No.
Definition
Score (bits)
E Value
1 ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA
60
8e-06
2 ref|XM_506447.1| PREDICTED Oryza sativa (japonica cultivar-group...
60
8e-06
3 ref|XM_479031.1| Oryza sativa (japonica cultivar-group), mRNA
60
8e-06
4 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
60
8e-06
5 dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D...
60
8e-06
6 dbj|AK106010.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
8e-06
7 dbj|AK068696.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
8e-06
8 dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
8e-06
9 gb|AY112347.1| Zea mays CL32321_1 mRNA sequence
60
8e-06
10 ref|XM_479032.1| Oryza sativa (japonica cultivar-group), mRNA
56
1e-04
11 ref|XM_507388.1| PREDICTED Oryza sativa (japonica cultivar-group...
56
1e-04
12 ref|XM_506448.1| PREDICTED Oryza sativa (japonica cultivar-group...
56
1e-04
13 dbj|AK106214.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
1e-04
14 dbj|AK105918.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
1e-04
15 dbj|AK070771.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
1e-04
16 gb|AC144762.3| Mus musculus BAC clone RP24-95D6 from 3, complete...
42
2.0
17 gb|BC109470.1| Danio rerio cDNA clone IMAGE:7395403, containing ...
40
7.9
18 ref|XM_479030.1| Oryza sativa (japonica cultivar-group), mRNA
40
7.9
19 gb|J00554.1|MUSIGKJC1 Mus musculus immunoglobulin kappa precurso...
40
7.9
20 gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Can...
40
7.9
21 gb|BC083410.1| Danio rerio zgc:103514, mRNA (cDNA clone MGC:1035...
40
7.9
22 gb|AF513926.1| Mus musculus strain C57BL/6 immunoglobulin kappa ...
40
7.9
23 emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IR...
40
7.9
24 gb|AC105217.4| Homo sapiens chromosome , clone RP11-384E22, comp...
40
7.9
25 gb|AE012395.1| Xanthomonas campestris pv. campestris str. ATCC 3...
40
7.9
26 dbj|AK036494.1| Mus musculus adult male bone cDNA, RIKEN full-le...
40
7.9
27 gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...
40
7.9
28 ref|NM_001006014.1| Danio rerio zgc:103514 (zgc:103514), mRNA
40
7.9
29 dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...
40
7.9
30 gb|AC153612.6| Mus musculus 6 BAC RP23-435I4 (Roswell Park Cance...
40
7.9
31 dbj|AK107490.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
7.9
32 gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple...
40
7.9
33 gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromoso...
40
7.9
34 emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on ch...
40
7.9
35 gb|M34473.1|MUSIGKABM Mouse Ig processed pseudo-kappa-chain mRNA...
40
7.9
>ref|XM_479036.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 678
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
|||||||| |||| |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct: 104 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 163
Query: 139 aggagg 144
||||||
Sbjct: 164 aggagg 169
Score = 56.0 bits (28), Expect = 1e-04
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 182 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 192 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 251
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 360 caccctgctatgcccgagctcccgaagcctga 391
|||||||| |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380
Score = 40.1 bits (20), Expect = 7.9
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 432 aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 491
|||| ||||||| ||||||||||| || |||||| |||| |||| ||| |||| |
Sbjct: 289 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 348
Query: 492 caccctgctatgcccgagcccccgaagcctga 523
|||||||| |||| |||| ||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccga 202
||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254
>ref|XM_506447.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.112
mRNA
Length = 1006
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382
Score = 54.0 bits (27), Expect = 5e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 94 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153
Query: 139 agg 141
|||
Sbjct: 154 agg 156
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccga 202
|||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 gtgccacaccccgtggtgccggag 335
||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 caccccgtcatgcccgagctgccaaagcctga 244
||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 210 ccgcaccccgtcatgcccgagctgccaaagcc 241
|||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| | || |||| ||||||||||||||||||
Sbjct: 185 gccggagcttcccaagcctgagctgccgccgcaccc 220
>ref|XM_479031.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 1005
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379
Score = 54.0 bits (27), Expect = 5e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 91 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150
Query: 139 agg 141
|||
Sbjct: 151 agg 153
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccga 202
|||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 gtgccacaccccgtggtgccggag 335
||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 caccccgtcatgcccgagctgccaaagcctga 244
||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 210 ccgcaccccgtcatgcccgagctgccaaagcc 241
|||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| | || |||| ||||||||||||||||||
Sbjct: 182 gccggagcttcccaagcctgagctgccgccgcaccc 217
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
|||||||| |||| |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct: 24428254 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 24428195
Query: 139 aggagg 144
||||||
Sbjct: 24428194 aggagg 24428189
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 24417350 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 24417293
Score = 56.0 bits (28), Expect = 1e-04
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 182 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 24428166 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 24428107
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 24419311 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 24419252
Query: 238 agcctgaa 245
||||||||
Sbjct: 24419251 agcctgaa 24419244
Score = 54.0 bits (27), Expect = 5e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 24417442 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 24417383
Query: 139 agg 141
|||
Sbjct: 24417382 agg 24417380
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 24417212 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 24417154
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 24419447 ccgccacaccccgtcgtgccggagctgccaaagcc 24419413
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 24419894 ctgctgctctcgtccagctccatgagcagcgcggcacg 24419857
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 24419348 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 24419291
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 178 tcgtcccggagctgccaaagcccga 202
|||| ||||||||||||||||||||
Sbjct: 24417175 tcgtgccggagctgccaaagcccga 24417151
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccga 202
||||||||||||||||||||
Sbjct: 24428123 ccggagctgccaaagcccga 24428104
Score = 40.1 bits (20), Expect = 7.9
Identities = 74/92 (80%)
Strand = Plus / Minus
Query: 432 aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 491
|||| ||||||| ||||||||||| || |||||| |||| |||| ||| |||| |
Sbjct: 24428069 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 24428010
Query: 492 caccctgctatgcccgagcccccgaagcctga 523
|||||||| |||| |||| ||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 360 caccctgctatgcccgagctcccgaagcctga 391
|||||||| |||| |||||||||||||||||
Sbjct: 24428009 caccctgcggtgccggagctcccgaagcctga 24427978
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 24419778 gccggagctgcccaagcatgaggagccgccgcaccc 24419743
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| | || |||| ||||||||||||||||||
Sbjct: 24417351 gccggagcttcccaagcctgagctgccgccgcaccc 24417316
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 210 ccgcaccccgtcatgcccgagctgccaaagcc 241
|||||||||||| |||| |||||||| |||||
Sbjct: 24417062 ccgcaccccgtcgtgccggagctgccgaagcc 24417031
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 213 caccccgtcatgcccgagctgccaaagcctga 244
||||||||| |||| ||| |||||||||||||
Sbjct: 24416978 caccccgtcgtgccggagttgccaaagcctga 24416947
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 312 gtgccacaccccgtggtgccggag 335
||||||||||| ||||||||||||
Sbjct: 24416945 gtgccacaccctgtggtgccggag 24416922
Score = 40.1 bits (20), Expect = 7.9
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 469 tgccaaagcatgagctgccgccgcaccc 496
|||| |||| ||||||||||||||||||
Sbjct: 24413475 tgcccaagcctgagctgccgccgcaccc 24413448
>dbj|AP003840.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1634_B10
Length = 100294
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
|||||||| |||| |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct: 54121 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 54062
Query: 139 aggagg 144
||||||
Sbjct: 54061 aggagg 54056
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 43217 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 43160
Score = 56.0 bits (28), Expect = 1e-04
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 182 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 54033 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 53974
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 45178 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 45119
Query: 238 agcctgaa 245
||||||||
Sbjct: 45118 agcctgaa 45111
Score = 54.0 bits (27), Expect = 5e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 43309 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 43250
Query: 139 agg 141
|||
Sbjct: 43249 agg 43247
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 43079 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 43021
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 45314 ccgccacaccccgtcgtgccggagctgccaaagcc 45280
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 45761 ctgctgctctcgtccagctccatgagcagcgcggcacg 45724
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 45215 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 45158
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 178 tcgtcccggagctgccaaagcccga 202
|||| ||||||||||||||||||||
Sbjct: 43042 tcgtgccggagctgccaaagcccga 43018
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 183 ccggagctgccaaagcccga 202
||||||||||||||||||||
Sbjct: 53990 ccggagctgccaaagcccga 53971
Score = 40.1 bits (20), Expect = 7.9
Identities = 74/92 (80%)
Strand = Plus / Minus
Query: 432 aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 491
|||| ||||||| ||||||||||| || |||||| |||| |||| ||| |||| |
Sbjct: 53936 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 53877
Query: 492 caccctgctatgcccgagcccccgaagcctga 523
|||||||| |||| |||| ||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 360 caccctgctatgcccgagctcccgaagcctga 391
|||||||| |||| |||||||||||||||||
Sbjct: 53876 caccctgcggtgccggagctcccgaagcctga 53845
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 45645 gccggagctgcccaagcatgaggagccgccgcaccc 45610
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| | || |||| ||||||||||||||||||
Sbjct: 43218 gccggagcttcccaagcctgagctgccgccgcaccc 43183
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 210 ccgcaccccgtcatgcccgagctgccaaagcc 241
|||||||||||| |||| |||||||| |||||
Sbjct: 42929 ccgcaccccgtcgtgccggagctgccgaagcc 42898
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 213 caccccgtcatgcccgagctgccaaagcctga 244
||||||||| |||| ||| |||||||||||||
Sbjct: 42845 caccccgtcgtgccggagttgccaaagcctga 42814
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 312 gtgccacaccccgtggtgccggag 335
||||||||||| ||||||||||||
Sbjct: 42812 gtgccacaccctgtggtgccggag 42789
Score = 40.1 bits (20), Expect = 7.9
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 469 tgccaaagcatgagctgccgccgcaccc 496
|||| |||| ||||||||||||||||||
Sbjct: 39342 tgcccaagcctgagctgccgccgcaccc 39315
>dbj|AK106010.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B01, full
insert sequence
Length = 1005
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 183 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 240
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 321 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 379
Score = 54.0 bits (27), Expect = 5e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 91 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 150
Query: 139 agg 141
|||
Sbjct: 151 agg 153
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccga 202
|||| ||||||||||||||||||||
Sbjct: 358 tcgtgccggagctgccaaagcccga 382
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 gtgccacaccccgtggtgccggag 335
||||||||||| ||||||||||||
Sbjct: 588 gtgccacaccctgtggtgccggag 611
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 caccccgtcatgcccgagctgccaaagcctga 244
||||||||| |||| ||| |||||||||||||
Sbjct: 555 caccccgtcgtgccggagttgccaaagcctga 586
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 210 ccgcaccccgtcatgcccgagctgccaaagcc 241
|||||||||||| |||| |||||||| |||||
Sbjct: 471 ccgcaccccgtcgtgccggagctgccgaagcc 502
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| | || |||| ||||||||||||||||||
Sbjct: 182 gccggagcttcccaagcctgagctgccgccgcaccc 217
>dbj|AK068696.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013162L16, full
insert sequence
Length = 1006
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
|||||||| || ||||| || || ||||||||||||||| |||| |||||||||||||
Sbjct: 186 ccggagcttcccaagcctgagctgccgccgcaccccgtcgtgccggagctgccaaagc 243
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||||| |||| |||| || |||||||||||| |||| ||||||||||||||
Sbjct: 324 ccggagctgcccaagcacgaagagccaccgcaccccgtcgtgccggagctgccaaagcc 382
Score = 54.0 bits (27), Expect = 5e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
||||||||||||| ||||||||||| |||||| ||||| ||| || ||||||| ||| |
Sbjct: 94 tcttcctcgtggcgctgctgctctcgtgcagcaccatgggcaacgctgcacgacgcctgg 153
Query: 139 agg 141
|||
Sbjct: 154 agg 156
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccga 202
|||| ||||||||||||||||||||
Sbjct: 361 tcgtgccggagctgccaaagcccga 385
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 312 gtgccacaccccgtggtgccggag 335
||||||||||| ||||||||||||
Sbjct: 591 gtgccacaccctgtggtgccggag 614
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 caccccgtcatgcccgagctgccaaagcctga 244
||||||||| |||| ||| |||||||||||||
Sbjct: 558 caccccgtcgtgccggagttgccaaagcctga 589
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 210 ccgcaccccgtcatgcccgagctgccaaagcc 241
|||||||||||| |||| |||||||| |||||
Sbjct: 474 ccgcaccccgtcgtgccggagctgccgaagcc 505
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| | || |||| ||||||||||||||||||
Sbjct: 185 gccggagcttcccaagcctgagctgccgccgcaccc 220
>dbj|AK062673.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G06, full
insert sequence
Length = 678
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 79 tcttcctcgtggctctgctgctctcatgcagctccatgagcagtgcagcacgacacctag 138
|||||||| |||| |||||||||||||| |||||||| ||||| ||||| || |||| |
Sbjct: 104 tcttcctcatggcgctgctgctctcatggagctccatcagcagcgcagctcgctacctgg 163
Query: 139 aggagg 144
||||||
Sbjct: 164 aggagg 169
Score = 56.0 bits (28), Expect = 1e-04
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 182 cccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||||||| || |||||||| || |||||||||| || | |||| ||||||||||||||
Sbjct: 192 cccggagcttccgaagcccgagctgccgccgcacctcgccgtgccggagctgccaaagcc 251
Score = 40.1 bits (20), Expect = 7.9
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 360 caccctgctatgcccgagctcccgaagcctga 391
|||||||| |||| |||||||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380
Score = 40.1 bits (20), Expect = 7.9
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 432 aaggagcctgaagtgccacaccccatggcgccggaggtgccaaagcatgagctgccgccg 491
|||| ||||||| ||||||||||| || |||||| |||| |||| ||| |||| |
Sbjct: 289 aaggtgcctgaactgccacaccccgaggtgccggaattgccgaagcctgaattgcctgag 348
Query: 492 caccctgctatgcccgagcccccgaagcctga 523
|||||||| |||| |||| ||||||||||||
Sbjct: 349 caccctgcggtgccggagctcccgaagcctga 380
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccga 202
||||||||||||||||||||
Sbjct: 235 ccggagctgccaaagcccga 254
>ref|XM_479032.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 994
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 690 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 749
Query: 238 agcctgaa 245
||||||||
Sbjct: 750 agcctgaa 757
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 554 ccgccacaccccgtcgtgccggagctgccaaagcc 588
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 653 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 710
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 107 ctgctgctctcgtccagctccatgagcagcgcggcacg 144
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 223 gccggagctgcccaagcatgaggagccgccgcaccc 258
>ref|XM_507388.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
mRNA
Length = 1071
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748
Query: 238 agcctgaa 245
||||||||
Sbjct: 749 agcctgaa 756
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257
>ref|XM_506448.1 | PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.113
mRNA
Length = 1071
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748
Query: 238 agcctgaa 245
||||||||
Sbjct: 749 agcctgaa 756
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257
>dbj|AK106214.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G11, full
insert sequence
Length = 1071
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748
Query: 238 agcctgaa 245
||||||||
Sbjct: 749 agcctgaa 756
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257
>dbj|AK105918.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H12, full
insert sequence
Length = 1071
Score = 56.0 bits (28), Expect = 1e-04
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 178 tcgtcccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaa 237
|||| ||||||||||| |||| ||| ||||||||||||||| |||| |||||||| |
Sbjct: 689 tcgtgccggagctgcccaagcacgaggagccgccgcaccccgtcgtgccggagctgccga 748
Query: 238 agcctgaa 245
||||||||
Sbjct: 749 agcctgaa 756
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 207 ccgccgcaccccgtcatgcccgagctgccaaagcc 241
||||| ||||||||| |||| ||||||||||||||
Sbjct: 553 ccgccacaccccgtcgtgccggagctgccaaagcc 587
Score = 44.1 bits (22), Expect = 0.50
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 183 ccggagctgccaaagcccgaactcccgccgcaccccgtcatgcccgagctgccaaagc 240
||||||||||| |||| |||| ||||||||||| ||| |||| |||||||| ||||
Sbjct: 652 ccggagctgcctaagcacgaagagccgccgcaccctgtcgtgccggagctgcccaagc 709
Score = 44.1 bits (22), Expect = 0.50
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 93 ctgctgctctcatgcagctccatgagcagtgcagcacg 130
||||||||||| | ||||||||||||||| || |||||
Sbjct: 106 ctgctgctctcgtccagctccatgagcagcgcggcacg 143
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 461 gccggaggtgccaaagcatgagctgccgccgcaccc 496
||||||| |||| ||||||||| ||||||||||||
Sbjct: 222 gccggagctgcccaagcatgaggagccgccgcaccc 257
>gb|M34473.1 |MUSIGKABM Mouse Ig processed pseudo-kappa-chain mRNA J-C-region
Length = 798
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 tggcctcctttgtcttcctc 86
||||||||||||||||||||
Sbjct: 304 tggcctcctttgtcttcctc 323
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,848,157
Number of Sequences: 3902068
Number of extensions: 3848157
Number of successful extensions: 90101
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89626
Number of HSP's gapped (non-prelim): 463
length of query: 579
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 556
effective length of database: 17,143,297,704
effective search space: 9531673523424
effective search space used: 9531673523424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)