Clone Name | bart33c09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FRAT1_HUMAN (Q92837) Proto-oncogene FRAT1 (Frequently rearranged... | 33 | 0.57 | 2 | MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D) | 31 | 2.2 |
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>FRAT1_HUMAN (Q92837) Proto-oncogene FRAT1 (Frequently rearranged in advanced| T-cell lymphomas) (Frat-1) Length = 279 Score = 33.1 bits (74), Expect = 0.57 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +1 Query: 34 RSLQLVSSISLRGLISPLSAPRHQSPK-QQRHSSISIPGATKEKEAAAGQKV 186 R LQL + + R L+ PLSAP H+ P + ++ S PGA+ + G V Sbjct: 223 RRLQLRAKLPQRPLLGPLSAPVHEPPSPRSPRAACSDPGASGRAQLRTGDGV 274
>MYO1_CAEEL (P02567) Myosin-1 (Myosin heavy chain D) (MHC D)| Length = 1938 Score = 31.2 bits (69), Expect = 2.2 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 Query: 175 GQKVDQLRWILGGMGRGLY 231 GQ VDQ+ W +G M +GLY Sbjct: 412 GQNVDQVHWAIGAMAKGLY 430 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.130 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,795,476 Number of Sequences: 219361 Number of extensions: 903452 Number of successful extensions: 2725 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2446 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2716 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)