ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart33a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GIT2_HUMAN (Q14161) ARF GTPase-activating protein GIT2 (G protei... 30 2.8

>GIT2_HUMAN (Q14161) ARF GTPase-activating protein GIT2 (G protein-coupled|
           receptor kinase-interactor 2) (GRK-interacting protein
           2) (Cool-interacting tyrosine-phosphorylated protein 2)
           (CAT2) (CAT-2)
          Length = 759

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 193 CCPSRRSLGRHWSLQTXXXXXXXXGHMKPTPWTP 92
           CC   RSLGRH S            H+K TPW P
Sbjct: 34  CCSVHRSLGRHIS---------QVRHLKHTPWPP 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,053,544
Number of Sequences: 219361
Number of extensions: 324352
Number of successful extensions: 836
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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