ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33a12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 95 cgtccaaggtgtcggcttcatgtggcctcttcctcgcccttaacctcctc 144 |||||| || ||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 67318 cgtccagggcgtcggcttcctgtgccctcttcctcgccctcaacctcctc 67269
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 95 cgtccaaggtgtcggcttcatgtggcctcttcctcgcccttaacctcctc 144 |||||| || ||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 21267041 cgtccagggcgtcggcttcctgtgccctcttcctcgccctcaacctcctc 21267090
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 95 cgtccaaggtgtcggcttcatgtggcctcttcctcgcccttaacctcctc 144 |||||| || ||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 104 cgtccagggcgtcggcttcctgtgccctcttcctcgccctcaacctcctc 153
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 95 cgtccaaggtgtcggcttcatgtggcctcttcctcgcccttaacctcctc 144 |||||| || ||||||||| |||| ||||||||||||||| ||||||||| Sbjct: 21278305 cgtccagggcgtcggcttcctgtgccctcttcctcgccctcaacctcctc 21278354
>gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b, G6d, G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3, BAT2, AIF-1, 1C7, LST-1, LTB, TNF, and LTA genes, complete cds Length = 184666 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| ||||||||| Sbjct: 129171 gggagaggtggtggcggtggcggtggcggcggcggcg 129135
>emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chromosome 6, complete sequence Length = 69009 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| ||||||||| Sbjct: 452 gggagaggtggtggcggtggcggtggcggcggcggcg 488
>emb|BX248305.13| Human DNA sequence from clone DASS-82G15 on chromosome 6 Contains the UQCRHP1 pseudogene for ubiquinol-cytochrome c reductase hinge protein pseudogene 1, AIF1 gene for allograft inflammatory factor 1, the 5' end of the BAT2 gene for HLA-B associated transcript 2, and 1 CpG island, complete sequence Length = 16685 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| ||||||||| Sbjct: 15137 gggagaggtggtggcggtggcggtggcggcggcggcg 15173
>emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chromosome 6 Contains the AIF1 gene for allograft inflammatory factor 1, the BAT2 genes for HLA-B associated transcript 2, the BAT3 gene for HLA-B associated transcript 3, the APOM gene for apolipoprotein M, the C6orf47 gene for chromosome 6 open reading frame 47, the BAT4 gene for HLA-B associated transcript 4, the CSNK2B gene for casein kinase 2, beta polypeptide, the LY6G5B gene for lymphocyte antigen 6 complex, locus G5B, the bQB195H10.12 gene for a novel protein, the LY6G5C gene for lymphocyte antigen 6 complex, locus G5C, the BAT5 gene for HLA-B associated transcript 5, the 5' end for LY6G6D gene for lymphocyte antigen 6 complex, locus G6D and 7 CpG islands, complete sequence Length = 99109 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| ||||||||| Sbjct: 9377 gggagaggtggtggcggtggcggtggcggcggcggcg 9413
>emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on chromosome 6 contains a ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha, the TNF gene for tumour necrosis factor, the LTB gene for lymphotoxin beta, the LST1 gene for leukocyte specific transcript 1, the LY117 gene for lymphocyte antigen 117, the AIF1 gene for alograft imflammatory factor 1, the BAT2 gene for HLA-B associated transcript 2, the BAT3 gene for HLA-B associated transcript 3, the APOM gene for apolipoprotein M, the 3' end of the gene for chromosome 6, open reading frame 47 and four CpG islands, complete sequence Length = 132330 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| ||||||||| Sbjct: 93572 gggagaggtggtggcggtggcggtggcggcggcggcg 93608
>emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chromosome 6 contains the gene for a novel protein similar to similar to peptidyl-prolyl cis-trans isomerase A (PPIase), a ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha, the TNF gene for tumour necrosis factor, the LTB gene for lymphotoxin beta, the LST1 gene for leukocyte specific transcript 1, the LY117 gene for lymphocyte antigen 117, the AIF1 gene for alograft imflammatory factor 1, the BAT2 gene for HLA-B associated transcript 2, the 3' end of the BAT3 gene for HLA-B associated transcript 3 and two CpG islands, complete sequence Length = 135784 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| ||||||||| Sbjct: 107339 gggagaggtggtggcggtggcggtggcggcggcggcg 107375
>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence Length = 156244 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 141785 gagaggtggtggcggtggaagtgg 141762
>ref|NM_016805.1| Mus musculus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA Length = 2600 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2292 gagaggtggtggcggtggaagtgg 2315
>dbj|AK145499.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0007J20 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3406 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2358 gagaggtggtggcggtggaagtgg 2381
>dbj|AK159084.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420001B22 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2901 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2324 gagaggtggtggcggtggaagtgg 2347
>dbj|AK145682.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029C11 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3404 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2358 gagaggtggtggcggtggaagtgg 2381
>dbj|AK159956.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420039N16 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3348 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2297 gagaggtggtggcggtggaagtgg 2320
>dbj|AK168657.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920041N14 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3341 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2297 gagaggtggtggcggtggaagtgg 2320
>dbj|AK159614.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025L06 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3404 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2360 gagaggtggtggcggtggaagtgg 2383
>dbj|AK167200.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0038M11 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3404 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2358 gagaggtggtggcggtggaagtgg 2381
>dbj|AK165844.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730006M20 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 3670 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2355 gagaggtggtggcggtggaagtgg 2378
>dbj|AK089058.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430038A15 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2934 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2356 gagaggtggtggcggtggaagtgg 2379
>dbj|AK037517.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130023B09 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2594 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2298 gagaggtggtggcggtggaagtgg 2321
>dbj|AK029944.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932409F19 product:heterogeneous nuclear ribonucleoprotein U, full insert sequence Length = 2848 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2302 gagaggtggtggcggtggaagtgg 2325
>gb|BC018353.1| Mus musculus heterogeneous nuclear ribonucleoprotein U, mRNA (cDNA clone MGC:5768 IMAGE:3584692), complete cds Length = 3272 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2200 gagaggtggtggcggtggaagtgg 2223
>gb|AF073992.1|AF073992 Mus musculus heterogenous nuclear ribonucleoprotein U (hnRNP U) mRNA, complete cds Length = 2600 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 |||||||||||||||||||||||| Sbjct: 2292 gagaggtggtggcggtggaagtgg 2315
>gb|BC070422.1| Mus musculus signal recognition particle 68, mRNA (cDNA clone MGC:95680 IMAGE:6403747), complete cds Length = 2546 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 gtggtggcggtggaagtggcagcggcggcg 256 ||||||| |||||||| ||||||||||||| Sbjct: 146 gtggtggtggtggaagcggcagcggcggcg 175
>ref|NM_146032.3| Mus musculus signal recognition particle 68 (Srp68), mRNA Length = 2546 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 gtggtggcggtggaagtggcagcggcggcg 256 ||||||| |||||||| ||||||||||||| Sbjct: 146 gtggtggtggtggaagcggcagcggcggcg 175
>emb|Z75543.1|CEK01D12 Caenorhabditis elegans Cosmid K01D12, complete sequence Length = 36974 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 gaggtggtggcggtggaagtgg 245 |||||||||||||||||||||| Sbjct: 26672 gaggtggtggcggtggaagtgg 26693
>dbj|AK033010.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820401F19 product:SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN (SRP68) homolog [Canis familiaris], full insert sequence Length = 2442 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 227 gtggtggcggtggaagtggcagcggcggcg 256 ||||||| |||||||| ||||||||||||| Sbjct: 65 gtggtggtggtggaagcggcagcggcggcg 94
>ref|NM_073706.2| Caenorhabditis elegans K01D12.8 (K01D12.8) mRNA, complete cds Length = 420 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 gaggtggtggcggtggaagtgg 245 |||||||||||||||||||||| Sbjct: 242 gaggtggtggcggtggaagtgg 263
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 agcggtggcgggatcattggcggcgg 365 ||||||||||||| |||||||||||| Sbjct: 23421948 agcggtggcgggagcattggcggcgg 23421973
>emb|AJ893562.1| Amblysomus hottentotus partial ar gene for androgen receptor, exon 1 Length = 1419 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggca 247 |||||||||||||||||||||| Sbjct: 1279 ggtggtggcggtggaagtggca 1300
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 ggtggcggtggaagtggcagcggcgg 254 |||||||||||||||||| ||||||| Sbjct: 1367635 ggtggcggtggaagtggcggcggcgg 1367660
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 agcggtggcgggatcattggcggcgg 365 ||||||||||||| |||||||||||| Sbjct: 23350139 agcggtggcgggagcattggcggcgg 23350164
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 agcggtggcgggatcattggcggcgg 365 ||||||||||||| |||||||||||| Sbjct: 80211 agcggtggcgggagcattggcggcgg 80186
>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete sequence Length = 212385 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 227 gtggtggcggtggaagtggcagcggcggcg 256 ||||||| |||||||| ||||||||||||| Sbjct: 22067 gtggtggtggtggaagcggcagcggcggcg 22038
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 tggtggccacgggagcagagg 215 ||||||||||||||||||||| Sbjct: 648614 tggtggccacgggagcagagg 648594
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 378 gatcatcggcggcggtccaggcggt 402 |||||||||||||||||| |||||| Sbjct: 3950925 gatcatcggcggcggtcctggcggt 3950949 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 gatcattggcggcggtcctggcggt 375 |||||| |||||||||||||||||| Sbjct: 3950925 gatcatcggcggcggtcctggcggt 3950949
>ref|XM_426950.1| PREDICTED: Gallus gallus similar to zinc finger protein 499 (LOC429393), partial mRNA Length = 933 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tggcggcggtcctggcggtgg 377 ||||||||||||||||||||| Sbjct: 876 tggcggcggtcctggcggtgg 856
>ref|XM_568128.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL05960) partial mRNA Length = 696 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 tggtggccacgggagcagagg 215 ||||||||||||||||||||| Sbjct: 73 tggtggccacgggagcagagg 53
>emb|X55162.1|DMDUNC2 D.melanogaster dunce gene, exons 1 and 2 Length = 1668 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 143 ggcggtgggagtggcagcggcggcg 167
>emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chromosome 6, complete sequence Length = 83849 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| | ||||||| Sbjct: 9369 gggagaggtggtggcggtggcggtggcggtggcggcg 9405
>emb|AL024484.2|DMC96G10 Drosophila melanogaster cosmid clone 96G10 Length = 39565 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 25883 ggcggtgggagtggcagcggcggcg 25907
>emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chromosome 6, complete sequence Length = 101422 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| | ||||||| Sbjct: 77784 gggagaggtggtggcggtggcggtggcggtggcggcg 77820
>gb|AY119147.1| Drosophila melanogaster RE53611 full insert cDNA Length = 4070 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 482 ggcggtgggagtggcagcggcggcg 506
>gb|AC105351.2| Drosophila melanogaster X BAC RP98-34B12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179795 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 127872 ggcggtgggagtggcagcggcggcg 127848
>ref|NM_166960.1| Drosophila melanogaster dunce CG32498-RB, transcript variant B (dnc), mRNA Length = 4110 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 482 ggcggtgggagtggcagcggcggcg 506
>ref|NM_166959.1| Drosophila melanogaster dunce CG32498-RO, transcript variant O (dnc), mRNA Length = 4069 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 482 ggcggtgggagtggcagcggcggcg 506
>emb|CR354443.4| Human DNA sequence from clone DAMA-236L13 on chromosome 6, complete sequence Length = 132551 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 2006 gggagaggcggtggcggtggcggtggcggcggcggcg 2042
>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete sequence Length = 182826 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| | ||||| ||||||| Sbjct: 55948 gggagaggtggtggcggtggcggcggcagtggcggcg 55984
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 205 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 244 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 18225304 gggagcagcggcggttggtagagatggtggcggtggaagtg 18225264 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| |||||| ||||||||| Sbjct: 12889972 ggtggcggtggcagtggcggcggcggcg 12889945
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 205 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 244 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 28128635 gggagcagcggcggttggtagagatggtggcggtggaagtg 28128675
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| | ||||| ||||||| Sbjct: 22123 gggagaggtggtggcggtggcggcggcagtggcggcg 22087
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtggaagtggcagcggcggcg 256 |||||||||||||||||||| ||||| | ||||||| Sbjct: 323123 gggagaggtggtggcggtggcggtggcggtggcggcg 323087
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 42.1 bits (21), Expect = 1.7 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Minus Query: 205 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 244 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 74028 gggagcagcggcggttggtagagatggtggcggtggaagtg 73988
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 42.1 bits (21), Expect = 1.7 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 205 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 244 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 126130 gggagcagcggcggttggtagagatggtggcggtggaagtg 126170
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 42.1 bits (21), Expect = 1.7 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 205 gggagcagaggcggtggg-agaggtggtggcggtggaagtg 244 |||||||| |||||| || |||| ||||||||||||||||| Sbjct: 12108 gggagcagcggcggttggtagagatggtggcggtggaagtg 12148
>gb|AE003426.3| Drosophila melanogaster chromosome X, section 10 of 74 of the complete sequence Length = 396604 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 302348 ggcggtgggagtggcagcggcggcg 302372
>emb|AL663053.12| Mouse DNA sequence from clone RP23-436M12 on chromosome 11, complete sequence Length = 203593 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gaggtggtggcggtggaagtggcag 248 |||||||||||||||| |||||||| Sbjct: 137973 gaggtggtggcggtggcagtggcag 137949
>emb|X06245.1|DMDUNC12 Drosophila melanogaster dunce gene exon 1 and 2 Length = 1861 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggcggtggaagtggcagcggcggcg 256 |||||||| |||||||||||||||| Sbjct: 264 ggcggtgggagtggcagcggcggcg 288
>gb|BC072529.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein U, mRNA (cDNA clone MGC:91534 IMAGE:7096906), complete cds Length = 3380 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 ||||||||||||||| |||||||| Sbjct: 2303 gagaggtggtggcggcggaagtgg 2326
>ref|NM_114874.2| Arabidopsis thaliana unknown protein AT3G50140 mRNA, complete cds Length = 1529 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ggtggtggcggtggaagtgg 245 |||||||||||||||||||| Sbjct: 91 ggtggtggcggtggaagtgg 72
>gb|AC166248.20| Mus musculus BAC RP23-311A8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182636 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 152862 ggtggcggtggtggtggcagcggcggcg 152889
>gb|BC103753.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:117312 IMAGE:6182358), complete cds Length = 1614 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1043 ggcggtggcagtggtggtggcggtggcggtggcagc 1078
>ref|XM_514591.1| PREDICTED: Pan troglodytes similar to autoantigen p542 (LOC458187), mRNA Length = 1127 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 571 ggcggtggcagtggtggtggcggtggcggtggcagc 606
>gb|AC144852.3| Mus musculus BAC clone RP24-341K21 from chromosome 10, complete sequence Length = 169565 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 atgtggcctcttcctcgccc 133 |||||||||||||||||||| Sbjct: 97626 atgtggcctcttcctcgccc 97607
>ref|XM_471620.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcggtggaagtggcagcggc 252 |||||||||||||||||||| Sbjct: 41 gcggtggaagtggcagcggc 60
>ref|NM_057139.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA Length = 3563 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 ||||||||||||||| |||||||| Sbjct: 2782 gagaggtggtggcggcggaagtgg 2805
>gb|AC160990.4| Mus musculus BAC clone RP23-172K2 from chromosome 12, complete sequence Length = 213387 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ggtggtggcggtggaagtggcagcggcg 253 ||||||||| |||| ||||||||||||| Sbjct: 15214 ggtggtggcagtggcagtggcagcggcg 15187
>gb|AC100726.7| Mus musculus chromosome 19, clone RP24-245B11, complete sequence Length = 176074 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 acaatggtggccacgggagcagag 214 |||||||||||||| ||||||||| Sbjct: 22683 acaatggtggccactggagcagag 22660
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atggcgtccaaggtgtcggc 110 |||||||||||||||||||| Sbjct: 2734437 atggcgtccaaggtgtcggc 2734418
>ref|XM_459901.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E14256g) partial mRNA Length = 1986 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cctcttgtttgcagtgacca 160 |||||||||||||||||||| Sbjct: 531 cctcttgtttgcagtgacca 512
>ref|NM_146175.2| Mus musculus zinc finger protein 282 (Zfp282), mRNA Length = 3718 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 1506 ggtggcggtggtggtggcagcggcggcg 1533
>ref|XM_709236.1| Candida albicans SC5314 putative calcineurin regulatory protein (CaO19.123), mRNA Length = 633 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtgg 245 |||||||||||||||||||| Sbjct: 238 ggtggtggcggtggaagtgg 257
>gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242055 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 227837 ggtggcggtggtggtggcagcggcggcg 227810
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggcagcggcggcg 256 ||||||||||||||| |||||||||||||| Sbjct: 14045421 ggtggtggcggtgga--tggcagcggcggcg 14045449
>ref|XM_537961.2| PREDICTED: Canis familiaris similar to Glutathione S-transferase P (GST 7-7) (Chain 7) (GST class-pi) (LOC480844), mRNA Length = 788 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||| | |||||||||||||||| Sbjct: 45 ggtggcggtagcagtggcagcggcggcg 18
>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence Length = 274853 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ggcgggtatggaggaggagg 500 |||||||||||||||||||| Sbjct: 66738 ggcgggtatggaggaggagg 66757
>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence Length = 160892 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 acaatggtggccacgggagcagag 214 |||||||||||||| ||||||||| Sbjct: 46746 acaatggtggccactggagcagag 46769
>ref|NM_207671.2| Mus musculus zinc finger protein 318 (Zfp318), transcript variant 1, mRNA Length = 6297 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gaggtggtggcggtggaagt 243 |||||||||||||||||||| Sbjct: 3905 gaggtggtggcggtggaagt 3886
>ref|XM_845999.1| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1), transcript variant 2 (LOC489729), mRNA Length = 11346 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 gaggcggtgggagaggtggtggcggtgg 239 |||| |||||| |||||||||||||||| Sbjct: 6166 gaggtggtgggggaggtggtggcggtgg 6139
>ref|XM_546849.2| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1), transcript variant 1 (LOC489729), mRNA Length = 11373 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 212 gaggcggtgggagaggtggtggcggtgg 239 |||| |||||| |||||||||||||||| Sbjct: 6193 gaggtggtgggggaggtggtggcggtgg 6166
>ref|XM_544573.2| PREDICTED: Canis familiaris similar to Probable transcription factor CST (Castor-related protein) (LOC487448), mRNA Length = 3549 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| |||||| ||||||||| Sbjct: 2322 ggtggcggtggcagtggcggcggcggcg 2295
>gb|BC025581.1| Mus musculus zinc finger protein 282, mRNA (cDNA clone MGC:36603 IMAGE:5325029), complete cds Length = 3239 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 1409 ggtggcggtggtggtggcagcggcggcg 1436
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gaggtggtggcggtggaagt 243 |||||||||||||||||||| Sbjct: 99411 gaggtggtggcggtggaagt 99430
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggcagcggcggcg 256 ||||||||||||||| |||||||||||||| Sbjct: 55100 ggtggtggcggtgga--tggcagcggcggcg 55128
>gb|BC088727.1| Homo sapiens cDNA clone IMAGE:6285074, **** WARNING: chimeric clone **** Length = 6776 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 6160 ggcggtggcagtggtggtggcggtggcggtggcagc 6195
>ref|NM_016732.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 1, mRNA Length = 1589 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1019 ggcggtggcagtggtggtggcggtggcggtggcagc 1054
>ref|NM_007367.2| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA Length = 1541 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 971 ggcggtggcagtggtggtggcggtggcggtggcagc 1006
>emb|AL031668.23|HS64K7 Human DNA sequence from clone RP1-64K7 on chromosome 20q11.21-11.23 Contains the EIF2S2 gene for eukaryotic translation initiation factor 2 subunit 2 (beta, 38kD), a novel gene, the 5' end of a novel gene, the 3' end of the RALY gene for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow), the RPS2P1 gene for ribosomal protein S2 pseudogene 1 and two CpG islands, complete sequence Length = 139378 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 60876 ggcggtggcagtggtggtggcggtggcggtggcagc 60911
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 cctcttgtttgcagtgacca 160 |||||||||||||||||||| Sbjct: 1075849 cctcttgtttgcagtgacca 1075830
>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence Length = 205771 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ggcgggtatggaggaggagg 500 |||||||||||||||||||| Sbjct: 23661 ggcgggtatggaggaggagg 23680
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 atggcgtccaaggtgtcggc 110 |||||||||||||||||||| Sbjct: 194750 atggcgtccaaggtgtcggc 194731
>emb|AL662962.3|OSJN00165 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029L02, complete sequence Length = 165786 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcggtggaagtggcagcggc 252 |||||||||||||||||||| Sbjct: 43235 gcggtggaagtggcagcggc 43254
>emb|AL132978.1|ATF3A4 Arabidopsis thaliana DNA chromosome 3, BAC clone F3A4 Length = 108158 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtgg 245 |||||||||||||||||||| Sbjct: 91792 ggtggtggcggtggaagtgg 91811
>gb|BC065633.1| Danio rerio zgc:77262, mRNA (cDNA clone MGC:77262 IMAGE:6964048), complete cds Length = 2540 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 ggcggtgggagaggtggtggcggtggaa 241 |||||||||||||| || |||||||||| Sbjct: 752 ggcggtgggagaggaggaggcggtggaa 725
>dbj|AB017437.1| Gallus gallus mRNA for avena, complete cds Length = 2265 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtgg 239 |||||||||||||||||||| Sbjct: 1251 gggagaggtggtggcggtgg 1232
>emb|BX530031.5| Zebrafish DNA sequence from clone DKEY-175M17 in linkage group 21, complete sequence Length = 160736 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaa 241 |||||||||||||| || |||||||||| Sbjct: 12258 ggcggtgggagaggaggaggcggtggaa 12285
>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174645 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 209 gcagaggcggtgggagaggtggtggcggtggaagtggcagcggc 252 |||||||| |||| ||||| ||||| |||| |||||||||||| Sbjct: 4805 gcagaggcagtggcagaggcagtggcagtggcagtggcagcggc 4848
>emb|CR626560.1| full-length cDNA clone CS0DG001YC07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 733 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 177 ggcggtggcagtggtggtggcggtggcggtggcagc 212
>emb|CR626461.1| full-length cDNA clone CS0DC024YD16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 951 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 395 ggcggtggcagtggtggtggcggtggcggtggcagc 430
>emb|CR625534.1| full-length cDNA clone CS0DF038YF22 of Fetal brain of Homo sapiens (human) Length = 1706 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1201 ggcggtggcagtggtggtggcggtggcggtggcagc 1236
>emb|CR623780.1| full-length cDNA clone CS0DC003YF16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1434 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1021 ggcggtggcagtggtggtggcggtggcggtggcagc 1056
>emb|CR622300.1| full-length cDNA clone CS0DC003YJ22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1433 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1021 ggcggtggcagtggtggtggcggtggcggtggcagc 1056
>emb|CR620280.1| full-length cDNA clone CS0DL002YO08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1020 ggcggtggcagtggtggtggcggtggcggtggcagc 1055
>emb|CR617105.1| full-length cDNA clone CS0DI075YL22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 974 ggcggtggcagtggtggtggcggtggcggtggcagc 1009
>emb|CR615528.1| full-length cDNA clone CS0DI063YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1516 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 985 ggcggtggcagtggtggtggcggtggcggtggcagc 1020
>emb|CR615132.1| full-length cDNA clone CS0DI081YO16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1553 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1022 ggcggtggcagtggtggtggcggtggcggtggcagc 1057
>emb|CR614904.1| full-length cDNA clone CS0DF007YF13 of Fetal brain of Homo sapiens (human) Length = 1574 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1048 ggcggtggcagtggtggtggcggtggcggtggcagc 1083
>emb|CR613686.1| full-length cDNA clone CS0DK010YB22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1667 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1159 ggcggtggcagtggtggtggcggtggcggtggcagc 1194
>emb|CR613485.1| full-length cDNA clone CS0DK005YP23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1266 ggcggtggcagtggtggtggcggtggcggtggcagc 1301
>emb|CR609461.1| full-length cDNA clone CS0DK006YE09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1713 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1207 ggcggtggcagtggtggtggcggtggcggtggcagc 1242
>emb|CR612346.1| full-length cDNA clone CS0DA008YF04 of Neuroblastoma of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1168 ggcggtggcagtggtggtggcggtggcggtggcagc 1203
>emb|CR611602.1| full-length cDNA clone CS0DC018YL07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1341 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 814 ggcggtggcagtggtggtggcggtggcggtggcagc 849
>emb|CR606402.1| full-length cDNA clone CS0DI064YN17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 975 ggcggtggcagtggtggtggcggtggcggtggcagc 1010
>gb|AC009373.7| Drosophila melanogaster 3L BAC RP98-22B18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167630 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 209 gcagaggcggtgggagaggtggtggcggtggaagtggcagcggc 252 |||||||| |||| ||||| ||||| |||| |||||||||||| Sbjct: 151687 gcagaggcagtggcagaggcagtggcagtggcagtggcagcggc 151730
>emb|CR604151.1| full-length cDNA clone CS0DI007YH05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1744 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1238 ggcggtggcagtggtggtggcggtggcggtggcagc 1273
>emb|CR603257.1| full-length cDNA clone CS0DB001YP12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1170 ggcggtggcagtggtggtggcggtggcggtggcagc 1205
>emb|CR600862.1| full-length cDNA clone CS0DI064YP08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 982 ggcggtggcagtggtggtggcggtggcggtggcagc 1017
>emb|CR599587.1| full-length cDNA clone CS0DI033YM20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1495 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 973 ggcggtggcagtggtggtggcggtggcggtggcagc 1008
>emb|CR599150.1| full-length cDNA clone CS0DA010YJ20 of Neuroblastoma of Homo sapiens (human) Length = 1769 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1232 ggcggtggcagtggtggtggcggtggcggtggcagc 1267
>emb|CR597090.1| full-length cDNA clone CS0DK010YO17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1548 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1022 ggcggtggcagtggtggtggcggtggcggtggcagc 1057
>emb|CR596751.1| full-length cDNA clone CS0DC028YL10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1081 ggcggtggcagtggtggtggcggtggcggtggcagc 1116
>emb|CR596021.1| full-length cDNA clone CS0DI057YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1533 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 992 ggcggtggcagtggtggtggcggtggcggtggcagc 1027
>emb|CR595464.1| full-length cDNA clone CS0DM001YD17 of Fetal liver of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1068 ggcggtggcagtggtggtggcggtggcggtggcagc 1103
>ref|NM_166695.1| Drosophila melanogaster CG32836-RA (CG32836), mRNA Length = 1148 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agaggtggtggcggtggaag 242 |||||||||||||||||||| Sbjct: 658 agaggtggtggcggtggaag 639
>gb|AE009855.1|AE009855 Pyrobaculum aerophilum strain IM2 section 110 of 201 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cctcgcccttaacctcctct 145 |||||||||||||||||||| Sbjct: 6183 cctcgcccttaacctcctct 6164
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 ggcgggtatggaggaggagg 500 |||||||||||||||||||| Sbjct: 156741 ggcgggtatggaggaggagg 156760
>dbj|AK088531.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019K09 product:ZINC FINGER PROTEIN 282 (HTLV-I U5RE BINDING PROTEIN 1) (HUB-1) homolog [Homo sapiens], full insert sequence Length = 3718 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 1506 ggtggcggtggtggtggcagcggcggcg 1533
>dbj|AK030516.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330424K19 product:ZINC FINGER PROTEIN 282 (HTLV-I U5RE BINDING PROTEIN 1) (HUB-1) homolog [Homo sapiens], full insert sequence Length = 3613 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 1415 ggtggcggtggtggtggcagcggcggcg 1442
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 gcggtggaagtggcagcggc 252 |||||||||||||||||||| Sbjct: 12749016 gcggtggaagtggcagcggc 12749035
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggcagcggcggcg 256 ||||||||||||||| |||||||||||||| Sbjct: 14040396 ggtggtggcggtgga--tggcagcggcggcg 14040424
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR08I14, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agaggtggtggcggtggaag 242 |||||||||||||||||||| Sbjct: 48172 agaggtggtggcggtggaag 48153
>dbj|AK222915.1| Homo sapiens mRNA for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow) long isoform variant, clone: HRC04171 Length = 1553 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 982 ggcggtggcagtggtggtggcggtggcggtggcagc 1017
>ref|NM_204300.1| Gallus gallus enabled homolog (Drosophila) (ENAH), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtgg 239 |||||||||||||||||||| Sbjct: 1727 gggagaggtggtggcggtgg 1708
>gb|AF227194.1| Mus musculus zinc finger protein TZF-L mRNA, complete cds Length = 6297 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gaggtggtggcggtggaagt 243 |||||||||||||||||||| Sbjct: 3905 gaggtggtggcggtggaagt 3886
>gb|AC012066.10| Homo sapiens BAC clone RP11-173H9 from 2, complete sequence Length = 188547 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggcagc 249 |||||||||||||| ||||||||| Sbjct: 95294 ggtggtggcggtggcagtggcagc 95317
>ref|XM_579596.1| PREDICTED: Rattus norvegicus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA Length = 3064 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 ||||||||||||||| |||||||| Sbjct: 2281 gagaggtggtggcggcggaagtgg 2304
>ref|NM_205654.1| Danio rerio zgc:77262 (zgc:77262), mRNA Length = 2540 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 ggcggtgggagaggtggtggcggtggaa 241 |||||||||||||| || |||||||||| Sbjct: 752 ggcggtgggagaggaggaggcggtggaa 725
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| |||||| ||||||||| Sbjct: 51956 ggtggcggtggcagtggcggcggcggcg 51929
>dbj|AK071963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078M18, full insert sequence Length = 1768 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggcagcggcggcg 256 ||||||||||||||| |||||||||||||| Sbjct: 134 ggtggtggcggtgga--tggcagcggcggcg 162
>dbj|AK066529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073L01, full insert sequence Length = 1892 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 226 ggtggtggcggtggaagtggcagcggcggcg 256 ||||||||||||||| |||||||||||||| Sbjct: 258 ggtggtggcggtgga--tggcagcggcggcg 286
>gb|BC105018.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:132678 IMAGE:8144021), complete cds Length = 1206 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 888 ggcggtggcagtggtggtggcggtggcggtggcagc 923
>gb|AF148457.1|AF148457 Homo sapiens heterogeneous nuclear ribonucleoprotein, alternate transcript (RALY) mRNA, complete cds Length = 1589 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 1019 ggcggtggcagtggtggtggcggtggcggtggcagc 1054
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 ggtggtggcggtggaagtggcagcggcg 253 ||||||||| |||| ||||||||||||| Sbjct: 36578 ggtggtggcagtggcagtggcagcggcg 36551
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 209 gcagaggcggtgggagaggtggtggcggtggaagtggcagcggc 252 |||||||| |||| ||||| ||||| |||| |||||||||||| Sbjct: 408890 gcagaggcagtggcagaggcagtggcagtggcagtggcagcggc 408933
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agaggtggtggcggtggaag 242 |||||||||||||||||||| Sbjct: 200476 agaggtggtggcggtggaag 200457
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 209 gcagaggcggtgggagaggtggtggcgg 236 ||||||||||||| ||||||||||||| Sbjct: 132889 gcagaggcggtggcggaggtggtggcgg 132916
>gb|L38696.1|HUMAUAG Homo sapiens autoantigen p542 mRNA, complete cds Length = 1422 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 214 ggcggtgggagaggtggtggcggtggaagtggcagc 249 |||||||| || |||||||||||||| |||||||| Sbjct: 852 ggcggtggcagtggtggtggcggtggcggtggcagc 887
>emb|AL731806.13| Mouse DNA sequence from clone RP23-329N12 on chromosome 9, complete sequence Length = 89170 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 ggcgggtatggaggaggagg 500 |||||||||||||||||||| Sbjct: 40684 ggcgggtatggaggaggagg 40665
>gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome 6, complete sequence Length = 184775 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 ggtggcggtggaagtggcagcggcggcg 256 ||||||||||| ||||||||||||||| Sbjct: 36887 ggtggcggtggtggtggcagcggcggcg 36860
>emb|AL513352.12| Mouse DNA sequence from clone RP23-180L12 on chromosome 15, complete sequence Length = 240977 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 aggtggtggcggtggaagtggcagcggc 252 |||||||||| |||| |||||||||||| Sbjct: 224686 aggtggtggcagtggcagtggcagcggc 224713
>dbj|AB057641.1| Gallus gallus mRNA for avEna neural variant, complete cds Length = 3297 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtgg 239 |||||||||||||||||||| Sbjct: 1727 gggagaggtggtggcggtgg 1708
>dbj|AB035523.1| Gallus gallus mRNA for avenaIII, complete cds Length = 1853 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtgg 239 |||||||||||||||||||| Sbjct: 785 gggagaggtggtggcggtgg 766
>dbj|AB035522.1| Gallus gallus mRNA for avenaII, complete cds Length = 2135 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 gggagaggtggtggcggtgg 239 |||||||||||||||||||| Sbjct: 1140 gggagaggtggtggcggtgg 1121
>dbj|D14048.1|RATSP120 Rattus norvegicus mRNA for SP120, complete cds Length = 3563 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 222 gagaggtggtggcggtggaagtgg 245 ||||||||||||||| |||||||| Sbjct: 2782 gagaggtggtggcggcggaagtgg 2805 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,116,384 Number of Sequences: 3902068 Number of extensions: 3116384 Number of successful extensions: 63349 Number of sequences better than 10.0: 156 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 62636 Number of HSP's gapped (non-prelim): 726 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
