ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart32f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromo... 29 4.1
2MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing pro... 28 9.2

>KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1232

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 128 TAAAAGRYCSGSTYWLGGSFTPAPTSSCTIGGTSRIL 18
           T  A G+  SG TY +GG++T    +  T+G   R++
Sbjct: 83  TVLAYGQTGSGKTYSMGGAYTAEQENEPTVGVIPRVI 119



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>MISS_MOUSE (Q9D7G9) MAPK-interacting and spindle-stabilizing protein|
           (Mitogen-activated protein kinase 1-interacting protein
           1)
          Length = 263

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 34  PPIVQELVGAGVKEPPSQYVLPEQYRPA 117
           PP+    V  G  EPP+QY  PE   P+
Sbjct: 111 PPVAWVTVPPGAWEPPAQYPTPEASYPS 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.135    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,570,120
Number of Sequences: 219361
Number of extensions: 303003
Number of successful extensions: 987
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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