ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart32f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483551.1| Oryza sativa (japonica cultivar-group), mRNA 172 8e-40
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
3dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
4dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
5dbj|AK067831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 8e-40
6dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone... 50 0.008
7ref|XM_530052.1| PREDICTED: Pan troglodytes LOC456137 (LOC456137... 40 7.9
8gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 7.9
9gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.9
10gb|AC074212.5| Homo sapiens chromosome 19 clone LLNLF-145F10, co... 40 7.9
11gb|AC126696.1| Homo sapiens chromosome 16 clone RP4-536B24, comp... 40 7.9
12gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, comp... 40 7.9
13gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp... 40 7.9
14gb|AC063933.13| Homo sapiens 3 BAC RP11-566A3 (Roswell Park Canc... 40 7.9
15ref|XM_944980.1| PREDICTED: Homo sapiens hypothetical LOC388553 ... 40 7.9
16ref|XM_373809.3| PREDICTED: Homo sapiens hypothetical LOC388553 ... 40 7.9
17dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
18gb|AC122918.4| Mus musculus chromosome 6 clone RP23-29F15, compl... 40 7.9
19gb|AC007774.1|AC007774 Homo sapiens chromosome 19, cosmid R26955... 40 7.9
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
21emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.9
22gb|AC145948.5| Gallus gallus BAC clone CH261-24O17 from chromoso... 40 7.9
23emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chr... 40 7.9 
>ref|XM_483551.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1691

 Score =  172 bits (87), Expect = 8e-40
 Identities = 255/311 (81%)
 Strand = Plus / Plus

                                                                       
Query: 28  gagaaggcccctgaaggctatgaggagaaatggttgctcaatatccatgccatcgacacg 87
           |||||| |||||||||| |||||||||||||||||| ||||| | |||||||| ||||| 
Sbjct: 511 gagaagccccctgaaggatatgaggagaaatggttgatcaatgtgcatgccattgacaca 570

                                                                       
Query: 88  aggggcgtggtcgacaagcctagctgcaccgagtgcaagtgcgactcttacaacgtcaca 147
           ||||| | | |||||||||   | ||||| ||||||||||| ||   ||||||| | || 
Sbjct: 571 aggggtgcgatcgacaagctaggatgcactgagtgcaagtgtgatctttacaacatgacg 630

                                                                       
Query: 148 atcgatgagtatgggcgcacagtctcgaagaactacactggtgggttgctttgctgctat 207
           ||||| ||||||||||||| | || | ||| |||||| |||||| ||   ||||||||||
Sbjct: 631 atcgacgagtatgggcgcaaactcccaaaggactacattggtggtttatattgctgctat 690

                                                                       
Query: 208 gatcagacccagtgtcagctcaaggaagggttcaatggcgaggtgcggacggtgttcttg 267
           ||| |||| |||||  || | |||||||| ||||| || ||| | |||| | ||||||||
Sbjct: 691 gatgagacgcagtgcaaggttaaggaaggtttcaacggtgagctacggaagctgttcttg 750

                                                                       
Query: 268 cagtacaccgtgacttggctcgactggactgacgcggtggtgcctgtcaagatctacata 327
           | |||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 751 cggtacactgtgacgtggcttgactggagtgatgcggttgtgccagtcaagatttacata 810

                      
Query: 328 tttgacgttac 338
           ||||| |||||
Sbjct: 811 tttgatgttac 821



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 376 tgcaaggttgagtatcaagtcgaggaatgcagcacggaaaaccgagccaacaacgagtgc 435
           |||||||||||||| ||||| |||||||||||  | |||||||| ||||| || ||||||
Sbjct: 859 tgcaaggttgagtaccaagttgaggaatgcagtccagaaaaccgggccaagaatgagtgc 918

             
Query: 436 at 437
           ||
Sbjct: 919 at 920



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 80/100 (80%)
 Strand = Plus / Plus

                                                                        
Query: 470  gtggaggagatatcgtgtacagtgttgcgcaccagcactctggaggagtcggtgcttctc 529
            ||||||| ||||||||||   |||| ||||| ||||| || || ||| | ||||| ||| 
Sbjct: 953  gtggaggcgatatcgtgtttggtgtcgcgcatcagcattcaggtggaattggtgcctctt 1012

                                                    
Query: 530  tgcatggccaggatggacgccttctatgtgaatcgcttcc 569
            | || |||||||||||||| || || |||| |||| ||||
Sbjct: 1013 tacacggccaggatggacgtctgctttgtgcatcgattcc 1052
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  172 bits (87), Expect = 8e-40
 Identities = 255/311 (81%)
 Strand = Plus / Plus

                                                                            
Query: 28       gagaaggcccctgaaggctatgaggagaaatggttgctcaatatccatgccatcgacacg 87
                |||||| |||||||||| |||||||||||||||||| ||||| | |||||||| ||||| 
Sbjct: 26912722 gagaagccccctgaaggatatgaggagaaatggttgatcaatgtgcatgccattgacaca 26912781

                                                                            
Query: 88       aggggcgtggtcgacaagcctagctgcaccgagtgcaagtgcgactcttacaacgtcaca 147
                ||||| | | |||||||||   | ||||| ||||||||||| ||   ||||||| | || 
Sbjct: 26912782 aggggtgcgatcgacaagctaggatgcactgagtgcaagtgtgatctttacaacatgacg 26912841

                                                                            
Query: 148      atcgatgagtatgggcgcacagtctcgaagaactacactggtgggttgctttgctgctat 207
                ||||| ||||||||||||| | || | ||| |||||| |||||| ||   ||||||||||
Sbjct: 26912842 atcgacgagtatgggcgcaaactcccaaaggactacattggtggtttatattgctgctat 26912901

                                                                            
Query: 208      gatcagacccagtgtcagctcaaggaagggttcaatggcgaggtgcggacggtgttcttg 267
                ||| |||| |||||  || | |||||||| ||||| || ||| | |||| | ||||||||
Sbjct: 26912902 gatgagacgcagtgcaaggttaaggaaggtttcaacggtgagctacggaagctgttcttg 26912961

                                                                            
Query: 268      cagtacaccgtgacttggctcgactggactgacgcggtggtgcctgtcaagatctacata 327
                | |||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 26912962 cggtacactgtgacgtggcttgactggagtgatgcggttgtgccagtcaagatttacata 26913021

                           
Query: 328      tttgacgttac 338
                ||||| |||||
Sbjct: 26913022 tttgatgttac 26913032



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 380      aggttgagtatcaagtcgaggaatgcagcacggaaaaccgagccaacaacgagtgcat 437
                |||||||||| ||||| |||||||||||  | |||||||| ||||| || ||||||||
Sbjct: 26913206 aggttgagtaccaagttgaggaatgcagtccagaaaaccgggccaagaatgagtgcat 26913263
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>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score =  172 bits (87), Expect = 8e-40
 Identities = 255/311 (81%)
 Strand = Plus / Plus

                                                                         
Query: 28    gagaaggcccctgaaggctatgaggagaaatggttgctcaatatccatgccatcgacacg 87
             |||||| |||||||||| |||||||||||||||||| ||||| | |||||||| ||||| 
Sbjct: 14122 gagaagccccctgaaggatatgaggagaaatggttgatcaatgtgcatgccattgacaca 14181

                                                                         
Query: 88    aggggcgtggtcgacaagcctagctgcaccgagtgcaagtgcgactcttacaacgtcaca 147
             ||||| | | |||||||||   | ||||| ||||||||||| ||   ||||||| | || 
Sbjct: 14182 aggggtgcgatcgacaagctaggatgcactgagtgcaagtgtgatctttacaacatgacg 14241

                                                                         
Query: 148   atcgatgagtatgggcgcacagtctcgaagaactacactggtgggttgctttgctgctat 207
             ||||| ||||||||||||| | || | ||| |||||| |||||| ||   ||||||||||
Sbjct: 14242 atcgacgagtatgggcgcaaactcccaaaggactacattggtggtttatattgctgctat 14301

                                                                         
Query: 208   gatcagacccagtgtcagctcaaggaagggttcaatggcgaggtgcggacggtgttcttg 267
             ||| |||| |||||  || | |||||||| ||||| || ||| | |||| | ||||||||
Sbjct: 14302 gatgagacgcagtgcaaggttaaggaaggtttcaacggtgagctacggaagctgttcttg 14361

                                                                         
Query: 268   cagtacaccgtgacttggctcgactggactgacgcggtggtgcctgtcaagatctacata 327
             | |||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 14362 cggtacactgtgacgtggcttgactggagtgatgcggttgtgccagtcaagatttacata 14421

                        
Query: 328   tttgacgttac 338
             ||||| |||||
Sbjct: 14422 tttgatgttac 14432



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                       
Query: 380   aggttgagtatcaagtcgaggaatgcagcacggaaaaccgagccaacaacgagtgcat 437
             |||||||||| ||||| |||||||||||  | |||||||| ||||| || ||||||||
Sbjct: 14606 aggttgagtaccaagttgaggaatgcagtccagaaaaccgggccaagaatgagtgcat 14663
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>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0665C04
          Length = 177054

 Score =  172 bits (87), Expect = 8e-40
 Identities = 255/311 (81%)
 Strand = Plus / Plus

                                                                          
Query: 28     gagaaggcccctgaaggctatgaggagaaatggttgctcaatatccatgccatcgacacg 87
              |||||| |||||||||| |||||||||||||||||| ||||| | |||||||| ||||| 
Sbjct: 175512 gagaagccccctgaaggatatgaggagaaatggttgatcaatgtgcatgccattgacaca 175571

                                                                          
Query: 88     aggggcgtggtcgacaagcctagctgcaccgagtgcaagtgcgactcttacaacgtcaca 147
              ||||| | | |||||||||   | ||||| ||||||||||| ||   ||||||| | || 
Sbjct: 175572 aggggtgcgatcgacaagctaggatgcactgagtgcaagtgtgatctttacaacatgacg 175631

                                                                          
Query: 148    atcgatgagtatgggcgcacagtctcgaagaactacactggtgggttgctttgctgctat 207
              ||||| ||||||||||||| | || | ||| |||||| |||||| ||   ||||||||||
Sbjct: 175632 atcgacgagtatgggcgcaaactcccaaaggactacattggtggtttatattgctgctat 175691

                                                                          
Query: 208    gatcagacccagtgtcagctcaaggaagggttcaatggcgaggtgcggacggtgttcttg 267
              ||| |||| |||||  || | |||||||| ||||| || ||| | |||| | ||||||||
Sbjct: 175692 gatgagacgcagtgcaaggttaaggaaggtttcaacggtgagctacggaagctgttcttg 175751

                                                                          
Query: 268    cagtacaccgtgacttggctcgactggactgacgcggtggtgcctgtcaagatctacata 327
              | |||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 175752 cggtacactgtgacgtggcttgactggagtgatgcggttgtgccagtcaagatttacata 175811

                         
Query: 328    tttgacgttac 338
              ||||| |||||
Sbjct: 175812 tttgatgttac 175822



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 380    aggttgagtatcaagtcgaggaatgcagcacggaaaaccgagccaacaacgagtgcat 437
              |||||||||| ||||| |||||||||||  | |||||||| ||||| || ||||||||
Sbjct: 175996 aggttgagtaccaagttgaggaatgcagtccagaaaaccgggccaagaatgagtgcat 176053
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>dbj|AK067831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121M08, full
           insert sequence
          Length = 1719

 Score =  172 bits (87), Expect = 8e-40
 Identities = 255/311 (81%)
 Strand = Plus / Plus

                                                                       
Query: 28  gagaaggcccctgaaggctatgaggagaaatggttgctcaatatccatgccatcgacacg 87
           |||||| |||||||||| |||||||||||||||||| ||||| | |||||||| ||||| 
Sbjct: 511 gagaagccccctgaaggatatgaggagaaatggttgatcaatgtgcatgccattgacaca 570

                                                                       
Query: 88  aggggcgtggtcgacaagcctagctgcaccgagtgcaagtgcgactcttacaacgtcaca 147
           ||||| | | |||||||||   | ||||| ||||||||||| ||   ||||||| | || 
Sbjct: 571 aggggtgcgatcgacaagctaggatgcactgagtgcaagtgtgatctttacaacatgacg 630

                                                                       
Query: 148 atcgatgagtatgggcgcacagtctcgaagaactacactggtgggttgctttgctgctat 207
           ||||| ||||||||||||| | || | ||| |||||| |||||| ||   ||||||||||
Sbjct: 631 atcgacgagtatgggcgcaaactcccaaaggactacattggtggtttatattgctgctat 690

                                                                       
Query: 208 gatcagacccagtgtcagctcaaggaagggttcaatggcgaggtgcggacggtgttcttg 267
           ||| |||| |||||  || | |||||||| ||||| || ||| | |||| | ||||||||
Sbjct: 691 gatgagacgcagtgcaaggttaaggaaggtttcaacggtgagctacggaagctgttcttg 750

                                                                       
Query: 268 cagtacaccgtgacttggctcgactggactgacgcggtggtgcctgtcaagatctacata 327
           | |||||| ||||| ||||| ||||||| ||| ||||| ||||| |||||||| ||||||
Sbjct: 751 cggtacactgtgacgtggcttgactggagtgatgcggttgtgccagtcaagatttacata 810

                      
Query: 328 tttgacgttac 338
           ||||| |||||
Sbjct: 811 tttgatgttac 821



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 376 tgcaaggttgagtatcaagtcgaggaatgcagcacggaaaaccgagccaacaacgagtgc 435
           |||||||||||||| ||||| |||||||||||  | |||||||| ||||| || ||||||
Sbjct: 859 tgcaaggttgagtaccaagttgaggaatgcagtccagaaaaccgggccaagaatgagtgc 918

             
Query: 436 at 437
           ||
Sbjct: 919 at 920



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 80/100 (80%)
 Strand = Plus / Plus

                                                                        
Query: 470  gtggaggagatatcgtgtacagtgttgcgcaccagcactctggaggagtcggtgcttctc 529
            ||||||| ||||||||||   |||| ||||| ||||| || || ||| | ||||| ||| 
Sbjct: 953  gtggaggcgatatcgtgtttggtgtcgcgcatcagcattcaggtggaattggtgcctctt 1012

                                                    
Query: 530  tgcatggccaggatggacgccttctatgtgaatcgcttcc 569
            | || |||||||||||||| || || |||| |||| ||||
Sbjct: 1013 tacacggccaggatggacgtctgctttgtgcatcgattcc 1052
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>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
             complete sequence
          Length = 92741

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 40    gaaggctatgaggagaaatggttgctcaatatccatgccat 80
             ||||| |||||||||||||||||||| ||| |||| |||||
Sbjct: 45077 gaagggtatgaggagaaatggttgctgaatgtccacgccat 45037



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 40    gaaggctatgaggagaaatggttgctcaatatccatgccat 80
             ||||| ||||||||||||||| |||| ||| | ||||||||
Sbjct: 52133 gaagggtatgaggagaaatggatgctgaatgtgcatgccat 52093
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>ref|XM_530052.1| PREDICTED: Pan troglodytes LOC456137 (LOC456137), mRNA
          Length = 2270

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  gaggagaaatggttgctcaa 68
           ||||||||||||||||||||
Sbjct: 561 gaggagaaatggttgctcaa 580
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 395     tcgaggaatgcagcacggaa 414
               ||||||||||||||||||||
Sbjct: 2899951 tcgaggaatgcagcacggaa 2899932
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 232     gaagggttcaatggcgaggt 251
               ||||||||||||||||||||
Sbjct: 1140062 gaagggttcaatggcgaggt 1140081
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>gb|AC074212.5| Homo sapiens chromosome 19 clone LLNLF-145F10, complete sequence
          Length = 40311

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  gaggagaaatggttgctcaa 68
           ||||||||||||||||||||
Sbjct: 704 gaggagaaatggttgctcaa 723
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>gb|AC126696.1| Homo sapiens chromosome 16 clone RP4-536B24, complete sequence
          Length = 108708

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ccggcaaccaagagaaggcc 36
             ||||||||||||||||||||
Sbjct: 53331 ccggcaaccaagagaaggcc 53350
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>gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, complete sequence
          Length = 176901

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 501   ccagcactctggaggagtcggtgcttct 528
             |||||||||||||||||| ||| |||||
Sbjct: 71904 ccagcactctggaggagtgggttcttct 71877
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>gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, complete sequence
          Length = 171297

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 501  ccagcactctggaggagtcggtgcttct 528
            |||||||||||||||||| ||| |||||
Sbjct: 6549 ccagcactctggaggagtgggttcttct 6576
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>gb|AC063933.13| Homo sapiens 3 BAC RP11-566A3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168380

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   catccatactaagaccacta 454
             ||||||||||||||||||||
Sbjct: 74582 catccatactaagaccacta 74601
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>ref|XM_944980.1| PREDICTED: Homo sapiens hypothetical LOC388553 (LOC388553), mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 49 gaggagaaatggttgctcaa 68
          ||||||||||||||||||||
Sbjct: 4  gaggagaaatggttgctcaa 23
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>ref|XM_373809.3| PREDICTED: Homo sapiens hypothetical LOC388553 (LOC388553), mRNA
          Length = 1776

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 49 gaggagaaatggttgctcaa 68
          ||||||||||||||||||||
Sbjct: 4  gaggagaaatggttgctcaa 23
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 93       cgtggtcgacaagcctagct 112
                ||||||||||||||||||||
Sbjct: 25696351 cgtggtcgacaagcctagct 25696332
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>gb|AC122918.4| Mus musculus chromosome 6 clone RP23-29F15, complete sequence
          Length = 210315

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    acccagtgtcagctcaagga 233
              ||||||||||||||||||||
Sbjct: 101908 acccagtgtcagctcaagga 101927
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>gb|AC007774.1|AC007774 Homo sapiens chromosome 19, cosmid R26955, complete sequence
          Length = 44936

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gaggagaaatggttgctcaa 68
             ||||||||||||||||||||
Sbjct: 21953 gaggagaaatggttgctcaa 21972
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 93       cgtggtcgacaagcctagct 112
                ||||||||||||||||||||
Sbjct: 25624527 cgtggtcgacaagcctagct 25624508
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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    cgtggtcgacaagcctagct 112
             ||||||||||||||||||||
Sbjct: 63589 cgtggtcgacaagcctagct 63570
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>gb|AC145948.5| Gallus gallus BAC clone CH261-24O17 from chromosome unknown, complete
             sequence
          Length = 242530

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   ctggaggagtcggtgcttct 528
             ||||||||||||||||||||
Sbjct: 76412 ctggaggagtcggtgcttct 76431
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>emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chromosome 4, complete
             sequence
          Length = 142447

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   tgcttctctgcatggccagg 541
             ||||||||||||||||||||
Sbjct: 45846 tgcttctctgcatggccagg 45865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,258,706
Number of Sequences: 3902068
Number of extensions: 3258706
Number of successful extensions: 57476
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57387
Number of HSP's gapped (non-prelim): 89
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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