Clone Name | bart33b07 |
---|---|
Clone Library Name | barley_pub |
>MRJP5_APIME (O97432) Major royal jelly protein 5 precursor (MRJP-5) (Bee-milk| protein) Length = 598 Score = 32.7 bits (73), Expect = 0.71 Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Frame = +2 Query: 260 KAERMNDFEYA-RMNTVPDVKQWDKLSYHQEDNKMDHLNLGLMNLDLKMNDLKMNEAAMK 436 + +RM+ + +M+ + + + D++ N+MD +N ++ +MN+ M + Sbjct: 497 RMDRMDTMDRTDKMSRIDRMDKIDRMDRMDRTNRMDRMN----RMNRQMNEYMMALSMKL 552 Query: 437 YPFRNMAYNMNPMYPKGNNGNVNSFKMN---VGVNKYPNNQN 553 F N YN N + + NVN MN + NNQN Sbjct: 553 QKFINNDYNFNEVNFRILGANVNDLIMNTRCANSDNQNNNQN 594
>GRPE_MYCPN (P78017) Protein grpE (HSP-70 cofactor)| Length = 217 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Frame = +2 Query: 107 RIRGRIEQAESLN*AMDNLWHLGDEFRGQSKVVEDRQWSLMTSKLAEIT-KSKAERMNDF 283 + + +++ L + NL + +EFR + + +++ + K+AE+T KSK E N Sbjct: 44 KFKQQVQNFNELQQKIPNLQKVNEEFRLKVEKIQEEAQKKIQEKVAELTIKSKEELENAK 103 Query: 284 EYARMNTVPD----VKQWD-KLSYHQEDNKMDHLNLG 379 +Y ++ + Q++ LSY Q+D ++ + G Sbjct: 104 KYVIEKSIDQPLIIIDQFEIALSYAQKDPQVKNYTTG 140
>DICER_HUMAN (Q9UPY3) Endoribonuclease Dicer (EC 3.1.26.-) (Helicase with RNase| motif) (Helicase-MOI) Length = 1912 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/76 (23%), Positives = 33/76 (43%) Frame = +2 Query: 242 AEITKSKAERMNDFEYARMNTVPDVKQWDKLSYHQEDNKMDHLNLGLMNLDLKMNDLKMN 421 A + S++ + D EY + P + D ++HL G N + K+N N Sbjct: 1614 ASVASSRSSVLKDSEYGCLKIPPRCM----FDHPDADKTLNHLISGFENFEKKINYRFKN 1669 Query: 422 EAAMKYPFRNMAYNMN 469 +A + F + +Y+ N Sbjct: 1670 KAYLLQAFTHASYHYN 1685
>XTP3B_MOUSE (Q8VEH8) XTP3-transactivated gene B protein homolog precursor| Length = 483 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +2 Query: 398 KMNDLKMNEAAMKYPFRNMAYNMNPMYPKG-NNGNVNSFKMN 520 K + K NE + + P +N+ M P YP G NG S K N Sbjct: 163 KEREAKENEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQN 204
>HFLK_BUCAP (Q8K914) Protein hflK| Length = 411 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +2 Query: 299 NTVPDVKQWDKLSYHQEDNKMDHLNLGLMNLDLKMNDLKMNEAAMKYPFRNMAYNMNPMY 478 N+ P++ W K + QE N G N D D K +E + F+ YN+N ++ Sbjct: 8 NSEPELDPWGKKN-SQEKN-------GSKNKD----DRKNHEKIITLDFKKFLYNINNIF 55 Query: 479 PKGNNG-NVNSFKMN 520 K NN N++ K+N Sbjct: 56 NKTNNSQNLSKNKIN 70
>YEA7_YEAST (P40002) Hypothetical 72.5 kDa protein in GCN4-WBP1 intergenic| region Length = 666 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +2 Query: 416 MNEAAMKYPFRNMAYNMNPMYPKGNNGNVNSFKMNVGVNKYPNNQN 553 + + A P + Y NP Y + N N+ MN VN NN N Sbjct: 296 ITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSN 341
>VG66_BPMD2 (O64258) Gene 66 protein (Gp66)| Length = 199 Score = 29.3 bits (64), Expect = 7.9 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 152 MDNLWHLGDEFRGQSKVVEDRQWS 223 M N+W D G +KV EDR W+ Sbjct: 1 MSNVWFTSDLHIGHAKVAEDRDWA 24
>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1003 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 136 LRLLDPAPNSDGEGAARKGKERRLGLARLPLRSAHTESTGQR 11 L LL P S G +++ + R GLAR P + H S +R Sbjct: 863 LELLAPKSRSPSPGKSKRHRSRSPGLARFPSLALHPSSRERR 904 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,757,829 Number of Sequences: 219361 Number of extensions: 1364436 Number of successful extensions: 3876 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3676 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3851 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)