Clone Name | bart33b04 |
---|---|
Clone Library Name | barley_pub |
>gb|AF000939.1|AF000939 Hordeum vulgare aleurone ribonuclease mRNA, partial cds Length = 739 Score = 1094 bits (552), Expect = 0.0 Identities = 558/560 (99%) Strand = Plus / Plus Query: 9 acaggccaagatgaagctcgtcgtgctctcggccctgctcctgctttctctcgtcgccgt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 acaggccaagatgaagctcgtcgtgctctcggccctgctcctgctttctctcgtcgccgt 69 Query: 69 ctcctcggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctg 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 ctcctcggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctg 129 Query: 129 tgacacgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcat 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 tgacacgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcat 189 Query: 189 ccacgggctctggcccaactacgccgagtgcaagacccgcggcgagctcgacggcgcctt 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 190 ccacgggctctggcccaactacgccgagtgcaagacccgcggcgagctcgacggtgcctt 249 Query: 249 ggagatggtgaccaggcggaggaagaagtgctggccggagtcctgcaacagcgagcgcct 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 ggagatggtgaccaggcggaggaagaagtgctggccggagtcctgcaacagcgagcgcct 309 Query: 309 caagctctgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 caagctctgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggc 369 Query: 369 gtgcaagggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gtgcaagggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctg 429 Query: 429 ctccaacctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaa 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 430 ctccaacctggaccagcacggctacttggcgacggcgctcggcttcaaggcccgccacaa 489 Query: 489 cctcaccagcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcct 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 cctcaccagcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcct 549 Query: 549 cagcagcatcagggacgcca 568 |||||||||||||||||||| Sbjct: 550 cagcagcatcagggacgcca 569
>ref|NM_193078.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1085 Score = 168 bits (85), Expect = 1e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 316 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 375 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 402 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 461 Query: 376 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 435 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 462 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 521 Query: 436 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 495 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 522 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 581 Query: 496 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 555 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 582 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 641 Query: 556 atcagggacgcca 568 ||| | ||||||| Sbjct: 642 atccgcgacgcca 654 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 82 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 141 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 120 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 179 Query: 142 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 201 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 180 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 239 Query: 202 cccaactacgccgagtgc 219 |||||||||||| ||||| Sbjct: 240 cccaactacgccaagtgc 257 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggccggagtcctgc 294 ||||| || |||||||||||||||||| |||| Sbjct: 346 ggcggcggcagaagtgctggccggagtactgc 377
>ref|XM_506490.1| PREDICTED Oryza sativa (japonica cultivar-group), P0011H09.133 mRNA Length = 1097 Score = 168 bits (85), Expect = 1e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 316 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 375 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 404 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 463 Query: 376 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 435 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 464 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 523 Query: 436 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 495 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 524 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 583 Query: 496 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 555 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 584 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 643 Query: 556 atcagggacgcca 568 ||| | ||||||| Sbjct: 644 atccgcgacgcca 656 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 82 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 141 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 122 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 181 Query: 142 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 201 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 182 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 241 Query: 202 cccaactacgccgagtgc 219 |||||||||||| ||||| Sbjct: 242 cccaactacgccaagtgc 259 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggccggagtcctgc 294 ||||| || |||||||||||||||||| |||| Sbjct: 348 ggcggcggcagaagtgctggccggagtactgc 379
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 168 bits (85), Expect = 1e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 316 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 375 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 26088648 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 26088707 Query: 376 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 435 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 26088708 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 26088767 Query: 436 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 495 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 26088768 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 26088827 Query: 496 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 555 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 26088828 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 26088887 Query: 556 atcagggacgcca 568 ||| | ||||||| Sbjct: 26088888 atccgcgacgcca 26088900 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 142 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 201 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 26088426 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 26088485 Query: 202 cccaactacgccgagtgc 219 |||||||||||| ||||| Sbjct: 26088486 cccaactacgccaagtgc 26088503 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 389 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 448 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 26074264 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 26074323 Query: 449 gctacttcg 457 |||||||| Sbjct: 26074324 cctacttcg 26074332 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 397 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 456 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 26045957 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 26046016 Query: 457 gc 458 || Sbjct: 26046017 gc 26046018 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 486 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 531 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 26046052 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 26046097 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggccggagtcctgc 294 ||||| || |||||||||||||||||| |||| Sbjct: 26088592 ggcggcggcagaagtgctggccggagtactgc 26088623 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tcgcgacggcgctcggcttc 474 |||||||||||||||||||| Sbjct: 23551382 tcgcgacggcgctcggcttc 23551363
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 168 bits (85), Expect = 1e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 316 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 375 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 122210 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 122269 Query: 376 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 435 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 122270 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 122329 Query: 436 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 495 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 122330 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 122389 Query: 496 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 555 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 122390 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 122449 Query: 556 atcagggacgcca 568 ||| | ||||||| Sbjct: 122450 atccgcgacgcca 122462 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 142 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 201 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 121988 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 122047 Query: 202 cccaactacgccgagtgc 219 |||||||||||| ||||| Sbjct: 122048 cccaactacgccaagtgc 122065 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 389 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 448 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 107826 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 107885 Query: 449 gctacttcg 457 |||||||| Sbjct: 107886 cctacttcg 107894 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 397 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 456 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 79519 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 79578 Query: 457 gc 458 || Sbjct: 79579 gc 79580 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 486 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 531 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 79614 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 79659 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggccggagtcctgc 294 ||||| || |||||||||||||||||| |||| Sbjct: 122154 ggcggcggcagaagtgctggccggagtactgc 122185
>dbj|AK104512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H11, full insert sequence Length = 1085 Score = 168 bits (85), Expect = 1e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 316 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 375 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 402 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 461 Query: 376 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 435 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 462 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 521 Query: 436 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 495 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 522 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 581 Query: 496 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 555 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 582 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 641 Query: 556 atcagggacgcca 568 ||| | ||||||| Sbjct: 642 atccgcgacgcca 654 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 82 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 141 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 120 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 179 Query: 142 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 201 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 180 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 239 Query: 202 cccaactacgccgagtgc 219 |||||||||||| ||||| Sbjct: 240 cccaactacgccaagtgc 257 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggccggagtcctgc 294 ||||| || |||||||||||||||||| |||| Sbjct: 346 ggcggcggcagaagtgctggccggagtactgc 377
>dbj|AK060320.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F07, full insert sequence Length = 1097 Score = 168 bits (85), Expect = 1e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 316 tgggaaatcagggacctggtgacggagctggacgccaactggccgacgctggcgtgcaag 375 ||||| |||| |||||| ||| ||||||| || || ||||||||||||||| |||||||| Sbjct: 404 tgggagatcaaggacctcgtggcggagctcgatgcgaactggccgacgctgtcgtgcaag 463 Query: 376 ggcgggaagagcttcgagttctggacccacgagtgggagaagcacggcacctgctccaac 435 ||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| | Sbjct: 464 ggcggcaagagcttcgagttctggagctacgagtggaagaagcacggcacctgctcgggc 523 Query: 436 ctggaccagcacggctacttcgcgacggcgctcggcttcaaggcccgccacaacctcacc 495 ||| ||||||||||||||||||| ||||||| | ||||| || ||| ||||| || Sbjct: 524 atgggccagcacggctacttcgcggcggcgctggagctcaagaagcggcacgacctcgcc 583 Query: 496 agcatcctcgccgacgccgggatcgtgccgtccgacaccgagacctacttcctcagcagc 555 | ||||||||| |||||| ||||| || |||||| ||||| ||||| |||| ||||| Sbjct: 584 gccgtcctcgccggcgccggcatcgtcccctccgacgacgagagctactccctcggcagc 643 Query: 556 atcagggacgcca 568 ||| | ||||||| Sbjct: 644 atccgcgacgcca 656 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 82 gaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaag 141 |||||||| ||||||||||| || ||||| ||||| || || ||||| |||||| || Sbjct: 122 gaattcgacttcttctacctcgtccagcagtggcctggctcgttctgcgacacgcaggct 181 Query: 142 gggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctgg 201 ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| Sbjct: 182 gggtgctgcttcccggacaccggcaagccggcggcggagttcggcatccacggcctgtgg 241 Query: 202 cccaactacgccgagtgc 219 |||||||||||| ||||| Sbjct: 242 cccaactacgccaagtgc 259 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggccggagtcctgc 294 ||||| || |||||||||||||||||| |||| Sbjct: 348 ggcggcggcagaagtgctggccggagtactgc 379
>ref|XM_482552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1021 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 171 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 230 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 231 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 287 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 419 gttctgggcgcacgagtgggagaagcacggcacctgc 455
>ref|XM_507238.1| PREDICTED Oryza sativa (japonica cultivar-group), P0431A03.26 mRNA Length = 1178 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 172 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 231 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 232 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 288 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 420 gttctgggcgcacgagtgggagaagcacggcacctgc 456
>ref|NM_193075.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 389 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 448 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 323 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 382 Query: 449 gctacttcg 457 |||||||| Sbjct: 383 cctacttcg 391
>gb|AY528721.1| Triticum aestivum S-like RNase (WRN3) mRNA, partial cds Length = 799 Score = 89.7 bits (45), Expect = 9e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 87 cgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtg 146 ||||||||||||||| |||| ||| ||||| ||||| | ||| ||||||||| || | || Sbjct: 86 cgatttcttctacctcgtgctgcagtggccggggtcgtactgcgacacgaagcagagctg 145 Query: 147 ctgcttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaa 206 ||||| |||| ||||||| |||||| |||||||||| ||||||||||| |||||||| Sbjct: 146 ctgctacccgcggtccggcaaaccggcggcggacttcgggatccacgggctgtggcccaa 205 Query: 207 c 207 | Sbjct: 206 c 206 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 394 ttctggacccacgagtgggagaagcacggcacctgc 429 |||||| | ||||||||||||||||||||||||||| Sbjct: 339 ttctgggcgcacgagtgggagaagcacggcacctgc 374
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 21043637 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 21043696 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 21043697 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 21043753 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 21044846 gttctgggcgcacgagtgggagaagcacggcacctgc 21044882
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 109812 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 109871 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 109872 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 109928 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 111021 gttctgggcgcacgagtgggagaagcacggcacctgc 111057
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 389 tcgagttctggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacg 448 |||||||||||| || ||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 151276 tcgagttctggagcctcgagtggaagaagcacggcacctgctccaacctcggccagcacg 151335 Query: 449 gctacttcg 457 |||||||| Sbjct: 151336 cctacttcg 151344 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 397 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 456 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 122969 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 123028 Query: 457 gc 458 || Sbjct: 123029 gc 123030 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 486 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 531 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 123064 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 123109
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 14847 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 14906 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 14907 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 14963 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 16056 gttctgggcgcacgagtgggagaagcacggcacctgc 16092
>dbj|AK059802.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G01, full insert sequence Length = 1021 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 171 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 230 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 231 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 287 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 419 gttctgggcgcacgagtgggagaagcacggcacctgc 455
>dbj|AB052842.1| Oryza sativa mRNA for ribonuclease, complete cds Length = 1154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 152 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 211 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 212 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 268 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 400 gttctgggcgcacgagtgggagaagcacggcacctgc 436
>dbj|AB052844.1| Oryza sativa (japonica cultivar-group) mRNA for ribonuclease, partial cds, clone:E11124 Length = 739 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 170 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 229 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 230 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 286 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 418 gttctgggcgcacgagtgggagaagcacggcacctgc 454
>dbj|AB052843.1| Oryza sativa (japonica cultivar-group) mRNA for ribonuclease, complete cds, clone:C30227 Length = 1005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 99/117 (84%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 144 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 203 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 204 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctctggcccaac 260 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 392 gttctgggcgcacgagtgggagaagcacggcacctgc 428
>gb|AY107950.1| Zea mays PCO076023 mRNA sequence Length = 1046 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 74 cggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgaca 133 ||||| |||| | ||| ||||||||||| |||| ||| ||||| ||| ||| ||| |||| Sbjct: 267 cggcgcaggactacgacttcttctacctcgtgctgcagtggccgggggcctactgcgaca 326 Query: 134 cgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacg 193 | ||| || | ||||||| ||| | |||||||||||||| |||||||||| ||||||| Sbjct: 327 ccaagcagagctgctgctaccccaagtccggcaagccggcggcggacttcgggatccacg 386 Query: 194 ggctctggcccaac 207 | |||||||||||| Sbjct: 387 gcctctggcccaac 400 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 402 ccacgagtgggagaagcacggcacctgc 429 |||||||||||||||||||||||||||| Sbjct: 541 ccacgagtgggagaagcacggcacctgc 568 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 cgccaactggccgacgctggcgtgc 372 |||||| |||||||||||||||||| Sbjct: 487 cgccaagtggccgacgctggcgtgc 511
>dbj|AK058502.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F07, full insert sequence Length = 1178 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||| ||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 172 ttcttcttcctggtgctgcagtggcccgggtcgtactgcgacacgaagcagagctgctgc 231 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | |||||||||||||| | ||||||||||||||||| ||| |||||||| Sbjct: 232 tacccgcgctccggcaagccggcggccgacttcggcatccacggcctccggcccaac 288 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 393 gttctggacccacgagtgggagaagcacggcacctgc 429 ||||||| | ||||||||||||||||||||||||||| Sbjct: 420 gttctgggcgcacgagtgggagaagcacggcacctgc 456
>gb|AF000940.1|AF000940 Hordeum vulgare ribonuclease gene, complete cds Length = 1583 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 112 tggccagggtccttctgtgacacgaagaaggggtgctgcttcccggacaccggcaagccg 171 ||||| ||||| | ||| |||||||||||| | ||||||| |||| || || |||||| Sbjct: 528 tggccggggtcgtactgcgacacgaagaagagctgctgctacccgcggacggggaagccg 587 Query: 172 gcgacggacttcggcatccacgggctctggcccaac 207 ||| |||||||||| ||||||||||||||||||||| Sbjct: 588 gcggcggacttcgggatccacgggctctggcccaac 623 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 392 agttctggacccacgagtgggagaagcacggcacctgc 429 |||||||| | ||||||||||||||||||||||||||| Sbjct: 1213 agttctgggcgcacgagtgggagaagcacggcacctgc 1250
>gb|BT019161.1| Zea mays clone Contig826.F mRNA sequence Length = 946 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 74 cggcggaggaattcgatttcttctaccttgtgcagcaatggccagggtccttctgtgaca 133 ||||| |||| | ||| ||||||||||| |||| ||| ||||| ||| ||| ||| |||| Sbjct: 782 cggcgcaggactacgacttcttctacctcgtgctgcagtggccgggggcctactgcgaca 723 Query: 134 cgaagaaggggtgctgcttcccggacaccggcaagccggcgacggacttcggcatccacg 193 | ||| || | ||||||| ||| | |||||||||||||| |||||||| | ||||||| Sbjct: 722 ccaagcagagctgctgctaccccaagtccggcaagccggcggcggacttcaggatccacg 663 Query: 194 ggctctggcccaac 207 | |||||||||||| Sbjct: 662 gcctctggcccaac 649 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 402 ccacgagtgggagaagcacggcacctgc 429 |||||||||||||||||||||||||||| Sbjct: 508 ccacgagtgggagaagcacggcacctgc 481 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccaactggccgacgctggcgtgc 372 |||||| |||||||||||||||||| Sbjct: 562 cgccaagtggccgacgctggcgtgc 538
>gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, complete cds Length = 850 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaaggggtgctgc 150 ||||||||||| |||| ||| ||||| ||||| | ||| ||||||||| || | |||||| Sbjct: 110 ttcttctacctcgtgctgcagtggccggggtcgtactgcgacacgaagcagagctgctgc 169 Query: 151 ttcccggacaccggcaagccggcgacggacttcggcatccacgggctctggcccaac 207 | |||| | || ||||||||| |||||||||| |||||||| |||||||||||| Sbjct: 170 tacccgcggtcggggaagccggcggcggacttcgggatccacggcctctggcccaac 226 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 392 agttctggacccacgagtgggagaagcacggcacctgc 429 |||||||| | ||||||||||||||||||||||||||| Sbjct: 357 agttctgggcgcacgagtgggagaagcacggcacctgc 394
>ref|NM_193068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 397 tggacccacgagtgggagaagcacggcacctgctccaacctggaccagcacggctacttc 456 |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 340 tggagccacgagtggagcaagcacggcacctgctccaacctcagccagcacggctacttc 399 Query: 457 gc 458 || Sbjct: 400 gc 401 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Plus Query: 486 caacctcaccagcatcctcgccgacgccgggatcgtgccgtccgac 531 |||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 435 caaccttaccaagatcctcgccgacggcggcgtcgtgccgtccgac 480
>gb|AF202030.1|AF202030 Prunus dulcis RNase PD2 (Pd2) mRNA, complete cds Length = 790 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 88 gatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaagaa 140 |||||||||||| |||| ||||| ||||||||||| | ||||||||| ||||| Sbjct: 79 gatttcttctactttgtccagcagtggccagggtcatactgtgacacaaagaa 131 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 gagttctggacccacgagtgggagaagcacggcacctgctc 431 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 328 gagttctggacacatgaatgggaaaagcatggcacctgctc 368
>ref|XM_850178.1| PREDICTED: Canis familiaris similar to Ribonuclease T2 precursor (Ribonuclease 6) (LOC612451), mRNA Length = 663 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 394 ttctggacccacgagtgggagaagcacggcacctg 428 ||||||| |||||||||||||||||||||||||| Sbjct: 202 ttctggaagcacgagtgggagaagcacggcacctg 236
>gb|U19924.1|ZEU19924 Zinnia elegans wounding-induced ribonuclease mRNA, complete cds Length = 802 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 85 ttcgatttcttctaccttgtgcagcaatggccagggtccttctgtgacacgaa 137 |||||||| ||||||||||| || |||||||| || || | |||||||||||| Sbjct: 108 ttcgattttttctaccttgttcaacaatggccgggatcatactgtgacacgaa 160
>ref|XM_502205.1| Yarrowia lipolytica CLIB122, YALI0C23991g predicted mRNA Length = 1221 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 394 ttctggacccacgagtgggagaagcacggcacctgc 429 |||||||||||||||||| | ||||||| ||||||| Sbjct: 436 ttctggacccacgagtggaacaagcacgccacctgc 471
>dbj|AB243410.1| Bradyrhizobium japonicum DNA, mini-Tn5-flanking sequence, strain: mutant 1C2 Length = 2941 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 acgagtgggagaagcacggcacctgctc 431 |||||||||| ||||||||||||||||| Sbjct: 1053 acgagtgggacaagcacggcacctgctc 1080
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 acgagtgggagaagcacggcacctgctc 431 |||||||||| ||||||||||||||||| Sbjct: 8202107 acgagtgggacaagcacggcacctgctc 8202134
>gb|U19923.1|ZEU19923 Zinnia elegans ribonuclease mRNA, complete cds Length = 817 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 85 ttcgatttcttctaccttgtgcagcaatggccagggtccttctgtgac 132 ||||||||||||||| |||| || || ||||||||||| | ||||||| Sbjct: 106 ttcgatttcttctactttgttcaacagtggccagggtcatactgtgac 153
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 394 ttctggacccacgagtgggagaagcacggcacctgc 429 |||||||||||||||||| | ||||||| ||||||| Sbjct: 3214934 ttctggacccacgagtggaacaagcacgccacctgc 3214969
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 162 cggcaagccggcgacggacttcg 184 ||||||||||||||||||||||| Sbjct: 379773 cggcaagccggcgacggacttcg 379795
>gb|AF043516.1|AF043516 Syncephalastrum racemosum RNase Sy (RNASESR) mRNA, partial cds Length = 795 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 390 cgagttctggacccacgagtgggagaagcacggcacctg 428 ||||||||||||||| |||||| | ||||| |||||||| Sbjct: 303 cgagttctggacccatgagtggaacaagcatggcacctg 341
>emb|X67054.1|AHRIBN A.hydrophila gene for ribonuclease Length = 1073 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 406 gagtgggagaagcacggcacctg 428 ||||||||||||||||||||||| Sbjct: 447 gagtgggagaagcacggcacctg 469
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 514 gggatcgtgccgtccgacaccga 536 ||||||||||||||||||||||| Sbjct: 4644288 gggatcgtgccgtccgacaccga 4644310
>gb|AC167971.3| Mus musculus BAC clone RP24-439I22 from chromosome 7, complete sequence Length = 198057 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 aggaattcgatttcttctaccttgtg 105 ||||||| |||||||||||||||||| Sbjct: 184934 aggaattggatttcttctaccttgtg 184959
>ref|XM_597536.2| PREDICTED: Bos taurus similar to transcription factor-like nuclear regulator (LOC519320), mRNA Length = 4251 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 540 ctacttcctcagcagcatcagg 561 |||||||||||||||||||||| Sbjct: 3748 ctacttcctcagcagcatcagg 3727
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 407 agtgggagaagcacggcacctgctcc 432 ||||||| |||||||||||||||||| Sbjct: 2749654 agtgggacaagcacggcacctgctcc 2749629
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 404 acgagtgggagaagcacggcacctgc 429 |||||||||| ||||||||||||||| Sbjct: 4492830 acgagtgggacaagcacggcacctgc 4492805
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 404 acgagtgggagaagcacggcacctgc 429 |||||||||| ||||||||||||||| Sbjct: 46301 acgagtgggacaagcacggcacctgc 46276
>gb|AC158186.2| Selaginella moellendorffii clone JGIASXY-5F17, complete sequence Length = 30844 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 394 ttctggacccacgagtgggagaagcacggcacctgctc 431 |||||| | |||||||||||||||||||| || ||||| Sbjct: 12388 ttctgggcgcacgagtgggagaagcacgggacgtgctc 12425
>gb|AC138657.1| Homo sapiens BAC clone RP11-141I1 from 4, complete sequence Length = 119794 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 ttcttctaccttgtgcagcaat 112 |||||||||||||||||||||| Sbjct: 116907 ttcttctaccttgtgcagcaat 116928
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 ccttctgtgacacgaagaaggg 143 |||||||||||||||||||||| Sbjct: 649278 ccttctgtgacacgaagaaggg 649257
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence Length = 207333 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 aggaattcgatttcttctaccttgtg 105 ||||||| |||||||||||||||||| Sbjct: 49360 aggaattggatttcttctaccttgtg 49385
>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence Length = 182190 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 117144 tcagggacctggtgagggagctgga 117168
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 457 gcgacggcgctcggcttcaaggccc 481 |||||||||||||||||||| |||| Sbjct: 2632939 gcgacggcgctcggcttcaacgccc 2632963
>gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, complete sequence Length = 229752 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 138 gaaggggtgctgcttcccggacacc 162 ||||||||||||||||| ||||||| Sbjct: 48312 gaaggggtgctgcttcctggacacc 48288
>gb|BC027353.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone MGC:28195 IMAGE:3988926), complete cds Length = 2763 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 969 tcagggacctggtgagggagctgga 993
>gb|BC006699.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone IMAGE:3498575), partial cds Length = 2582 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 785 tcagggacctggtgagggagctgga 809
>emb|AL109622.10|HSDJ526F5 Human DNA sequence from clone RP3-526F5 on chromosome Xq26.3-28 Contains the 3' end of a novel gene and the gene for a novel protein similar to ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) (UBE2N), complete sequence Length = 122900 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 cgccacaacctcaccagcatc 501 ||||||||||||||||||||| Sbjct: 47683 cgccacaacctcaccagcatc 47703
>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence Length = 204620 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 10500 tcagggacctggtgagggagctgga 10524
>gb|DQ378284.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmids 23A13 and 15G13, complete sequence Length = 54154 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 297 cagcgagcgcctcaagctctgggaaatca 325 |||||||||||| |||| ||||||||||| Sbjct: 5683 cagcgagcgcctaaagccctgggaaatca 5655
>gb|AC074325.7| Homo sapiens chromosome 10 clone RP11-542E6, complete sequence Length = 158587 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ggagatggtgaccaggcggag 269 ||||||||||||||||||||| Sbjct: 46024 ggagatggtgaccaggcggag 46044
>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 72022 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 cttcctcagcagcatcaggga 563 ||||||||||||||||||||| Sbjct: 49749 cttcctcagcagcatcaggga 49769
>dbj|AK013219.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810431N19 product:ATAXIA-TELANGIECTASIA GROUP D-ASSOCIATED PROTEIN (TRIPARTITE MOTIF PROTEIN TRIM29 ALPHA) homolog [Homo sapiens], full insert sequence Length = 1870 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 105 tcagggacctggtgagggagctgga 129
>dbj|AK028448.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631408J18 product:tripartite motif protein 29, full insert sequence Length = 2063 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 287 tcagggacctggtgagggagctgga 311
>gb|AF157011.1|AF157011 Prunus dulcis strain Tuono S-like ribonuclease gene, partial cds Length = 1307 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 391 gagttctggacccacgagtgggagaagcacggcacctgctc 431 ||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 860 gagttctggacacatgaatgggaaaagcatggcacctgctc 900
>ref|XM_310475.2| Anopheles gambiae str. PEST ENSANGP00000019220 (ENSANGG00000016731), mRNA Length = 720 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ggcggaggaagaagtgctggc 283 ||||||||||||||||||||| Sbjct: 458 ggcggaggaagaagtgctggc 478
>emb|CT737237.2| Pan troglodytes chromosome X clone CH251-44N04 map Xq28, complete sequence Length = 148267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 cgccacaacctcaccagcatc 501 ||||||||||||||||||||| Sbjct: 42577 cgccacaacctcaccagcatc 42597
>ref|NM_023655.1| Mus musculus tripartite motif protein 29 (Trim29), mRNA Length = 2063 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 tcagggacctggtgacggagctgga 347 ||||||||||||||| ||||||||| Sbjct: 287 tcagggacctggtgagggagctgga 311
>ref|NM_190089.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3132 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tcaccagcatcctcgccgac 510 |||||||||||||||||||| Sbjct: 970 tcaccagcatcctcgccgac 951
>ref|XM_478900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 279 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tcgcgacggcgctcggcttc 474 |||||||||||||||||||| Sbjct: 223 tcgcgacggcgctcggcttc 204
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 cagcatcctcgccgacgccg 514 |||||||||||||||||||| Sbjct: 3955545 cagcatcctcgccgacgccg 3955526
>gb|BC072194.1| Xenopus laevis hypothetical protein MGC81051, mRNA (cDNA clone MGC:81051 IMAGE:6316269), complete cds Length = 2431 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gcggaggaattcgatttctt 95 |||||||||||||||||||| Sbjct: 1365 gcggaggaattcgatttctt 1346
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 acggcacctgctccaacctg 438 |||||||||||||||||||| Sbjct: 3186757 acggcacctgctccaacctg 3186738
>gb|AY658564.1| Synthetic construct Peudomonas aeruginosa clone FLH035264.01F PA3483 gene, partial cds Length = 801 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctgcaacagcgagcgcctc 309 |||||||||||||||||||| Sbjct: 203 cctgcaacagcgagcgcctc 222
>gb|AC092143.4| Homo sapiens chromosome 16 clone RP11-566K11, complete sequence Length = 146534 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gagaagcacggcacctgctc 431 |||||||||||||||||||| Sbjct: 109683 gagaagcacggcacctgctc 109664
>gb|AC121997.3| Mus musculus BAC clone RP24-312G4 from chromosome 14, complete sequence Length = 143266 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tttcttctaccttgtgcagc 109 |||||||||||||||||||| Sbjct: 12202 tttcttctaccttgtgcagc 12183
>ref|XM_814667.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506825.190) partial mRNA Length = 1368 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ccagcatcctcgccgacgcc 513 |||||||||||||||||||| Sbjct: 674 ccagcatcctcgccgacgcc 655
>ref|XM_815876.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508175.90) partial mRNA Length = 1554 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ccagcatcctcgccgacgcc 513 |||||||||||||||||||| Sbjct: 860 ccagcatcctcgccgacgcc 841
>gb|AC011287.4| Homo sapiens BAC clone RP11-22K15 from 7, complete sequence Length = 132943 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 77170 ccacaacctcaccagcatcc 77151
>emb|AL590782.8| Human DNA sequence from clone CTD-2524E3 on chromosome Xq25, complete sequence Length = 84176 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 4721 ccacaacctcaccagcatcc 4702
>emb|AL451042.10| Human DNA sequence from clone RP11-276H7 on chromosome 1 Contains the EPHA2 gene for EphA2, two novel genes and two CpG islands, complete sequence Length = 88098 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 accaggcggaggaagaagtg 278 |||||||||||||||||||| Sbjct: 10846 accaggcggaggaagaagtg 10827
>emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chromosome 9 Contains the 3' end of the gene for a novel protein (DKFZp761J1523), the SLC2A8 gene for solute carrier family 2, (facilitated glucose transporter) member 8 (glucose transporter X1)(GLUT8, GLUTX1), the ZNF79 gene for zinc finger protein 79 (pT7), the RPL12 gene for ribosomal protein L12 (60S ribosomal protein L12), the gene for a novel protein, the gene for a novel protein (DKFZP434H0820)(FLJ13518, FLJ22151, FLJ22298) and four Cpg islands, complete sequence Length = 225370 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gcctcaagctctgggaaatcaggg 328 |||||||||||||||||| ||||| Sbjct: 110619 gcctcaagctctgggaaagcaggg 110642
>emb|AL391134.13| Human DNA sequence from clone RP11-245M24 on chromosome Xp11.22-11.3 Contains the 3' end of a nove gene and a keratin 8 (K8, KO, CK8, CYK8, K2C8, CARD2) (KRT8) pseudogene, complete sequence Length = 58094 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 8184 ccacaacctcaccagcatcc 8203
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 cgtgccgtccgacaccgaga 538 |||||||||||||||||||| Sbjct: 1685579 cgtgccgtccgacaccgaga 1685560
>gb|AC120035.6| Homo sapiens chromosome 8, clone RP11-1116K10, complete sequence Length = 151045 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 31017 ccacaacctcaccagcatcc 31036
>emb|AL136230.9| Human DNA sequence from clone RP1-95I21 on chromosome 6, complete sequence Length = 120515 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 48137 ccacaacctcaccagcatcc 48118
>emb|AL133271.22| Human DNA sequence from clone RP11-155N17 on chromosome Xq22.1-23, complete sequence Length = 71998 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 15884 ccacaacctcaccagcatcc 15865
>emb|X93592.1|DBCA1 D.bioculata mRNA for CA1 protein Length = 3692 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 gcgacggcgctcggcttcaa 476 |||||||||||||||||||| Sbjct: 2502 gcgacggcgctcggcttcaa 2521
>gb|AE008830.1| Salmonella typhimurium LT2, section 134 of 220 of the complete genome Length = 20890 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 acgccaactggccgacgctg 366 |||||||||||||||||||| Sbjct: 4069 acgccaactggccgacgctg 4050
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 cgtgccgtccgacaccgaga 538 |||||||||||||||||||| Sbjct: 152972 cgtgccgtccgacaccgaga 152991
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 cgtgccgtccgacaccgaga 538 |||||||||||||||||||| Sbjct: 82149 cgtgccgtccgacaccgaga 82130
>emb|BX511059.10| Zebrafish DNA sequence from clone CH211-253P10 in linkage group 14, complete sequence Length = 107605 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 atttcttctaccttgtgcagcaat 112 ||||||||||||||||| |||||| Sbjct: 92572 atttcttctaccttgtggagcaat 92595
>gb|AE014178.1| Mus musculus piebald deletion region section 6 of 11 of the complete sequence Length = 400029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 tttcttctaccttgtgcagc 109 |||||||||||||||||||| Sbjct: 169861 tttcttctaccttgtgcagc 169842
>gb|AC015722.6| Homo sapiens chromosome 15, clone RP11-167B3, complete sequence Length = 164964 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 acggcacctgctccaacctg 438 |||||||||||||||||||| Sbjct: 25404 acggcacctgctccaacctg 25423
>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence Length = 127953 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 78557 ccacaacctcaccagcatcc 78576
>gb|AC093267.2| Homo sapiens chromosome 5 clone RP11-280F11, complete sequence Length = 170999 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 17716 ccacaacctcaccagcatcc 17735
>gb|AC004659.1|AC004659 Homo sapiens chromosome 19, CIT-HSP-87m17 BAC clone, complete sequence Length = 129577 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 31564 ccacaacctcaccagcatcc 31583
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tcaccagcatcctcgccgac 510 |||||||||||||||||||| Sbjct: 41216055 tcaccagcatcctcgccgac 41216036
>gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, complete sequence Length = 210446 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gagaagcacggcacctgctc 431 |||||||||||||||||||| Sbjct: 7056 gagaagcacggcacctgctc 7037
>gb|AC093722.2| Homo sapiens BAC clone CTD-2012I17 from 4, complete sequence Length = 163353 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 53215 ccacaacctcaccagcatcc 53196
>gb|AY466441.1| Saccharopolyspora spinosa NRLL 18395 obscurin polyketide synthase gene locus, complete sequence Length = 108584 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 ccgcggcgagctcgacggcgcctt 248 |||||||||| ||||||||||||| Sbjct: 85899 ccgcggcgaggtcgacggcgcctt 85876
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tcaccagcatcctcgccgac 510 |||||||||||||||||||| Sbjct: 32970 tcaccagcatcctcgccgac 32951
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tcaccagcatcctcgccgac 510 |||||||||||||||||||| Sbjct: 113110 tcaccagcatcctcgccgac 113091
>gb|AE004769.1| Pseudomonas aeruginosa PAO1, section 330 of 529 of the complete genome Length = 13017 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctgcaacagcgagcgcctc 309 |||||||||||||||||||| Sbjct: 4404 cctgcaacagcgagcgcctc 4423
>gb|AC129915.6| Homo sapiens chromosome 8, clone CTD-3212A4, complete sequence Length = 162359 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 132963 ccacaacctcaccagcatcc 132982
>gb|AC124802.11| Homo sapiens chromosome 17, clone RP11-278N14, complete sequence Length = 62029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 24387 ccacaacctcaccagcatcc 24406
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 acgccaactggccgacgctg 366 |||||||||||||||||||| Sbjct: 2809518 acgccaactggccgacgctg 2809499
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tcgcgacggcgctcggcttc 474 |||||||||||||||||||| Sbjct: 3823 tcgcgacggcgctcggcttc 3804
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tcgcgacggcgctcggcttc 474 |||||||||||||||||||| Sbjct: 111775 tcgcgacggcgctcggcttc 111756
>dbj|AK070064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B03, full insert sequence Length = 3785 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 tcaccagcatcctcgccgac 510 |||||||||||||||||||| Sbjct: 1303 tcaccagcatcctcgccgac 1284
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 caactggccgacgctggcgt 370 |||||||||||||||||||| Sbjct: 1563965 caactggccgacgctggcgt 1563984
>dbj|AP003729.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-126A9, complete sequence Length = 49870 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 18287 ccacaacctcaccagcatcc 18306
>emb|AL117692.5|CNS01DRP Human chromosome 14 DNA sequence BAC R-58E21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168874 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aggcggaggaagaagtgctg 281 |||||||||||||||||||| Sbjct: 95923 aggcggaggaagaagtgctg 95904
>gb|DQ289495.1| Synthetic construct EpoE (epoE) gene, complete cds Length = 11460 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 161 ccggcaagccggcgacggacttcggcat 188 |||||||||||||||| |||| |||||| Sbjct: 10142 ccggcaagccggcgaccgactgcggcat 10169
>dbj|AP003123.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-402K1, complete sequence Length = 187735 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ccacaacctcaccagcatcc 502 |||||||||||||||||||| Sbjct: 8828 ccacaacctcaccagcatcc 8847 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,033,089 Number of Sequences: 3902068 Number of extensions: 4033089 Number of successful extensions: 101983 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100592 Number of HSP's gapped (non-prelim): 1389 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)