ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33d08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 Score = 763 bits (385), Expect = 0.0 Identities = 446/465 (95%), Gaps = 6/465 (1%) Strand = Plus / Plus Query: 46 ggcggcagtgccggcggcgctgagccagaagacgacggccccggcgccagaagaggcgg- 104 |||||| ||||||||||||||||||||||||||||||||||||||||| || | | | | Sbjct: 92 ggcggcggtgccggcggcgctgagccagaagacgacggccccggcgcccgaggcgcccga 151 Query: 105 --cgccggacgcgccggcggcggggacgacgacgcccaaggtggcggcggcgccgaacgt 162 |||| |||||||||||||||||||||||| ||||||| ||| || ||||||||||| Sbjct: 152 gacgccagacgcgccggcggcggggacgacg---cccaaggcggccgccgcgccgaacgt 208 Query: 163 gacggcggtgctggagaaggccgggcagtacaccaagttcatccggctgatggcgtcgac 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 gacggcggtgctggagaaggccgggcagtacaccaagttcatccggctgatggcgtcgac 268 Query: 223 gcagcaggacacgcagctgaacgcgcaggccaacgagtcggacacgggcttcacggtgtt 282 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 269 gcagcaggacacgcagctgaacgcgcaggccaacgactccgacacgggcttcacggtgtt 328 Query: 283 cgcccccaccgacaacgccttcaacagcctcaagccgggcaccctcaactcgctctcgca 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 cgcccccaccgacaacgccttcaacagcctcaagccgggcaccctcaactcgctctcgca 388 Query: 343 gcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttctactccatggagtc 402 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 389 gcaggaccaggtgacgctcgtgcaggcccacatcgtccccaccttctactccatggagtc 448 Query: 403 cttcgagaccgccagcaaccccgtccgcacccaggcctccggcaccgacgggccctgcac 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 cttcgagaccgccagcaaccccgtccgcacccaggcctccggcaccgacgggccctgcac 508 Query: 463 cgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 507 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 cgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 553
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 232 bits (117), Expect = 9e-58 Identities = 282/337 (83%) Strand = Plus / Plus Query: 145 ggcggcggcgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcat 204 ||||||||||| ||||||||||||| | |||||||||| |||| |||||| | |||||| Sbjct: 57589 ggcggcggcgctgaacgtgacggcgatcctggagaagggcgggtcgtacacgacgttcat 57648 Query: 205 ccggctgatggcgtcgacgcagcaggacacgcagctgaacgcgcaggccaacgagtcgga 264 |||||||||| | |||||||||||||||||||||||| ||| |||| || Sbjct: 57649 ccggctgatgaagagcacgcagcaggacacgcagctgaacagccagctgaacggcacgtc 57708 Query: 265 cacgggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcac 324 ||| |||||||| |||||||||||||||||| ||| |||| |||||||||||| ||||| Sbjct: 57709 caccggcttcaccgtgttcgcccccaccgacggcgcgttcagcagcctcaagcccggcac 57768 Query: 325 cctcaactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccac 384 |||||||| || ||| ||||||||||||| |||| |||||||||||||||||||||| Sbjct: 57769 gctcaactccctgtcggcgcaggaccaggtgtcgctggtgcaggcgcacatcgtccccaa 57828 Query: 385 cttctactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccgg 444 |||||||||||||| ||||||| || || |||||||| || ||||||||||| ||||| Sbjct: 57829 gttctactccatggacgccttcgacacggcgagcaacccggtgcgcacccaggcgtccgg 57888 Query: 445 caccgacgggccctgcaccgtcaacgtcaccgccacc 481 | |||||| |||| ||| ||||| ||||||||||| Sbjct: 57889 cggcgacggtccctacacgctcaacatcaccgccacc 57925 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 156 cgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggct 210 ||||||||||||| |||||||||||| |||| ||||||||| ||| ||||||| Sbjct: 62067 cgaacgtgacggcagtgctggagaagtccggcaagtacaccaccttcctccggct 62121 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 311 ctcaagccgggcaccctcaactcgctctcgcagcaggaccag 352 |||||||||||||| ||||||||||| ||| |||||||||| Sbjct: 62222 ctcaagccgggcacgctcaactcgctgtcgtcgcaggaccag 62263
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 232 bits (117), Expect = 9e-58 Identities = 282/337 (83%) Strand = Plus / Plus Query: 145 ggcggcggcgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcat 204 ||||||||||| ||||||||||||| | |||||||||| |||| |||||| | |||||| Sbjct: 27827172 ggcggcggcgctgaacgtgacggcgatcctggagaagggcgggtcgtacacgacgttcat 27827231 Query: 205 ccggctgatggcgtcgacgcagcaggacacgcagctgaacgcgcaggccaacgagtcgga 264 |||||||||| | |||||||||||||||||||||||| ||| |||| || Sbjct: 27827232 ccggctgatgaagagcacgcagcaggacacgcagctgaacagccagctgaacggcacgtc 27827291 Query: 265 cacgggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcac 324 ||| |||||||| |||||||||||||||||| ||| |||| |||||||||||| ||||| Sbjct: 27827292 caccggcttcaccgtgttcgcccccaccgacggcgcgttcagcagcctcaagcccggcac 27827351 Query: 325 cctcaactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccac 384 |||||||| || ||| ||||||||||||| |||| |||||||||||||||||||||| Sbjct: 27827352 gctcaactccctgtcggcgcaggaccaggtgtcgctggtgcaggcgcacatcgtccccaa 27827411 Query: 385 cttctactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccgg 444 |||||||||||||| ||||||| || || |||||||| || ||||||||||| ||||| Sbjct: 27827412 gttctactccatggacgccttcgacacggcgagcaacccggtgcgcacccaggcgtccgg 27827471 Query: 445 caccgacgggccctgcaccgtcaacgtcaccgccacc 481 | |||||| |||| ||| ||||| ||||||||||| Sbjct: 27827472 cggcgacggtccctacacgctcaacatcaccgccacc 27827508 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 273 tcacggtgttcgcccccaccgacaacgccttc 304 ||||||||||||||||||||||| |||||||| Sbjct: 22442848 tcacggtgttcgcccccaccgacgacgccttc 22442879 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 156 cgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggct 210 ||||||||||||| |||||||||||| |||| ||||||||| ||| ||||||| Sbjct: 27831650 cgaacgtgacggcagtgctggagaagtccggcaagtacaccaccttcctccggct 27831704 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 311 ctcaagccgggcaccctcaactcgctctcgcagcaggaccag 352 |||||||||||||| ||||||||||| ||| |||||||||| Sbjct: 27831805 ctcaagccgggcacgctcaactcgctgtcgtcgcaggaccag 27831846 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcggggacgacgacg 136 ||||||||||| | |||||||||||||| Sbjct: 17578523 ggacgcgccggggtcggggacgacgacg 17578550 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 cgccggcggcggggacgacgacgc 137 |||||||| ||||||||||||||| Sbjct: 1990268 cgccggcgtcggggacgacgacgc 1990291
>ref|NM_191933.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 196 bits (99), Expect = 5e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctc 328 |||| ||| |||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 226 ggctacaccgtgttcgcgcctaccgacaacgccttcaacaacctcaagccgggcaccctc 285 Query: 329 aactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttc 388 ||| || |||||||| | |||||| ||||||| |||| ||| || |||| ||| Sbjct: 286 aacagcctgacgcagcagcagcaggtggcgctcgtccagggccacgtcctcccgcagttc 345 Query: 389 tactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcacc 448 ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct: 346 tactccatggactccttccagacggccagcaaccccgtccgcacccaggcgtccggcacc 405 Query: 449 gacgggccctgcaccgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 507 ||||| |||| |||| ||||| ||||| |||||| ||||| | ||||||||||||||| Sbjct: 406 gacggcccctacaccctcaacatcacctccaccaccaacaacaacgtcaacgtctccac 464 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||| Sbjct: 104 cgccgaacgtgacggcggtcctggagaagggagggcagtacacgacgttcatccggctga 163 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 164 tgaaggagacgcagcaggacacgcagctgaac 195
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 196 bits (99), Expect = 5e-47 Identities = 204/239 (85%) Strand = Plus / Minus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctc 328 |||| ||| |||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 27334930 ggctacaccgtgttcgcgcctaccgacaacgccttcaacaacctcaagccgggcaccctc 27334871 Query: 329 aactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttc 388 ||| || |||||||| | |||||| ||||||| |||| ||| || |||| ||| Sbjct: 27334870 aacagcctgacgcagcagcagcaggtggcgctcgtccagggccacgtcctcccgcagttc 27334811 Query: 389 tactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcacc 448 ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct: 27334810 tactccatggactccttccagacggccagcaaccccgtccgcacccaggcgtccggcacc 27334751 Query: 449 gacgggccctgcaccgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 507 ||||| |||| |||| ||||| ||||| |||||| ||||| | ||||||||||||||| Sbjct: 27334750 gacggcccctacaccctcaacatcacctccaccaccaacaacaacgtcaacgtctccac 27334692 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||| Sbjct: 27335052 cgccgaacgtgacggcggtcctggagaagggagggcagtacacgacgttcatccggctga 27334993 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 27334992 tgaaggagacgcagcaggacacgcagctgaac 27334961 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 ggacgcgccggcggcggggacgacgacg 136 |||| |||||||| |||||||||||||| Sbjct: 38232786 ggacacgccggcgacggggacgacgacg 38232759
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 196 bits (99), Expect = 5e-47 Identities = 204/239 (85%) Strand = Plus / Minus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctc 328 |||| ||| |||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 17825 ggctacaccgtgttcgcgcctaccgacaacgccttcaacaacctcaagccgggcaccctc 17766 Query: 329 aactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttc 388 ||| || |||||||| | |||||| ||||||| |||| ||| || |||| ||| Sbjct: 17765 aacagcctgacgcagcagcagcaggtggcgctcgtccagggccacgtcctcccgcagttc 17706 Query: 389 tactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcacc 448 ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct: 17705 tactccatggactccttccagacggccagcaaccccgtccgcacccaggcgtccggcacc 17646 Query: 449 gacgggccctgcaccgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 507 ||||| |||| |||| ||||| ||||| |||||| ||||| | ||||||||||||||| Sbjct: 17645 gacggcccctacaccctcaacatcacctccaccaccaacaacaacgtcaacgtctccac 17587 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||| Sbjct: 17947 cgccgaacgtgacggcggtcctggagaagggagggcagtacacgacgttcatccggctga 17888 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 17887 tgaaggagacgcagcaggacacgcagctgaac 17856
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 196 bits (99), Expect = 5e-47 Identities = 204/239 (85%) Strand = Plus / Minus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctc 328 |||| ||| |||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 115447 ggctacaccgtgttcgcgcctaccgacaacgccttcaacaacctcaagccgggcaccctc 115388 Query: 329 aactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttc 388 ||| || |||||||| | |||||| ||||||| |||| ||| || |||| ||| Sbjct: 115387 aacagcctgacgcagcagcagcaggtggcgctcgtccagggccacgtcctcccgcagttc 115328 Query: 389 tactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcacc 448 ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct: 115327 tactccatggactccttccagacggccagcaaccccgtccgcacccaggcgtccggcacc 115268 Query: 449 gacgggccctgcaccgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 507 ||||| |||| |||| ||||| ||||| |||||| ||||| | ||||||||||||||| Sbjct: 115267 gacggcccctacaccctcaacatcacctccaccaccaacaacaacgtcaacgtctccac 115209 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||| Sbjct: 115569 cgccgaacgtgacggcggtcctggagaagggagggcagtacacgacgttcatccggctga 115510 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 115509 tgaaggagacgcagcaggacacgcagctgaac 115478
>dbj|AK105603.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A09, full insert sequence Length = 1040 Score = 196 bits (99), Expect = 5e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctc 328 |||| ||| |||||||| || ||||||||||||||||||| ||||||||||||||||||| Sbjct: 279 ggctacaccgtgttcgcgcctaccgacaacgccttcaacaacctcaagccgggcaccctc 338 Query: 329 aactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttc 388 ||| || |||||||| | |||||| ||||||| |||| ||| || |||| ||| Sbjct: 339 aacagcctgacgcagcagcagcaggtggcgctcgtccagggccacgtcctcccgcagttc 398 Query: 389 tactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcacc 448 ||||||||||| |||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct: 399 tactccatggactccttccagacggccagcaaccccgtccgcacccaggcgtccggcacc 458 Query: 449 gacgggccctgcaccgtcaacgtcaccgccaccagcaacagcgccgtcaacgtctccac 507 ||||| |||| |||| ||||| ||||| |||||| ||||| | ||||||||||||||| Sbjct: 459 gacggcccctacaccctcaacatcacctccaccaccaacaacaacgtcaacgtctccac 517 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||||| |||||||||| ||||||||||| | |||||||||||||| Sbjct: 157 cgccgaacgtgacggcggtcctggagaagggagggcagtacacgacgttcatccggctga 216 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 217 tgaaggagacgcagcaggacacgcagctgaac 248
>gb|BT016499.1| Zea mays clone Contig332 mRNA sequence Length = 1156 Score = 190 bits (96), Expect = 3e-45 Identities = 180/208 (86%) Strand = Plus / Plus Query: 274 cacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctcaactc 333 |||||||||||| |||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 336 cacggtgttcgcgcccaccgacaacgccttcaacaacctcaagcccggcacgctcaactc 395 Query: 334 gctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttctactc 393 ||| |||||||| | |||||| |||| ||||||| ||| || | ||| |||||| Sbjct: 396 gctgacgcagcagcagcaggtggcgctggtgcagggccacgtcctgccccagttctacag 455 Query: 394 catggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcaccgacgg 453 |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 456 catggactccttccagaccgccagcaaccccgtccgcacccaggcctccggccgcgacgg 515 Query: 454 gccctgcaccgtcaacgtcaccgccacc 481 ||||| ||| ||||| ||||||||||| Sbjct: 516 gccctacacgctcaacatcaccgccacc 543 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Plus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||| | |||||||||| |||||||||||||| |||||| ||||||| Sbjct: 203 cgccgaacgtgacggcgatcctggagaagggcgggcagtacaccatgttcatgcggctga 262 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 263 tgaaggagacgcagcaggacacgcagctgaac 294
>gb|AY107515.1| Zea mays PCO145505 mRNA sequence Length = 883 Score = 190 bits (96), Expect = 3e-45 Identities = 180/208 (86%) Strand = Plus / Plus Query: 274 cacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctcaactc 333 |||||||||||| |||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 326 cacggtgttcgcgcccaccgacaacgccttcaacaacctcaagcccggcacgctcaactc 385 Query: 334 gctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttctactc 393 ||| |||||||| | |||||| |||| ||||||| ||| || | ||| |||||| Sbjct: 386 gctgacgcagcagcagcaggtggcgctggtgcagggccacgtcctgccccagttctacag 445 Query: 394 catggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggcaccgacgg 453 |||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 446 catggactccttccagaccgccagcaaccccgtccgcacccaggcctccggccgcgacgg 505 Query: 454 gccctgcaccgtcaacgtcaccgccacc 481 ||||| ||| ||||| ||||||||||| Sbjct: 506 gccctacacgctcaacatcaccgccacc 533 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 ||||||||||||||||| | |||||||||| |||||||| ||||| |||||| ||||||| Sbjct: 193 cgccgaacgtgacggcgatcctggagaagggcgggcagttcaccatgttcatgcggctga 252 Query: 213 tggcgtcgacgcagcaggacacgcagctgaac 244 || | ||||||||||||||||||||||||| Sbjct: 253 tgaaggagacgcagcaggacacgcagctgaac 284
>gb|BT009205.1| Triticum aestivum clone wle1n.pk0037.e9:fis, full insert mRNA sequence Length = 1013 Score = 153 bits (77), Expect = 7e-34 Identities = 152/177 (85%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaagccgggcaccctc 328 |||| ||| |||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 298 ggctacaccgtgttcgcgcccaccgacaacgccttcaacaacctcaagcccggcacgctc 357 Query: 329 aactcgctctcgcagcaggaccaggtgacgctcgtgcaggcgcacatcgtccccaccttc 388 ||| ||| | |||||| | |||||| ||||||| ||||| |||||| | ||| | | Sbjct: 358 aacagcctcacccagcagcagcaggtgtcgctcgtccaggcccacatcctgccccagtac 417 Query: 389 tactccatggagtccttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 418 tacaccatggagtccttccagacggccagcaaccccgtccgcacccaggcctccggc 474 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 153 cgccgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggctga 212 |||||||||||||||| | |||| ||||| |||||||||||| | ||||| ||||||| Sbjct: 176 cgccgaacgtgacggccatcctggtgaagggcgggcagtacacgaccttcatgcggctga 235 Query: 213 tggcgtcgacgcagcaggacacgcagct 240 || | ||||||||||||||||||||| Sbjct: 236 tgaaggagacgcagcaggacacgcagct 263
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 273 tcacggtgttcgcccccaccgacaacgccttc 304 ||||||||||||||||||||||| |||||||| Sbjct: 32255 tcacggtgttcgcccccaccgacgacgccttc 32286
>dbj|AK099313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144L21, full insert sequence Length = 1147 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 156 cgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggct 210 ||||||||||||| |||||||||||| |||| ||||||||| ||| ||||||| Sbjct: 213 cgaacgtgacggcagtgctggagaagtccggcaagtacaccaccttcctccggct 267 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 311 ctcaagccgggcaccctcaactcgctctcgcagcaggaccag 352 |||||||||||||| ||||||||||| ||| |||||||||| Sbjct: 368 ctcaagccgggcacgctcaactcgctgtcgtcgcaggaccag 409
>dbj|AK058836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-C09, full insert sequence Length = 1102 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 156 cgaacgtgacggcggtgctggagaaggccgggcagtacaccaagttcatccggct 210 ||||||||||||| |||||||||||| |||| ||||||||| ||| ||||||| Sbjct: 219 cgaacgtgacggcagtgctggagaagtccggcaagtacaccaccttcctccggct 273 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 311 ctcaagccgggcaccctcaactcgctctcgcagcaggaccag 352 |||||||||||||| ||||||||||| ||| |||||||||| Sbjct: 374 ctcaagccgggcacgctcaactcgctgtcgtcgcaggaccag 415
>ref|XM_507474.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23 mRNA Length = 1080 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 411 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 452
>ref|XM_506786.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.23 mRNA Length = 1080 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 411 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 452
>ref|XM_465181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1079 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 408 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 449
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 12127919 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 12127878 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 tgacggcggtgctggagaagg 182 ||||||||||||||||||||| Sbjct: 33523754 tgacggcggtgctggagaagg 33523774
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 76224 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 76183
>dbj|AK104533.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D08, full insert sequence Length = 1080 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 411 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 452
>dbj|AK104098.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-D11, full insert sequence Length = 1079 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 408 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 449
>dbj|AK060903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E01, full insert sequence Length = 1080 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 404 ttcgagaccgccagcaaccccgtccgcacccaggcctccggc 445 ||||||||| ||| |||||| || |||||||||||||||||| Sbjct: 411 ttcgagaccaccaccaacccggtgcgcacccaggcctccggc 452
>gb|BT009073.1| Triticum aestivum clone wip1c.pk002.f10:fis, full insert mRNA sequence Length = 632 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 ggggacgacgacgcccaaggtggcggcggcgc 155 ||||||||||||| |||||||||||| ||||| Sbjct: 202 ggggacgacgacgaccaaggtggcggaggcgc 233
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 98 gaggcggcgccggacgcgccggcg 121 |||||||||||||||||||||||| Sbjct: 784332 gaggcggcgccggacgcgccggcg 784355
>ref|NM_120395.1| Arabidopsis thaliana FLA11 AT5G03170 (FLA11) mRNA, complete cds Length = 882 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 239 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 285
>ref|NM_120394.2| Arabidopsis thaliana heat shock protein binding / unfolded protein binding AT5G03160 mRNA, complete cds Length = 2599 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 2361 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 2315
>gb|AY039999.1| Arabidopsis thaliana putative arabinogalactan protein (At5g03170) mRNA, complete cds Length = 741 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 220 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 266
>gb|AF360183.1| Arabidopsis thaliana putative arabinogalactan protein (At5g03170) mRNA, complete cds Length = 931 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 239 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 285
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 56431 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 56385
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgccgt 495 |||||||||||||||||||| |||||| Sbjct: 11684 cgtcaccgccaccagcaacaccgccgt 11710
>emb|AJ495844.1|LJA495844 Lotus japonicus mRNA for hypernodulation aberrant root formation protein, (har1 gene) Length = 3298 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 cgtcaccgccaccagcaacagcgccgt 495 |||||||||||||||||||| |||||| Sbjct: 2082 cgtcaccgccaccagcaacaccgccgt 2056
>emb|AJ495843.1|LJA495843 Lotus japonicus har1 gene for hypernodulation aberrant root formation protein, exons 1-2 Length = 4874 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 cgtcaccgccaccagcaacagcgccgt 495 |||||||||||||||||||| |||||| Sbjct: 2082 cgtcaccgccaccagcaacaccgccgt 2056
>gb|AY085388.1| Arabidopsis thaliana clone 14950 mRNA, complete sequence Length = 882 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 239 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 285
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 269 ggcttcacggtgttcgcccccaccgacaacgccttcaacagcctcaa 315 ||||| || ||||| ||||| || || |||||||||||||||||||| Sbjct: 27570 ggcttaaccgtgtttgccccgactgataacgccttcaacagcctcaa 27524
>dbj|AP005667.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258c, complete sequence Length = 38809 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgccgt 495 |||||||||||||||||||| |||||| Sbjct: 13500 cgtcaccgccaccagcaacaccgccgt 13526
>dbj|AB092810.1| Lotus japonicus HAR1 mRNA for LRR receptor-like kinase, complete cds Length = 3269 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 cgtcaccgccaccagcaacagcgccgt 495 |||||||||||||||||||| |||||| Sbjct: 2092 cgtcaccgccaccagcaacaccgccgt 2066
>dbj|AB092809.1| Lotus japonicus HAR1 gene for LRR receptor-like kinase, hypothetical proteins, complete and partial cds, clone:BAC259.12D-2 Length = 39462 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgccgt 495 |||||||||||||||||||| |||||| Sbjct: 13372 cgtcaccgccaccagcaacaccgccgt 13398
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 463 cgtcaacgtcaccgccaccagcaacagcgcc 493 ||||| |||||||| |||||||||||||||| Sbjct: 3315469 cgtcaccgtcaccgtcaccagcaacagcgcc 3315499
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cggcggcggggacgacgacgcccaag 142 |||||||| ||||||||||||||||| Sbjct: 110439 cggcggcgaggacgacgacgcccaag 110414
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 ggcggcgccggacgcgccggcggcgg 125 ||||||| |||||||||||||||||| Sbjct: 605902 ggcggcggcggacgcgccggcggcgg 605877
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cggcggcggggacgacgacgcccaag 142 |||||||| ||||||||||||||||| Sbjct: 20848040 cggcggcgaggacgacgacgcccaag 20848015
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 gcggcgccggacgcgccggcgg 122 |||||||||||||||||||||| Sbjct: 4636440 gcggcgccggacgcgccggcgg 4636461
>ref|NM_210996.1| Eremothecium gossypii AFR095Cp (AFR095C), mRNA Length = 2013 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 ggcggcgccggacgcgccggcggcgg 125 ||||||| |||||||||||||||||| Sbjct: 798 ggcggcggcggacgcgccggcggcgg 823
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 473 accgccaccagcaacagcgccgtcaacgtctcca 506 ||||||||||||||| |||||| || |||||||| Sbjct: 3515562 accgccaccagcaacggcgccgacagcgtctcca 3515529 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 tccggctgatggcgtcgacg 223 |||||||||||||||||||| Sbjct: 5492591 tccggctgatggcgtcgacg 5492610 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gccggcggcgctgagccaga 74 |||||||||||||||||||| Sbjct: 2973280 gccggcggcgctgagccaga 2973299
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 cggcggcggggacgacgacgcccaag 142 |||||||| ||||||||||||||||| Sbjct: 20859304 cggcggcgaggacgacgacgcccaag 20859279
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 471 tcaccgccaccagcaacagcgccgtc 496 ||||||||||||||||||| |||||| Sbjct: 748457 tcaccgccaccagcaacagggccgtc 748432 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cgcccaaggtggcggcggcg 154 |||||||||||||||||||| Sbjct: 2926751 cgcccaaggtggcggcggcg 2926732
>gb|AY509120.1| Streptomyces bikiniensis strain NRRL 2737 chalcomycin biosynthetic gene cluster, partial sequence Length = 85915 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 ggcggggacgacgacgcccaaggtg 145 |||||||||||||||||||| |||| Sbjct: 72177 ggcggggacgacgacgcccagggtg 72201
>ref|XM_468184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2898 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tgacggcggtgctggagaagg 182 ||||||||||||||||||||| Sbjct: 502 tgacggcggtgctggagaagg 482
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 460 caccgtcaacgtcaccgccaccagcaacagcgc 492 ||||| |||| ||||||||||||||||| |||| Sbjct: 4818729 caccgccaacctcaccgccaccagcaacggcgc 4818697
>gb|AC129014.4| Mus musculus BAC clone RP24-317F20 from chromosome 19, complete sequence Length = 175855 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tctcgcagcaggaccaggtga 356 ||||||||||||||||||||| Sbjct: 152287 tctcgcagcaggaccaggtga 152267
>ref|XM_815713.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509525.70) partial mRNA Length = 738 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cgtggtgctgctggcggcggc 51 ||||||||||||||||||||| Sbjct: 669 cgtggtgctgctggcggcggc 649
>ref|XM_815725.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509525.260) partial mRNA Length = 1167 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cgtggtgctgctggcggcggc 51 ||||||||||||||||||||| Sbjct: 957 cgtggtgctgctggcggcggc 937
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgcc 493 |||||||| |||||||||||||||| Sbjct: 3910907 cgtcaccgtcaccagcaacagcgcc 3910931
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgcc 493 |||||||| |||||||||||||||| Sbjct: 3737524 cgtcaccgtcaccagcaacagcgcc 3737548
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 cggcggggacgacgacgccca 140 ||||||||||||||||||||| Sbjct: 240448 cggcggggacgacgacgccca 240428
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 cgtggtgctgctggcggcggc 51 ||||||||||||||||||||| Sbjct: 3623858 cgtggtgctgctggcggcggc 3623838
>gb|AC105411.1| Homo sapiens chromosome 16 clone RP11-354A20, complete sequence Length = 172797 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 460 caccgtcaacgtcaccgccaccagcaaca 488 |||||||| |||||||| ||||||||||| Sbjct: 113172 caccgtcaccgtcaccgtcaccagcaaca 113144
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cgcgccggcggcggggacgacgacg 136 ||||||||||||| ||||||||||| Sbjct: 3495809 cgcgccggcggcgaggacgacgacg 3495833 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gccggcggcgctgagccaga 74 |||||||||||||||||||| Sbjct: 26273227 gccggcggcgctgagccaga 26273246
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgccggcggcggggacgacga 134 ||||||||||||||||||||| Sbjct: 25114828 cgccggcggcggggacgacga 25114808 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 27097535 gccggcggcggggacgacga 27097554
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgccggcggcggggacgacga 134 ||||||||||||||||||||| Sbjct: 2694764 cgccggcggcggggacgacga 2694744
>gb|AC151730.5| Mus musculus BAC clone RP24-84E18 from chromosome 19, complete sequence Length = 222459 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 tctcgcagcaggaccaggtga 356 ||||||||||||||||||||| Sbjct: 96316 tctcgcagcaggaccaggtga 96296
>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0023I22 Length = 170029 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgccggcggcggggacgacga 134 ||||||||||||||||||||| Sbjct: 167161 cgccggcggcggggacgacga 167141
>dbj|AP007205.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0048L03 Length = 142377 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgccggcggcggggacgacga 134 ||||||||||||||||||||| Sbjct: 61014 cgccggcggcggggacgacga 60994
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 tgacggcggtgctggagaagg 182 ||||||||||||||||||||| Sbjct: 98629 tgacggcggtgctggagaagg 98649
>dbj|AK107079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F07, full insert sequence Length = 929 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgccggcggcggggacgacga 134 ||||||||||||||||||||| Sbjct: 96 cgccggcggcggggacgacga 76
>dbj|AK071675.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105O05, full insert sequence Length = 859 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 cgccggcggcggggacgacga 134 ||||||||||||||||||||| Sbjct: 97 cgccggcggcggggacgacga 77
>dbj|AK068306.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H07, full insert sequence Length = 1612 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cgcgccggcggcggggacgacgacg 136 ||||||||||||| ||||||||||| Sbjct: 691 cgcgccggcggcgaggacgacgacg 715
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cgcgccggcggcggggacgacgacg 136 ||||||||||||| ||||||||||| Sbjct: 3495754 cgcgccggcggcgaggacgacgacg 3495778 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gccggcggcgctgagccaga 74 |||||||||||||||||||| Sbjct: 26201403 gccggcggcgctgagccaga 26201422
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 cgcgccggcggcggggacgacgacg 136 ||||||||||||| ||||||||||| Sbjct: 10737 cgcgccggcggcgaggacgacgacg 10761
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 cgcgccggcggcggggacgacgacg 136 ||||||||||||| ||||||||||| Sbjct: 36106 cgcgccggcggcgaggacgacgacg 36082
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgcc 493 |||||||| |||||||||||||||| Sbjct: 4266647 cgtcaccgtcaccagcaacagcgcc 4266671
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 ggcggcgccgaacgtgacggcggtg 172 ||||||||||| ||||||||||||| Sbjct: 240758 ggcggcgccgaccgtgacggcggtg 240782
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgcc 493 |||||||| |||||||||||||||| Sbjct: 4199425 cgtcaccgtcaccagcaacagcgcc 4199449
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgcc 493 |||||||| |||||||||||||||| Sbjct: 3246821 cgtcaccgtcaccagcaacagcgcc 3246845
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 cgtcaccgccaccagcaacagcgcc 493 |||||||| |||||||||||||||| Sbjct: 3641518 cgtcaccgtcaccagcaacagcgcc 3641542
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccaccagcaacagcgccg 494 |||||||||||||||||||| Sbjct: 1155587 cgccaccagcaacagcgccg 1155568
>ref|XM_475134.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2355 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcggggacgacgacg 136 ||||||||||| | |||||||||||||| Sbjct: 2097 ggacgcgccggggtcggggacgacgacg 2124
>ref|XM_474125.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 711 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 255 gccggcggcggggacgacga 274
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 gcgccggcggcggggacgacgacg 136 |||| ||||||||||||||||||| Sbjct: 3460718 gcgctggcggcggggacgacgacg 3460695
>ref|NM_190166.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1566 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcggggacgacgacg 136 |||| |||||||| |||||||||||||| Sbjct: 606 ggacacgccggcgacggggacgacgacg 633
>ref|NM_193139.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gcgccggcggcggggacgacgacg 136 ||||||||| |||||||||||||| Sbjct: 1115 gcgccggcgccggggacgacgacg 1138
>ref|XM_476603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 158 cggcggcggggacgacgacg 177
>ref|XM_470731.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccggcggcggggacgacgacgccc 139 |||||||||| ||||||||||||| Sbjct: 628 ccggcggcggcgacgacgacgccc 651
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 ccctgcaccgtcaacgtcaccgcc 478 ||||||||||||||||||| |||| Sbjct: 3956677 ccctgcaccgtcaacgtcagcgcc 3956700 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tgccggcggcgctgagccag 73 |||||||||||||||||||| Sbjct: 1114100 tgccggcggcgctgagccag 1114081
>gb|AC004507.1| Homo sapiens chromosome 5, P1 clone 798F12 (LBNL H82), complete sequence Length = 19911 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcgggga 128 |||||||||||||||||||| Sbjct: 2905 ggacgcgccggcggcgggga 2924
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 cgccggcggcggggacgacgacgc 137 |||||||| ||||||||||||||| Sbjct: 83145 cgccggcgtcggggacgacgacgc 83168
>ref|XM_367470.1| Magnaporthe grisea 70-15 chromosome III predicted protein (MG07381.4) partial mRNA Length = 852 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 tggcggcggcagtgccggcggcgc 65 |||||||||||||||| ||||||| Sbjct: 393 tggcggcggcagtgcccgcggcgc 416
>ref|XM_429534.1| PREDICTED: Gallus gallus LOC417893 (LOC417893), mRNA Length = 619 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ggcggcggcagtgccggcgg 62 |||||||||||||||||||| Sbjct: 232 ggcggcggcagtgccggcgg 251
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gcgccggacgcgccggcggc 123 |||||||||||||||||||| Sbjct: 2552392 gcgccggacgcgccggcggc 2552411 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gcgccggacgcgccggcggc 123 |||||||||||||||||||| Sbjct: 526254 gcgccggacgcgccggcggc 526235 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctcgtgcaggcgcacatcg 377 |||||||||||||||||||| Sbjct: 332965 gctcgtgcaggcgcacatcg 332946
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcggggacgacgacg 136 ||||||||||| | |||||||||||||| Sbjct: 108328 ggacgcgccggggtcggggacgacgacg 108355
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcaacagcctcaagccgggc 322 |||||||||||||||||||| Sbjct: 368926 tcaacagcctcaagccgggc 368945
>ref|XM_456032.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F21208g predicted mRNA Length = 5325 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 ccatggagtccttcgagaccgcca 416 |||||||||||||||| ||||||| Sbjct: 3851 ccatggagtccttcgaaaccgcca 3874
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcaacagcctcaagccgggc 322 |||||||||||||||||||| Sbjct: 373935 tcaacagcctcaagccgggc 373954
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccggcggcggggacgacgacgccc 139 |||||||||| ||||||||||||| Sbjct: 14806410 ccggcggcggcgacgacgacgccc 14806433
>ref|XM_862615.1| PREDICTED: Canis familiaris similar to Vacuolar ATP synthase subunit S1 precursor (V-ATPase S1 subunit) (V-ATPase S1 accessory protein) (V-ATPase Ac45 subunit) (XAP-3), transcript variant 2 (LOC610922), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 caccgccaccagcaacagcg 491 |||||||||||||||||||| Sbjct: 101 caccgccaccagcaacagcg 82
>ref|XM_848532.1| PREDICTED: Canis familiaris similar to Vacuolar ATP synthase subunit S1 precursor (V-ATPase S1 subunit) (V-ATPase S1 accessory protein) (V-ATPase Ac45 subunit) (XAP-3), transcript variant 1 (LOC610922), mRNA Length = 2059 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 caccgccaccagcaacagcg 491 |||||||||||||||||||| Sbjct: 123 caccgccaccagcaacagcg 104
>gb|DQ480515.1| Hepatitis C virus subtype 6a strain 6a64, complete genome Length = 9358 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 cggcagtgccggcggcgctg 67 |||||||||||||||||||| Sbjct: 2603 cggcagtgccggcggcgctg 2584
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 224698 cggcggcggggacgacgacg 224717 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 26637 cggcggcggggacgacgacg 26618
>gb|AE004134.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 42 of 251 of the complete chromosome Length = 10698 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gtcaccgccaccagcaacag 489 |||||||||||||||||||| Sbjct: 5417 gtcaccgccaccagcaacag 5398
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 314 aagccgggcaccctcaactcgctctcgc 341 |||||||||| | ||||||||||||||| Sbjct: 3322684 aagccgggcagcatcaactcgctctcgc 3322711
>gb|BT009007.1| Triticum aestivum clone wdk2c.pk019.h18:fis, full insert mRNA sequence Length = 681 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 ggggacgacgacgcccaaggtggcggcggcgc 155 ||||||||||||| ||||| |||||| ||||| Sbjct: 151 ggggacgacgacgaccaagctggcggaggcgc 182
>gb|BT009000.1| Triticum aestivum clone wdk2c.pk015.k3:fis, full insert mRNA sequence Length = 626 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 124 ggggacgacgacgcccaaggtggcggcggcgc 155 |||| |||||||| |||||||||||| ||||| Sbjct: 240 gggggcgacgacgaccaaggtggcggaggcgc 271
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 ccatggagtccttcgagaccgcca 416 |||||||||||||||| ||||||| Sbjct: 1979053 ccatggagtccttcgaaaccgcca 1979076
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 ggcgccggacgcgccggcggcggg 126 ||||||||||| |||||||||||| Sbjct: 6588 ggcgccggacgggccggcggcggg 6611
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 ggcgccggacgcgccggcggcggg 126 ||||||||||| |||||||||||| Sbjct: 10334 ggcgccggacgggccggcggcggg 10357
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 ggcgccggacgcgccggcggcggg 126 ||||||||||| |||||||||||| Sbjct: 104178 ggcgccggacgggccggcggcggg 104201
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gcgccggacgcgccggcggc 123 |||||||||||||||||||| Sbjct: 1845508 gcgccggacgcgccggcggc 1845489 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctcgtgcaggcgcacatcg 377 |||||||||||||||||||| Sbjct: 1652058 gctcgtgcaggcgcacatcg 1652039 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gcgccggacgcgccggcggc 123 |||||||||||||||||||| Sbjct: 732425 gcgccggacgcgccggcggc 732444
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cgtggtgctgctggcggcgg 50 |||||||||||||||||||| Sbjct: 996048 cgtggtgctgctggcggcgg 996067
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 gtgccggcggcgctgagcca 72 |||||||||||||||||||| Sbjct: 1515742 gtgccggcggcgctgagcca 1515723
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tgctgctggcggcggcagtg 55 |||||||||||||||||||| Sbjct: 2250709 tgctgctggcggcggcagtg 2250728
>gb|AC104704.1| Drosophila melanogaster 3L BAC RP98-8H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169705 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gtggtgctgctggcggcggc 51 |||||||||||||||||||| Sbjct: 28603 gtggtgctgctggcggcggc 28622
>gb|AE012537.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 445 of 460 of the complete genome Length = 11952 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ggcggcgccggacgcgccggcggc 123 ||||||||| |||||||||||||| Sbjct: 9483 ggcggcgcccgacgcgccggcggc 9460
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cgcccaaggtggcggcggcg 154 |||||||||||||||||||| Sbjct: 2552500 cgcccaaggtggcggcggcg 2552481
>ref|NM_168667.1| Drosophila melanogaster CG32159-RB (CG32159), mRNA Length = 3493 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtggtgctgctggcggcggc 51 |||||||||||||||||||| Sbjct: 1387 gtggtgctgctggcggcggc 1368
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 116 ccggcggcggggacgacgacgccc 139 |||||||||| ||||||||||||| Sbjct: 126358 ccggcggcggcgacgacgacgccc 126335
>gb|AY071185.1| Drosophila melanogaster RE23490 full length cDNA Length = 3508 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gtggtgctgctggcggcggc 51 |||||||||||||||||||| Sbjct: 1387 gtggtgctgctggcggcggc 1368
>ref|XM_943517.1| PREDICTED: Homo sapiens hypothetical protein LOC648944 (LOC648944), mRNA Length = 1470 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggacgcgccggcggcgggga 128 |||||||||||||||||||| Sbjct: 827 ggacgcgccggcggcgggga 808
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 cctccggcaccgacgggccc 457 |||||||||||||||||||| Sbjct: 3200632 cctccggcaccgacgggccc 3200651
>emb|AJ556181.1|OSA556181 Oryza sativa (japonica cultivar-group) partial mRNA for homeobox protein HB3 (hb3 gene) Length = 714 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 255 gccggcggcggggacgacga 274
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 1029529 cggcggcggggacgacgacg 1029510 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ccggacgcgccggcggcggg 126 |||||||||||||||||||| Sbjct: 1006333 ccggacgcgccggcggcggg 1006314
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ggcggcgccggacgcgccggcggc 123 ||||||||| |||||||||||||| Sbjct: 4990323 ggcggcgcccgacgcgccggcggc 4990300
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gctcgtgcaggcgcacatcg 377 |||||||||||||||||||| Sbjct: 1102503 gctcgtgcaggcgcacatcg 1102484 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gcgccggacgcgccggcggc 123 |||||||||||||||||||| Sbjct: 938364 gcgccggacgcgccggcggc 938383 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gcgccggacgcgccggcggc 123 |||||||||||||||||||| Sbjct: 463307 gcgccggacgcgccggcggc 463326
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 33130031 gccggcggcggggacgacga 33130012
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gcgccggcggcggggacgacgacg 136 ||||||||| |||||||||||||| Sbjct: 26341987 gcgccggcgccggggacgacgacg 26342010 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 2144424 cggcggcggggacgacgacg 2144443
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccggcggcggggacgacgacgccc 139 |||||||||| ||||||||||||| Sbjct: 14800944 ccggcggcggcgacgacgacgccc 14800967
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 cgcccaaggtggcggcggcgccga 158 |||| ||||||||||||||||||| Sbjct: 41857 cgccgaaggtggcggcggcgccga 41834
>ref|NM_204353.1| Gallus gallus insulin-like growth factor binding protein 4 (IGFBP4), mRNA Length = 1809 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 29 gccgtggtgctgctggcggcggcagtgccggcggcg 64 |||||| |||||||||||||||| | | |||||||| Sbjct: 53 gccgtgctgctgctggcggcggcggcggcggcggcg 88
>gb|AY230206.1| Gallus gallus insulin-like growth factor-binding protein-4 mRNA, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 29 gccgtggtgctgctggcggcggcagtgccggcggcg 64 |||||| |||||||||||||||| | | |||||||| Sbjct: 53 gccgtgctgctgctggcggcggcggcggcggcggcg 88
>dbj|AB192413.1| Gallus gallus IGFBP4 gene for insulin-like growth factor binding protein-4, complete cds Length = 5927 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 29 gccgtggtgctgctggcggcggcagtgccggcggcg 64 |||||| |||||||||||||||| | | |||||||| Sbjct: 713 gccgtgctgctgctggcggcggcggcggcggcggcg 748
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccaccagcaacagcgccg 494 |||||||||||||||||||| Sbjct: 1158480 cgccaccagcaacagcgccg 1158461
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 109 ggacgcgccggcggcggggacgacgacg 136 |||| |||||||| |||||||||||||| Sbjct: 152020 ggacacgccggcgacggggacgacgacg 151993
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gcgccggcggcggggacgacgacg 136 ||||||||| |||||||||||||| Sbjct: 61565 gcgccggcgccggggacgacgacg 61588
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cggcggggacgacgacgccc 139 |||||||||||||||||||| Sbjct: 1758492 cggcggggacgacgacgccc 1758473
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ccgtggtgctgctggcggcg 49 |||||||||||||||||||| Sbjct: 6329329 ccgtggtgctgctggcggcg 6329310
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 cgcacccaggcctccggcac 447 |||||||||||||||||||| Sbjct: 2323169 cgcacccaggcctccggcac 2323188
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 66345 gccggcggcggggacgacga 66364
>dbj|AB109791.1| Arthrobacter sp. BA-5-17 catR, catB, catC, catA-II genes for putative LysR -type regulator, cis,cis-muconate cycloisomerase, muconolactone isomerase, catechol 1,2-dioxygenase, complete cds Length = 4743 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ggcggcgccgaacgtgacgg 167 |||||||||||||||||||| Sbjct: 2902 ggcggcgccgaacgtgacgg 2883
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 12326 cggcggcggggacgacgacg 12345
>dbj|AK109822.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A09, full insert sequence Length = 1827 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcggggacgacgacg 136 |||| |||||||| |||||||||||||| Sbjct: 779 ggacacgccggcgacggggacgacgacg 806
>dbj|AK109054.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E08, full insert sequence Length = 1275 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 cgccggcggcggggacgacgacgc 137 |||||||| ||||||||||||||| Sbjct: 174 cgccggcgtcggggacgacgacgc 197
>ref|NM_210424.1| Eremothecium gossypii AER213Cp (AER213C), mRNA Length = 1674 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 315 cggcggcggggacgacgacg 334
>ref|NM_210406.1| Eremothecium gossypii AER195Cp (AER195C), mRNA Length = 1515 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ccggacgcgccggcggcggg 126 |||||||||||||||||||| Sbjct: 613 ccggacgcgccggcggcggg 632
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 agaggcggcgccggacgcgccggc 120 |||||||||||||||||| ||||| Sbjct: 2452588 agaggcggcgccggacgcaccggc 2452565
>dbj|AK064686.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D11, full insert sequence Length = 1125 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 109 ggacgcgccggcggcggggacgacgacg 136 ||||||||||| | |||||||||||||| Sbjct: 766 ggacgcgccggggtcggggacgacgacg 793
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 cggcggcggggacgacgacg 136 |||||||||||||||||||| Sbjct: 100217 cggcggcggggacgacgacg 100236
>gb|AY106069.1| Zea mays PCO155833 mRNA sequence Length = 603 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gtggtgctgctggcggcggc 51 |||||||||||||||||||| Sbjct: 133 gtggtgctgctggcggcggc 152
>tpe|BN000597.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx68 gene for class III peroxidase 68 precursor, exons 1-2 Length = 1347 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 cgccggcggcggggacgacgacgc 137 |||||||| ||||||||||||||| Sbjct: 89 cgccggcgtcggggacgacgacgc 112
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 20541 gccggcggcggggacgacga 20522
>gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58 of 83 of the complete sequence Length = 279904 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gtggtgctgctggcggcggc 51 |||||||||||||||||||| Sbjct: 146369 gtggtgctgctggcggcggc 146388
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ggcggcgccggacgcgccggcggc 123 |||||||||||| ||||||||||| Sbjct: 3005185 ggcggcgccggatgcgccggcggc 3005208
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 ccggcggcggggacgacgacgccc 139 |||||||||||| ||||||||||| Sbjct: 1928187 ccggcggcggggccgacgacgccc 1928210
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gccggcggcgctgagccaga 74 |||||||||||||||||||| Sbjct: 37211 gccggcggcgctgagccaga 37230
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 12681 gccggcggcggggacgacga 12662
>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21, complete sequence Length = 140626 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gccggcggcggggacgacga 134 |||||||||||||||||||| Sbjct: 139612 gccggcggcggggacgacga 139593
>dbj|D32251.1|STMBARA Streptomyces virginiae barA gene for virginiae butanolide receptor, complete cds Length = 1755 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 tcaccgccaccagcaacagcgccg 494 ||||||||| |||||||||||||| Sbjct: 1631 tcaccgccatcagcaacagcgccg 1654
>dbj|AB001609.1| Streptomyces virginiae DNA for BarB, complete cds Length = 1498 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 tcaccgccaccagcaacagcgccg 494 ||||||||| |||||||||||||| Sbjct: 470 tcaccgccatcagcaacagcgccg 493 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,546,547 Number of Sequences: 3902068 Number of extensions: 3546547 Number of successful extensions: 113193 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105762 Number of HSP's gapped (non-prelim): 7420 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
