ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart33a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... 94 1e-19
2HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... 46 3e-05
3HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... 44 1e-04
4HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... 42 4e-04
5UGGG_SCHPO (Q09140) UDP-glucose:glycoprotein glucosyltransferase... 28 7.1
6HPPD_BRARE (Q6TGZ5) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... 28 7.1

>HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 434

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 3   VTPEHARPHRMVRFNPRSDRFHTLSFHHVEFWCADAASAAG 125
           VTPEHARPHRMVRFNPRSDRFHTLSFHHVEFWCADAASAAG
Sbjct: 17  VTPEHARPHRMVRFNPRSDRFHTLSFHHVEFWCADAASAAG 57



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>HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 445

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +3

Query: 30  RMVRFNPRSDRFHTLSFHHVEFWCADAASAA 122
           + VR NP+SD+F    FHH+EFWC DA + A
Sbjct: 31  KFVRKNPKSDKFKVKRFHHIEFWCGDATNVA 61



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>HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 442

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +3

Query: 27  HRMVRFNPRSDRFHTLSFHHVEFWCADAASAA 122
           +  VR NP+SD F    FHH+EFWC DA + +
Sbjct: 29  NNFVRANPKSDHFAVKRFHHIEFWCGDATNTS 60



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>HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 436

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +3

Query: 36  VRFNPRSDRFHTLSFHHVEFWCADAASAA 122
           VR NP SD F    FHHVEFWC DA + +
Sbjct: 25  VRSNPMSDHFPVHRFHHVEFWCGDATNTS 53



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>UGGG_SCHPO (Q09140) UDP-glucose:glycoprotein glucosyltransferase precursor (EC|
            2.4.1.-) (UDP--Glc:glycoprotein glucosyltransferase)
            (UGT)
          Length = 1448

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 124  PAAEAASAHQNSTWWKESVWKRSLRGLK 41
            P  ++    +   +WK+  WK+ LRGLK
Sbjct: 1285 PMCDSREEMEGFRFWKKGYWKKFLRGLK 1312



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>HPPD_BRARE (Q6TGZ5) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)|
           (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid
           oxidase)
          Length = 397

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 51  RSDRFHTLSFHHVEFWCADAASAA 122
           + +R   L+FHH++FW  +A  AA
Sbjct: 10  KPERGKFLNFHHIKFWVGNAKQAA 33


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,356,380
Number of Sequences: 219361
Number of extensions: 128216
Number of successful extensions: 445
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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