ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart32h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RETO_PAPSO (P93479) Reticuline oxidase precursor (EC 1.21.3.3) (... 119 5e-27
2RETO_ESCCA (P30986) Reticuline oxidase precursor (EC 1.21.3.3) (... 119 6e-27
3HDNO_ARTOX (P08159) 6-hydroxy-D-nicotine oxidase (EC 1.5.3.6) (6... 42 0.002
4MCRA_STRLA (P43485) Mitomycin radical oxidase (EC 1.5.3.-) 40 0.005
5MPAG4_DACGL (P82946) Major pollen allergen Dac g 4 (Fragments) 37 0.041
6ESR1_SPAAU (Q9PVZ9) Estrogen receptor (ER) (Estradiol receptor) ... 35 0.20
7ESR1_ORENI (Q9YH33) Estrogen receptor (ER) (Estradiol receptor) ... 33 0.45
8ESR1_OREAU (P50240) Estrogen receptor (ER) (Estradiol receptor) ... 33 0.45
9MURC_DEIRA (Q9RWN9) UDP-N-acetylmuramate--L-alanine ligase (EC 6... 33 0.77
10YEK3_SCHPO (O36015) Putative ribosomal RNA methyltransferase C4F... 32 1.7
11ESR1_PAGMA (O42132) Estrogen receptor (ER) (Estradiol receptor) ... 32 1.7
12ALL5_APIGR (P81943) Allergen Api g 5 (Fragments) 31 2.2
13GGLO_BOVIN (Q3ZC33) L-gulonolactone oxidase (EC 1.1.3.8) (LGO) (... 31 2.9
14VIT2_FUNHE (Q98893) Vitellogenin-2 precursor (Vitellogenin II) (... 30 3.8
15MIAA_MYCTU (P65352) tRNA delta(2)-isopentenylpyrophosphate trans... 30 3.8
16MIAA_MYCBO (P65353) tRNA delta(2)-isopentenylpyrophosphate trans... 30 3.8
17ESR1_ORYLA (P50241) Estrogen receptor (ER) (Estradiol receptor) ... 30 3.8
18GGLO_PIG (Q8HXW0) L-gulonolactone oxidase (EC 1.1.3.8) (LGO) (L-... 30 5.0
19YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 30 5.0
20GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO) (... 29 8.5
21PMPI_CHLTR (O84882) Probable outer membrane protein pmpI precurs... 29 8.5
22E2AK3_MOUSE (Q9Z2B5) Eukaryotic translation initiation factor 2-... 29 8.5

>RETO_PAPSO (P93479) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 535

 Score =  119 bits (299), Expect = 5e-27
 Identities = 58/132 (43%), Positives = 83/132 (62%)
 Frame = +3

Query: 183 TPSSPSFTPLLKSSIRNPKFFTPSTVRPLYIVTPTNASHVQAAVLCGRRSGLRIRVRSGG 362
           T ++  +  LL +S++NP F  P+  +P +IV P +   + + V C  R    IR+RSGG
Sbjct: 48  TDTNSDYFKLLHASMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGG 107

Query: 363 HDYEGLSYRSVRAEAFAVLDLSSLRSVRVDAQAATAWVDSGAQLGELYYAIGKASSVLGF 542
           H YEGLSY +     F ++D+ +L  + +D  + TAWV+SGA LGELYYAI +++  LGF
Sbjct: 108 HSYEGLSYTA--DTPFVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGF 165

Query: 543 PGGLCPTVGVGG 578
             G CPTVG GG
Sbjct: 166 TAGWCPTVGSGG 177



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>RETO_ESCCA (P30986) Reticuline oxidase precursor (EC 1.21.3.3)|
           (Berberine-bridge-forming enzyme) (BBE)
           (Tetrahydroprotoberberine synthase)
          Length = 538

 Score =  119 bits (298), Expect = 6e-27
 Identities = 67/148 (45%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
 Frame = +3

Query: 141 LSCLSAS-IPRQLVFTPSSPS-FTPLLKSSIRNPKFFTPSTVRPLYIVTPTNASHVQAAV 314
           LSCL+ + +    VF+  S S F   L  SI+NP F      +P  I+ P +   +   +
Sbjct: 28  LSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTI 87

Query: 315 LCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRSVRVDAQAATAWVDSGAQL 494
            C R+    IR+RSGGH YEGLSY S     F ++DL +L  V +D ++ TAWV+SG+ L
Sbjct: 88  RCIRKGSWTIRLRSGGHSYEGLSYTS--DTPFILIDLMNLNRVSIDLESETAWVESGSTL 145

Query: 495 GELYYAIGKASSVLGFPGGLCPTVGVGG 578
           GELYYAI ++SS LGF  G CPTVG GG
Sbjct: 146 GELYYAITESSSKLGFTAGWCPTVGTGG 173



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>HDNO_ARTOX (P08159) 6-hydroxy-D-nicotine oxidase (EC 1.5.3.6) (6-HDNO)|
          Length = 458

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 33/106 (31%), Positives = 46/106 (43%)
 Frame = +3

Query: 261 RPLYIVTPTNASHVQAAVLCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRS 440
           RP  I    +A  V  +V     +GL I VRSGGH+  G +      +   VLDL  + S
Sbjct: 37  RPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATN----DGGIVLDLRLMNS 92

Query: 441 VRVDAQAATAWVDSGAQLGELYYAIGKASSVLGFPGGLCPTVGVGG 578
           + +D   + A +  G   G+L     K    L    G+ P VG  G
Sbjct: 93  IHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCG 136



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>MCRA_STRLA (P43485) Mitomycin radical oxidase (EC 1.5.3.-)|
          Length = 447

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 24/77 (31%), Positives = 37/77 (48%)
 Frame = +3

Query: 261 RPLYIVTPTNASHVQAAVLCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRS 440
           RP Y+V   +   V AAV         + V + GH        SV A+   +++   +  
Sbjct: 29  RPAYVVEAADEQEVAAAVRLAAEQKRPVGVMATGHG------PSVSADDAVLVNTRRMEG 82

Query: 441 VRVDAQAATAWVDSGAQ 491
           V VDA  ATAW+++GA+
Sbjct: 83  VSVDAARATAWIEAGAR 99



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>MPAG4_DACGL (P82946) Major pollen allergen Dac g 4 (Fragments)|
          Length = 55

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +3

Query: 456 QAATAWVDSGAQLGELYYAI 515
           QA TAWVDSGAQLGEL Y +
Sbjct: 23  QARTAWVDSGAQLGELSYGV 42



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>ESR1_SPAAU (Q9PVZ9) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 579

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = +3

Query: 96  YASSVASQGNSSDAFLSCLSASIPRQLVFTPSSPSFTPLLKSSIRNPKFFTPSTVRPLYI 275
           Y++ + + G  SD  L  L +     LVF PSSP  +P ++ +  +   +  +T  P+Y 
Sbjct: 43  YSAPLDAHGPPSDGSLQSLGSGPNSPLVFVPSSPHLSPFMQPANHH---YLETTSTPIYS 99

Query: 276 VTPTNASHVQAAVLCG 323
           V P++   V     CG
Sbjct: 100 V-PSSQHSVSREDQCG 114



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>ESR1_ORENI (Q9YH33) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 585

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 93  CYASSVASQGNSSDAFLSCLSASIPRQLVFTPSSPSFTPLLKSSIRNPKFFTPSTVRPLY 272
           CY++ + + G  SD  L  L +     LVF PSSP  +P +     +   +  +T  P+Y
Sbjct: 42  CYSAPLDAHGPLSDGSLQSLGSGPTSPLVFVPSSPRLSPFMHPPSHH---YLETTSTPVY 98



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>ESR1_OREAU (P50240) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 583

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 93  CYASSVASQGNSSDAFLSCLSASIPRQLVFTPSSPSFTPLLKSSIRNPKFFTPSTVRPLY 272
           CY++ + + G  SD  L  L +     LVF PSSP  +P +     +   +  +T  P+Y
Sbjct: 42  CYSAPLDAHGPLSDGSLQSLGSGPTSPLVFVPSSPRLSPFMHPPSHH---YLETTSTPVY 98



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>MURC_DEIRA (Q9RWN9) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 482

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
 Frame = +3

Query: 288 NASHVQAAVLCGRRSGLRIRVRSGGHDY-------EGLSYRSVRAEAFAVLDLSSLRSVR 446
           NA+ V +AV   R++G R+RV    H Y         L+   + A+   VLD+++     
Sbjct: 359 NATKVASAVQAARQTGRRVRVVFQPHRYLRTQQSWPRLADALMDADEVLVLDIAAASETP 418

Query: 447 VDAQAATAWVDSGAQLG--ELYYAIGKASSVLGF-----PGGLCPTVGVG 575
           ++   AT   D   Q G   ++Y   +A+ V        PG +  T+G G
Sbjct: 419 IEGVHATLITDRMTQGGHPNVHYCPDRAAVVRDLRESAQPGDIIVTMGAG 468



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>YEK3_SCHPO (O36015) Putative ribosomal RNA methyltransferase C4F10.03c (EC|
           2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase)
          Length = 285

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 234 PKFFTPSTVRPLYIVTPTNASHVQAAVLCGRRSG 335
           P  F P   +PL ++ PTNA  +   + CG   G
Sbjct: 210 PSNFQPDLTKPLCVIDPTNAHEIAPFIACGDLDG 243



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>ESR1_PAGMA (O42132) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 581

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +3

Query: 96  YASSVASQGNSSDAFLSCLSASIPRQLVFTPSSPSFTPLLKSSIRNPKFFTPSTVRPLY- 272
           Y++ + + G  SD  L  L +     LVF PSSP  +P +     +   +  +T  P+Y 
Sbjct: 43  YSAPLDAHGPPSDGSLQSLGSGPNSPLVFVPSSPRLSPFMHPPTHH---YLETTSTPVYR 99

Query: 273 IVTPTNASHVQAAVLCG 323
              P++   V     CG
Sbjct: 100 SSVPSSQQSVSREDQCG 116



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>ALL5_APIGR (P81943) Allergen Api g 5 (Fragments)|
          Length = 86

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 429 SLRSVRVDAQAATAWVDSGAQLGELYYAI 515
           +L++V  D  A TA V +GA LGE+YY I
Sbjct: 24  NLKAVIADPVAKTAVVQAGATLGEVYYXI 52



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>GGLO_BOVIN (Q3ZC33) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)|
           (L-gulono-gamma-lactone oxidase) (GLO)
          Length = 439

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 21/98 (21%), Positives = 40/98 (40%)
 Frame = +3

Query: 282 PTNASHVQAAVLCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRSVRVDAQA 461
           PT+   V+  +   R+   R++V  GGH    ++      + F +      R ++VD + 
Sbjct: 26  PTSVEEVREVLALARQQNKRVKVVGGGHSPSDIAC----TDGFMIHMGKMNRVLKVDTEK 81

Query: 462 ATAWVDSGAQLGELYYAIGKASSVLGFPGGLCPTVGVG 575
               V++G  L +L+  + K    L   G +      G
Sbjct: 82  KQVTVEAGILLADLHPQLDKHGLALSNLGAVSDVTAGG 119



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>VIT2_FUNHE (Q98893) Vitellogenin-2 precursor (Vitellogenin II) (VTG II)|
            [Contains: Lipovitellin-1 (LV1); Phosvitin (PV);
            Lipovitellin-2 (LV2)]
          Length = 1687

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
 Frame = +3

Query: 153  SASIPRQLVFTPSSPS-FTP--LLKSSIRNPKFFTPSTVRPLYIVTPTNASHVQAAVL-- 317
            +AS+  Q   +P  P  F P  LLKS I      TPS     Y V   N+  +QA+VL  
Sbjct: 812  AASVEVQATISPPLPEDFHPAHLLKSDISMKASVTPSVSLHTYGVMGVNSPFIQASVLSR 871

Query: 318  ------CGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLD 422
                    ++   R+ +  G   Y+ L    V+  A A L+
Sbjct: 872  AKDHAALPKKMEARLDIVKGYFSYQFLPVEGVKTIASARLE 912



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>MIAA_MYCTU (P65352) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 314

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
 Frame = +3

Query: 258 VRPLYIVTPTNASHVQAAVLCGRRSGLRIRVRSGGHD----YEGLSY----------RSV 395
           +RPL I+ PT A   Q A+    R G R+ V     D    Y G+            R +
Sbjct: 1   MRPLAIIGPTGAGKSQLALDVAARLGARVSVEIVNADAMQLYRGMDIGTAKLPVSERRGI 60

Query: 396 RAEAFAVLDLSSLRSVRVDAQAATAWVDSGAQLGELYYAIG 518
                 VLD++   +V    +AA A +++ A  G +   +G
Sbjct: 61  PHHQLDVLDVTETATVARYQRAAAADIEAIAARGAVPVVVG 101



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>MIAA_MYCBO (P65353) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 314

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
 Frame = +3

Query: 258 VRPLYIVTPTNASHVQAAVLCGRRSGLRIRVRSGGHD----YEGLSY----------RSV 395
           +RPL I+ PT A   Q A+    R G R+ V     D    Y G+            R +
Sbjct: 1   MRPLAIIGPTGAGKSQLALDVAARLGARVSVEIVNADAMQLYRGMDIGTAKLPVSERRGI 60

Query: 396 RAEAFAVLDLSSLRSVRVDAQAATAWVDSGAQLGELYYAIG 518
                 VLD++   +V    +AA A +++ A  G +   +G
Sbjct: 61  PHHQLDVLDVTETATVARYQRAAAADIEAIAARGAVPVVVG 101



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>ESR1_ORYLA (P50241) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 620

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 21/78 (26%), Positives = 34/78 (43%)
 Frame = +3

Query: 96  YASSVASQGNSSDAFLSCLSASIPRQLVFTPSSPSFTPLLKSSIRNPKFFTPSTVRPLYI 275
           Y++ + + G  S+  L  L +     LVF PSSP  +P +     +   +  +T  P+Y 
Sbjct: 88  YSAPLETNGPPSEGSLQSLGSGPTSPLVFVPSSPRLSPFMHPPSHH---YLETTSTPVYR 144

Query: 276 VTPTNASHVQAAVLCGRR 329
            +   AS       CG R
Sbjct: 145 SSHQGASREDQ---CGSR 159



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>GGLO_PIG (Q8HXW0) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)|
           (L-gulono-gamma-lactone oxidase) (GLO)
          Length = 439

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 20/98 (20%), Positives = 40/98 (40%)
 Frame = +3

Query: 282 PTNASHVQAAVLCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRSVRVDAQA 461
           PT+   ++  +   R+   R++V  GGH    ++      + F +      R ++VD + 
Sbjct: 26  PTSVEEIREVLALARQQNKRVKVVGGGHSPSDIAC----TDGFMIHMGKMNRVLKVDMEK 81

Query: 462 ATAWVDSGAQLGELYYAIGKASSVLGFPGGLCPTVGVG 575
               V++G  L +L+  + K    L   G +      G
Sbjct: 82  KQVTVEAGILLADLHPQLDKHGLALSNLGAVSDVTAGG 119



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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 35/145 (24%), Positives = 55/145 (37%)
 Frame = +3

Query: 99  ASSVASQGNSSDAFLSCLSASIPRQLVFTPSSPSFTPLLKSSIRNPKFFTPSTVRPLYIV 278
           AS  +S   SS A  S L++S         SS + + L  SSI +    + ST       
Sbjct: 102 ASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLAS 161

Query: 279 TPTNASHVQAAVLCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRSVRVDAQ 458
           + TN++           S L     S       L+  S+ +   A    SSL S    + 
Sbjct: 162 SSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAA-SN 220

Query: 459 AATAWVDSGAQLGELYYAIGKASSV 533
           +AT+   + + L     A   +SS+
Sbjct: 221 SATSSSLASSSLNSTTSATATSSSI 245



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>GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)|
           (L-gulono-gamma-lactone oxidase) (GLO)
          Length = 439

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 23/99 (23%), Positives = 43/99 (43%)
 Frame = +3

Query: 282 PTNASHVQAAVLCGRRSGLRIRVRSGGHDYEGLSYRSVRAEAFAVLDLSSLRSVRVDAQA 461
           PT+   V+  +   R+   +++V  GGH    ++      + F +      R ++VD + 
Sbjct: 26  PTSVGEVREVLALARQQNKKVKVVGGGHSPSDIAC----TDGFMIHMGKMNRVLQVDKEK 81

Query: 462 ATAWVDSGAQLGELYYAIGKASSVLGFPGGLCPTVGVGG 578
               V++G  L +L+  + K    L   G +   V VGG
Sbjct: 82  KQVTVEAGILLTDLHPQLDKHGLALSNLGAV-SDVTVGG 119



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>PMPI_CHLTR (O84882) Probable outer membrane protein pmpI precursor|
           (Polymorphic membrane protein I)
          Length = 878

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
 Frame = +3

Query: 132 DAFLSCLSASIPRQLVFTP----SSPSFTPL---LKSSIRNPKFFTPSTVRPLYIVTPTN 290
           DA LS L A     L F P    SS   +PL   L++S+ +P   TP+T  PL I T  N
Sbjct: 336 DAILSSLEARNGDILFFDPIVQESSSKESPLPSSLQASVTSP---TPATASPLVIQTSAN 392

Query: 291 AS 296
            S
Sbjct: 393 RS 394



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>E2AK3_MOUSE (Q9Z2B5) Eukaryotic translation initiation factor 2-alpha kinase 3|
           precursor (EC 2.7.11.1) (PRKR-like endoplasmic reticulum
           kinase) (Pancreatic eIF2-alpha kinase)
          Length = 1114

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -3

Query: 572 DADGRAQAAGEPEHAAGLPDRIIELAELGSGVHPRGRRL 456
           DA+    AAGEPE  A  PD  +EL        PRGR L
Sbjct: 70  DAEALPAAAGEPESRATEPDDDVEL-------RPRGRSL 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,116,640
Number of Sequences: 219361
Number of extensions: 908036
Number of successful extensions: 3665
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3575
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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