQTLVQ 59
>PAM1_YEAST (P37304) Protein PAM1| Length = 830 Score = 38.1 bits (87), Expect = 0.014 Identities = 24/69 (34%), Positives = 31/69 (44%) Frame = +2 Query: 284 APTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCT 463 AP N NS P L SLSQ + Q +I +F T+ NP GT T Sbjct: 733 APCVNQLNSDSPPQLQSLSQNGTSKVPQINITQPSPIQTNFATSDNPAAVIKLGTPSEDT 792 Query: 464 VNVTATSNS 490 V+ AT+N+ Sbjct: 793 VSAAATANN 801
>Y1735_SYNY3 (P73392) Hypothetical protein sll1735| Length = 133 Score = 36.6 bits (83), Expect = 0.040 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +2 Query: 257 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 343 +S FTVFAPTD AF L PGT+ +L Q Sbjct: 31 QSPGPFTVFAPTDTAFAKLPPGTITTLVQ 59
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 35.4 bits (80), Expect = 0.089 Identities = 23/73 (31%), Positives = 35/73 (47%) Frame = +2 Query: 269 GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGT 448 G TVF P D+A P N L+ + + VPT+YSM ++ + P+ T A T Sbjct: 220 GMTVFCPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLA--T 276 Query: 449 DGPCTVNVTATSN 487 DG +T ++ Sbjct: 277 DGANKFELTVQND 289
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 35.0 bits (79), Expect = 0.12 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%) Frame = +2 Query: 164 TAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 343 + +L +GQ + + T + L+ Q + GF VF+ T L GT++ + Sbjct: 1408 SGILFGSGQSSGITSVSGETSGISDLSGQPS----GFPVFSGTATRTPDLASGTISGSGE 1463 Query: 344 QDQVTLVQ---AHIVPTFYSME----SFETASNPV-RTQASGTDGPCTVNVTATSNSAVN 499 +T V + PT + E S E + P T+ SGT G TV+V+ S+ A++ Sbjct: 1464 SSGITFVDTSFVEVTPTTFREEEGLGSVELSGFPSGETELSGTSG--TVDVSEQSSGAID 1521 Query: 500 VS 505 S Sbjct: 1522 SS 1523
>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)| [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan receptor for endocytosis)] (Fragment) Length = 1431 Score = 34.3 bits (77), Expect = 0.20 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +2 Query: 158 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES-DTGFTVFAPTDNAFNSLKPGTLNS 334 N+T V G YTKF +L+ QD+ L + +S T TVF PTD A +L P + Sbjct: 607 NLTTVAANHG-YTKFSKLI----QDSGLLSVITDSIHTPVTVFWPTDKALEALPPEQQDF 661 Query: 335 LSQQDQVTLVQAHI 376 L QD +++++ Sbjct: 662 LFNQDNKDKLKSYL 675
>VPS33_YEAST (P20795) Vacuolar protein sorting 33 (SLP1 protein)| Length = 691 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +2 Query: 323 TLNSLSQQDQVTLVQAHIVPTFYSMESFE--TASNPVR 430 TLN +SQ D+V +VQ ++P S+ +F+ T S PVR Sbjct: 21 TLNEISQNDEVLVVQPSVLPVLNSLLTFQDLTQSTPVR 58
>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau| Length = 775 Score = 33.9 bits (76), Expect = 0.26 Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Frame = +1 Query: 220 DAAGHAAER--AGQRVGHGLHGVRPHRQRLQQPQAGHPQLAL-------------AAGPG 354 +AAGH + +G+ V G G R Q +G P L GP Sbjct: 116 EAAGHVTQEPESGKVVREGFLGEPGPRSXSHQLASGMPGAPLLPEGPREATRQPSGTGPE 175 Query: 355 DARAGAHRPHLLLHGVLRDRQQPRP 429 D G H P LL H +L D Q P Sbjct: 176 DTEGGRHAPELLKHQLLGDLHQEGP 200
>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor| Length = 193 Score = 33.9 bits (76), Expect = 0.26 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = +2 Query: 236 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMES 403 QLN Q N DT +TVFAPT+ AF+ L T++ L + + T++ + Sbjct: 80 QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLT----SILTYHVVAG 135 Query: 404 FETASNPVRTQASGTDGPCTVNVTATSNS 490 + +N V T+ T +V VT NS Sbjct: 136 QTSPANVVGTRQ--TLQGASVTVTGQGNS 162
>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor| Length = 193 Score = 33.9 bits (76), Expect = 0.26 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = +2 Query: 236 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMES 403 QLN Q N DT +TVFAPT+ AF+ L T++ L + + T++ + Sbjct: 80 QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLT----SILTYHVVAG 135 Query: 404 FETASNPVRTQASGTDGPCTVNVTATSNS 490 + +N V T+ T +V VT NS Sbjct: 136 QTSPANVVGTRQ--TLQGASVTVTGQGNS 162
>CROC_DROME (P32027) Fork head domain protein crocodile (FKH protein FD1)| Length = 508 Score = 33.5 bits (75), Expect = 0.34 Identities = 23/83 (27%), Positives = 33/83 (39%) Frame = +1 Query: 190 VHQVHPADGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAGPGDARAG 369 +H VH A AA H A++ + V H H + P Q +GH ++ G A G Sbjct: 295 MHHVHHA----AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGG 350 Query: 370 AHRPHLLLHGVLRDRQQPRPHPG 438 + P +P PH G Sbjct: 351 WYTPE-------TPPSEPVPHNG 366
>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 33.5 bits (75), Expect = 0.34 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +2 Query: 272 FTVFAPTDNAFNSLKPGTLNSL 337 +TVFAPT+ AF +L PG LN L Sbjct: 537 YTVFAPTNEAFQALPPGELNKL 558 Score = 29.3 bits (64), Expect = 6.4 Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 2/115 (1%) Frame = +2 Query: 158 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 337 N+ ++E + +A++ +T L ESD FT+ APT+ A + TLN + Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTLL-----ESDGQFTLLAPTNEAKEKIPTETLNRI 296 Query: 338 SQQDQV--TLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSAV 496 + L+ HI+ + E+ + +A+ + C+ ++ + A+ Sbjct: 297 LGDPEALRDLLNNHILKSAMCAEAIVAGLSMETLEATTLEVGCSGDMLTINGKAI 351
>POSTN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast-specific factor 2)| (OSF-2) Length = 836 Score = 31.6 bits (70), Expect = 1.3 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Frame = +2 Query: 263 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES------FETA 415 D FT+FAPT+ AF L G L + D+V L++ HI+ T ES FET Sbjct: 266 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSESIMGGAVFETL 324 Query: 416 SNPVRTQASGTDG-PCTVN 469 T G DG TVN Sbjct: 325 EG--NTIEIGCDGDSITVN 341
>MP70_MYCKA (Q49614) Immunogenic protein MPT70 analog precursor (Fragment)| Length = 121 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Frame = +2 Query: 236 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 337 +LN Q N DT +TVFAPTD AF+ L T+ L Sbjct: 78 RLNPQVNLVDTLNNGQYTVFAPTDPAFDKLPASTIVQL 115
>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)| Length = 2571 Score = 31.2 bits (69), Expect = 1.7 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%) Frame = +2 Query: 158 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 337 NVTA E G Y F RL+ L + S FT+ PTD+A +L P N L Sbjct: 1728 NVTAAAESFG-YKIFSRLLTVAGLLPMLQ---DASHRPFTMLWPTDSALQALPPDRKNWL 1783 Query: 338 SQQDQ----VTLVQAHIVPTFYSMESFETASNPVRTQASGT 448 +D +++ H++ ++ S +RT T Sbjct: 1784 FHEDHRDKLAAILRGHMIRNIEALASDLPNLGQLRTMHGNT 1824
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 30.8 bits (68), Expect = 2.2 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = +2 Query: 215 ASTQQDTQLNAQANESDTGFTVFAP-TDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFY 391 A +D++ NAQ E+D T F P ++L +L D++ +Q +PT Sbjct: 281 AEEDRDSKTNAQTAETDADDTEFEPQAGEDEDNLSDDSL------DEIISLQVPTLPTTV 334 Query: 392 SMESFETASNPVRTQASGTDGPCTVNVTATSNSA 493 + +S P + T+GP +V + T+ +A Sbjct: 335 TGQSTIGTGTPTMLRGRKTNGPGSVISSYTATTA 368
>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) Length = 683 Score = 30.8 bits (68), Expect = 2.2 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Frame = +2 Query: 155 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 334 P + V++ +F L+A+ Q + E +TVFAPT+ AF ++ P LN Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGV--YTVFAPTNEAFQAMPPEELNK 557 Query: 335 L--SQQDQVTLVQAHI 376 L + ++ +++ HI Sbjct: 558 LLANAKELTNILKYHI 573 Score = 29.3 bits (64), Expect = 6.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 257 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA 370 E FT+FAP++ A++SL L+SL + L+ A Sbjct: 133 EGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNA 170
>VID21_EMENI (Q5B4Q8) Chromatin modification-related protein vid21| Length = 1447 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +1 Query: 301 LQQPQAGHPQLALAAGPGDARAGAHRPHLL-LHGVLRDRQQPRPHP 435 +QQ A P +A+ A P +AR L +L+ RQQP HP Sbjct: 1149 MQQNNAPRPNMAMQASPDNARVIREANRLQEQQRILQSRQQPSQHP 1194
>PTPRV_RAT (Q64612) Receptor-type tyrosine-protein phosphatase V precursor (EC| 3.1.3.48) (Embryonic stem cell protein-tyrosine phosphatase) (ES cell phosphatase) (Osteotesticular protein-tyrosine phosphatase) (OST-PTP) Length = 1711 Score = 30.0 bits (66), Expect = 3.7 Identities = 24/81 (29%), Positives = 33/81 (40%) Frame = +2 Query: 215 ASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYS 394 + + + QL A NES GF + LK L Q +TL A PT Sbjct: 76 SGSPEGQQLQAHTNES--GFEFHGLVPGSRYQLKLTVLRPCWQNVTITLT-ARTAPTVVR 132 Query: 395 MESFETASNPVRTQASGTDGP 457 +A +P R +AS +D P Sbjct: 133 GLQLHSAGSPARLEASWSDAP 153
>POSTN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast-specific factor 2)| (OSF-2) Length = 838 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +2 Query: 263 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES 403 D FT+FAPT+ AF L G L + D+V L++ HI+ T E+ Sbjct: 268 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSEA 316
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 29.6 bits (65), Expect = 4.9 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +2 Query: 158 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 337 N+T V G YTKF +L+ Q L + T T+F PTD A +L + L Sbjct: 1750 NLTTVAANHG-YTKFSKLI---QDSGLLKVITDPMHTPVTLFWPTDKALQALPQEQQDFL 1805 Query: 338 SQQDQVTLVQAHI 376 +D ++A++ Sbjct: 1806 FNEDNKDKLKAYL 1818
>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)| Length = 220 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +2 Query: 236 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 379 +LN N DT +TVFAPT+ AF+ L T++ L ++ +++ H++ Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159
>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)| Length = 220 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +2 Query: 236 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 379 +LN N DT +TVFAPT+ AF+ L T++ L ++ +++ H++ Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159
>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau| Length = 775 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 346 GPGDARAGAHRPHLLLHGVLRDRQQPRP 429 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau| Length = 775 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 346 GPGDARAGAHRPHLLLHGVLRDRQQPRP 429 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau| Length = 757 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 346 GPGDARAGAHRPHLLLHGVLRDRQQPRP 429 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 757 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 346 GPGDARAGAHRPHLLLHGVLRDRQQPRP 429 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)| (Scaffold attachment factor A) (SAF-A) (p120) (pp120) Length = 824 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +1 Query: 211 DGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAG 348 +G D G E AG GHG +P + QQPQ AAG Sbjct: 140 EGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAAKEAAG 185
>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)| Length = 2798 Score = 28.9 bits (63), Expect = 8.3 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 11/81 (13%) Frame = +2 Query: 203 IRLMASTQQDTQL----NAQANESDTGFTVFAPTDNAFNSLKPGTLNS-------LSQQD 349 +R QQD L N+ +E+D F V P + + P +N LSQQ+ Sbjct: 365 VRSSDMDQQDDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCLSQQE 424 Query: 350 QVTLVQAHIVPTFYSMESFET 412 Q + A+ VP S T Sbjct: 425 QTAFLPANQVPVLQQNTSVAT 445
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Frame = +1 Query: 244 RAGQRVGHGLHGVRPHR----QRLQQPQAGHPQLALAAGPGDARAGAHRP 381 R GQR G G G RP Q +PQ G Q A A + + G RP Sbjct: 263 RGGQRQGAGAGGPRPQGGPRPQGGSRPQGGSAQGAQGAPSQERQGGGRRP 312
>HMUV_YERPE (Q56993) Hemin transport system ATP-binding protein hmuV| Length = 266 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +1 Query: 256 RVGHGLHGVRPHRQRLQQPQAGHPQLALAAGPGDARAGAHRPHLLLHGVLRDRQQPRPHP 435 ++G +G RQ LQQ A LALA +G + + L VL QP+P P Sbjct: 107 QMGRAPYGGSQDRQALQQVMAQTDCLALAQRDYRVLSGGEQQRVQLARVLAQLWQPQPTP 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,371,441 Number of Sequences: 219361 Number of extensions: 553665 Number of successful extensions: 2492 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2379 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2483 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
