ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33b08 |
|---|---|
| Clone Library Name | barley_pub |
>MSBP1_ARATH (Q9XFM6) Membrane steroid-binding protein 1 (AtMP1)| Length = 220 Score = 179 bits (454), Expect = 5e-45 Identities = 95/152 (62%), Positives = 104/152 (68%), Gaps = 5/152 (3%) Frame = +2 Query: 110 ELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXXXX 289 ELW+TLK+AI AYTGLSP +Y V+SG FA Sbjct: 4 ELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEE 63 Query: 290 X-----VQLGGVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKD 454 VQ+G + EEEL+QYDGSDP+KPLLMAIK QIYDVTQSRMFYGPGGPYALFAGKD Sbjct: 64 PPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKD 123 Query: 455 ASRALAKMSFEPQDLNGDTSGLGPFELDALQD 550 ASRALAKMSFE +DL D SGLGPFELDALQD Sbjct: 124 ASRALAKMSFEEKDLTWDVSGLGPFELDALQD 155
>SBP2_ARATH (Q9M2Z4) Putative steroid binding protein 2 (AtMP2)| Length = 233 Score = 176 bits (447), Expect = 3e-44 Identities = 94/150 (62%), Positives = 102/150 (68%), Gaps = 1/150 (0%) Frame = +2 Query: 104 VAELWETLKQAILAYTGLSPXXXXXXXXXXXXLYHVVSGIFAXXXXXXXXXXXXXXXXXX 283 V ++WETLK+ I AYTGLSP +Y VVSG F Sbjct: 2 VQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVHRPRSLEVQPQSEP 61 Query: 284 XXX-VQLGGVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDAS 460 VQLG + EEEL+ YDGSD KKPLLMAIKGQIYDV+QSRMFYGPGGPYALFAGKDAS Sbjct: 62 LPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDAS 121 Query: 461 RALAKMSFEPQDLNGDTSGLGPFELDALQD 550 RALAKMSFE QDL GD SGLG FEL+ALQD Sbjct: 122 RALAKMSFEDQDLTGDISGLGAFELEALQD 151
>NENF_MOUSE (Q9CQ45) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 171 Score = 89.4 bits (220), Expect = 6e-18 Identities = 41/79 (51%), Positives = 55/79 (69%) Frame = +2 Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY AGKD+SR +AKMS +P Sbjct: 48 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 494 DLNGDTSGLGPFELDALQD 550 DL DT+GL EL+AL D Sbjct: 108 DLTHDTTGLTAKELEALDD 126
>NENF_RAT (Q6IUR5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Spinal cord injury-related protein 10) (SCIRP10-related protein) Length = 171 Score = 88.6 bits (218), Expect = 1e-17 Identities = 41/79 (51%), Positives = 54/79 (68%) Frame = +2 Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY AGKD+SR +AKMS +P Sbjct: 48 EEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPA 107 Query: 494 DLNGDTSGLGPFELDALQD 550 DL D SGL EL+AL D Sbjct: 108 DLTHDISGLTAKELEALDD 126
>SBP3_ARATH (Q9SK39) Putative steroid-binding protein 3 (AtMP3)| Length = 100 Score = 87.8 bits (216), Expect = 2e-17 Identities = 40/78 (51%), Positives = 56/78 (71%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+L QY+G+D KP+ +AIKG+++DVT + FYG GG Y++FAGKDASRAL KMS +D Sbjct: 6 EQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEED 65 Query: 497 LNGDTSGLGPFELDALQD 550 ++ GL E++ L D Sbjct: 66 VSPSLEGLTEKEINTLND 83
>NENF_HUMAN (Q9UMX5) Neudesin precursor (Neuron-derived neurotrophic factor)| (Secreted protein of unknown function) (SPUF protein) Length = 172 Score = 85.1 bits (209), Expect = 1e-16 Identities = 38/79 (48%), Positives = 54/79 (68%) Frame = +2 Query: 314 EEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQ 493 EEEL +Y G + +P+ +A+KG ++DVT + FYG G PY GKD++R +AKMS +P Sbjct: 49 EEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPA 108 Query: 494 DLNGDTSGLGPFELDALQD 550 DL DT+GL EL+AL + Sbjct: 109 DLTHDTTGLTAKELEALDE 127
>PGRC1_RAT (P70580) Membrane-associated progesterone receptor component 1| (Acidic 25 kDa protein) (25-DX) Length = 194 Score = 74.3 bits (181), Expect = 2e-13 Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 4/81 (4%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR+YDG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRYDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 497 LN---GDTSGLGPFELDALQD 550 L D S L P + + L D Sbjct: 134 LKDEYDDLSDLTPAQQETLND 154
>PGRC1_MOUSE (O55022) Membrane-associated progesterone receptor component 1| Length = 194 Score = 72.8 bits (177), Expect = 6e-13 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 4/81 (4%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 497 LN---GDTSGLGPFELDALQD 550 L D S L P + + L D Sbjct: 134 LKDEYDDLSDLTPAQQETLSD 154
>PGRC1_PIG (Q95250) Membrane-associated progesterone receptor component 1| Length = 193 Score = 72.8 bits (177), Expect = 6e-13 Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 4/81 (4%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 75 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 132 Query: 497 LN---GDTSGLGPFELDALQD 550 L D S L P + + L D Sbjct: 133 LKDEYDDLSDLTPAQQETLND 153
>PGRC2_HUMAN (O15173) Membrane-associated progesterone receptor component 2| (Progesterone membrane-binding protein) (Steroid receptor protein DG6) Length = 223 Score = 70.5 bits (171), Expect = 3e-12 Identities = 35/77 (45%), Positives = 51/77 (66%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+LRQYDGS + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 106 EQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 164 Query: 497 LNGDTSGLGPFELDALQ 547 L + L +L+A+Q Sbjct: 165 LRDEYDDLS--DLNAVQ 179
>PGRC2_MOUSE (Q80UU9) Membrane associated progesterone receptor component 2| (Fragment) Length = 214 Score = 69.7 bits (169), Expect = 5e-12 Identities = 34/77 (44%), Positives = 51/77 (66%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 97 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 155 Query: 497 LNGDTSGLGPFELDALQ 547 L + L +L+A+Q Sbjct: 156 LRDEYDDLS--DLNAVQ 170
>PGRC1_HUMAN (O00264) Membrane-associated progesterone receptor component 1| (mPR) Length = 194 Score = 69.7 bits (169), Expect = 5e-12 Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 4/81 (4%) Frame = +2 Query: 320 ELRQYDG-SDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 ELR++DG DP+ +LMAI G+++DVT+ R FYGP GPY +FAG+DASR LA + + Sbjct: 76 ELRRFDGVQDPR--ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEA 133 Query: 497 LN---GDTSGLGPFELDALQD 550 L D S L + + L D Sbjct: 134 LKDEYDDLSDLTAAQQETLSD 154
>PGRC2_RAT (Q5XIU9) Membrane associated progesterone receptor component 2| Length = 217 Score = 69.7 bits (169), Expect = 5e-12 Identities = 34/77 (44%), Positives = 51/77 (66%) Frame = +2 Query: 317 EELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQD 496 E+LRQYDG+ + +L+A+ G+++DVT+ FYGP GPY +FAG+DASR LA + Sbjct: 100 EQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDA 158 Query: 497 LNGDTSGLGPFELDALQ 547 L + L +L+A+Q Sbjct: 159 LRDEYDDLS--DLNAVQ 173
>YL81_SCHPO (O13995) Hypothetical protein C25B8.01 in chromosome I| Length = 166 Score = 65.9 bits (159), Expect = 7e-11 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 7/84 (8%) Frame = +2 Query: 320 ELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDL 499 EL++Y+GS + +AIKG +Y+VT FYGP GPY+ FAG DASR LAK SF+ + + Sbjct: 47 ELKEYNGSK-NSLVFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFI 105 Query: 500 N-------GDTSGLGPFELDALQD 550 D S L E AL D Sbjct: 106 PDSDAEELDDCSDLNDEERQALND 129
>DAP1_YEAST (Q12091) Damage response protein 1| Length = 152 Score = 63.2 bits (152), Expect = 5e-10 Identities = 31/65 (47%), Positives = 42/65 (64%) Frame = +2 Query: 293 VQLGGVDEEELRQYDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALA 472 V G L +++G D +K + +AI+G++YD T+ R FYGP GPY FAG DASR LA Sbjct: 39 VVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLA 97 Query: 473 KMSFE 487 SF+ Sbjct: 98 LNSFD 102
>GLPK_XANCP (Q8PDI0) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFEL 535 ++Y +TQ++ FYG P A AG + + FEP + +T G G F L Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272
>GLPK_XANAC (Q8PQG7) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 499 Score = 32.0 bits (71), Expect = 1.2 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFEL 535 ++Y +TQ++ FYG P A AG + + FEP + +T G G F L Sbjct: 222 EVYGMTQTQYFYGEQVPIAGIAGDQQAALFGQACFEP-GMAKNTYGTGCFML 272
>GLPK_ENTFA (O34154) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 500 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529 ++Y +T++ FYG P A AG + +M+FEP + +T G G F Sbjct: 221 EVYGLTKNYHFYGSEVPIAGMAGDQQAALFGQMAFEP-GMVKNTYGTGSF 269
>Y3770_BACSK (Q5WBF8) UPF0271 protein ABC3770| Length = 253 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = +2 Query: 332 YDGSDPKKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDT 511 Y+ + + L AI +YDV + +FYG G + AGK A A F + D Sbjct: 116 YNMAAADQALAEAIANAVYDVDPNLVFYGLAGSALIAAGKKAGLKTASEVFADRTYQADG 175 Query: 512 S 514 S Sbjct: 176 S 176
>GLPK_LACLA (Q9CG64) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 498 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +2 Query: 380 QIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPF 529 ++Y VT+ F+G P + AG + +M+FEP + +T G G F Sbjct: 223 EVYGVTKGFHFFGSEVPISGMAGDQQAALFGQMAFEPGMIK-NTYGTGSF 271
>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22| Length = 831 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +3 Query: 312 MRRSSASTTGPTPRNPSSWPSRARSMTSRRAECSMDLVDLMPYSLAKTPA 461 M RS + + P PR+PS P R S +SR + D D+ Y ++P+ Sbjct: 1 MPRSLSRSVSPRPRSPSLSPPRPDSRSSRGRSLTPD--DIPAYKRKRSPS 48
>DX26B_MOUSE (Q8BND4) Protein DDX26B| Length = 861 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = -1 Query: 551 SLVVRRARTAQGPKYHRSGPGARKTSWLELCWRLCQR-IGHK----VHQVH 414 SL++RRA+TA H G G SW C L + GH +H H Sbjct: 628 SLLLRRAQTAPTVTNHVGGKGPLSASWFPSCPSLVKHTFGHPDTTVIHDTH 678 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,090,934 Number of Sequences: 219361 Number of extensions: 985907 Number of successful extensions: 3355 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3349 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
