ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33c09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 91.7 bits (46), Expect = 2e-15 Identities = 87/100 (87%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 399 ccggaggcgtacgcgcagtactactacgcg---cgcgccgaacacgacgccaccgccatg 455 |||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||| Sbjct: 19660656 ccggagacgtacgcgcagtactactacgcggcgcgcgccgaccacgacgcctccgccatg 19660715 Query: 456 gtgtccgctctgtcccacgtcatccgcgccacacccgacc 495 || |||| || ||||||||||||||||| | ||||||| Sbjct: 19660716 gtcaccgcgctagcccacgtcatccgcgccgcccccgacc 19660755 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 24861909 ccgccgccaccgccgccgtc 24861890 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 7347524 ccgccgccaccgccgccgtc 7347543
>dbj|AK101501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C14, full insert sequence Length = 1854 Score = 91.7 bits (46), Expect = 2e-15 Identities = 87/100 (87%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 399 ccggaggcgtacgcgcagtactactacgcg---cgcgccgaacacgacgccaccgccatg 455 |||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||| Sbjct: 438 ccggagacgtacgcgcagtactactacgcggcgcgcgccgaccacgacgcctccgccatg 497 Query: 456 gtgtccgctctgtcccacgtcatccgcgccacacccgacc 495 || |||| || ||||||||||||||||| | ||||||| Sbjct: 498 gtcaccgcgctagcccacgtcatccgcgccgcccccgacc 537
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 91.7 bits (46), Expect = 2e-15 Identities = 87/100 (87%), Gaps = 3/100 (3%) Strand = Plus / Plus Query: 399 ccggaggcgtacgcgcagtactactacgcg---cgcgccgaacacgacgccaccgccatg 455 |||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||||| Sbjct: 111382 ccggagacgtacgcgcagtactactacgcggcgcgcgccgaccacgacgcctccgccatg 111441 Query: 456 gtgtccgctctgtcccacgtcatccgcgccacacccgacc 495 || |||| || ||||||||||||||||| | ||||||| Sbjct: 111442 gtcaccgcgctagcccacgtcatccgcgccgcccccgacc 111481
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 194 taaggtggatcctcggaggcatgggaagaggcctctacc 232 ||||||||| | |||||||||||||||| |||||||||| Sbjct: 19008023 taaggtggagcatcggaggcatgggaagcggcctctacc 19007985 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 21998867 ccgccgccaccgccgccgtc 21998848 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 15063603 ccgccgccaccgccgccgtc 15063622 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1655291 ccgccgccaccgccgccgtc 1655272
>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0003H22 Length = 68256 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 194 taaggtggatcctcggaggcatgggaagaggcctctacc 232 ||||||||| | |||||||||||||||| |||||||||| Sbjct: 63344 taaggtggagcatcggaggcatgggaagcggcctctacc 63306
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 194 taaggtggatcctcggaggcatgggaagaggcctctacc 232 ||||||||| | |||||||||||||||| |||||||||| Sbjct: 13544 taaggtggagcatcggaggcatgggaagcggcctctacc 13506
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 58/68 (85%), Gaps = 3/68 (4%) Strand = Plus / Plus Query: 399 ccggaggcgtacgcgcagtactactac---gcgcgcgccgaacacgacgccaccgccatg 455 |||||| |||||| ||||||||||||| |||||| |||| ||| ||||| |||||||| Sbjct: 14544318 ccggagacgtacgtgcagtactactacgcggcgcgcaccgaccacaacgcctccgccatg 14544377 Query: 456 gtgtccgc 463 || ||||| Sbjct: 14544378 gtctccgc 14544385 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 19650286 ccgccgccaccgccgccgtc 19650305 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 13999567 ccgccgccaccgccgccgtc 13999586
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 52.0 bits (26), Expect = 0.002 Identities = 58/68 (85%), Gaps = 3/68 (4%) Strand = Plus / Plus Query: 399 ccggaggcgtacgcgcagtactactac---gcgcgcgccgaacacgacgccaccgccatg 455 |||||| |||||| ||||||||||||| |||||| |||| ||| ||||| |||||||| Sbjct: 42607 ccggagacgtacgtgcagtactactacgcggcgcgcaccgaccacaacgcctccgccatg 42666 Query: 456 gtgtccgc 463 || ||||| Sbjct: 42667 gtctccgc 42674
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 237 gacgaggaggagaaaccgccgccaccgccgccg 269 |||||||||||||| |||||||| ||||||||| Sbjct: 135203 gacgaggaggagaagccgccgcccccgccgccg 135171
>gb|AE006004.1| Caulobacter crescentus CB15 section 330 of 359 of the complete genome Length = 14710 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 245 ggagaaaccgccgccaccgccgccg 269 ||||||||||||||||||||||||| Sbjct: 10873 ggagaaaccgccgccaccgccgccg 10849
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 237 gacgaggaggagaaaccgccgccaccgccgccg 269 |||||||||||||| |||||||| ||||||||| Sbjct: 12258628 gacgaggaggagaagccgccgcccccgccgccg 12258660 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtcagcagc 277 |||||||| ||||||||||||||||| Sbjct: 23227472 ccgccgccgccgccgccgtcagcagc 23227447
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 237 gacgaggaggagaaaccgccgccaccgccgccg 269 |||||||||||||| |||||||| ||||||||| Sbjct: 132120 gacgaggaggagaagccgccgcccccgccgccg 132152
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 237 gacgaggaggagaaaccgccgccaccgccgccg 269 |||||||||||||| |||||||| ||||||||| Sbjct: 17277 gacgaggaggagaagccgccgcccccgccgccg 17309
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 1517 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 384 gaaaccgccgccaccgccgccgtc 361
>emb|CR956424.18| Pig DNA sequence from clone PigE-234J24 on chromosome 6, complete sequence Length = 118731 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 26802 gaaaccgccgccaccgccgccgtc 26825
>ref|XM_809848.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503897.100) partial mRNA Length = 3768 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtcagcagcca 279 |||||||||||||||||| ||||||||| Sbjct: 3299 ccgccgccaccgccgccgacagcagcca 3272
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 113622 gaaaccgccgccaccgccgccgtc 113645
>emb|X57482.1|MMOCT6R M.musculus Oct-6 mRNA for octamer binding protein Length = 1504 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 349 gaaaccgccgccaccgccgccgtc 326
>emb|X56959.1|MDSCIP Mouse SCIP mRNA for a POU-domain transcription factor Length = 1516 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 365 gaaaccgccgccaccgccgccgtc 342
>emb|X54628.1|MMOCT6GR M. musculus oct6 gene for the octamer binding factor oct6 Length = 1517 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 384 gaaaccgccgccaccgccgccgtc 361
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete sequence Length = 208265 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 102065 gaaaccgccgccaccgccgccgtc 102088
>gb|M88302.1|MUSPOUDOMD Mouse scip POU-domain protein, complete cds Length = 2766 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||||||||||||||| Sbjct: 1030 gaaaccgccgccaccgccgccgtc 1007
>gb|AY686595.1| Canis familiaris dopamine D4 receptor gene, partial cds Length = 1851 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtcagcagcca 279 ||||||||||||||||| ||||||||| Sbjct: 1704 cgccgccaccgccgccgacagcagcca 1678
>ref|XM_843837.1| PREDICTED: Canis familiaris similar to D(4) dopamine receptor (D(2C) dopamine receptor) (LOC607223), mRNA Length = 1161 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtcagcagcca 279 ||||||||||||||||| ||||||||| Sbjct: 669 cgccgccaccgccgccgacagcagcca 643
>dbj|AB167773.1| Canis familiaris DRD4 gene for dopamine receptor D4, partial cds Length = 2664 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtcagcagcca 279 ||||||||||||||||| ||||||||| Sbjct: 1802 cgccgccaccgccgccgacagcagcca 1776
>ref|XM_482899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtcagcagc 277 |||||||| ||||||||||||||||| Sbjct: 224 ccgccgccgccgccgccgtcagcagc 199
>gb|AY323482.1| Oryza sativa (japonica cultivar-group) bZIP transcription factor (aba1) mRNA, complete cds Length = 1248 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtcagcagc 277 |||||||| ||||||||||||||||| Sbjct: 317 ccgccgccgccgccgccgtcagcagc 292
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 ccgccaccgccgccgtcagcag 276 |||||||||||||||||||||| Sbjct: 287400 ccgccaccgccgccgtcagcag 287421
>gb|AF165523.1|AF165523 Mycobacterium smegmatis penicillin-binding protein 1 (ponA) gene, complete cds Length = 2600 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 gaaaccgccgccaccgccgccg 269 |||||||||||||||||||||| Sbjct: 312 gaaaccgccgccaccgccgccg 333
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtcagcagc 277 |||||||| ||||||||||||||||| Sbjct: 26823 ccgccgccgccgccgccgtcagcagc 26798
>dbj|AB023288.1| Oryza sativa (japonica cultivar-group) mRNA for TRAB1, complete cds Length = 1169 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtcagcagc 277 |||||||| ||||||||||||||||| Sbjct: 237 ccgccgccgccgccgccgtcagcagc 212
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 accccgccggacccgccgctg 531 ||||||||||||||||||||| Sbjct: 299766 accccgccggacccgccgctg 299746
>gb|AY233216.1| Rattus norvegicus gap junction channel protein connexin47 (Cx47) gene, partial cds Length = 1228 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1026 gaaaccgccgccaccgccgcc 1006
>gb|AC115070.9| Mus musculus chromosome 5, clone RP24-406N3, complete sequence Length = 148789 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 532 tctctagagaacagcagcatcagca 556 ||||||||||||||||||| ||||| Sbjct: 69447 tctctagagaacagcagcagcagca 69423
>ref|XM_952942.1| Neurospora crassa OR74A hypothetical protein (NCU09449.1) partial mRNA Length = 3180 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 1841 ccgccgccaccgccgccgtca 1861
>ref|XM_332140.1| Neurospora crassa OR74A hypothetical protein (NCU09449.1) partial mRNA Length = 3180 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 1841 ccgccgccaccgccgccgtca 1861
>ref|XM_675698.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7521.2), mRNA Length = 1683 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 gccaagcacgagcaggtggag 296 ||||||||||||||||||||| Sbjct: 1624 gccaagcacgagcaggtggag 1644
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 gcagcatcagcacgctgcggccatc 569 ||||||||||| ||||||||||||| Sbjct: 1633521 gcagcatcagcgcgctgcggccatc 1633497 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgt 270 |||||||||||||||||||| Sbjct: 401433 accgccgccaccgccgccgt 401414
>gb|AC158923.4| Mus musculus chromosome 5, clone RP24-118B12, complete sequence Length = 167699 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 tctctagagaacagcagcatcagca 556 ||||||||||||||||||| ||||| Sbjct: 162794 tctctagagaacagcagcagcagca 162818
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 3615 ccgccgccaccgccgccgtca 3595
>dbj|AK150176.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530141N15 product:mahogunin, ring finger 1, full insert sequence Length = 2251 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgtc 271 ||||||||||||||||||||| Sbjct: 22 accgccgccaccgccgccgtc 2
>ref|NM_175452.2| Mus musculus gap junction membrane channel protein alpha 12 (Gja12), transcript variant 2, mRNA Length = 2190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1201 gaaaccgccgccaccgccgcc 1181
>ref|NM_080454.2| Mus musculus gap junction membrane channel protein alpha 12 (Gja12), transcript variant 1, mRNA Length = 2172 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1183 gaaaccgccgccaccgccgcc 1163
>dbj|AK169550.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630096D03 product:spondin 2, extracellular matrix protein, full insert sequence Length = 1285 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 tctctagagaacagcagcatcagca 556 ||||||||||||||||||| ||||| Sbjct: 900 tctctagagaacagcagcagcagca 924
>dbj|AK046421.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230382L12 product:gap junction membrane channel protein alpha 12, full insert sequence Length = 2190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1201 gaaaccgccgccaccgccgcc 1181
>dbj|AK046609.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430204K21 product:gap junction membrane channel protein alpha 12, full insert sequence Length = 2172 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1183 gaaaccgccgccaccgccgcc 1163
>gb|BC110283.1| Bos taurus cDNA clone MGC:134365 IMAGE:8040152, complete cds Length = 1313 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 aaccgccgccaccgccgccgt 270 ||||||||||||||||||||| Sbjct: 39 aaccgccgccaccgccgccgt 19
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgtc 271 ||||||||||||||||||||| Sbjct: 8125 accgccgccaccgccgccgtc 8105
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 2822583 ccgccgccaccgccgccgtca 2822563 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 19411138 ccgccgccaccgccgccgtc 19411157 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 14253841 ccgccgccaccgccgccgtc 14253822
>ref|XM_573100.1| PREDICTED: Rattus norvegicus similar to gap junction membrane channel protein alpha 12 (LOC497913), mRNA Length = 1508 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1277 gaaaccgccgccaccgccgcc 1257
>gb|AC055858.18| Homo sapiens chromosome 17, clone RP11-682M7, complete sequence Length = 167395 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 gagcaggtggaggagcaacag 305 ||||||||||||||||||||| Sbjct: 88107 gagcaggtggaggagcaacag 88087
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 1870076 ccgccgccaccgccgccgtca 1870056
>dbj|AK120380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072I24, full insert sequence Length = 786 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 273 ccgccgccaccgccgccgtca 253
>dbj|AK059657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D05, full insert sequence Length = 1149 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 146 ccgccgccaccgccgccgtca 126
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtc 271 ||||||||||||||||||||| Sbjct: 61271 accgccgccaccgccgccgtc 61291
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtca 272 ||||||||||||||||||||| Sbjct: 2822534 ccgccgccaccgccgccgtca 2822514 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 19422414 ccgccgccaccgccgccgtc 19422433 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 14262083 ccgccgccaccgccgccgtc 14262064
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 gagaacagcagcatcagcacg 558 ||||||||||||||||||||| Sbjct: 161596 gagaacagcagcatcagcacg 161616
>emb|AL645854.10| Mouse DNA sequence from clone RP23-192P17 on chromosome 11, complete sequence Length = 211829 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 159898 gaaaccgccgccaccgccgcc 159918
>emb|AJ276435.1|MMU276435 Mus musculus Cx47 gene for connexin 47 Length = 1380 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgcc 268 ||||||||||||||||||||| Sbjct: 1104 gaaaccgccgccaccgccgcc 1084
>ref|NM_148232.2| Arabidopsis thaliana unknown protein AT4G04885 mRNA, complete cds Length = 3102 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 agaaaccgccgccaccgccg 266 |||||||||||||||||||| Sbjct: 194 agaaaccgccgccaccgccg 213
>ref|NM_105424.3| Arabidopsis thaliana unknown protein AT1G67570 mRNA, complete cds Length = 2394 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 268 ccgccgccaccgccgccgtc 249
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgt 270 |||||||||||||||||||| Sbjct: 17428 accgccgccaccgccgccgt 17409 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgt 270 |||||||||||||||||||| Sbjct: 17374 accgccgccaccgccgccgt 17355
>ref|XM_475525.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 25 ccgccgccaccgccgccgtc 6
>ref|XM_466372.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2832 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2226 ccgccgccaccgccgccgtc 2207
>ref|XM_465424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 160 ccgccgccaccgccgccgtc 179
>ref|NM_197355.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0076F20.5), mRNA Length = 3478 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2183 ccgccgccaccgccgccgtc 2164
>ref|NM_196527.1| Oryza sativa (japonica cultivar-group) putative protein C prepropeptide (OSJNBa0053G13.1), mRNA Length = 657 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 496 ccgccgccaccgccgccgtc 515
>ref|NM_204253.1| Gallus gallus class II bHLH protein scleraxis (SCX), mRNA Length = 1133 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgtcagc 274 |||||||||||||||||| ||||| Sbjct: 156 accgccgccaccgccgccctcagc 133
>ref|XM_478079.1| Oryza sativa (japonica cultivar-group), mRNA Length = 468 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 415 ccgccgccaccgccgccgtc 396
>ref|XM_478078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 54 ccgccgccaccgccgccgtc 73
>ref|XM_469424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccgacgaggaggagaaa 251 |||||||||||||||||||| Sbjct: 913 ccgccgacgaggaggagaaa 894
>ref|XM_473041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1308 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 8 ccgccgccaccgccgccgtc 27
>gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0008A07, complete sequence Length = 135809 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 13957 ccgccgccaccgccgccgtc 13938
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgccgacgaggaggagaaa 251 |||||||||||||||||||| Sbjct: 117182 ccgccgacgaggaggagaaa 117201
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgccgacgaggaggagaaa 251 |||||||||||||||||||| Sbjct: 5214 ccgccgacgaggaggagaaa 5233
>ref|XM_865807.1| PREDICTED: Bos taurus hypothetical protein LOC614339 (LOC614339), partial mRNA Length = 457 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aaccgccgccaccgccgccg 269 |||||||||||||||||||| Sbjct: 239 aaccgccgccaccgccgccg 258
>ref|XM_359492.1| Magnaporthe grisea 70-15 hypothetical protein (MG05285.4) partial mRNA Length = 3120 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgt 270 |||||||||||||||||||| Sbjct: 1527 accgccgccaccgccgccgt 1508
>ref|XM_877698.1| PREDICTED: Bos taurus similar to CG13902-PA, transcript variant 2 (LOC507905), mRNA Length = 2037 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cagcagcatcagcacgctgc 562 |||||||||||||||||||| Sbjct: 233 cagcagcatcagcacgctgc 214
>ref|XM_584602.2| PREDICTED: Bos taurus similar to CG13902-PA, transcript variant 1 (LOC507905), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cagcagcatcagcacgctgc 562 |||||||||||||||||||| Sbjct: 233 cagcagcatcagcacgctgc 214
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 133361 ccgccgccaccgccgccgtc 133380
>gb|BT025493.1| Bos taurus hypothetical protein FLJ13798 (FLJ13798), mRNA, complete cds Length = 1923 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 cagcagcatcagcacgctgc 562 |||||||||||||||||||| Sbjct: 235 cagcagcatcagcacgctgc 216
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 taccagcgccgccggaagct 366 |||||||||||||||||||| Sbjct: 147771 taccagcgccgccggaagct 147752
>ref|XM_954402.1| Neurospora crassa OR74A hypothetical protein (NCU02236.1) partial mRNA Length = 1734 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1316 ccgccgccaccgccgccgtc 1335
>gb|AY541763.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase (GSTU38) gene, complete cds Length = 780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 31 ccgccgccaccgccgccgtc 12
>ref|XM_331011.1| Neurospora crassa OR74A hypothetical protein (NCU02236.1) partial mRNA Length = 1734 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1316 ccgccgccaccgccgccgtc 1335
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1839517 ccgccgccaccgccgccgtc 1839536
>ref|XM_611424.2| PREDICTED: Bos taurus similar to CGG triplet repeat binding protein 1, transcript variant 1 (LOC539802), mRNA Length = 2608 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 182 ccgccgccaccgccgccgtc 163
>ref|XM_875034.1| PREDICTED: Bos taurus similar to CGG triplet repeat binding protein 1, transcript variant 4 (LOC539802), mRNA Length = 2449 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 23 ccgccgccaccgccgccgtc 4
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 61378 ccgccgccaccgccgccgtc 61397
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgccgacgaggaggagaaa 251 |||||||||||||||||||| Sbjct: 27873052 ccgccgacgaggaggagaaa 27873071
>gb|AY453841.1| Oryctolagus cuniculus atherin mRNA, complete cds Length = 2560 Score = 40.1 bits (20), Expect = 7.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtcagcagcca 279 |||||||||||||||||| ||||||||| Sbjct: 939 ccgccgccaccgccgccg-cagcagcca 965
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ctagagaacagcagcatcag 554 |||||||||||||||||||| Sbjct: 201583 ctagagaacagcagcatcag 201564
>ref|XM_541491.2| PREDICTED: Canis familiaris similar to serine arginine-rich pre-mRNA splicing factor SR-A1 (LOC484376), mRNA Length = 3649 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1384 ccgccgccaccgccgccgtc 1365
>ref|NM_010450.1| Mus musculus homeo box A11 (Hoxa11), mRNA Length = 2246 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 650 ccgccgccaccgccgccgtc 631
>gb|AC008667.10| Homo sapiens chromosome 5 clone CTB-35F21, complete sequence Length = 189049 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 59791 ccgccgccaccgccgccgtc 59810
>ref|XM_965857.1| PREDICTED: Tribolium castaneum similar to CG5836-PA (LOC659564), mRNA Length = 1850 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1711 ccgccgccaccgccgccgtc 1730
>ref|XM_963500.1| PREDICTED: Tribolium castaneum similar to CG12330-PA (LOC657011), mRNA Length = 766 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 ggaggagaaaccgccgccaccgccgccg 269 |||||||||||||||||| || |||||| Sbjct: 235 ggaggagaaaccgccgcctccaccgccg 208
>emb|Y15219.1|OSC1ACTIV Oryza sativa mRNA for transcriptional activator Length = 1217 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 442 accgccgccaccgccgccgccggcagcc 469
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cctcatcgcgcacgcgctgc 333 |||||||||||||||||||| Sbjct: 931394 cctcatcgcgcacgcgctgc 931375
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 aaaccgccgccaccgccgcc 268 |||||||||||||||||||| Sbjct: 369154 aaaccgccgccaccgccgcc 369135
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtca 272 |||||||||||||||||||| Sbjct: 111578 cgccgccaccgccgccgtca 111559
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 10113 gaacagcagcatcagcacgc 10132
>emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022P19, complete sequence Length = 135836 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 74894 ccgccgccaccgccgccgtc 74913
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 agaaaccgccgccaccgccg 266 |||||||||||||||||||| Sbjct: 4180 agaaaccgccgccaccgccg 4199
>emb|AL161501.2|ATCHRIV13 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 13 Length = 200001 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 agaaaccgccgccaccgccg 266 |||||||||||||||||||| Sbjct: 199181 agaaaccgccgccaccgccg 199200
>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence Length = 169187 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 39833 ccgccgccaccgccgccgtc 39852
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtca 272 |||||||||||||||||||| Sbjct: 1682994 cgccgccaccgccgccgtca 1682975
>gb|AF505881.1| Gallus gallus bHLH transcription factor scleraxis mRNA, complete cds Length = 1133 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgtcagc 274 |||||||||||||||||| ||||| Sbjct: 156 accgccgccaccgccgccctcagc 133
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtcagca 275 ||||||||||||||||| |||||| Sbjct: 1408317 ccgccgccaccgccgccatcagca 1408340
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 4401126 gaacagcagcatcagcacgc 4401145
>gb|AC006836.7| Arabidopsis thaliana chromosome 2 clone F19B11 map RNSI, complete sequence Length = 87543 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 accaaagtccaaagcaacag 120 |||||||||||||||||||| Sbjct: 38309 accaaagtccaaagcaacag 38290
>gb|AC104814.5| Homo sapiens BAC clone RP11-683C4 from 4, complete sequence Length = 182155 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 tctctagagaacagcagcat 551 |||||||||||||||||||| Sbjct: 165605 tctctagagaacagcagcat 165586
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 15182 ccgccgccaccgccgccgtc 15201
>dbj|AK133481.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031409E18 product:homeo box A11, full insert sequence Length = 2286 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 693 ccgccgccaccgccgccgtc 674
>gb|AC105421.2| Homo sapiens BAC clone RP11-695A18 from 4, complete sequence Length = 162793 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 aaccgccgccaccgccgccgtcag 273 |||||||||| ||||||||||||| Sbjct: 112871 aaccgccgccgccgccgccgtcag 112894
>ref|XM_944120.1| PREDICTED: Homo sapiens hypothetical protein LOC650251 (LOC650251), mRNA Length = 867 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 541 ccgccgccaccgccgccgtc 522
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 39004 ccgccgccaccgccgccgtc 39023
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2167128 ccgccgccaccgccgccgtc 2167147
>emb|BX931937.2| Gallus gallus finished cDNA, clone ChEST551o16 Length = 1085 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtca 272 |||||||||||||||||||| Sbjct: 28 cgccgccaccgccgccgtca 9
>dbj|AK039171.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230104G09 product:hypothetical Lysine-rich region/Zinc finger C-x8-C-x5-C-x3-H type containing protein, full insert sequence Length = 2829 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 334 ccgccgccaccgccgccgtc 353
>gb|BC109943.1| Bos taurus cDNA clone MGC:134368 IMAGE:8042598, complete cds Length = 859 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aaccgccgccaccgccgccg 269 |||||||||||||||||||| Sbjct: 73 aaccgccgccaccgccgccg 92
>gb|AY517644.1| Chlamydomonas reinhardtii phosphoenolpyruvate carboxylase (Ppc1) mRNA, complete cds Length = 3902 Score = 40.1 bits (20), Expect = 7.7 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| |||||||| Sbjct: 2994 accgccgccaccgccgccg-cagcagcc 2968
>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence Length = 150102 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 caagcacgagcaggtggaggagca 301 ||||||| |||||||||||||||| Sbjct: 106687 caagcacaagcaggtggaggagca 106664
>ref|XM_393452.2| PREDICTED: Apis mellifera similar to CG2150-PA (LOC409962), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 246 gagaaaccgccgccaccgccgccg 269 |||||||| ||||||||||||||| Sbjct: 665 gagaaaccaccgccaccgccgccg 642
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cgccaccgccgccgtcagca 275 |||||||||||||||||||| Sbjct: 26425550 cgccaccgccgccgtcagca 26425531 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 ggaggagaaaccgccgccaccgccgccg 269 |||||||| |||||||||||||||||| Sbjct: 26033334 ggaggagaggccgccgccaccgccgccg 26033361 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2885996 ccgccgccaccgccgccgtc 2885977
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 17206927 ccgccgccaccgccgccgtc 17206908
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 27215070 ccgccgccaccgccgccgtc 27215089 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aaccgccgccaccgccgccg 269 |||||||||||||||||||| Sbjct: 18996313 aaccgccgccaccgccgccg 18996332 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 12114563 ccgccgccaccgccgccgtc 12114544 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 8717119 ccgccgccaccgccgccgtc 8717138 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 6623508 ccgccgccaccgccgccgtc 6623489 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 5326908 accgccgccaccgccgccgccggcagcc 5326935
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1219144 ccgccgccaccgccgccgtc 1219125
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgccgacgaggaggagaaa 251 |||||||||||||||||||| Sbjct: 27964376 ccgccgacgaggaggagaaa 27964395
>gb|AF257521.1|AF257521 Magnetospirillum magnetotacticum MagA gene, complete cds; and RNaseHII gene, partial cds Length = 1756 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 631 gaacagcagcatcagcacgc 612
>gb|AC027662.2|AC027662 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0053G13, complete sequence Length = 138245 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1116 ccgccgccaccgccgccgtc 1097
>emb|BX815725.1|CNS0AAMO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1614 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 271 ccgccgccaccgccgccgtc 252
>dbj|AB221691.1| Mus musculus adult male liver DNA, clone:V02Y028A13 Length = 1350 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||||||||| ||||||||||| Sbjct: 330 gaaaccgccgcctccgccgccgtc 307
>gb|AC011020.8|AC011020 Arabidopsis thaliana chromosome 1 BAC F12B7 genomic sequence, complete sequence Length = 91529 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 57880 ccgccgccaccgccgccgtc 57861
>ref|NM_138838.1| Rattus norvegicus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 2977 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||| ||||||||||||||||| Sbjct: 373 gaaacctccgccaccgccgccgtc 350
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gcagccaagcacgagcaggt 292 |||||||||||||||||||| Sbjct: 1176080 gcagccaagcacgagcaggt 1176099
>emb|BX933891.1| Gallus gallus finished cDNA, clone ChEST129g2 Length = 1558 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtca 272 |||||||||||||||||||| Sbjct: 28 cgccgccaccgccgccgtca 9
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 ggagaaaccgccgccaccgccgcc 268 |||||| ||||||||||||||||| Sbjct: 6410954 ggagaagccgccgccaccgccgcc 6410977 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 gtccccgtcaccggaggcgt 408 |||||||||||||||||||| Sbjct: 4853193 gtccccgtcaccggaggcgt 4853174
>gb|AC175394.3| Gallus gallus BAC clone TAM31-49F22 from chromosome w, complete sequence Length = 123919 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cgccgccaccgccgccgtca 272 |||||||||||||||||||| Sbjct: 115003 cgccgccaccgccgccgtca 114984
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 accgccgccaccgccgccgtcagc 274 |||||||||||||||| ||||||| Sbjct: 4911009 accgccgccaccgccggcgtcagc 4910986
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 125914 ccgccgccaccgccgccgtc 125895
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 12052 ccgccgccaccgccgccgtc 12033
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 47489 ccgccgccaccgccgccgtc 47470
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 69384 ccgccgccaccgccgccgtc 69403
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 aaccgccgccaccgccgccg 269 |||||||||||||||||||| Sbjct: 88983 aaccgccgccaccgccgccg 89002
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 92394 ccgccgccaccgccgccgtc 92375
>dbj|AB111884.1| Oryza glaberrima C gene for Myb protein, complete cds, haplotype:AF Length = 1288 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111883.1| Oryza rufipogon C gene for Myb protein, complete cds, haplotype:RU8 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111882.1| Oryza rufipogon C gene for Myb protein, complete cds, haplotype:RU7 Length = 1293 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 826 accgccgccaccgccgccgccggcagcc 853
>dbj|AB111881.1| Oryza rufipogon C gene for Myb protein, complete cds, haplotype:RU6 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111877.1| Oryza rufipogon C gene for Myb protein, complete cds, haplotype:RU2 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111876.1| Oryza rufipogon C gene for Myb protein, complete cds, haplotype:RU1 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111875.1| Oryza sativa (indica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA9 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111874.1| Oryza sativa (indica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA8 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111872.1| Oryza sativa (indica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA6 Length = 1284 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 817 accgccgccaccgccgccgccggcagcc 844
>dbj|AB111871.1| Oryza sativa (japonica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA5 Length = 1292 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 825 accgccgccaccgccgccgccggcagcc 852
>dbj|AB111870.1| Oryza sativa (japonica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA4 Length = 1260 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111869.1| Oryza sativa C gene for Myb protein, complete cds, haplotype:SA3 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111868.1| Oryza sativa (japonica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA2 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AB111867.1| Oryza sativa (japonica cultivar-group) C gene for Myb protein, complete cds, haplotype:SA1 Length = 1294 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 827 accgccgccaccgccgccgccggcagcc 854
>dbj|AP005968.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1156C07 Length = 182153 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 163426 ccgccgccaccgccgccgtc 163407
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468A12 Length = 143018 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 57352 ccgccgccaccgccgccgtc 57333
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 132101 ccgccgccaccgccgccgtc 132120
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 72086 ccgccgccaccgccgccgtc 72105
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 57634 ccgccgccaccgccgccgtc 57615
>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0015B15 Length = 123083 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 251 accgccgccaccgccgccgtcagcagcc 278 ||||||||||||||||||| | |||||| Sbjct: 68420 accgccgccaccgccgccgccggcagcc 68447
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 102041 ccgccgccaccgccgccgtc 102060
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 59768 ccgccgccaccgccgccgtc 59787
>dbj|AK119152.1| Arabidopsis thaliana At4g04885 mRNA for unknown protein, complete cds, clone: RAFL21-50-C04 Length = 2713 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 agaaaccgccgccaccgccg 266 |||||||||||||||||||| Sbjct: 176 agaaaccgccgccaccgccg 195
>dbj|AK120892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029N22, full insert sequence Length = 1780 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 340 ccgccgccaccgccgccgtc 321
>dbj|AK111002.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-F01, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 ggaggagaaaccgccgccaccgccgccg 269 |||||||| |||||||||||||||||| Sbjct: 461 ggaggagaggccgccgccaccgccgccg 488
>dbj|AK099054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149O10, full insert sequence Length = 1594 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 39 ccgccgccaccgccgccgtc 58
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 cgcgcgcgccgaacacgacgccaccgcc 452 ||||||||||| |||| ||||||||||| Sbjct: 2274302 cgcgcgcgccgtacaccacgccaccgcc 2274329
>dbj|AK066346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061P09, full insert sequence Length = 1215 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 53 ccgccgccaccgccgccgtc 72
>dbj|AK064910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M07, full insert sequence Length = 2833 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2227 ccgccgccaccgccgccgtc 2208
>dbj|AK059415.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D05, full insert sequence Length = 1595 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 38 ccgccgccaccgccgccgtc 57
>dbj|AK059055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F02, full insert sequence Length = 1418 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 451 ccgccgccaccgccgccgtc 432
>gb|AF118223.2|T4B21 Arabidopsis thaliana BAC T4B21 Length = 91470 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 agaaaccgccgccaccgccg 266 |||||||||||||||||||| Sbjct: 87503 agaaaccgccgccaccgccg 87522
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 68248 ccgccgccaccgccgccgtc 68229
>dbj|AB073546.1| Oryza sativa (japonica cultivar-group) OsCRY1a mRNA for cryptochrome 1a, complete cds Length = 2587 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 1901 ccgccgccaccgccgccgtc 1882
>dbj|AB001698.1| Magnetospirillum magneticum gene for MagA protein, complete cds, strain:MGT-1 Length = 1324 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 223 gaacagcagcatcagcacgc 204
>dbj|AB001696.1| Magnetospirillum magneticum gene for MagA protein, complete cds, strain:AMB-1, clone:3 Length = 1324 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 223 gaacagcagcatcagcacgc 204
>dbj|AB001694.1| Magnetospirillum magneticum gene for MagA protein, complete cds, strain:AMB-1, clone:10 Length = 1315 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 214 gaacagcagcatcagcacgc 195
>dbj|D32253.1|MGNMAGA Magnetospirillum magneticum genes for MagA and hypothetical protein, complete cds, strain:AMB-1 Length = 2975 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaacagcagcatcagcacgc 559 |||||||||||||||||||| Sbjct: 1092 gaacagcagcatcagcacgc 1073
>gb|AC121139.20| Mus musculus chromosome 5, clone RP23-429G1, complete sequence Length = 206249 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 ctctagagaacagcagcatcagca 556 |||||||||||||||||| ||||| Sbjct: 145333 ctctagagaacagcagcaacagca 145356
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 349725 ccgccgccaccgccgccgtc 349744
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cgccaccgccgccgtcagca 275 |||||||||||||||||||| Sbjct: 26353719 cgccaccgccgccgtcagca 26353700 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 ggaggagaaaccgccgccaccgccgccg 269 |||||||| |||||||||||||||||| Sbjct: 25961510 ggaggagaggccgccgccaccgccgccg 25961537 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2885940 ccgccgccaccgccgccgtc 2885921
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 130106 ccgccgccaccgccgccgtc 130125
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 ggaggagaaaccgccgccaccgccgccg 269 |||||||| |||||||||||||||||| Sbjct: 78337 ggaggagaggccgccgccaccgccgccg 78310
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgccaccgccgccgtcagca 275 |||||||||||||||||||| Sbjct: 116526 cgccaccgccgccgtcagca 116545
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 123625 ccgccgccaccgccgccgtc 123606
>gb|BC052232.1| Mus musculus cDNA clone IMAGE:6504963 Length = 2307 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 671 ccgccgccaccgccgccgtc 652
>gb|U20371.1|MMU20371 Mus musculus homeobox protein (Hoxa11) gene, complete cds Length = 9038 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 5309 ccgccgccaccgccgccgtc 5290
>gb|U20370.1|MMU20370 Mus musculus homeobox protein (Hoxa11) mRNA, complete cds Length = 2243 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 649 ccgccgccaccgccgccgtc 630
>gb|U20367.1|MMU20367 Mus musculus Hoxa11 locus antisense-3C mRNA Length = 1434 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 37 ccgccgccaccgccgccgtc 56
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 69430 ccgccgccaccgccgccgtc 69411
>gb|M63712.1|RATTST1POU Rat POU domain protein (Tst-1) mRNA, 3' end Length = 1549 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||| ||||||||||||||||| Sbjct: 234 gaaacctccgccaccgccgccgtc 211
>gb|M72711.1|RATSCIP Rat transcriptional repressor of myelin-specific genes (SCIP) mRNA, complete cds Length = 2977 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 gaaaccgccgccaccgccgccgtc 271 |||||| ||||||||||||||||| Sbjct: 373 gaaacctccgccaccgccgccgtc 350
>dbj|AB024337.1| Oryza sativa (japonica cultivar-group) mRNA for blue-light photoreceptor, complete cds Length = 2797 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ccgccgccaccgccgccgtc 271 |||||||||||||||||||| Sbjct: 2174 ccgccgccaccgccgccgtc 2155 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,057,894 Number of Sequences: 3902068 Number of extensions: 4057894 Number of successful extensions: 123666 Number of sequences better than 10.0: 200 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 117789 Number of HSP's gapped (non-prelim): 5876 length of query: 569 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 546 effective length of database: 17,143,297,704 effective search space: 9360240546384 effective search space used: 9360240546384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
