ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart32f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHOSP_NDVB (P24698) Phosphoprotein (Protein P) 30 3.7
2Y147_HAEIN (P44543) Putative TRAP transporter permease protein H... 29 8.3

>PHOSP_NDVB (P24698) Phosphoprotein (Protein P)|
          Length = 395

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 328 AWTNHGQQEPPAQQN-PRYFTRNNDQPSPPRSS 233
           AW  HG  +PPA Q+ P    R++ QPS P  +
Sbjct: 50  AWEKHGSIQPPASQDTPDRQDRSDKQPSTPEQA 82



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>Y147_HAEIN (P44543) Putative TRAP transporter permease protein HI0147|
          Length = 633

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +1

Query: 280 WGFAALEVLAGHGLSRHAEAQSLSFMKIATHLRRCCFLQSFSVVFLYYFY 429
           W FAAL V+A   + R  +AQ+L+F    ++L    F+ S  ++F   F+
Sbjct: 140 WIFAALPVVAILMMFRFIQAQTLNFKTGKSYLPATFFIISAVILFAILFF 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,678,041
Number of Sequences: 219361
Number of extensions: 907182
Number of successful extensions: 2516
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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