ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart33a02 |
|---|---|
| Clone Library Name | barley_pub |
>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol| oxygenase) Length = 308 Score = 261 bits (667), Expect = 1e-69 Identities = 126/156 (80%), Positives = 138/156 (88%), Gaps = 5/156 (3%) Frame = +3 Query: 114 MTIIIDQTQFDAAAERKVAGDPG-----ELVLDGGFTVPDSNAFGHTFRDYDAESERKKT 278 MTI I+Q DA A+RKVAG G ELVLDGGF VPDSNAFG+ FR+Y+AESERK+T Sbjct: 1 MTITIEQPHLDAIADRKVAGGGGGDNAAELVLDGGFVVPDSNAFGNAFRNYEAESERKET 60 Query: 279 VEEFYRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHL 458 VEEFYRVNHI+QTY+FVRRMR+ Y R+D+TEM IWECIELLNEFIDDSDPDLDMPQIEHL Sbjct: 61 VEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEHL 120 Query: 459 LQTAEATRKDYPDEDWLHLTGLIHDLGKVLLHPSFG 566 LQTAEA RKD+PDEDWLHLTGLIHDLGKVLLHPSFG Sbjct: 121 LQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFG 156
>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol| oxygenase 1) (AtMIOX1) Length = 311 Score = 225 bits (573), Expect = 8e-59 Identities = 115/159 (72%), Positives = 128/159 (80%), Gaps = 8/159 (5%) Frame = +3 Query: 114 MTIIIDQ--TQFDAAAE--RKVAG----DPGELVLDGGFTVPDSNAFGHTFRDYDAESER 269 MTI+ID+ Q DA E K G + ELVLD GF P +N+FG TFRDYDAESER Sbjct: 1 MTILIDRHSDQNDAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESER 60 Query: 270 KKTVEEFYRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQI 449 ++ VEEFYRVNHI QT +FVR+MR+ Y +L+RTEMSIWEC ELLNEFID+SDPDLD PQI Sbjct: 61 RRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQI 120 Query: 450 EHLLQTAEATRKDYPDEDWLHLTGLIHDLGKVLLHPSFG 566 EHLLQTAEA RKDYPDEDWLHLTGLIHDLGKVLLH SFG Sbjct: 121 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFG 159
>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol| oxygenase 4) (AtMIOX4) Length = 317 Score = 196 bits (499), Expect = 3e-50 Identities = 97/165 (58%), Positives = 121/165 (73%), Gaps = 14/165 (8%) Frame = +3 Query: 114 MTIIIDQTQFDAAAERKVAGDP-GELVLDGGFTVP-------------DSNAFGHTFRDY 251 MTI +++ F+ + + +GD GEL LDGGF++P + NAFG FRDY Sbjct: 1 MTISVEKPIFEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDY 60 Query: 252 DAESERKKTVEEFYRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPD 431 D ESER+K VEEFYR+ HI+QT +FV++MR Y +LD+ MSIWEC ELLNE +D+SDPD Sbjct: 61 DVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPD 120 Query: 432 LDMPQIEHLLQTAEATRKDYPDEDWLHLTGLIHDLGKVLLHPSFG 566 LD PQI+HLLQ+AEA RKDYP+EDWLHLT LIHDLGKV+ P FG Sbjct: 121 LDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFG 165
>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol| oxygenase 2) (AtMIOX2) Length = 317 Score = 195 bits (496), Expect = 7e-50 Identities = 98/165 (59%), Positives = 119/165 (72%), Gaps = 14/165 (8%) Frame = +3 Query: 114 MTIIIDQTQFDAAAERK--VAGDPGELVLDGGFTVP-----------DSNAFGHTFRDYD 254 MTI+++ D+ + K + ELVLDGGF VP D N GH+FRDY+ Sbjct: 1 MTILVEHFVPDSRVDEKKVIEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDYE 60 Query: 255 -AESERKKTVEEFYRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPD 431 ESER++ VEEFYR+ HI QTY+FV++MR Y +L++ EMSIWEC ELLN +D+SDPD Sbjct: 61 NGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDPD 120 Query: 432 LDMPQIEHLLQTAEATRKDYPDEDWLHLTGLIHDLGKVLLHPSFG 566 LD PQI+HLLQTAEA R+DYPDEDWLHLT LIHDLGKVLL P FG Sbjct: 121 LDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFG 165
>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol| oxygenase 5) (AtMIOX5) Length = 314 Score = 169 bits (427), Expect = 7e-42 Identities = 79/125 (63%), Positives = 94/125 (75%), Gaps = 1/125 (0%) Frame = +3 Query: 195 DGGFTVPDSNAFGHTFRDY-DAESERKKTVEEFYRVNHISQTYEFVRRMRDAYARLDRTE 371 D F P+ NAFG FRDY D SER+K+VE FY H +QT +FV++MR Y +LD+ Sbjct: 38 DEVFLAPEMNAFGRQFRDYTDTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMV 97 Query: 372 MSIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEATRKDYPDEDWLHLTGLIHDLGKVLL 551 M+IWEC EL E +D+SDPDLD PQI+HLLQ+AEA RKDYP+EDWLHLT LIHDLGKVL Sbjct: 98 MNIWECCELSKEVVDESDPDLDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLT 157 Query: 552 HPSFG 566 P FG Sbjct: 158 LPQFG 162
>MIOX_RAT (Q9QXN4) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 95.1 bits (235), Expect = 1e-19 Identities = 39/86 (45%), Positives = 58/86 (67%) Frame = +3 Query: 291 YRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTA 470 Y++ H QT +FV R R + +M++ E +++L++ +D+SDPD+D P H QTA Sbjct: 44 YKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTA 103 Query: 471 EATRKDYPDEDWLHLTGLIHDLGKVL 548 E RK +PD+DW HL GL+HDLGK+L Sbjct: 104 EGIRKAHPDKDWFHLVGLLHDLGKIL 129
>MIOX_MOUSE (Q9QXN5) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) Length = 285 Score = 94.7 bits (234), Expect = 2e-19 Identities = 40/86 (46%), Positives = 57/86 (66%) Frame = +3 Query: 291 YRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTA 470 Y++ H QT +FV R R Y +M+I E + +L++ +D+SDPD+D P H QTA Sbjct: 44 YKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAVGMLDDLVDESDPDVDFPNSFHAFQTA 103 Query: 471 EATRKDYPDEDWLHLTGLIHDLGKVL 548 E RK +PD+DW HL GL+HDLGK++ Sbjct: 104 EGIRKAHPDKDWFHLVGLLHDLGKIM 129
>MIOX_PONPY (Q5REY9) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 285 Score = 92.8 bits (229), Expect = 6e-19 Identities = 40/86 (46%), Positives = 56/86 (65%) Frame = +3 Query: 291 YRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTA 470 Y++ H QT +FVR + +M++ E ++LL+ +D+SDPD+D P H QTA Sbjct: 44 YKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTA 103 Query: 471 EATRKDYPDEDWLHLTGLIHDLGKVL 548 E RK +PD+DW HL GL+HDLGKVL Sbjct: 104 EGIRKAHPDKDWFHLVGLLHDLGKVL 129
>MIOX_HUMAN (Q9UGB7) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) (Renal-specific oxidoreductase) (Kidney-specific protein 32) Length = 285 Score = 92.8 bits (229), Expect = 6e-19 Identities = 40/86 (46%), Positives = 56/86 (65%) Frame = +3 Query: 291 YRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTA 470 Y++ H QT +FVR + +M++ E ++LL+ +D+SDPD+D P H QTA Sbjct: 44 YKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTA 103 Query: 471 EATRKDYPDEDWLHLTGLIHDLGKVL 548 E RK +PD+DW HL GL+HDLGKVL Sbjct: 104 EGIRKAHPDKDWFHLVGLLHDLGKVL 129
>MIOX_PIG (Q8WN98) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| (Aldehyde reductase-like 6) Length = 282 Score = 92.0 bits (227), Expect = 1e-18 Identities = 39/87 (44%), Positives = 57/87 (65%) Frame = +3 Query: 291 YRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTA 470 Y++ H QT +FVR+ + M++ E +++L+ +D+SDPD+D P H QTA Sbjct: 41 YKLMHTWQTVDFVRKKHAQFGGFSYKRMTVLEAVDMLDGLVDESDPDVDFPNSFHAFQTA 100 Query: 471 EATRKDYPDEDWLHLTGLIHDLGKVLL 551 E RK +PD+DW HL GL+HDLGKVL+ Sbjct: 101 EGIRKAHPDKDWFHLVGLLHDLGKVLV 127
>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 278 Score = 88.6 bits (218), Expect = 1e-17 Identities = 36/86 (41%), Positives = 57/86 (66%) Frame = +3 Query: 291 YRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTA 470 Y++ H QT +FV++ ++ +S+ + I+ L+E +D+SDPD+D P H QTA Sbjct: 37 YKLMHTHQTLDFVKQKHQVWSNCSHFSLSMMDSIDSLDELVDESDPDVDFPNSFHAFQTA 96 Query: 471 EATRKDYPDEDWLHLTGLIHDLGKVL 548 E R+++PD+DW L GLIHD+GKV+ Sbjct: 97 EGIRREHPDKDWFQLVGLIHDVGKVM 122
>AJSP1_TRINI (P22327) Acidic juvenile hormone-suppressible protein 1 precursor| (AJHSP1) Length = 624 Score = 33.1 bits (74), Expect = 0.56 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 9/101 (8%) Frame = +3 Query: 180 GELVLDGGFTVPD--SNAFGHTFRDYDAESERKKTVEEFYRVNHISQTYEFVRRMRDAYA 353 GE+ G TV D + +FG T +++ VN + Q Y++ RR+RDA Sbjct: 283 GEIPELGHETVKDGTTRSFGTTMEFSSPVRPNNFNLDQPEFVNEVEQIYDYERRVRDAID 342 Query: 354 R-------LDRTEMSIWECIELLNEFIDDSDPDLDMPQIEH 455 + +R ++S E IE+L I + ++D P +++ Sbjct: 343 QGYVLNHLGERIDISAPEAIEILGRVI---EANVDSPNVQY 380
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 32.7 bits (73), Expect = 0.73 Identities = 24/59 (40%), Positives = 28/59 (47%) Frame = -3 Query: 215 RHGEAAVEHELPRVPGDLPLRRRIELSLVDDDGHPDRGKRSPIGALAAARAAEKQGPRR 39 R GE A + LPR LPLR V+ GHP RG I A +A A+ PRR Sbjct: 645 RTGEEAQDGLLPRGRDRLPLRPGDSNQRVERPGHP-RGGHGAINAPSAPDASPPHHPRR 702
>PTPRE_HUMAN (P23469) Receptor-type tyrosine-protein phosphatase epsilon| precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase epsilon) (R-PTP-epsilon) Length = 700 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +3 Query: 318 YEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEATRKDYP- 494 +EFV R+R+ ++ +T+M + L E+ D +LD+ +E LQT T + Sbjct: 364 FEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQTMHGTTTHFDK 423 Query: 495 ---DEDWLHLTGL 524 +E++ LT + Sbjct: 424 IGLEEEFRKLTNV 436
>CYB2_YEAST (P00175) Cytochrome b2, mitochondrial precursor (EC 1.1.2.3)| (L-lactate dehydrogenase [Cytochrome]) (L-lactate ferricytochrome C oxidoreductase) (L-LCR) Length = 591 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 417 DSDPDLDMPQIEHLLQTAEATRKDYPDEDWLHLTGLIHDLGKVL 548 D++P LDM + + + AE + + PD+ W+ + G ++DL + L Sbjct: 79 DNEPKLDMNKQK--ISPAEVAKHNKPDDCWVVINGYVYDLTRFL 120
>NHR1_ONCVO (Q25604) Nuclear hormone receptor-like 1| Length = 367 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 5/66 (7%) Frame = +3 Query: 321 EFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDL-----DMPQIEHLLQTAEATRK 485 E V+R ++ ++D+ + +W+C++ ++E DD DL + +I +L+ T + Sbjct: 291 ENVKRSKE---KIDKIHVELWKCLQSISEMHDDDSSDLLHWPNFLVRIPYLILTVSKMQD 347 Query: 486 DYPDED 503 + DE+ Sbjct: 348 FFQDEN 353
>PTPRE_MOUSE (P49446) Receptor-type tyrosine-protein phosphatase epsilon| precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase epsilon) (R-PTP-epsilon) Length = 699 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +3 Query: 318 YEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEATRKDYP- 494 +EFV R+R+ ++ +T++ + L E+ D +LD+ +E LQT +T + Sbjct: 363 FEFVSRIRNQRPQMVQTDVQYTFIYQALLEYYLYGDTELDVSSLERHLQTLHSTATHFDK 422 Query: 495 ---DEDWLHLTGL 524 +E++ LT + Sbjct: 423 IGLEEEFRKLTNV 435
>HEM0_RAT (Q63147) 5-aminolevulinate synthase, erythroid-specific,| mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta-aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E) Length = 587 Score = 31.2 bits (69), Expect = 2.1 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%) Frame = +3 Query: 219 SNAFGHT--FRDYDAESERKKTVEEFYRVNHISQTYEFVRRMRDAYARLDRTEMSIWECI 392 S AFG+ FRD E ++ T F VN + Y F + + A +D ++S+W C Sbjct: 140 SQAFGYDQFFRDKIMEKKQDHTYRVFKTVNRWANAYPFAQHFSE--ASMDSKDVSVW-C- 195 Query: 393 ELLNEFIDDSDPDLDMPQIEHLLQTAEATRKDY 491 S+ L + + +LQ E T K++ Sbjct: 196 ---------SNDYLGISRHPRVLQAIEETLKNH 219
>KAR3_YEAST (P17119) Kinesin-like protein KAR3 (Nuclear fusion protein)| Length = 729 Score = 30.4 bits (67), Expect = 3.6 Identities = 21/77 (27%), Positives = 37/77 (48%) Frame = +3 Query: 270 KKTVEEFYRVNHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLDMPQI 449 K+ E +V + + E R+RD A +T + E I+ L E+I D+ +L M ++ Sbjct: 306 KRNAYEAIKVK-VKEKEEETTRLRDEVALKQKTNLETLEKIKELEEYIKDT--ELGMKEL 362 Query: 450 EHLLQTAEATRKDYPDE 500 +L E R+ +E Sbjct: 363 NEILIKEETVRRTLHNE 379
>RFAC_ECOLI (P24173) Lipopolysaccharide heptosyltransferase 1 (EC 2.-.-.-)| Length = 319 Score = 30.0 bits (66), Expect = 4.8 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 2/98 (2%) Frame = +3 Query: 252 DAESERKKTVEEFY-RVNHISQTYEFVRRMRDAYAR-LDRTEMSIWECIELLNEFIDDSD 425 D ++ R+ FY R +HI++ V R R+ +A+ L ++ + F+ + Sbjct: 115 DWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLP 174 Query: 426 PDLDMPQIEHLLQTAEATRKDYPDEDWLHLTGLIHDLG 539 D + L K +P+E W L GL+ D G Sbjct: 175 TDAGEYAV--FLHATTRDDKHWPEEHWRELIGLLADSG 210
>ADCY1_MOUSE (O88444) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase| type I) (ATP pyrophosphate-lyase 1) (Ca(2+)/calmodulin-activated adenylyl cyclase) Length = 1118 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +3 Query: 300 NHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLD 437 + + + + D Y LD M + EC+ LLNE I D D +D Sbjct: 864 SQVGVMFASIPNFNDFYIELDGNNMGV-ECLRLLNEIIADFDELMD 908
>ADCY8_RAT (P40146) Adenylate cyclase type 8 (EC 4.6.1.1) (Adenylate cyclase| type VIII) (ATP pyrophosphate-lyase 8) (Ca(2+)/calmodulin-activated adenylyl cyclase) Length = 1248 Score = 30.0 bits (66), Expect = 4.8 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 18/116 (15%) Frame = +3 Query: 231 GHTFRDYDAESERKKTVEEFYRVNHISQTYEFVRRM-------RDAYARLDRTEMSIWEC 389 GH R + E+ + EE Y SQ+Y+ V M D Y++ + + EC Sbjct: 954 GHVARHF---LEKDRDNEELY-----SQSYDAVGVMFASIPGFADFYSQTEMNNQGV-EC 1004 Query: 390 IELLNEFIDDSDPDL------DMPQIEHLLQTAEAT-----RKDYPDEDWLHLTGL 524 + LLNE I D D L D+ +I+ + T A K ++ W HL L Sbjct: 1005 LRLLNEIIADFDELLGEDRFQDIEKIKTIGSTYMAVSGLSPEKQQCEDKWGHLCAL 1060
>ADCY1_BOVIN (P19754) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase| type I) (ATP pyrophosphate-lyase 1) (Ca(2+)/calmodulin-activated adenylyl cyclase) Length = 1134 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +3 Query: 300 NHISQTYEFVRRMRDAYARLDRTEMSIWECIELLNEFIDDSDPDLD 437 + + + + D Y LD M + EC+ LLNE I D D +D Sbjct: 868 SQVGVMFASIPNFNDFYIELDGNNMGV-ECLRLLNEIIADFDELMD 912
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 29.6 bits (65), Expect = 6.2 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = +3 Query: 375 SIWECIELLNEFIDDSDPDLDMPQIEHLLQTAEATRKDYPDEDWLHLTGLIHDL 536 +I E E+L+E +DSD + MP++E + E ++ DE+ L G H L Sbjct: 1036 TISETTEVLDEPFEDSDSERPMPRLEPTFEIEEEEEEE--DENELFPRGYFHCL 1087 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,649,098 Number of Sequences: 219361 Number of extensions: 938572 Number of successful extensions: 4350 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4343 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
