>CSMD3_HUMAN (Q7Z407) CUB and sushi domain-containing protein 3 precursor (CUB|
           and sushi multiple domains protein 3)
          Length = 3670

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 56  DYSDVRGEYPPAVYSALERHLPPSLLEADRDVKLHFMRDILPRY 187
           DY ++ G  PP ++ +   ++PP ++     ++LHF+ D   RY
Sbjct: 256 DYLEIEGSEPPTIWLS-GMNIPPPIISNKNWLRLHFVTDSNHRY 298

>TMEPA_HUMAN (Q969W9) Transmembrane prostate androgen-induced protein (Solid|
           tumor-associated 1 protein)
          Length = 287

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 41  EHKPQDYSDVRGEYPPAVYSALERHLPPSLLEADR 145
           E  P  YS+V G YP + +   +   PPSLLE  R
Sbjct: 226 EGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTR 260

>TMEPA_MOUSE (Q9D7R2) Transmembrane prostate androgen-induced protein (NEDD4 WW|
           domain-binding protein 4)
          Length = 260

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 41  EHKPQDYSDVRGEYPPAVYSALERHLPPSLLEADR 145
           E  P  YS+V G YP + +   + + P SLLE  R
Sbjct: 204 EGPPPTYSEVIGHYPGSSFQHQQSNGPSSLLEGTR 238

>Y254_BACTN (Q8AB57) UPF0313 protein BT_0254|
          Length = 620

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 23  RLNPNTEHKPQDYSDVRGEYPPAVYSALERHLPPSL 130
           RL     + P    D+R EYP  VYS + + L P +
Sbjct: 101 RLRSEDAYTPDGRPDMRPEYPSIVYSQILKRLYPDV 136

>DP2L_THEVO (Q97CR6) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
          Length = 1088

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 26  LNPNTEHKPQDYSDVRGEYPPAVYSALERHLPPSLLE 136
           +NP+   K     D   +YP   Y A ERH  PS LE
Sbjct: 874 INPDEIDKEALNVDTLQKYPLIFYEATERHAAPSELE 910


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,599,698
Number of Sequences: 219361
Number of extensions: 342022
Number of successful extensions: 1215
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 80,573,946
effective HSP length: 41
effective length of database: 71,580,145
effective search space used: 1717923480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)