ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart33c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109032.1| Zea mays PCO128696 mRNA sequence 58 3e-05
2gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
3ref|XM_475802.1| Oryza sativa (japonica cultivar-group), predic... 46 0.11
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
5dbj|AK070127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
6gb|AY105689.1| Zea mays PCO080397 mRNA sequence 46 0.11
7gb|BT018409.1| Zea mays clone EL01N0326F07.d mRNA sequence 44 0.44
8gb|AY912222.1| Phalaenopsis cornu-cervi internal transcribed spa... 44 0.44
9gb|AF537024.1| Phalaenopsis borneensis internal transcribed spac... 44 0.44
10gb|AF537011.1| Phalaenopsis pantherina internal transcribed spac... 44 0.44
11gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.7
12ref|XM_475584.1| Oryza sativa (japonica cultivar-group), predic... 42 1.7
13gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
14gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 1.7
15gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome... 42 1.7
16emb|AL031178.1|HS341E18 Human DNA sequence from clone RP3-341E18... 42 1.7
17gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.7
18gb|AF208543.1|AF208543 Lycopersicon esculentum hexokinase (Hxk2)... 42 1.7
19gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, comp... 42 1.7
20gb|AE005101.1| Halobacterium sp. NRC-1 section 132 of 170 of the... 42 1.7
21dbj|AK103601.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
22emb|AJ519534.1|B16519534 Bacteriophage 16-3 proviral immXu gene ... 42 1.7
23gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
24ref|XM_508208.1| PREDICTED: Pan troglodytes similar to transport... 40 6.9
25ref|XM_469240.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
26gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, co... 40 6.9
27gb|BC017280.2| Homo sapiens patatin-like phospholipase domain co... 40 6.9
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.9
29gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genom... 40 6.9
30emb|CR701146.2|CNS0G3YE Tetraodon nigroviridis full-length cDNA 40 6.9
31emb|CR699709.2|CNS0G2UH Tetraodon nigroviridis full-length cDNA 40 6.9
32emb|CR698962.2|CNS0G29Q Tetraodon nigroviridis full-length cDNA 40 6.9
33emb|CR697891.2|CNS0G1FZ Tetraodon nigroviridis full-length cDNA 40 6.9
34emb|CR696738.2|CNS0G0JY Tetraodon nigroviridis full-length cDNA 40 6.9
35emb|CR691156.2|CNS0FW8W Tetraodon nigroviridis full-length cDNA 40 6.9
36emb|CR685799.2|CNS0FS43 Tetraodon nigroviridis full-length cDNA 40 6.9
37emb|CR683242.2|CNS0FQ52 Tetraodon nigroviridis full-length cDNA 40 6.9
38emb|CR681556.2|CNS0FOU8 Tetraodon nigroviridis full-length cDNA 40 6.9
39ref|XM_503688.1| Yarrowia lipolytica CLIB122, YALI0E08206g predi... 40 6.9
40emb|AL357146.10| Human DNA sequence from clone RP11-478J9 on chr... 40 6.9
41emb|AL022341.6|HS349E10 Human DNA sequence from clone LA16c-349E... 40 6.9
42emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on ... 40 6.9
43emb|X56789.1|HSMRNALO H.sapiens mRNA for unknown liver orphan 40 6.9
44emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.9
45emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 40 6.9
46gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8 40 6.9
47gb|AF078727.2| Rangiferine herpesvirus 1 strain Salla 82 glycopr... 40 6.9
48dbj|AB217554.1| Gunnarella begaudii genes for ITS1, 5.8S rRNA, I... 40 6.9
49dbj|AB217553.1| Grosourdya callifera genes for ITS1, 5.8S rRNA, ... 40 6.9
50dbj|AB217551.1| Drymoanthus minimus genes for ITS1, 5.8S rRNA, I... 40 6.9
51gb|AC023078.9| Homo sapiens chromosome 11, clone RP11-583F24, co... 40 6.9
52gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genom... 40 6.9
53dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
54dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
55dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
56gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene... 40 6.9
57gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, com... 40 6.9
58dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.9
59dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
60dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
61dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
62dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 6.9
63dbj|AP006621.1| Homo sapiens genomic DNA, chromosome 11, clone:C... 40 6.9
64ref|XM_316167.2| Anopheles gambiae str. PEST ENSANGP00000020328 ... 40 6.9
65dbj|AK108598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
66emb|AJ278476.1|HSA278476 Homo sapiens partial mRNA for transport... 40 6.9
67emb|AJ278475.1|HSA278475 Homo sapiens partial mRNA for transport... 40 6.9
68dbj|AK059045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
69emb|BX511203.3| Rattus norvegicus chromosome 1 clone RN-79C10, c... 40 6.9
70gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.9
71gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.9
72emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.9
73ref|NM_020376.2| Homo sapiens patatin-like phospholipase domain ... 40 6.9
74emb|AL672290.16| Mouse DNA sequence from clone RP23-471M13 on ch... 40 6.9 
>gb|AY109032.1| Zea mays PCO128696 mRNA sequence
          Length = 1033

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 308 aatgttggggcgagcctggtgaagcaagtggctgatgctac 348
           |||||||||||||  |||||||||||||| |||||||||||
Sbjct: 447 aatgttggggcgaatctggtgaagcaagttgctgatgctac 487



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 230 gcccgcgccgccattctgcagggc 253
           |||||||||||||| |||||||||
Sbjct: 279 gcccgcgccgccatgctgcagggc 302
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>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 308   aatgttggggcgagcctggtgaagcaagtggctgatgctacta 350
             |||||||| || | ||||||||||||||| ||||| |||||||
Sbjct: 18007 aatgttggtgcaaacctggtgaagcaagttgctgaagctacta 17965



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 308   aatgttggggcgagcctggtgaagcaagtggctgatgctacta 350
             |||||||| || | ||||||||||||||| ||||| |||||||
Sbjct: 13904 aatgttggtgcaaacctggtgaagcaagttgctgaagctacta 13862



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    cgccgccatgtaccgggcggcggc 90
             |||| |||||||||||||||||||
Sbjct: 14462 cgccaccatgtaccgggcggcggc 14439
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>ref|XM_475802.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2040

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 308 aatgttggggcgagcctggtgaagcaagtggctgatgctacta 350
           |||||||| || | ||||||||||||||| ||||| |||||||
Sbjct: 550 aatgttggtgcaaacctggtgaagcaagttgctgaagctacta 592



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 67  cgccgccatgtaccgggcggcggc 90
           |||| |||||||||||||||||||
Sbjct: 136 cgccaccatgtaccgggcggcggc 159
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 308      aatgttggggcgagcctggtgaagcaagtggctgatgctacta 350
                |||||||| || | ||||||||||||||| ||||| |||||||
Sbjct: 26637010 aatgttggtgcaaacctggtgaagcaagttgctgaagctacta 26636968



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 308      aatgttggggcgagcctggtgaagcaagtggctgatgctacta 350
                |||||||| || | ||||||||||||||| ||||| |||||||
Sbjct: 26632907 aatgttggtgcaaacctggtgaagcaagttgctgaagctacta 26632865



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 82      ggcggcggccgccgccgcgatggct 106
               |||||| ||||||||||||||||||
Sbjct: 2325958 ggcggccgccgccgccgcgatggct 2325982



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 67       cgccgccatgtaccgggcggcggc 90
                |||| |||||||||||||||||||
Sbjct: 26633465 cgccaccatgtaccgggcggcggc 26633442



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      ggcggcggccgccgccgcgatggc 105
               ||||||||||||||||||| ||||
Sbjct: 2325970 ggcggcggccgccgccgcggtggc 2325947
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>dbj|AK070127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045O03, full
           insert sequence
          Length = 2139

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 308 aatgttggggcgagcctggtgaagcaagtggctgatgctacta 350
           |||||||| || | ||||||||||||||| ||||| |||||||
Sbjct: 373 aatgttggtgcaaacctggtgaagcaagttgctgaagctacta 415



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 67 cgccgccatgtaccgggcggcggc 90
          |||| |||||||||||||||||||
Sbjct: 54 cgccaccatgtaccgggcggcggc 77
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>gb|AY105689.1| Zea mays PCO080397 mRNA sequence
          Length = 967

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 48 acccacccccacacccacgcgcc 70
          |||||||||||||||||||||||
Sbjct: 76 acccacccccacacccacgcgcc 98
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>gb|BT018409.1| Zea mays clone EL01N0326F07.d mRNA sequence
          Length = 1730

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 323 ctggtgaagcaagtggctgatgctac 348
           |||||||||||||| |||||||||||
Sbjct: 53  ctggtgaagcaagttgctgatgctac 78
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>gb|AY912222.1| Phalaenopsis cornu-cervi internal transcribed spacer 1, 5.8S
          ribosomal RNA gene, and internal transcribed spacer 2,
          complete sequence
          Length = 667

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 78 accgggcggcggccgccgccgc 99
          ||||||||||||||||||||||
Sbjct: 40 accgggcggcggccgccgccgc 61
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>gb|AF537024.1| Phalaenopsis borneensis internal transcribed spacer 1, 5.8S
          ribosomal RNA gene, and internal transcribed spacer 2,
          complete sequence
          Length = 673

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 78 accgggcggcggccgccgccgc 99
          ||||||||||||||||||||||
Sbjct: 44 accgggcggcggccgccgccgc 65
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>gb|AF537011.1| Phalaenopsis pantherina internal transcribed spacer 1, 5.8S
          ribosomal RNA gene, and internal transcribed spacer 2,
          complete sequence
          Length = 667

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 78 accgggcggcggccgccgccgc 99
          ||||||||||||||||||||||
Sbjct: 42 accgggcggcggccgccgccgc 63
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 85      ggcggccgccgccgcgatggc 105
               |||||||||||||||||||||
Sbjct: 1490178 ggcggccgccgccgcgatggc 1490198



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 82      ggcggcggccgccgccgcgatggc 105
               |||||||||||| |||||||||||
Sbjct: 2507918 ggcggcggccgctgccgcgatggc 2507941
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>ref|XM_475584.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2607

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggcggcggccgccgccgcgatggct 106
           |||||| ||||||||||||||||||
Sbjct: 207 ggcggccgccgccgccgcgatggct 183



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  ggcggcggccgccgccgcgatggc 105
           ||||||||||||||||||| ||||
Sbjct: 195 ggcggcggccgccgccgcggtggc 218
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>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04,
            complete sequence
          Length = 133271

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 82   ggcggcggccgccgccgcgatggct 106
            |||||| ||||||||||||||||||
Sbjct: 1558 ggcggccgccgccgccgcgatggct 1582



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 82   ggcggcggccgccgccgcgatggc 105
            ||||||||||||||||||| ||||
Sbjct: 1570 ggcggcggccgccgccgcggtggc 1547
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 117     cttcttcctcggtggtgagga 137
               |||||||||||||||||||||
Sbjct: 2531507 cttcttcctcggtggtgagga 2531527
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>gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome 8, complete sequence
          Length = 215638

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 469    gaagtgcagacttcttcccattttt 493
              ||||||||||| |||||||||||||
Sbjct: 133296 gaagtgcagacatcttcccattttt 133272
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>emb|AL031178.1|HS341E18 Human DNA sequence from clone RP3-341E18 on chromosome 6p11.2-12.3
             Contains the KIAA0936 gene for a MAK-related kinase, a
             novel gene for NY-REN-57 antigen and CpG islands, complete
             sequence
          Length = 92558

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    cccacccccacacccacgcgc 69
             |||||||||||||||||||||
Sbjct: 12804 cccacccccacacccacgcgc 12784
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 81      gggcggcggccgccgccgcga 101
               |||||||||||||||||||||
Sbjct: 1156700 gggcggcggccgccgccgcga 1156680
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>gb|AF208543.1|AF208543 Lycopersicon esculentum hexokinase (Hxk2) mRNA, complete cds
          Length = 1770

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 327 tgaagcaagtggctgatgcta 347
           |||||||||||||||||||||
Sbjct: 301 tgaagcaagtggctgatgcta 321
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>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence
          Length = 245367

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 458    gaaataaaccagaagtgcaga 478
              |||||||||||||||||||||
Sbjct: 147428 gaaataaaccagaagtgcaga 147408
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>gb|AE005101.1| Halobacterium sp. NRC-1 section 132 of 170 of the complete genome
          Length = 12730

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 84   cggcggccgccgccgcgatgg 104
            |||||||||||||||||||||
Sbjct: 1578 cggcggccgccgccgcgatgg 1558
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>dbj|AK103601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133F19, full
           insert sequence
          Length = 2987

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 82  ggcggcggccgccgccgcgatggct 106
           |||||| ||||||||||||||||||
Sbjct: 427 ggcggccgccgccgccgcgatggct 403



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  ggcggcggccgccgccgcgatggc 105
           ||||||||||||||||||| ||||
Sbjct: 415 ggcggcggccgccgccgcggtggc 438
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>emb|AJ519534.1|B16519534 Bacteriophage 16-3 proviral immXu gene for pXu and immXl gene for pXl
          Length = 6161

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 114  ggtcttcttcctcggtggtga 134
            |||||||||||||||||||||
Sbjct: 1487 ggtcttcttcctcggtggtga 1507
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>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03,
             complete sequence
          Length = 107870

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 82    ggcggcggccgccgccgcgatggct 106
             |||||| ||||||||||||||||||
Sbjct: 53873 ggcggccgccgccgccgcgatggct 53897



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ggcggcggccgccgccgcgatggc 105
             ||||||||||||||||||| ||||
Sbjct: 53885 ggcggcggccgccgccgcggtggc 53862
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>ref|XM_508208.1| PREDICTED: Pan troglodytes similar to transport-secretion protein
           2.2 (TTS-2.2) (LOC450937), mRNA
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cggcggccgccgccgcgatg 103
           ||||||||||||||||||||
Sbjct: 233 cggcggccgccgccgcgatg 252
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>ref|XM_469240.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2271

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 65   cgcgccgccatgtaccgggcggcg 88
            ||||||||||||| ||||||||||
Sbjct: 1639 cgcgccgccatgttccgggcggcg 1662
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>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence
          Length = 355714

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     gggcggcggccgccgccgcg 100
              ||||||||||||||||||||
Sbjct: 184981 gggcggcggccgccgccgcg 185000
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>gb|BC017280.2| Homo sapiens patatin-like phospholipase domain containing 2, mRNA
           (cDNA clone MGC:29650 IMAGE:4875483), complete cds
          Length = 2113

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cggcggccgccgccgcgatg 103
           ||||||||||||||||||||
Sbjct: 186 cggcggccgccgccgcgatg 205
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 65       cgcgccgccatgtaccgggcggcg 88
                ||||||||||||| ||||||||||
Sbjct: 26287076 cgcgccgccatgttccgggcggcg 26287099
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>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete
              sequence
          Length = 134728

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 65     cgcgccgccatgtaccgggcggcg 88
              ||||||||||||| ||||||||||
Sbjct: 103564 cgcgccgccatgttccgggcggcg 103541
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>emb|CR701146.2|CNS0G3YE Tetraodon nigroviridis full-length cDNA
          Length = 1184

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 428 tcccatttttgctgaggatg 409
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>emb|CR699709.2|CNS0G2UH Tetraodon nigroviridis full-length cDNA
          Length = 1018

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 331 tcccatttttgctgaggatg 312
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>emb|CR698962.2|CNS0G29Q Tetraodon nigroviridis full-length cDNA
          Length = 1040

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 352 tcccatttttgctgaggatg 333
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>emb|CR697891.2|CNS0G1FZ Tetraodon nigroviridis full-length cDNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 358 tcccatttttgctgaggatg 339
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>emb|CR696738.2|CNS0G0JY Tetraodon nigroviridis full-length cDNA
          Length = 1063

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 396 tcccatttttgctgaggatg 377
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>emb|CR691156.2|CNS0FW8W Tetraodon nigroviridis full-length cDNA
          Length = 1028

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 366 tcccatttttgctgaggatg 347
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>emb|CR685799.2|CNS0FS43 Tetraodon nigroviridis full-length cDNA
          Length = 1033

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 345 tcccatttttgctgaggatg 326
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>emb|CR683242.2|CNS0FQ52 Tetraodon nigroviridis full-length cDNA
          Length = 1034

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 343 tcccatttttgctgaggatg 324
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>emb|CR681556.2|CNS0FOU8 Tetraodon nigroviridis full-length cDNA
          Length = 1220

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 484 tcccatttttgctgaggatg 503
           ||||||||||||||||||||
Sbjct: 438 tcccatttttgctgaggatg 419
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>ref|XM_503688.1| Yarrowia lipolytica CLIB122, YALI0E08206g predicted mRNA
          Length = 2517

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gtcttcttcctcggtggtga 134
           ||||||||||||||||||||
Sbjct: 864 gtcttcttcctcggtggtga 845
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>emb|AL357146.10| Human DNA sequence from clone RP11-478J9 on chromosome 6, complete
             sequence
          Length = 82494

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 456   ctgaaataaaccagaagtgcagac 479
             ||||||||||||| ||||||||||
Sbjct: 16254 ctgaaataaaccataagtgcagac 16231
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>emb|AL022341.6|HS349E10 Human DNA sequence from clone LA16c-349E10 on chromosome 16 Contains
             (part of) three novel genes, ESTs, STSs, GSSs and four CpG
             islands, complete sequence
          Length = 20539

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   cggcttcgaagcccgcgccg 239
             ||||||||||||||||||||
Sbjct: 12908 cggcttcgaagcccgcgccg 12889
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>emb|AL023581.1|HS45I4 Human DNA sequence from clone RP1-45I4 on chromosome 6q24.1-24.3
             Contains part of a novel gene (FLJ32928), two novel genes,
             and the 5' end of the gene for androgen induced protein
             (AIG-1, CGI-103) (includes FLJ10485). Contains a CpG
             island, complete sequence
          Length = 137947

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 463   aaaccagaagtgcagacttcttcc 486
             |||||||||||| |||||||||||
Sbjct: 97447 aaaccagaagtgtagacttcttcc 97424
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>emb|X56789.1|HSMRNALO H.sapiens mRNA for unknown liver orphan
          Length = 1787

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   cggcggccgccgccgcgatg 103
            ||||||||||||||||||||
Sbjct: 1737 cggcggccgccgccgcgatg 1718
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     ggcggcggccgccgccgcgatggc 105
              ||||||||||||||||||| ||||
Sbjct: 246773 ggcggcggccgccgccgcggtggc 246750
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    ggcggcggccgccgccgcgatggc 105
             ||||||||||||||||||| ||||
Sbjct: 15831 ggcggcggccgccgccgcggtggc 15808
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>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8
          Length = 256073

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    cggcttcgaagcccgcgccg 239
              ||||||||||||||||||||
Sbjct: 121396 cggcttcgaagcccgcgccg 121377
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>gb|AF078727.2| Rangiferine herpesvirus 1 strain Salla 82 glycoprotein B gene,
            complete cds
          Length = 3065

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   cgggcggcggccgccgccgc 99
            ||||||||||||||||||||
Sbjct: 3024 cgggcggcggccgccgccgc 3005
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>dbj|AB217554.1| Gunnarella begaudii genes for ITS1, 5.8S rRNA, ITS2,
           specimen_voucher:TBG125182
          Length = 650

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ggcggcggccgccgccgcga 101
           ||||||||||||||||||||
Sbjct: 49  ggcggcggccgccgccgcga 68
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>dbj|AB217553.1| Grosourdya callifera genes for ITS1, 5.8S rRNA, ITS2,
           specimen_voucher:TBG145840
          Length = 648

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ggcggcggccgccgccgcga 101
           ||||||||||||||||||||
Sbjct: 49  ggcggcggccgccgccgcga 68
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>dbj|AB217551.1| Drymoanthus minimus genes for ITS1, 5.8S rRNA, ITS2,
           specimen_voucher:TBG125168
          Length = 656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ggcggcggccgccgccgcga 101
           ||||||||||||||||||||
Sbjct: 49  ggcggcggccgccgccgcga 68
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>gb|AC023078.9| Homo sapiens chromosome 11, clone RP11-583F24, complete sequence
          Length = 163718

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 487    catttttgctgaggatgcagatgg 510
              ||||| ||||||||||||||||||
Sbjct: 100371 catttctgctgaggatgcagatgg 100394
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>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete
              sequence
          Length = 122939

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     cgcgccgccatgtaccgggcggcg 88
              ||||||||||||| ||||||||||
Sbjct: 116535 cgcgccgccatgttccgggcggcg 116558
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 176      cggcgccgctgggcgcgccg 195
                ||||||||||||||||||||
Sbjct: 27501097 cggcgccgctgggcgcgccg 27501116
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 65       cgcgccgccatgtaccgggcggcg 88
                ||||||||||||| ||||||||||
Sbjct: 26378385 cgcgccgccatgttccgggcggcg 26378408
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       gcggccgccgccgcgatggc 105
                ||||||||||||||||||||
Sbjct: 25221873 gcggccgccgccgcgatggc 25221892
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>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   cgctcgcgcgcggcggggtc 160
             ||||||||||||||||||||
Sbjct: 76525 cgctcgcgcgcggcggggtc 76544
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>gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, complete sequence
          Length = 178778

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cggcggccgccgccgcgatg 103
              ||||||||||||||||||||
Sbjct: 119095 cggcggccgccgccgcgatg 119076
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     cgctcgcgcgcggcggggtc 160
               ||||||||||||||||||||
Sbjct: 1955010 cgctcgcgcgcggcggggtc 1955029
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>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0032M14
          Length = 146636

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   cggcgccgctgggcgcgccg 195
             ||||||||||||||||||||
Sbjct: 70655 cggcgccgctgggcgcgccg 70674
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>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0485A07
          Length = 166397

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    cggcgccgctgggcgcgccg 195
              ||||||||||||||||||||
Sbjct: 120166 cggcgccgctgggcgcgccg 120185
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>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1469H02
          Length = 136602

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     gcggccgccgccgcgatggc 105
              ||||||||||||||||||||
Sbjct: 122266 gcggccgccgccgcgatggc 122285
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>dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1391J07,
           complete sequence
          Length = 121103

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cggcggccgccgccgcgatg 103
           ||||||||||||||||||||
Sbjct: 921 cggcggccgccgccgcgatg 940
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>dbj|AP006621.1| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-55F22, complete
              sequence
          Length = 129989

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cggcggccgccgccgcgatg 103
              ||||||||||||||||||||
Sbjct: 114597 cggcggccgccgccgcgatg 114616
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>ref|XM_316167.2| Anopheles gambiae str. PEST ENSANGP00000020328 (ENSANGG00000017839),
            partial mRNA
          Length = 6855

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  cttcctcggtggtgaggagctcgc 143
            |||||||||||||||| |||||||
Sbjct: 5893 cttcctcggtggtgagcagctcgc 5870
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>dbj|AK108598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E04, full
           insert sequence
          Length = 1660

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gcggccgccgccgcgatggc 105
           ||||||||||||||||||||
Sbjct: 363 gcggccgccgccgcgatggc 344
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>emb|AJ278476.1|HSA278476 Homo sapiens partial mRNA for transport-secretion protein 2.2,
           (TTS-2.2 gene)
          Length = 1962

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cggcggccgccgccgcgatg 103
           ||||||||||||||||||||
Sbjct: 76  cggcggccgccgccgcgatg 95
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>emb|AJ278475.1|HSA278475 Homo sapiens partial mRNA for transport-secretion protein 2.1
           (TTS-2.1 gene)
          Length = 1942

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cggcggccgccgccgcgatg 103
           ||||||||||||||||||||
Sbjct: 56  cggcggccgccgccgcgatg 75
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>dbj|AK059045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D08, full
           insert sequence
          Length = 1741

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gcggccgccgccgcgatggc 105
           ||||||||||||||||||||
Sbjct: 361 gcggccgccgccgcgatggc 342
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>emb|BX511203.3| Rattus norvegicus chromosome 1 clone RN-79C10, complete sequence
          Length = 157310

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   agtggctgatgctactagaa 353
             ||||||||||||||||||||
Sbjct: 43462 agtggctgatgctactagaa 43443
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 82      ggcggcggccgccgccgcga 101
               ||||||||||||||||||||
Sbjct: 2711798 ggcggcggccgccgccgcga 2711779
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 86      gcggccgccgccgcgatggc 105
               ||||||||||||||||||||
Sbjct: 2014705 gcggccgccgccgcgatggc 2014724
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gtcttcttcctcggtggtga 134
              ||||||||||||||||||||
Sbjct: 967989 gtcttcttcctcggtggtga 967970
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>ref|NM_020376.2| Homo sapiens patatin-like phospholipase domain containing 2
           (PNPLA2), mRNA
          Length = 2113

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cggcggccgccgccgcgatg 103
           ||||||||||||||||||||
Sbjct: 186 cggcggccgccgccgcgatg 205
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>emb|AL672290.16| Mouse DNA sequence from clone RP23-471M13 on chromosome X, complete
             sequence
          Length = 178341

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ccaacccacccccacaccca 64
             ||||||||||||||||||||
Sbjct: 74132 ccaacccacccccacaccca 74151


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,501,302
Number of Sequences: 3902068
Number of extensions: 4501302
Number of successful extensions: 93799
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92339
Number of HSP's gapped (non-prelim): 1459
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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