ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33d02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473964.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||| | ||||||||||||||| ||||| ||| |||||||||||||| ||||| Sbjct: 224 cggacgaggtgaagacgctctggatcggcgacctgcagccctggatggacgagagctaca 283 Query: 373 tctacagctgcttcgccaacaccggggagttccaatctgtgaagcttatccgcgacaagc 432 |||||| ||||||||| |||||||||| | |||||||||||||||||||| ||||| | Sbjct: 284 tctacaactgcttcgcggccaccggggaggttcaatctgtgaagcttatccgggacaaac 343 Query: 433 agactgggcagcttcagggttatggctttgtcgagtttgcaagccatgcagctgctgagc 492 | | ||| ||||||||||||||||||||||| |||||| |||| | |||||||||||| | Sbjct: 344 aaagtggacagcttcagggttatggctttgttgagtttacaagtcgtgcagctgctgatc 403 Query: 493 gagttcttcagacattcaatggacaaatgatgccaaatgttgag 536 || |||||||||| | |||||||| |||||||| ||||||||| Sbjct: 404 gaattcttcagacttataatggacagatgatgccgaatgttgag 447 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 107 gccgccgcagggcgcgggagggcagccgccgcactggggcgcgatcccgccgccgatgcc 166 |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 18 gccgccacagggcgcggcggggcagccgccgcagtggggcgcgatcccgccgccgatgcc 77 Query: 167 gc 168 || Sbjct: 78 gc 79
>dbj|AK120834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019P13, full insert sequence Length = 1599 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||| | ||||||||||||||| ||||| ||| |||||||||||||| ||||| Sbjct: 318 cggacgaggtgaagacgctctggatcggcgacctgcagccctggatggacgagagctaca 377 Query: 373 tctacagctgcttcgccaacaccggggagttccaatctgtgaagcttatccgcgacaagc 432 |||||| ||||||||| |||||||||| | |||||||||||||||||||| ||||| | Sbjct: 378 tctacaactgcttcgcggccaccggggaggttcaatctgtgaagcttatccgggacaaac 437 Query: 433 agactgggcagcttcagggttatggctttgtcgagtttgcaagccatgcagctgctgagc 492 | | ||| ||||||||||||||||||||||| |||||| |||| | |||||||||||| | Sbjct: 438 aaagtggacagcttcagggttatggctttgttgagtttacaagtcgtgcagctgctgatc 497 Query: 493 gagttcttcagacattcaatggacaaatgatgccaaatgttgag 536 || |||||||||| | |||||||| |||||||| ||||||||| Sbjct: 498 gaattcttcagacttataatggacagatgatgccgaatgttgag 541 Score = 113 bits (57), Expect = 6e-22 Identities = 94/104 (90%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagccgggcatgggcgcccc-cat--gccgccgcagggcgcggg 124 ||||||||||||||||||||| |||||||||| ||| | | |||||| |||||||||| Sbjct: 70 gccgccgtcgcagccgcagcccggcatgggcggcccgcctccgccgccacagggcgcggc 129 Query: 125 agggcagccgccgcactggggcgcgatcccgccgccgatgccgc 168 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 130 ggggcagccgccgcagtggggcgcgatcccgccgccgatgccgc 173
>gb|BT009299.1| Triticum aestivum clone wlm1.pk0008.c11:fis, full insert mRNA sequence Length = 1344 Score = 210 bits (106), Expect = 4e-51 Identities = 121/126 (96%) Strand = Plus / Plus Query: 430 agcagactgggcagcttcagggttatggctttgtcgagtttgcaagccatgcagctgctg 489 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 8 agcaaactggacagcttcagggctatggctttgtcgagtttgcaagccatgcagcagctg 67 Query: 490 agcgagttcttcagacattcaatggacaaatgatgccaaatgttgagttggcatacagac 549 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 68 agcgagttcttcagacattcaatggtcaaatgatgccaaatgttgagttggcatacagac 127 Query: 550 tgaact 555 |||||| Sbjct: 128 tgaact 133
>gb|AY109460.1| Zea mays CL862_1 mRNA sequence Length = 1796 Score = 196 bits (99), Expect = 5e-47 Identities = 192/223 (86%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 409 cggacgaggtcaggacgctctggatcggggacctgcaatactggatggacgagaactatg 468 Query: 373 tctacagctgcttcgccaacaccggggagttccaatctgtgaagcttatccgcgacaagc 432 ||| | | ||||| | ||||| |||||| | ||| ||||||||| ||||| |||||| Sbjct: 469 tcttcgggtgcttttcgaacactggggaggttcaaaatgtgaagctcatccgtgacaaga 528 Query: 433 agactgggcagcttcagggttatggctttgtcgagtttgcaagccatgcagctgctgagc 492 | | |||||||||||||| ||||| ||||| || ||| |||||| ||||||||| || | Sbjct: 529 attcagggcagcttcagggctatggttttgttgaatttacaagccgtgcagctgcagaac 588 Query: 493 gagttcttcagacattcaatggacaaatgatgccaaatgttga 535 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 589 gagttcttcagacatataatggacaaatgatgccaaatgttga 631 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 126 gggcagccgccgcactggggcgcgatcccgccgccgatgccgca 169 |||||||| ||||| |||||||||||||||||||||||| |||| Sbjct: 220 gggcagccaccgcagtggggcgcgatcccgccgccgatgacgca 263
>ref|XM_480466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1284 Score = 176 bits (89), Expect = 5e-41 Identities = 188/221 (85%) Strand = Plus / Plus Query: 316 acgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatct 375 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 275 acgaggtcaggacgctctggatcggggatctccagtactggatggatgagaactacatct 334 Query: 376 acagctgcttcgccaacaccggggagttccaatctgtgaagcttatccgcgacaagcaga 435 | |||||| || |||||| ||| | |||||||||||||| || || |||||||||| Sbjct: 335 ccgcctgctttgcgcccaccggcgagctacaatctgtgaagctaattcgtgacaagcaga 394 Query: 436 ctgggcagcttcagggttatggctttgtcgagtttgcaagccatgcagctgctgagcgag 495 |||| || |||||||||||||||||| | || || || |||||| | |||||| ||| Sbjct: 395 ctggacaacttcagggttatggctttattgaattcacatcccatgctggtgctgaaagag 454 Query: 496 ttcttcagacattcaatggacaaatgatgccaaatgttgag 536 ||||||| |||| |||||| ||||||||||||||||||| Sbjct: 455 ttcttcaaacatacaatggggcaatgatgccaaatgttgag 495
>dbj|AK072804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135B10, full insert sequence Length = 1693 Score = 151 bits (76), Expect = 3e-33 Identities = 175/208 (84%) Strand = Plus / Plus Query: 329 gctctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgc 388 ||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||| || Sbjct: 440 gctctggatcggggatctccagtactggatggatgagaactacatctccgcctgctttgc 499 Query: 389 caacaccggggagttccaatctgtgaagcttatccgcgacaagcagactgggcagcttca 448 |||||| ||| | |||||||||||||| || || |||||||||||||| || ||||| Sbjct: 500 gcccaccggcgagctacaatctgtgaagctaattcgtgacaagcagactggacaacttca 559 Query: 449 gggttatggctttgtcgagtttgcaagccatgcagctgctgagcgagttcttcagacatt 508 ||||||||||||| | || || || |||||| | |||||| |||||||||| |||| Sbjct: 560 gggttatggctttattgaattcacatcccatgctggtgctgaaagagttcttcaaacata 619 Query: 509 caatggacaaatgatgccaaatgttgag 536 |||||| ||||||||||||||||||| Sbjct: 620 caatggggcaatgatgccaaatgttgag 647
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||||| ||||| || | ||| ||||||||||||||||||||||| Sbjct: 21257 caatctgtgaagcttatccgggacaaacaaagtggacagcttcagggttatggctttgtt 21316 Query: 465 gagtttgcaagccatgcagctgctgagcgagttcttcagacattcaatggacaaatgatg 524 |||||| |||| | |||||||||||| ||| |||||||||| | |||||||| |||||| Sbjct: 21317 gagtttacaagtcgtgcagctgctgatcgaattcttcagacttataatggacagatgatg 21376 Query: 525 ccaaatgttgag 536 || ||||||||| Sbjct: 21377 ccgaatgttgag 21388 Score = 121 bits (61), Expect = 3e-24 Identities = 95/104 (91%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagccgggcatgggcgcccc-cat--gccgccgcagggcgcggg 124 ||||||||||||||||||||| |||||||||| ||| | | ||||||||||||||||| Sbjct: 20391 gccgccgtcgcagccgcagcccggcatgggcggcccgcctccgccgccgcagggcgcggc 20450 Query: 125 agggcagccgccgcactggggcgcgatcccgccgccgatgccgc 168 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 20451 ggggcagccgccgcagtggggcgcgatcccgccgccgatgccgc 20494 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||| | ||||||||||||||| ||||| ||| |||||||||||||| ||||| Sbjct: 20639 cggacgaggtgaagacgctctggatcggcgacctgcagccctggatggacgagagctaca 20698 Query: 373 tctacagctgcttcgccaacaccggggag 401 |||||| ||||||||| |||||||||| Sbjct: 20699 tctacaactgcttcgcggccaccggggag 20727
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||||| ||||| || | ||| ||||||||||||||||||||||| Sbjct: 27183 caatctgtgaagcttatccgggacaaacaaagtggacagcttcagggttatggctttgtt 27242 Query: 465 gagtttgcaagccatgcagctgctgagcgagttcttcagacattcaatggacaaatgatg 524 |||||| |||| | |||||||||||| ||| |||||||||| | |||||||| |||||| Sbjct: 27243 gagtttacaagtcgtgcagctgctgatcgaattcttcagacttataatggacagatgatg 27302 Query: 525 ccaaatgttgag 536 || ||||||||| Sbjct: 27303 ccgaatgttgag 27314 Score = 113 bits (57), Expect = 6e-22 Identities = 94/104 (90%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagccgggcatgggcgcccc-cat--gccgccgcagggcgcggg 124 ||||||||||||||||||||| |||||||||| ||| | | |||||| |||||||||| Sbjct: 26318 gccgccgtcgcagccgcagcccggcatgggcggcccgcctccgccgccacagggcgcggc 26377 Query: 125 agggcagccgccgcactggggcgcgatcccgccgccgatgccgc 168 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 26378 ggggcagccgccgcagtggggcgcgatcccgccgccgatgccgc 26421 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||| | ||||||||||||||| ||||| ||| |||||||||||||| ||||| Sbjct: 26566 cggacgaggtgaagacgctctggatcggcgacctgcagccctggatggacgagagctaca 26625 Query: 373 tctacagctgcttcgccaacaccggggag 401 |||||| ||||||||| |||||||||| Sbjct: 26626 tctacaactgcttcgcggccaccggggag 26654
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||||| ||||| || | ||| ||||||||||||||||||||||| Sbjct: 31854317 caatctgtgaagcttatccgggacaaacaaagtggacagcttcagggttatggctttgtt 31854376 Query: 465 gagtttgcaagccatgcagctgctgagcgagttcttcagacattcaatggacaaatgatg 524 |||||| |||| | |||||||||||| ||| |||||||||| | |||||||| |||||| Sbjct: 31854377 gagtttacaagtcgtgcagctgctgatcgaattcttcagacttataatggacagatgatg 31854436 Query: 525 ccaaatgttgag 536 || ||||||||| Sbjct: 31854437 ccgaatgttgag 31854448 Score = 113 bits (57), Expect = 6e-22 Identities = 94/104 (90%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagccgggcatgggcgcccc-cat--gccgccgcagggcgcggg 124 ||||||||||||||||||||| |||||||||| ||| | | |||||| |||||||||| Sbjct: 31853452 gccgccgtcgcagccgcagcccggcatgggcggcccgcctccgccgccacagggcgcggc 31853511 Query: 125 agggcagccgccgcactggggcgcgatcccgccgccgatgccgc 168 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31853512 ggggcagccgccgcagtggggcgcgatcccgccgccgatgccgc 31853555 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||| | ||||||||||||||| ||||| ||| |||||||||||||| ||||| Sbjct: 31853700 cggacgaggtgaagacgctctggatcggcgacctgcagccctggatggacgagagctaca 31853759 Query: 373 tctacagctgcttcgccaacaccggggag 401 |||||| ||||||||| |||||||||| Sbjct: 31853760 tctacaactgcttcgcggccaccggggag 31853788 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 342 gacctccagtactggatggacgagaactacatctacagctgcttcg 387 ||||||||||| |||||||||||||||||| || ||||||| |||| Sbjct: 22389554 gacctccagtattggatggacgagaactacctccacagctgtttcg 22389599 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgccccagg 210 |||| |||||||||||||||||||| |||| Sbjct: 21382005 cgccgccgcagcagcagccgccgccgcagg 21382034 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcagcagcagccgccgcccc 207 |||||||||||||||||||| Sbjct: 33789604 gcagcagcagccgccgcccc 33789623 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgatcccgccgccgatgccg 167 |||||||||||||||||||| Sbjct: 31265769 cgatcccgccgccgatgccg 31265788
>dbj|AK104916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E08, full insert sequence Length = 1569 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatctac 377 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| Sbjct: 107 gaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctac 166 Query: 378 agctgcttcgccaacaccggggagttccaatctgt 412 | |||||||||| ||||||| ||||| |||||||| Sbjct: 167 aactgcttcgcccacaccggcgagttacaatctgt 201
>dbj|AK065337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M06, full insert sequence Length = 1559 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatctac 377 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| Sbjct: 133 gaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctac 192 Query: 378 agctgcttcgccaacaccggggagttccaatctgt 412 | |||||||||| ||||||| ||||| |||||||| Sbjct: 193 aactgcttcgcccacaccggcgagttacaatctgt 227
>emb|AL606645.2|OSJN00079 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053K19, complete sequence Length = 187601 Score = 113 bits (57), Expect = 6e-22 Identities = 94/104 (90%), Gaps = 3/104 (2%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagccgggcatgggcgcccc-cat--gccgccgcagggcgcggg 124 ||||||||||||||||||||| |||||||||| ||| | | |||||| |||||||||| Sbjct: 186722 gccgccgtcgcagccgcagcccggcatgggcggcccgcctccgccgccacagggcgcggc 186781 Query: 125 agggcagccgccgcactggggcgcgatcccgccgccgatgccgc 168 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 186782 ggggcagccgccgcagtggggcgcgatcccgccgccgatgccgc 186825 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 313 cggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactaca 372 |||||||||| | ||||||||||||||| ||||| ||| |||||||||||||| ||||| Sbjct: 186970 cggacgaggtgaagacgctctggatcggcgacctgcagccctggatggacgagagctaca 187029 Query: 373 tctacagctgcttcgccaacaccggggag 401 |||||| ||||||||| |||||||||| Sbjct: 187030 tctacaactgcttcgcggccaccggggag 187058
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatctac 377 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| Sbjct: 3952023 gaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctac 3952082 Query: 378 agctgcttcgccaacaccgg 397 | |||||||||| ||||||| Sbjct: 3952083 aactgcttcgcccacaccgg 3952102 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 cagccaccgccgccgtcgcagccgcagccg 89 |||||||| || |||||||||||||||||| Sbjct: 29092843 cagccaccacctccgtcgcagccgcagccg 29092872 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccatgatgcagccaccgccgccgtcgcag 80 |||||||||||||| ||||||||| ||||| Sbjct: 20468504 gccatgatgcagccgccgccgccgccgcag 20468475 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||||||| |||||||||| Sbjct: 20913777 ccgccgccgtcgccgccgcagccg 20913800 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 11210980 ccgccgccgccgcagccgcagccg 11211003 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||||||| ||||| |||| Sbjct: 3504106 gccaccgccgccgtcgctgccgctgccg 3504133 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgca 85 ||||||||||||| |||||||||| Sbjct: 772366 gccaccgccgccgccgcagccgca 772343
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatctac 377 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| Sbjct: 147345 gaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctac 147286 Query: 378 agctgcttcgccaacaccgg 397 | |||||||||| ||||||| Sbjct: 147285 aactgcttcgcccacaccgg 147266
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 316 acgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatct 375 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 5266434 acgaggtcaggacgctctggatcggggatctccagtactggatggatgagaactacatct 5266375 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||| || || |||||||||||||| || |||||||||||||||||| | Sbjct: 5265722 caatctgtgaagctaattcgtgacaagcagactggacaacttcagggttatggctttatt 5265663 Query: 465 gagtttgcaagccatgcagctgctgagcgagttcttcagacattcaatggacaaatgatg 524 || || || |||||| | |||||| |||||||||| |||| |||||| ||||||| Sbjct: 5265662 gaattcacatcccatgctggtgctgaaagagttcttcaaacatacaatggggcaatgatg 5265603 Query: 525 ccaaatgttgag 536 |||||||||||| Sbjct: 5265602 ccaaatgttgag 5265591 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cgcagcagcagccgccgccc 206 |||||||||||||||||||| Sbjct: 26224689 cgcagcagcagccgccgccc 26224708 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 |||||||||| ||||||||||||| Sbjct: 3095906 ccgccgccgtagcagccgcagccg 3095883
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatctac 377 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| Sbjct: 3952134 gaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctac 3952193 Query: 378 agctgcttcgccaacaccgg 397 | |||||||||| ||||||| Sbjct: 3952194 aactgcttcgcccacaccgg 3952213 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 cagccaccgccgccgtcgcagccgcagccg 89 |||||||| || |||||||||||||||||| Sbjct: 29184265 cagccaccacctccgtcgcagccgcagccg 29184294 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccatgatgcagccaccgccgccgtcgcag 80 |||||||||||||| ||||||||| ||||| Sbjct: 20461533 gccatgatgcagccgccgccgccgccgcag 20461504 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||||||| |||||||||| Sbjct: 20906806 ccgccgccgtcgccgccgcagccg 20906829 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 11207743 ccgccgccgccgcagccgcagccg 11207766 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||||||| ||||| |||| Sbjct: 3504217 gccaccgccgccgtcgctgccgctgccg 3504244 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgca 85 ||||||||||||| |||||||||| Sbjct: 772364 gccaccgccgccgccgcagccgca 772341
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatctac 377 ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| Sbjct: 158496 gaggtcaggacgctctggatcggcgacctccagtactgggccgacgagaactacctctac 158555 Query: 378 agctgcttcgccaacaccgg 397 | |||||||||| ||||||| Sbjct: 158556 aactgcttcgcccacaccgg 158575
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1099H05 Length = 186036 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 316 acgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatct 375 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 134790 acgaggtcaggacgctctggatcggggatctccagtactggatggatgagaactacatct 134731 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||| || || |||||||||||||| || |||||||||||||||||| | Sbjct: 134078 caatctgtgaagctaattcgtgacaagcagactggacaacttcagggttatggctttatt 134019 Query: 465 gagtttgcaagccatgcagctgctgagcgagttcttcagacattcaatggacaaatgatg 524 || || || |||||| | |||||| |||||||||| |||| |||||| ||||||| Sbjct: 134018 gaattcacatcccatgctggtgctgaaagagttcttcaaacatacaatggggcaatgatg 133959 Query: 525 ccaaatgttgag 536 |||||||||||| Sbjct: 133958 ccaaatgttgag 133947
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0610E02 Length = 135816 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 316 acgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatct 375 |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 58022 acgaggtcaggacgctctggatcggggatctccagtactggatggatgagaactacatct 57963 Score = 95.6 bits (48), Expect = 1e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||| || || |||||||||||||| || |||||||||||||||||| | Sbjct: 57310 caatctgtgaagctaattcgtgacaagcagactggacaacttcagggttatggctttatt 57251 Query: 465 gagtttgcaagccatgcagctgctgagcgagttcttcagacattcaatggacaaatgatg 524 || || || |||||| | |||||| |||||||||| |||| |||||| ||||||| Sbjct: 57250 gaattcacatcccatgctggtgctgaaagagttcttcaaacatacaatggggcaatgatg 57191 Query: 525 ccaaatgttgag 536 |||||||||||| Sbjct: 57190 ccaaatgttgag 57179
>gb|AY109704.1| Zea mays CL776_1 mRNA sequence Length = 1722 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 333 tggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgccaac 392 |||||||| |||||||||||||||| |||||||||||| |||||||||||||||| || Sbjct: 234 tggatcggcgacctccagtactggaccgacgagaactacctctacagctgcttcgctcac 293 Query: 393 accggggagttccaatctgt 412 ||||||||| | |||||||| Sbjct: 294 accggggaggtacaatctgt 313
>gb|AY107267.1| Zea mays PCO073795 mRNA sequence Length = 1599 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 314 ggacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacat 373 |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 334 ggacgaggcgaggaccctctggatcggggacctgcagtactggatggatgagaactacct 393 Query: 374 ctacagctgcttc 386 ||| ||||||||| Sbjct: 394 ctatagctgcttc 406
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 331 tctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgcca 390 ||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||| | Sbjct: 17444595 tctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggct 17444654 Query: 391 acaccgg 397 ||||||| Sbjct: 17444655 acaccgg 17444661 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 19819379 ccgccgccgccgcagccgcagccg 19819356 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 cgccgccgtcgcagccgcagccgg 90 |||||||| ||||||||||||||| Sbjct: 8559289 cgccgccgccgcagccgcagccgg 8559312
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 331 tctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgcca 390 ||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||| | Sbjct: 8773 tctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggct 8832 Query: 391 acaccgg 397 ||||||| Sbjct: 8833 acaccgg 8839
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 331 tctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgcca 390 ||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||| | Sbjct: 168508 tctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggct 168567 Query: 391 acaccgg 397 ||||||| Sbjct: 168568 acaccgg 168574
>dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N13, full insert sequence Length = 1615 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 331 tctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgcca 390 ||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||| | Sbjct: 352 tctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggct 411 Query: 391 acaccgg 397 ||||||| Sbjct: 412 acaccgg 418
>dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G08, full insert sequence Length = 1356 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 331 tctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgcca 390 ||||| |||| |||||||| ||||||||||||||||||||| || |||||||||||| | Sbjct: 96 tctgggtcggcgacctccactactggatggacgagaactacctccacagctgcttcggct 155 Query: 391 acaccgg 397 ||||||| Sbjct: 156 acaccgg 162
>gb|AY110611.1| Zea mays CL773_-1 mRNA sequence Length = 1771 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 331 tctggatcggggacctccagtactggatggacgagaactacatctacagctgcttcgcca 390 ||||| |||| |||||||| ||||||||||||||||||||| | |||||||||||| | Sbjct: 448 tctgggtcggcgacctccattactggatggacgagaactacctacacagctgcttcggct 507 Query: 391 acaccgg 397 ||||||| Sbjct: 508 acaccgg 514 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 418 ttatccgcgacaagcagactgggcag 443 |||||||| ||||||||||||||||| Sbjct: 535 ttatccgcaacaagcagactgggcag 560
>ref|XM_478418.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1302 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 166 gacgagatcaggtcgctgtggatcggggatctccagtactggatggatgagagctac 222
>ref|XM_478419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1156 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 266 gacgagatcaggtcgctgtggatcggggatctccagtactggatggatgagagctac 322
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 19867129 gacgagatcaggtcgctgtggatcggggatctccagtactggatggatgagagctac 19867185 Score = 50.1 bits (25), Expect = 0.008 Identities = 83/102 (81%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||| | || || || | ||| || ||||||||||||| |||||| Sbjct: 18414936 caatctgtgaagcttatctgggataaacaaagtggacaacttcagggttatgactttgtt 18414877 Query: 465 gagtttgcaagc----catgcagctgctgagcgagttcttca 502 ||| || ||||| || ||||||||||| | ||||||||| Sbjct: 18414876 gagattacaagcgttgcaggcagctgctgatcaagttcttca 18414835 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 171 tacgcgcagccgcccccgcagcagcagc 198 |||||||||||||| || |||||||||| Sbjct: 23728945 tacgcgcagccgccgccccagcagcagc 23728972 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||| ||| |||||||||| Sbjct: 23182199 gccaccgccgccgccgcggccgcagccg 23182226 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||||||||||||| |||| Sbjct: 16432541 ccgccgccgtcgcagccgccgccg 16432518 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ccaccgccgccgtcgcagcc 82 |||||||||||||||||||| Sbjct: 6787465 ccaccgccgccgtcgcagcc 6787484
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 31779 gacgagatcaggtcgctgtggatcggggatctccagtactggatggatgagagctac 31835
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 107288 gacgagatcaggtcgctgtggatcggggatctccagtactggatggatgagagctac 107344
>dbj|AK062798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C10, full insert sequence Length = 1157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 |||||| ||||| |||| ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 267 gacgagatcaggtcgctgtggatcggggatctccagtactggatggatgagagctac 323
>gb|AY107556.1| Zea mays PCO141359 mRNA sequence Length = 378 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 321 gtcaggacgctctggatcggggacctccagtactggatggacgagaactac 371 ||||||||||| |||||||| || || ||| |||||||||||||||||||| Sbjct: 249 gtcaggacgctgtggatcggagatcttcagcactggatggacgagaactac 299
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 |||||||||||||||||||||||||||||| Sbjct: 46431 gcagccgcccccgcagcagcagccgccgcc 46460
>ref|NM_002516.1| Homo sapiens neuro-oncological ventral antigen 2 (NOVA2), mRNA Length = 1857 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgccgccccaggcc 212 |||||||||| | ||||||||||||||||||||||||| Sbjct: 5 cgcagccgccgcagcagcagcagccgccgccccaggcc 42
>ref|XM_989522.1| PREDICTED: Mus musculus meningioma 1 (Mn1), mRNA Length = 5002 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 |||||||||||||||||||||||||||||| Sbjct: 1029 gcagccgcccccgcagcagcagccgccgcc 1058
>ref|XM_913372.2| PREDICTED: Mus musculus meningioma 1, transcript variant 1 (Mn1), mRNA Length = 6121 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 |||||||||||||||||||||||||||||| Sbjct: 1029 gcagccgcccccgcagcagcagccgccgcc 1058
>ref|XM_485667.3| PREDICTED: Mus musculus meningioma 1, transcript variant 1 (Mn1), mRNA Length = 6128 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 |||||||||||||||||||||||||||||| Sbjct: 1029 gcagccgcccccgcagcagcagccgccgcc 1058
>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence Length = 193861 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 |||||||||||||||||||||||||||||| Sbjct: 163837 gcagccgcccccgcagcagcagccgccgcc 163866
>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence Length = 256298 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 175 cgcagccgcccccgcagcagcagccgccgccccaggcc 212 |||||||||| | ||||||||||||||||||||||||| Sbjct: 8887 cgcagccgccgcagcagcagcagccgccgccccaggcc 8850
>gb|AC011545.4|AC011545 Homo sapiens chromosome 19, cosmid R30477 (LLNL-R_266D1), complete sequence Length = 38611 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 175 cgcagccgcccccgcagcagcagccgccgccccaggcc 212 |||||||||| | ||||||||||||||||||||||||| Sbjct: 5316 cgcagccgccgcagcagcagcagccgccgccccaggcc 5279
>dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B01, full insert sequence Length = 1632 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 342 gacctccagtactggatggacgagaactacatctacagctgcttcg 387 ||||||||||| |||||||||||||||||| || ||||||| |||| Sbjct: 405 gacctccagtattggatggacgagaactacctccacagctgtttcg 450
>gb|AF083898.1|AF083898 Homo sapiens RNA-binding protein Nova-2 mRNA, complete cds Length = 1857 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgccgccccaggcc 212 |||||||||| | ||||||||||||||||||||||||| Sbjct: 5 cgcagccgccgcagcagcagcagccgccgccccaggcc 42
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 342 gacctccagtactggatggacgagaactacatctacagctgcttcg 387 ||||||||||| |||||||||||||||||| || ||||||| |||| Sbjct: 140460 gacctccagtattggatggacgagaactacctccacagctgtttcg 140505
>gb|AC170864.2| Mus musculus BAC clone RP24-576D1 from chromosome 7, complete sequence Length = 208952 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 175 cgcagccgcccccgcagcagcagccgccgccccaggcc 212 |||||||||| | ||||||||||||||||||||||||| Sbjct: 160926 cgcagccgccgcagcagcagcagccgccgccccaggcc 160889
>gb|BT018852.1| Zea mays clone EL01N0555H08.d mRNA sequence Length = 1780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaacta 370 ||||||||||| || ||||| || || || ||||||||||||||||||||||| Sbjct: 454 gaggtcaggaccctgtggattggagatcttcagtactggatggacgagaacta 506
>gb|BT009008.1| Triticum aestivum clone wdk3c.pk0003.a5:fis, full insert mRNA sequence Length = 548 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 322 tcaggacgctctggatcggggacctccagtactggatggacgagaactacatctaca 378 ||||| |||| |||||||| || ||||||||||||||||| |||| |||| |||||| Sbjct: 175 tcaggtcgctgtggatcggagatctccagtactggatggatgagacctacctctaca 119
>gb|AY109669.1| Zea mays CL866_1 mRNA sequence Length = 1821 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 318 gaggtcaggacgctctggatcggggacctccagtactggatggacgagaacta 370 ||||||||||| || ||||| || || || ||||||||||||||||||||||| Sbjct: 467 gaggtcaggaccctgtggattggagatcttcagtactggatggacgagaacta 519
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||| | || || || | ||| || ||||||||||||| |||||| Sbjct: 11494201 caatctgtgaagcttatctgggataaacaaagtggacaacttcagggttatgactttgtt 11494260 Query: 465 gagtttgcaagc 476 |||||| ||||| Sbjct: 11494261 gagtttacaagc 11494272 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cgcccccgcagcagcagccgccgcc 205 |||| |||||||||||||||||||| Sbjct: 6736201 cgccgccgcagcagcagccgccgcc 6736177 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gcagccaccgccgccgtcgc 78 |||||||||||||||||||| Sbjct: 17187067 gcagccaccgccgccgtcgc 17187086 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 15901789 ccgcagcagcagccgccgcc 15901808 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||||||||||||| |||| Sbjct: 163862 ccgccgccgtcgcagccgctgccg 163885
>gb|AC158180.2| Selaginella moellendorffii chromosome JGIASXY-5A14, complete sequence Length = 36906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 326 gacgctctggatcggggacctccagtactggatggacgagaactacatctacagctgctt 385 |||||||||| | || || ||||||||||||||||||||| |||| |||| |||||||| Sbjct: 7110 gacgctctgggtgggcgatctccagtactggatggacgagggctacctctatagctgctt 7169
>dbj|AP006054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417E03 Length = 133019 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||| | || || || | ||| || ||||||||||||| |||||| Sbjct: 63444 caatctgtgaagcttatctgggataaacaaagtggacaacttcagggttatgactttgtt 63503 Query: 465 gagtttgcaagc 476 |||||| ||||| Sbjct: 63504 gagtttacaagc 63515
>gb|BC105181.1| Bos taurus tubulin, beta 2A, mRNA (cDNA clone MGC:128183 IMAGE:7898040), complete cds Length = 1586 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgccgcc 205 ||||||||||||||| ||||||||||||||| Sbjct: 49 cgcagccgcccccgctgcagcagccgccgcc 79
>ref|NM_001034663.1| Bos taurus tubulin, beta 2A (TUBB2A), mRNA Length = 1586 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgccgcc 205 ||||||||||||||| ||||||||||||||| Sbjct: 49 cgcagccgcccccgctgcagcagccgccgcc 79
>dbj|AB236792.1| Trifolium pratense RNA for putative DNA binding protein, partial cds, clone: C1861 Length = 1438 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaactacatc 374 ||||||||| | || ||||||||||| || | ||||| |||||||||||||| || || Sbjct: 162 gacgaggtccgtactctctggatcggcgatttgcagtattggatggacgagaattatctc 221 Query: 375 tacagctgcttcgccaacaccgg 397 |||| |||||||| |||||||| Sbjct: 222 tacacctgcttcggtaacaccgg 244
>ref|XM_466313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1191 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 337 tcggggacctccagtactggatggacgag 365 ||||||| ||||||||||||||||||||| Sbjct: 347 tcggggatctccagtactggatggacgag 375
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 337 tcggggacctccagtactggatggacgag 365 ||||||| ||||||||||||||||||||| Sbjct: 21616091 tcggggatctccagtactggatggacgag 21616119 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 ccaccgccgccgtcgcagccgcagccg 89 |||||||||||| |||||||||||||| Sbjct: 1075343 ccaccgccgccgccgcagccgcagccg 1075369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tgcagccaccgccgccgtcgc 78 ||||||||||||||||||||| Sbjct: 7308575 tgcagccaccgccgccgtcgc 7308555 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cgccgccgtcgcagccgcag 86 |||||||||||||||||||| Sbjct: 25914735 cgccgccgtcgcagccgcag 25914754 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 22682409 ccgcagcagcagccgccgcc 22682390 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagc 198 |||||||||| ||||||||||||| Sbjct: 22353202 cgcagccgccaccgcagcagcagc 22353225
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 337 tcggggacctccagtactggatggacgag 365 ||||||| ||||||||||||||||||||| Sbjct: 105041 tcggggatctccagtactggatggacgag 105069
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_B11 Length = 102824 Score = 50.1 bits (25), Expect = 0.008 Identities = 83/102 (81%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||| | || || || | ||| || ||||||||||||| |||||| Sbjct: 6784 caatctgtgaagcttatctgggataaacaaagtggacaacttcagggttatgactttgtt 6725 Query: 465 gagtttgcaagc----catgcagctgctgagcgagttcttca 502 ||| || ||||| || ||||||||||| | ||||||||| Sbjct: 6724 gagattacaagcgttgcaggcagctgctgatcaagttcttca 6683
>dbj|AP004266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F10 Length = 153929 Score = 50.1 bits (25), Expect = 0.008 Identities = 83/102 (81%), Gaps = 4/102 (3%) Strand = Plus / Minus Query: 405 caatctgtgaagcttatccgcgacaagcagactgggcagcttcagggttatggctttgtc 464 |||||||||||||||||| | || || || | ||| || ||||||||||||| |||||| Sbjct: 144431 caatctgtgaagcttatctgggataaacaaagtggacaacttcagggttatgactttgtt 144372 Query: 465 gagtttgcaagc----catgcagctgctgagcgagttcttca 502 ||| || ||||| || ||||||||||| | ||||||||| Sbjct: 144371 gagattacaagcgttgcaggcagctgctgatcaagttcttca 144330
>gb|AY168540.1| Hipposideros commersoni transcription factor sox-9 (sox9) gene, partial cds Length = 651 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgccgcccc 207 ||||| |||||||||||||||||||| |||||| Sbjct: 294 cgcaggcgcccccgcagcagcagccggcgcccc 326
>ref|XM_511156.1| PREDICTED: Pan troglodytes similar to microtubule-associated proteins 1A/1B light chain 3 (LOC454298), mRNA Length = 1192 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgcccc 207 |||| |||||||||||||||||||||| Sbjct: 722 cgccgccgcagcagcagccgccgcccc 748
>ref|XM_518475.1| PREDICTED: Pan troglodytes similar to transcriptional regulating factor 1 isoform 1; transcriptional regulating protein 132; rapa-2; rapa-1 (LOC462695), mRNA Length = 4734 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgc 201 |||||||||| |||||||||||||||| Sbjct: 1529 cgcagccgccgccgcagcagcagccgc 1555
>gb|BT017038.1| Zea mays clone EL01N0202F05.c mRNA sequence Length = 589 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 164 gccgcactacgcgcagccgcccccgcagcagcagc 198 |||||| |||||||||||||| || |||||||||| Sbjct: 235 gccgcagtacgcgcagccgcctccacagcagcagc 269
>gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence Length = 1456 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 337 tcggggacctccagtactggatggacgagaactac 371 |||| |||||||||||||||||||| || |||||| Sbjct: 170 tcggtgacctccagtactggatggatgaaaactac 204
>ref|XM_591639.2| PREDICTED: Bos taurus similar to phosphofurin acidic cluster sorting protein 1 (LOC513882), partial mRNA Length = 1599 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagccgccgcc 205 |||||||||| ||||||||||||| |||||| Sbjct: 89 cgcagccgccgccgcagcagcagcagccgcc 119
>gb|BC030341.1| Mus musculus transmembrane protein 64, mRNA (cDNA clone MGC:40684 IMAGE:3661112), complete cds Length = 3314 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcc 205 |||||| |||||||||||||||||||| Sbjct: 320 gccgccgccgcagcagcagccgccgcc 294
>gb|AY147882.1| Mus musculus tissue-type kidney chromosome 4 unknown mRNA Length = 3309 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcc 205 |||||| |||||||||||||||||||| Sbjct: 320 gccgccgccgcagcagcagccgccgcc 294
>gb|AC022022.10| Homo sapiens chromosome 10 clone RP11-351O1, complete sequence Length = 183604 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 60 cagccaccgccgccgtcgcagccgcag 86 ||||| ||||||||||||||||||||| Sbjct: 169974 cagccgccgccgccgtcgcagccgcag 169948
>dbj|AK156282.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830014M12 product:Similar to LD47277p, full insert sequence Length = 3308 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcc 205 |||||| |||||||||||||||||||| Sbjct: 365 gccgccgccgcagcagcagccgccgcc 339
>dbj|AK170682.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113L19 product:Similar to LD47277p homolog [Mus musculus], full insert sequence Length = 4388 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcc 205 |||||| |||||||||||||||||||| Sbjct: 33 gccgccgccgcagcagcagccgccgcc 7
>gb|AC004596.2| Homo sapiens chromosome 17, clone CTB-175E5, complete sequence Length = 92000 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgccccag 209 |||||| | |||||||||||||||||||||| Sbjct: 2207 gccgccacagcagcagcagccgccgccccag 2237
>ref|NM_181401.2| Mus musculus transmembrane protein 64 (Tmem64), mRNA Length = 3314 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcc 205 |||||| |||||||||||||||||||| Sbjct: 320 gccgccgccgcagcagcagccgccgcc 294
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 ccaccgccgccgtcgcagccgcagccg 89 |||||||||||| |||||||||||||| Sbjct: 27867 ccaccgccgccgccgcagccgcagccg 27893
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 63 ccaccgccgccgtcgcagccgcagccg 89 |||||||||||| |||||||||||||| Sbjct: 64051 ccaccgccgccgccgcagccgcagccg 64077
>gb|AY105063.1| Zea mays PCO152568 mRNA sequence Length = 672 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 164 gccgcactacgcgcagccgcccccgcagcagcagc 198 |||||| |||||||||||||| || |||||||||| Sbjct: 325 gccgcagtacgcgcagccgcctccacagcagcagc 359
>gb|AY104980.1| Zea mays PCO111857 mRNA sequence Length = 1651 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 337 tcggggacctccagtactggatggacgagaactac 371 |||| |||||||||||||||||||| || |||||| Sbjct: 379 tcggtgacctccagtactggatggatgaaaactac 413
>emb|AJ308589.1|HSA308589 Homo sapiens partial UBTF for upstream binding transcription factor, RNA polymerase I, promoter region and exon 1 Length = 2398 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgccccag 209 |||||| | |||||||||||||||||||||| Sbjct: 2145 gccgccacagcagcagcagccgccgccccag 2175
>emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete sequence Length = 214061 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgcc 205 |||||| |||||||||||||||||||| Sbjct: 19907 gccgccgccgcagcagcagccgccgcc 19933
>ref|NM_124872.2| Arabidopsis thaliana ATRBP45A; RNA binding AT5G54900 (ATRBP45A) mRNA, complete cds Length = 1413 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tggatcggggacctccagtactggatggacgagaactacatc 374 |||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 216 tggatcggagacttgcagcaatggatggacgagaactacatc 257
>ref|XM_476075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgc 204 |||||| ||||||||||||||||||| Sbjct: 155 gccgccgccgcagcagcagccgccgc 130
>gb|AE010448.1| Methanopyrus kandleri AV19 section 147 of 157 of the complete genome Length = 10556 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 ccaccgccgccgtcgcagccgc 84 |||||||||||||||||||||| Sbjct: 451 ccaccgccgccgtcgcagccgc 430
>ref|NM_184951.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1697 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccatgatgcagccaccgccgccgtcgcag 80 |||||||||||||| ||||||||| ||||| Sbjct: 41 gccatgatgcagccgccgccgccgccgcag 70
>ref|NM_197590.1| Oryza sativa (japonica cultivar-group) putative ubiquitin protein (OSJNBb0015I11.23), mRNA Length = 2359 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgcagc 87 ||||||||||||| |||||||||||| Sbjct: 201 gccaccgccgccgccgcagccgcagc 176
>ref|XM_469580.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 cagccaccgccgccgtcgcagccgcagccg 89 |||||||| || |||||||||||||||||| Sbjct: 235 cagccaccacctccgtcgcagccgcagccg 264
>ref|XM_472544.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2163 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgccccagg 210 |||| |||||||||||||||||||| |||| Sbjct: 149 cgccgccgcagcagcagccgccgccgcagg 178
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 60 cagccaccgccgccgtcgcagccgcagccg 89 |||||||| || |||||||||||||||||| Sbjct: 46448 cagccaccacctccgtcgcagccgcagccg 46419
>ref|XM_979761.1| PREDICTED: Mus musculus DAZ interacting protein 1 (Dzip1), mRNA Length = 5121 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccggg 91 ||||||||| |||||||||||||||| Sbjct: 823 ccgccgccgccgcagccgcagccggg 848
>ref|XM_994816.1| PREDICTED: Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), transcript variant 3 (Sfpq), mRNA Length = 4225 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 1088 gcagccgccgccgcaccagcagccgccgcc 1117
>ref|XM_981759.1| PREDICTED: Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), mRNA Length = 4075 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 938 gcagccgccgccgcaccagcagccgccgcc 967
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgccccagg 210 |||| |||||||||||||||||||| |||| Sbjct: 31755 cgccgccgcagcagcagccgccgccgcagg 31784
>ref|XM_862048.1| PREDICTED: Canis familiaris similar to BarH-like 2, transcript variant 2 (LOC611092), mRNA Length = 1194 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 ccccgcagcagcagccgccgcc 205 |||||||||||||||||||||| Sbjct: 323 ccccgcagcagcagccgccgcc 344
>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete sequence Length = 91084 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 60 cagccaccgccgccgtcgcagccgcagccg 89 |||||||| || |||||||||||||||||| Sbjct: 78533 cagccaccacctccgtcgcagccgcagccg 78504
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 caccgccgccgtcgcagccgcagccg 89 ||||||||||| |||||||||||||| Sbjct: 23432 caccgccgccgccgcagccgcagccg 23457
>gb|BC089305.1| Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated), mRNA (cDNA clone MGC:101933 IMAGE:30360144), complete cds Length = 3032 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 316 gcagccgccgccgcaccagcagccgccgcc 345
>gb|BC098211.1| Mus musculus DAZ interacting protein 1, mRNA (cDNA clone MGC:106777 IMAGE:6825425), complete cds Length = 4097 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccggg 91 ||||||||| |||||||||||||||| Sbjct: 449 ccgccgccgccgcagccgcagccggg 474
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 caccgccgccgtcgcagccgcagccg 89 ||||||||||| |||||||||||||| Sbjct: 159662 caccgccgccgccgcagccgcagccg 159687
>ref|NM_025943.2| Mus musculus DAZ interacting protein 1 (Dzip1), mRNA Length = 4476 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccggg 91 ||||||||| |||||||||||||||| Sbjct: 108 ccgccgccgccgcagccgcagccggg 133
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgc 201 ||||||||| |||||||||||||||| Sbjct: 22951 gcagccgccgccgcagcagcagccgc 22976 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 97826 ccgccgccgccgcagccgcagccg 97849
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgc 201 ||||||||| |||||||||||||||| Sbjct: 107579 gcagccgccgccgcagcagcagccgc 107604
>ref|NM_023603.2| Mus musculus splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) (Sfpq), mRNA Length = 3032 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 316 gcagccgccgccgcaccagcagccgccgcc 345
>dbj|AK141247.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330036N15 product:Weakly similar to zinc-finger protein DZIP1 (Fragment), full insert sequence Length = 4160 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccggg 91 ||||||||| |||||||||||||||| Sbjct: 377 ccgccgccgccgcagccgcagccggg 402
>gb|AY034062.1| Mus musculus PTB-associated splicing factor mRNA, complete cds Length = 2464 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 265 gcagccgccgccgcaccagcagccgccgcc 294
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagc 87 ||||||||||||| |||||||||||| Sbjct: 56617 gccaccgccgccgccgcagccgcagc 56642
>gb|AF324983.2|AF324983 Arabidopsis thaliana AT5g54900 (AT5g54900/MBG8_17) mRNA, complete cds Length = 1395 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tggatcggggacctccagtactggatggacgagaactacatc 374 |||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 216 tggatcggagacttgcagcaatggatggacgagaactacatc 257
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagc 87 ||||||||||||| |||||||||||| Sbjct: 20655165 gccaccgccgccgccgcagccgcagc 20655190 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 15168989 ccgcagcagcagccgccgccc 15169009 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 21425632 ccgcagcagcagccgccgcc 21425651 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 19866441 ccgcagcagcagccgccgcc 19866422 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 2363933 ccgccgccgccgcagccgcagccg 2363956 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 1068425 ccgccgccgccgcagccgcagccg 1068402
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgc 204 |||||| ||||||||||||||||||| Sbjct: 5308889 gccgccgccgcagcagcagccgccgc 5308864 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 178 agccgcccccgcagcagcagccgccgccc 206 ||||| ||| ||||||||||||||||||| Sbjct: 9868347 agccggcccagcagcagcagccgccgccc 9868319 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 178 agccgcccccgcagcagcagccgccgccc 206 ||||| ||| ||||||||||||||||||| Sbjct: 9859491 agccggcccagcagcagcagccgccgccc 9859463 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||| |||||| ||||||| Sbjct: 29543270 gccaccgccgccgccgcagcagcagccg 29543297 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 cccccgcagcagcagccgccgccc 206 |||| ||||||||||||||||||| Sbjct: 29436476 ccccagcagcagcagccgccgccc 29436499 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagc 87 |||||||||||||||||||| Sbjct: 25192042 gccgccgtcgcagccgcagc 25192061
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 gccatgatgcagccaccgccgccgtcgcag 80 |||||||||||||| ||||||||| ||||| Sbjct: 112804 gccatgatgcagccgccgccgccgccgcag 112775
>ref|XM_244043.3| PREDICTED: Rattus norvegicus similar to RP3-330M21.4 (LOC316229), mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 caccgccgccgtcgcagccgcagccg 89 ||||||||||| |||||||||||||| Sbjct: 102 caccgccgccgccgcagccgcagccg 127
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 333 tggatcggggacctccagtactggatggacgagaactacatc 374 |||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 54601 tggatcggagacttgcagcaatggatggacgagaactacatc 54642
>dbj|AK119985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-F11, full insert sequence Length = 1084 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccatgatgcagccaccgccgccgtcgcag 80 |||||||||||||| ||||||||| ||||| Sbjct: 29 gccatgatgcagccgccgccgccgccgcag 58
>dbj|AK107276.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-A05, full insert sequence Length = 947 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 cagccaccgccgccgtcgcagccgcagccg 89 |||||||| || |||||||||||||||||| Sbjct: 280 cagccaccacctccgtcgcagccgcagccg 309
>dbj|AK105042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B04, full insert sequence Length = 2090 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgcagc 87 ||||||||||||| |||||||||||| Sbjct: 203 gccaccgccgccgccgcagccgcagc 178
>dbj|AK101593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051E20, full insert sequence Length = 1710 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gccatgatgcagccaccgccgccgtcgcag 80 |||||||||||||| ||||||||| ||||| Sbjct: 133 gccatgatgcagccgccgccgccgccgcag 162
>dbj|AK065246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I23, full insert sequence Length = 2109 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgcagc 87 ||||||||||||| |||||||||||| Sbjct: 199 gccaccgccgccgccgcagccgcagc 174
>gb|AY109533.1| Zea mays CL775_1 mRNA sequence Length = 1689 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 342 gacctccagtactggatggacgagaactacatctacagctgcttcg 387 ||||| ||||||||||||||||| ||||| | |||||||||||| Sbjct: 422 gacctgcagtactggatggacgaaaactatcttcacagctgcttcg 467
>gb|AC154377.4| Mus musculus BAC clone RP23-63F23 from chromosome 14, complete sequence Length = 193561 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccggg 91 ||||||||| |||||||||||||||| Sbjct: 60237 ccgccgccgccgcagccgcagccggg 60262
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagc 87 ||||||||||||| |||||||||||| Sbjct: 20666437 gccaccgccgccgccgcagccgcagc 20666462 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 15177230 ccgcagcagcagccgccgccc 15177250 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 21436895 ccgcagcagcagccgccgcc 21436914 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 19877717 ccgcagcagcagccgccgcc 19877698 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 2363884 ccgccgccgccgcagccgcagccg 2363907 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 1068422 ccgccgccgccgcagccgcagccg 1068399
>emb|AL954730.15| Mouse DNA sequence from clone RP23-461C4 on chromosome 11, complete sequence Length = 193721 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 gcagcagcagccgccgccccag 209 |||||||||||||||||||||| Sbjct: 151312 gcagcagcagccgccgccccag 151291
>gb|BC080848.1| Mus musculus cDNA clone IMAGE:6813811, containing frame-shift errors Length = 3027 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 316 gcagccgccgccgcaccagcagccgccgcc 345
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete sequence Length = 209053 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgc 204 |||||| ||||||||||||||||||| Sbjct: 172679 gccgccgccgcagcagcagccgccgc 172704
>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete sequence Length = 193947 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcc 205 ||||||||| ||||| |||||||||||||| Sbjct: 74887 gcagccgccgccgcaccagcagccgccgcc 74916
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgc 204 |||||| ||||||||||||||||||| Sbjct: 45590 gccgccgccgcagcagcagccgccgc 45565
>ref|NM_012560.2| Rattus norvegicus forkhead box G1 (Foxg1), mRNA Length = 2811 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgccccaggcc 212 |||||||| ||||||||||| |||||||| |||| Sbjct: 642 gccgccccagcagcagcagcagccgcccccggcc 675
>gb|M87634.1|RATBF1A Rat BF-1 mRNA, complete cds Length = 2816 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgccccaggcc 212 |||||||| ||||||||||| |||||||| |||| Sbjct: 643 gccgccccagcagcagcagcagccgcccccggcc 676
>ref|NM_101037.2| Arabidopsis thaliana ATRBP45B; RNA binding AT1G11650 (ATRBP45B) transcript variant AT1G11650.2 mRNA, complete cds Length = 1561 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 |||||| || |||| || |||||||||||| | ||||| |||||||| ||||| Sbjct: 296 gacgagatccggactctttggatcggggacttacagtattggatggatgagaa 348
>ref|NM_179310.1| Arabidopsis thaliana ATRBP45B; RNA binding AT1G11650 (ATRBP45B) transcript variant AT1G11650.1 mRNA, complete cds Length = 1562 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 |||||| || |||| || |||||||||||| | ||||| |||||||| ||||| Sbjct: 296 gacgagatccggactctttggatcggggacttacagtattggatggatgagaa 348
>gb|AC151752.1| Ornithorhynchus anatinus chromosome UNK clone OABb-503A1, complete sequence Length = 132108 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||||||||||| || ||||||||||| Sbjct: 58156 gccgcccccgcagccgccgccgccgcccc 58184 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcagcagcagccgccgcccc 207 |||||||||||||||||||| Sbjct: 58216 gcagcagcagccgccgcccc 58235 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 cgcagccgcccccgcagcagcagc 198 |||||| ||||||||||||||||| Sbjct: 58191 cgcagcagcccccgcagcagcagc 58214
>ref|XM_550259.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1929 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 329 ccgcagcagcagccgccgccc 349
>ref|XM_464778.1| Oryza sativa (japonica cultivar-group), mRNA Length = 237 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 tgcagccaccgccgccgtcgc 78 ||||||||||||||||||||| Sbjct: 46 tgcagccaccgccgccgtcgc 66
>ref|NM_196673.1| Oryza sativa (japonica cultivar-group) putative soluble starch synthase II-1 (OSJNBb0016G17.2), mRNA Length = 3219 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 3034 ccgcagcagcagccgccgccc 3054
>ref|XM_513294.1| PREDICTED: Pan troglodytes similar to polyhomeotic 2-like isoform a; early development regulator 2-like; early development regulator 2 (homolog of polyhomeotic 2) (LOC456729), mRNA Length = 1698 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cagcagcagccgccgccccag 209 ||||||||||||||||||||| Sbjct: 985 cagcagcagccgccgccccag 1005
>gb|AC146338.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093C16, complete sequence Length = 206612 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 178 agccgcccccgcagcagcagccgccgccc 206 ||||| ||| ||||||||||||||||||| Sbjct: 98974 agccggcccagcagcagcagccgccgccc 98946 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 178 agccgcccccgcagcagcagccgccgccc 206 ||||| ||| ||||||||||||||||||| Sbjct: 90118 agccggcccagcagcagcagccgccgccc 90090
>gb|AY640308.1| Gallus gallus homeodomain transcription factor DLX6 (DLX6) mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgcccca 208 ||||||||| ||||||| || |||||||||||| Sbjct: 193 gcagccgccgccgcagccgccgccgccgcccca 225
>ref|XM_610950.2| PREDICTED: Bos taurus similar to receptor expression enhancing protein 2 (LOC532432), mRNA Length = 1622 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| || |||||||||||||||||||| Sbjct: 60 gcagcagcacccgcagcagcagccgccgc 32
>ref|NM_018951.3| Homo sapiens homeobox A10 (HOXA10), transcript variant 1, mRNA Length = 2648 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 432 gccgccgccccagcagcagccgccgcccc 460
>ref|NM_018693.2| Homo sapiens F-box protein 11 (FBXO11), transcript variant 2, mRNA Length = 2567 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 27 gcagcagcccccgcagcagccgccgccgc 55
>ref|NM_025133.3| Homo sapiens F-box protein 11 (FBXO11), transcript variant 1, mRNA Length = 3951 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 27 gcagcagcccccgcagcagccgccgccgc 55
>ref|NM_012167.1| Homo sapiens F-box protein 11 (FBXO11), transcript variant 3, mRNA Length = 2154 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 27 gcagcagcccccgcagcagccgccgccgc 55
>ref|NM_198040.1| Homo sapiens polyhomeotic-like 2 (Drosophila) (PHC2), transcript variant 1, mRNA Length = 3885 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cagcagcagccgccgccccag 209 ||||||||||||||||||||| Sbjct: 1126 cagcagcagccgccgccccag 1146
>ref|XM_987011.1| PREDICTED: Mus musculus hypothetical protein LOC671430 (LOC671430), mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 788 gcagcagcccccgcagcagccgccgccgc 760
>ref|XM_001004113.1| PREDICTED: Mus musculus F-box protein 11 (Fbxo11), mRNA Length = 4013 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 105 gcagcagcccccgcagcagccgccgccgc 133
>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence Length = 191971 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 177742 gccgccgccccagcagcagccgccgcccc 177714
>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the gene for a novel protein (FLJ35476), the gene for a novel protein similar to ABO family protein, two novel genes, the PHC2 gene for polyhomeotic-like 2 (Drosophila) and two CpG islands, complete sequence Length = 188665 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 cagcagcagccgccgccccag 209 ||||||||||||||||||||| Sbjct: 152988 cagcagcagccgccgccccag 152968
>ref|XM_503707.1| Yarrowia lipolytica CLIB122, YALI0E08844g predicted mRNA Length = 2250 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 catgatgcagccaccgccgcc 73 ||||||||||||||||||||| Sbjct: 171 catgatgcagccaccgccgcc 191
>ref|XM_778030.1| PREDICTED: Strongylocentrotus purpuratus similar to Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac-specific homeobox) (Homeobox protein CSX) (LOC577823), mRNA Length = 1035 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ccgccgtcgcagccgcagccg 89 ||||||||||||||||||||| Sbjct: 758 ccgccgtcgcagccgcagccg 778
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 cagcagccgccgccccaggcc 212 ||||||||||||||||||||| Sbjct: 3218339 cagcagccgccgccccaggcc 3218319
>emb|X58430.1|HSHOX18 Homo sapiens Hox1.8 gene for homeobox protein Length = 3510 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 902 gccgccgccccagcagcagccgccgcccc 930
>emb|AJ419231.1|HSA419231 Homo sapiens mRNA for polyhomeotic 2 (PHC2 gene) Length = 3870 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cagcagcagccgccgccccag 209 ||||||||||||||||||||| Sbjct: 1126 cagcagcagccgccgccccag 1146
>gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome 9, complete sequence Length = 211783 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cccgcagcagcagccgccgcc 205 ||||||||||||||||||||| Sbjct: 198229 cccgcagcagcagccgccgcc 198249
>gb|BT008494.1| Arabidopsis thaliana At1g11650 gene, complete cds Length = 1218 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 |||||| || |||| || |||||||||||| | ||||| |||||||| ||||| Sbjct: 175 gacgagatccggactctttggatcggggacttacagtattggatggatgagaa 227
>dbj|AB234881.1| Trifolium pratense mRNA for putative DNA binding protein, complete cds Length = 3067 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 ||||||||| | || ||||||||||| || | || ||||||||||||||||| Sbjct: 252 gacgaggtccgtactctctggatcggtgatttacaatactggatggacgagaa 304
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 22688 ccgcagcagcagccgccgccc 22708
>dbj|AK056429.1| Homo sapiens cDNA FLJ31867 fis, clone NT2RP7001856, highly similar to Mus musculus polyhomeotic (mPh2) mRNA Length = 2800 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cagcagcagccgccgccccag 209 ||||||||||||||||||||| Sbjct: 53 cagcagcagccgccgccccag 73
>gb|AY093201.1| Arabidopsis thaliana similar to gb|U90212 DNA binding protein ACBF from Nicotiana tabacum and contains 3 PF|00076 RNA recognition motif domains (At1g11650) mRNA, complete cds Length = 1511 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 |||||| || |||| || |||||||||||| | ||||| |||||||| ||||| Sbjct: 267 gacgagatccggactctttggatcggggacttacagtattggatggatgagaa 319
>gb|AC004080.2| Homo sapiens PAC clone RP1-170O19 from 7p15-p21, complete sequence Length = 129355 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 47275 gccgccgccccagcagcagccgccgcccc 47247
>gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromosome 7, complete sequence Length = 177652 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 109796 gccgccgccccagcagcagccgccgcccc 109768
>emb|BX933935.2| Gallus gallus finished cDNA, clone ChEST11m11 Length = 1585 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgcc 205 ||||||| ||||||||||||||||| Sbjct: 296 cgcccccccagcagcagccgccgcc 320
>emb|BX930733.2| Gallus gallus finished cDNA, clone ChEST377k2 Length = 586 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgcc 205 ||||||| ||||||||||||||||| Sbjct: 296 cgcccccccagcagcagccgccgcc 320
>ref|XM_624525.1| PREDICTED: Apis mellifera similar to Sp-like zinc finger protein (LOC552146), partial mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 59 gcagccaccgccgccgtcgcagccgcagc 87 |||||| ||||||||| |||||||||||| Sbjct: 1308 gcagccgccgccgccgccgcagccgcagc 1336
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 3500421 ccgcagcagcagccgccgccc 3500441 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 40482182 ccgccgccgccgcagccgcagccg 40482159 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 30724531 ccgccgccgccgcagccgcagccg 30724508 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||||||| ||||| |||| Sbjct: 30662994 gccaccgccgccgtcgccgccgccgccg 30663021 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 ccgcccccgcagcagcagccgccgcccc 207 ||||| ||||||||||||||||| |||| Sbjct: 27674624 ccgccgccgcagcagcagccgcctcccc 27674651 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 27229953 ccgccgccgccgcagccgcagccg 27229976 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 9180667 ccgccgccgccgcagccgcagccg 9180690 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cgccgccgtcgcagccgcag 86 |||||||||||||||||||| Sbjct: 4405591 cgccgccgtcgcagccgcag 4405610
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 77602 ccgcagcagcagccgccgccc 77622
>gb|AY827075.1| Homo sapiens F-box protein 11 (FBXO11) mRNA, complete cds Length = 2784 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 72 gcagcagcccccgcagcagccgccgccgc 100
>gb|AC079807.5| Homo sapiens BAC clone RP11-760G15 from 2, complete sequence Length = 156175 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 90539 gcagcagcccccgcagcagccgccgccgc 90511
>gb|AC154434.2| Mus musculus BAC clone RP24-185H5 from chromosome 9, complete sequence Length = 192358 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 cccgcagcagcagccgccgcc 205 ||||||||||||||||||||| Sbjct: 105223 cccgcagcagcagccgccgcc 105203
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 161167 gcagcagcccccgcagcagccgccgccgc 161195
>dbj|AK223592.1| Homo sapiens mRNA for F-box only protein 11 isoform 1 variant, clone: FCC130H05 Length = 2791 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 29 gcagcagcccccgcagcagccgccgccgc 57
>ref|NM_134406.1| Rattus norvegicus phosphofurin acidic cluster sorting protein 1 (Pacs1), mRNA Length = 4198 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 ccccgcagcagcagccgccgc 204 ||||||||||||||||||||| Sbjct: 183 ccccgcagcagcagccgccgc 203
>dbj|AB162033.1| Eriobotrya japonica EjLFY-1 mRNA for LEAFY protein, complete cds Length = 1383 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 cagccgcccccgcagcagcagccgc 201 ||||||||||||||||||| ||||| Sbjct: 154 cagccgcccccgcagcagctgccgc 130
>gb|AY086969.1| Arabidopsis thaliana clone 30022 mRNA, complete sequence Length = 1486 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 |||||| || |||| || |||||||||||| | ||||| |||||||| ||||| Sbjct: 241 gacgagatccggactctttggatcggggacttacagtattggatggatgagaa 293
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagcc 199 ||||||||||||||||||||| Sbjct: 4861843 gccgcccccgcagcagcagcc 4861863 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 gggcagccgccgcactggggcgcg 149 ||||||||||||| |||||||||| Sbjct: 4691596 gggcagccgccgccctggggcgcg 4691573 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cccgcagcagcagccgccgc 204 |||||||||||||||||||| Sbjct: 4367115 cccgcagcagcagccgccgc 4367096
>gb|BC043258.1| Homo sapiens, clone MGC:44383 IMAGE:5296581, mRNA, complete cds Length = 3960 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 36 gcagcagcccccgcagcagccgccgccgc 64
>gb|AF176706.1| Homo sapiens F-box protein FBX11 mRNA, partial cds Length = 666 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 15 gcagcagcccccgcagcagccgccgccgc 43
>gb|AC092567.4| Homo sapiens BAC clone CTD-2010B19 from 2, complete sequence Length = 163496 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cgcccccgcagcagcagccgccgcc 205 |||| |||||||||||||||||||| Sbjct: 22102 cgccgccgcagcagcagccgccgcc 22078
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 68489 ccgcagcagcagccgccgccc 68509
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cgcccccgcagcagcagccgccgcc 205 |||| |||||||||||||||||||| Sbjct: 65880 cgccgccgcagcagcagccgccgcc 65856
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tgcagccaccgccgccgtcgc 78 ||||||||||||||||||||| Sbjct: 84383 tgcagccaccgccgccgtcgc 84363
>emb|AJ297918.1|GGA297918 Gallus gallus partial SCD1 gene for stearoyl-CoA desaturase 1, promoter region and partial exon 1 Length = 497 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cccgcagcagcagccgccgcc 205 ||||||||||||||||||||| Sbjct: 416 cccgcagcagcagccgccgcc 436
>dbj|AK121314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113A13, full insert sequence Length = 3259 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cgcccccgcagcagcagccgccgcc 205 |||| |||||||||||||||||||| Sbjct: 42 cgccgccgcagcagcagccgccgcc 18
>dbj|AK120658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E21, full insert sequence Length = 1929 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 329 ccgcagcagcagccgccgccc 349
>dbj|AK101428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038H23, full insert sequence Length = 3284 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 181 cgcccccgcagcagcagccgccgcc 205 |||| |||||||||||||||||||| Sbjct: 40 cgccgccgcagcagcagccgccgcc 16
>gb|AF174599.1|AF174599 Homo sapiens F-box protein Fbx11 (FBX11) mRNA, partial cds Length = 591 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 27 gcagcagcccccgcagcagccgccgccgc 55
>dbj|AK062774.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-A06, full insert sequence Length = 849 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 412 ccgcagcagcagccgccgccc 432
>gb|AY109586.1| Zea mays CL860_-1 mRNA sequence Length = 1420 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 tggatggacgagaactacatctacagctgcttc 386 |||||||||||| ||||| ||||| |||||||| Sbjct: 236 tggatggacgaggactacctctacggctgcttc 268
>gb|AY551183.2| Eriobotrya japonica transcriptional factor leafy (lfy) gene, complete cds Length = 2602 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 cagccgcccccgcagcagcagccgc 201 ||||||||||||||||||| ||||| Sbjct: 127 cagccgcccccgcagcagctgccgc 103
>gb|AC007296.2|F25C20 Arabidopsis thaliana chromosome 1 BAC F25C20 sequence, complete sequence Length = 91566 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Minus Query: 315 gacgaggtcaggacgctctggatcggggacctccagtactggatggacgagaa 367 |||||| || |||| || |||||||||||| | ||||| |||||||| ||||| Sbjct: 76368 gacgagatccggactctttggatcggggacttacagtattggatggatgagaa 76316
>dbj|AP001007.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-687M24, complete sequence Length = 203840 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 cccgcagcagcagccgccgcc 205 ||||||||||||||||||||| Sbjct: 82413 cccgcagcagcagccgccgcc 82393
>gb|BC013971.2| Homo sapiens homeobox A10, transcript variant 1, mRNA (cDNA clone MGC:12859 IMAGE:4107013), complete cds Length = 2618 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 400 gccgccgccccagcagcagccgccgcccc 428
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgccc 206 ||||||||||||||||||||| Sbjct: 87181 ccgcagcagcagccgccgccc 87201
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cgccgcagggcgcgggagggc 129 ||||||||||||||||||||| Sbjct: 3111771 cgccgcagggcgcgggagggc 3111751
>gb|AF076184.1|AF076184 Rattus norvegicus cytosolic sorting protein PACS-1b (PACS-1) mRNA, complete cds Length = 2480 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 ccccgcagcagcagccgccgc 204 ||||||||||||||||||||| Sbjct: 183 ccccgcagcagcagccgccgc 203
>gb|AF076183.1|AF076183 Rattus norvegicus cytosolic sorting protein PACS-1a (PACS-1) mRNA, complete cds Length = 4198 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 ccccgcagcagcagccgccgc 204 ||||||||||||||||||||| Sbjct: 183 ccccgcagcagcagccgccgc 203
>gb|AC145963.5| Gallus gallus BAC clone CH261-20A24 from chromosome unknown, complete sequence Length = 185318 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 176 gcagccgcccccgcagcagcagccgccgcccca 208 ||||||||| ||||||| || |||||||||||| Sbjct: 124220 gcagccgccgccgcagccgccgccgccgcccca 124188
>gb|AF040714.1|AF040714 Homo sapiens homeobox protein A10 (HOXA10) gene, complete cds Length = 2691 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 gccgcccccgcagcagcagccgccgcccc 207 |||||| || ||||||||||||||||||| Sbjct: 670 gccgccgccccagcagcagccgccgcccc 698
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 catgatgcagccaccgccgcc 73 ||||||||||||||||||||| Sbjct: 1040666 catgatgcagccaccgccgcc 1040646
>gb|U32943.1|SAU32943 Schistocerca americana Antennapedia homeotic protein (Antp) mRNA, complete cds Length = 3068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagca 196 ||||||||||||||||||||| Sbjct: 911 gcagccgcccccgcagcagca 931
>gb|AC154673.2| Mus musculus BAC clone RP24-298M20 from chromosome 17, complete sequence Length = 157621 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagccgccgc 204 ||||| |||||||||||||| |||||||| Sbjct: 39494 gcagcagcccccgcagcagccgccgccgc 39522
>ref|NM_119012.1| Arabidopsis thaliana ammonium transporter AT4G28700 mRNA, complete cds Length = 1515 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 cgcccccgcagcagcagccgccgc 204 |||| ||||||||||||||||||| Sbjct: 63 cgccaccgcagcagcagccgccgc 86
>ref|NM_123534.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G41690 mRNA, complete cds Length = 1863 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 gggttatggctttgtcgagtttgc 472 ||||||||||||||| |||||||| Sbjct: 852 gggttatggctttgttgagtttgc 875
>ref|XM_476034.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 672 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 cccccgcagcagcagccgccgccc 206 |||| ||||||||||||||||||| Sbjct: 46 ccccagcagcagcagccgccgccc 69
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 agcagccgccgccccaggcc 212 |||||||||||||||||||| Sbjct: 92919 agcagccgccgccccaggcc 92938
>ref|XM_550422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cgccgccgtcgcagccgcag 86 |||||||||||||||||||| Sbjct: 449 cgccgccgtcgcagccgcag 430
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 183 cccccgcagcagcagccgccgccc 206 |||| ||||||||||||||||||| Sbjct: 84501 ccccagcagcagcagccgccgccc 84524
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccgccgtcgcagccgcagc 87 |||||||||||||||||||| Sbjct: 54883 gccgccgtcgcagccgcagc 54902
>ref|XM_529952.1| PREDICTED: Pan troglodytes LOC455391 (LOC455391), mRNA Length = 836 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gcagccgcccccgcagcagc 195 |||||||||||||||||||| Sbjct: 482 gcagccgcccccgcagcagc 463
>ref|XM_483438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cgcagcagcagccgccgccc 206 |||||||||||||||||||| Sbjct: 649 cgcagcagcagccgccgccc 630
>ref|XM_480148.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1210 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 |||||||||| ||||||||||||| Sbjct: 238 ccgccgccgtagcagccgcagccg 215
>ref|XM_521895.1| PREDICTED: Pan troglodytes similar to Homeobox protein aristaless-like 4 (LOC466496), mRNA Length = 5334 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 cagccaccgccgccgtcgcagccgcagc 87 ||||| ||||||||| |||||||||||| Sbjct: 2890 cagccgccgccgccgccgcagccgcagc 2917
>ref|XM_475698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1233 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gccgccgtcgcagccgcagc 87 |||||||||||||||||||| Sbjct: 78 gccgccgtcgcagccgcagc 59
>ref|XM_474217.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 gcagcagcagccgccgcccc 207 |||||||||||||||||||| Sbjct: 142 gcagcagcagccgccgcccc 161
>ref|XM_473886.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgatcccgccgccgatgccg 167 |||||||||||||||||||| Sbjct: 644 cgatcccgccgccgatgccg 663
>ref|NM_194613.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0023I19.11), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 31 ccgccgccgccgcagccgcagccg 54
>ref|XM_467013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2113 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cgccgccgtcgcagccgcag 86 |||||||||||||||||||| Sbjct: 745 cgccgccgtcgcagccgcag 764
>gb|DQ215462.1| Taeniopygia guttata clone 0061P0024C04 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1191 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 5 ccgccgccgtcgcagccgca 24
>gb|DQ215461.1| Taeniopygia guttata clone 0058P0034F04 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 16 ccgccgccgtcgcagccgca 35
>gb|DQ215459.1| Taeniopygia guttata clone 0058P0020B05 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 16 ccgccgccgtcgcagccgca 35
>gb|DQ215456.1| Taeniopygia guttata clone 0061P0021G10 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1201 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 18 ccgccgccgtcgcagccgca 37
>gb|DQ215455.1| Taeniopygia guttata clone 0058P0034C03 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1222 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 36 ccgccgccgtcgcagccgca 55
>gb|DQ215454.1| Taeniopygia guttata clone 0058P0027D01 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1199 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 7 ccgccgccgtcgcagccgca 26
>gb|DQ215453.1| Taeniopygia guttata clone 0058P0032E04 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1229 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 36 ccgccgccgtcgcagccgca 55
>gb|DQ215444.1| Taeniopygia guttata clone 0058P0014H05 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1198 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 7 ccgccgccgtcgcagccgca 26
>gb|DQ215442.1| Taeniopygia guttata clone 0058P0059H12 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1172 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 17 ccgccgccgtcgcagccgca 36
>gb|DQ215440.1| Taeniopygia guttata clone 0058P0044G10 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1207 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 19 ccgccgccgtcgcagccgca 38
>gb|DQ215439.1| Taeniopygia guttata clone 0058P0030F12 phosphatidylethanolamine-binding protein (PEBP)-like mRNA, complete sequence Length = 1230 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgca 85 |||||||||||||||||||| Sbjct: 24 ccgccgccgtcgcagccgca 43
>ref|XM_466448.1| Oryza sativa (japonica cultivar-group), mRNA Length = 615 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 236 ccgcagcagcagccgccgcc 217
>ref|NM_197435.1| Oryza sativa (japonica cultivar-group) putative phospholipase (OSJNBa0096G08.23), mRNA Length = 3512 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 97 ccgcagcagcagccgccgcc 116
>ref|NM_197709.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0010C11.4), mRNA Length = 1358 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 1267 ccgcagcagcagccgccgcc 1286
>ref|NM_191915.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 501 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 220 ccgccgccgccgcagccgcagccg 243
>ref|NM_191986.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 ccgcccccgcagcagcagccgccgcccc 207 ||||| ||||||||||||||||| |||| Sbjct: 97 ccgccgccgcagcagcagccgcctcccc 70
>ref|XM_516326.1| PREDICTED: Pan troglodytes similar to CG6720-PA (LOC460226), mRNA Length = 592 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 177 cagccgcccccgcagcagcagccgccgc 204 ||||||| ||||||||||||||||||| Sbjct: 248 cagccgcagccgcagcagcagccgccgc 275
>gb|BT017079.1| Zea mays clone EL01N0360A10.c mRNA sequence Length = 763 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 46 ccgccgccgccgcagccgcagccg 69
>ref|NM_187740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||||||| ||||| |||| Sbjct: 118 gccaccgccgccgtcgctgccgctgccg 91
>ref|XM_478917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 171 tacgcgcagccgcccccgcagcagcagc 198 |||||||||||||| || |||||||||| Sbjct: 224 tacgcgcagccgccgccccagcagcagc 251
>ref|XM_478813.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||| ||| |||||||||| Sbjct: 417 gccaccgccgccgccgcggccgcagccg 390
>ref|NM_186618.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ccaccgccgccgtcgcagcc 82 |||||||||||||||||||| Sbjct: 131 ccaccgccgccgtcgcagcc 112
>ref|NM_153092.2| Mus musculus nucleoporin like 2 (Nupl2), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagcc 199 ||||||||| |||||||||||||| Sbjct: 211 gcagccgccaccgcagcagcagcc 234
>gb|BC054379.1| Mus musculus progressive ankylosis, mRNA (cDNA clone MGC:62589 IMAGE:6390764), complete cds Length = 3468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 agcagccgccgccccaggcc 212 |||||||||||||||||||| Sbjct: 113 agcagccgccgccccaggcc 132
>gb|AY487897.1| Rattus norvegicus huntingtin (Hdh) mRNA, partial cds Length = 534 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 gcagcagcagccgccgccccaggc 211 |||||||||||||||||| ||||| Sbjct: 126 gcagcagcagccgccgccgcaggc 149
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 gcgcgatcccgccgccgatgccgc 168 ||||||| |||||||||||||||| Sbjct: 1102305 gcgcgatgccgccgccgatgccgc 1102282
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 ccgcagcagcagccgccgcc 205 |||||||||||||||||||| Sbjct: 127479 ccgcagcagcagccgccgcc 127460
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 74335 ccgccgccgccgcagccgcagccg 74312
>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence Length = 184672 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagcagcc 199 ||||||||| |||||||||||||| Sbjct: 93452 gcagccgccaccgcagcagcagcc 93475
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gccgccgcagggcgcgggag 126 |||||||||||||||||||| Sbjct: 101830 gccgccgcagggcgcgggag 101849
>gb|AY099515.2| Danio rerio splicing factor 3b subunit 4 (sf3b4) mRNA, complete cds Length = 1250 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 447 cagggttatggctttgtcgagttt 470 ||||||||||||||||| |||||| Sbjct: 179 cagggttatggctttgtggagttt 202
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||| |||||||||||||| Sbjct: 117149 ccgccgccgccgcagccgcagccg 117126
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 gccaccgccgccgtcgcagccgcagccg 89 ||||||||||||| |||||| ||||||| Sbjct: 27772 gccaccgccgccgccgcagcagcagccg 27799
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||||||| |||||||||| Sbjct: 121746 ccgccgccgtcgccgccgcagccg 121723
>gb|AC010707.17| Drosophila melanogaster clone BACR06P10, complete sequence Length = 176969 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ccgccgccgtcgcagccgcagccg 89 ||||||||||||| |||||||||| Sbjct: 7148 ccgccgccgtcgccgccgcagccg 7125
>ref|XM_428642.1| PREDICTED: Gallus gallus similar to Glutamate [NMDA] receptor subunit epsilon 3 precursor (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) (LOC431090), partial mRNA Length = 1010 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cgccgcagggcgcgggaggg 128 |||||||||||||||||||| Sbjct: 823 cgccgcagggcgcgggaggg 842
>ref|XM_416642.1| PREDICTED: Gallus gallus similar to hypothetical protein DKFZp761H079 isoform 1 (LOC418431), mRNA Length = 1490 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcagccgcccccgcagcagc 195 |||||||||||||||||||| Sbjct: 36 gcagccgcccccgcagcagc 55 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,760,081 Number of Sequences: 3902068 Number of extensions: 3760081 Number of successful extensions: 95697 Number of sequences better than 10.0: 439 Number of HSP's better than 10.0 without gapping: 470 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90262 Number of HSP's gapped (non-prelim): 5395 length of query: 555 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 532 effective length of database: 17,143,297,704 effective search space: 9120234378528 effective search space used: 9120234378528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
