ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart32f04 |
|---|---|
| Clone Library Name | barley_pub |
>Y865_MYCCT (P43045) Hypothetical protein MCAP_0865 (ORF R6/R7)| Length = 385 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = +3 Query: 96 LMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAAISTWVVYKEGNWISSI----F 263 L+VG + +T+ + LTP +T L +++++ ++S +V G+W+S I Sbjct: 305 LIVGCTFFYFLTNN-----QKLTPLKITLLALYFLHLVSMSFAIVVNRGHWVSDITFTYL 359 Query: 264 WVVLLI 281 W++ LI Sbjct: 360 WLLPLI 365
>POT5_ARATH (Q9M7K4) Potassium transporter 5 (AtPOT5) (AtHAK1) (AtHAK5)| Length = 785 Score = 31.2 bits (69), Expect = 2.3 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = +3 Query: 87 LGCLMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAAISTWVVYKEGNWISSIFW 266 L C+ V T G + I ++T ++TTL+ + + W ++I W Sbjct: 431 LACIAVTLAFRTTEKIGHAYGIAVVTVMVITTLMVTLIMLVI-----------WKTNIVW 479 Query: 267 V-VLLICFGSATTCAYIVSKLFEITSSG 347 + + L+ FGS Y+ S +++ TS G Sbjct: 480 IAIFLVVFGS-IEMLYLSSVMYKFTSGG 506
>CYB_TRYBO (Q33568) Cytochrome b| Length = 372 Score = 30.8 bits (68), Expect = 3.0 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +3 Query: 93 CLMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAA--ISTWVVYKEGNWISSIFW 266 C + + CI R LL W+ +LV FY +S +VV W+ FW Sbjct: 302 CFALFLFILNCILIFIYCRSSLL--WMSLSLVLFYYLCVGGFLSLYVVLCFPLWMEIQFW 359 Query: 267 VVLLICF 287 V+LL CF Sbjct: 360 VLLLFCF 366
>CDSA_SHIFL (P0ABG3) Phosphatidate cytidylyltransferase (EC 2.7.7.41)| (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) Length = 249 Score = 30.0 bits (66), Expect = 5.1 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = +3 Query: 174 VTTLVDFYVNIAAISTWVVYKEGNWISSIFWVVLLICFGSATTCAYIVSKLF 329 V T+V F+ + A+ W Y E ++ +I+ + ++I A + AY+ KLF Sbjct: 89 VLTIVPFFWGMLALRAWH-YDENHYSGAIWLLYVMILVWGADSGAYMFGKLF 139
>CDSA_ECOLI (P0ABG1) Phosphatidate cytidylyltransferase (EC 2.7.7.41)| (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) Length = 249 Score = 30.0 bits (66), Expect = 5.1 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = +3 Query: 174 VTTLVDFYVNIAAISTWVVYKEGNWISSIFWVVLLICFGSATTCAYIVSKLF 329 V T+V F+ + A+ W Y E ++ +I+ + ++I A + AY+ KLF Sbjct: 89 VLTIVPFFWGMLALRAWH-YDENHYSGAIWLLYVMILVWGADSGAYMFGKLF 139
>CDSA_ECO57 (P0ABG2) Phosphatidate cytidylyltransferase (EC 2.7.7.41)| (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDS) (CTP:phosphatidate cytidylyltransferase) (CDP-DAG synthase) (CDP-DG synthetase) Length = 249 Score = 30.0 bits (66), Expect = 5.1 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = +3 Query: 174 VTTLVDFYVNIAAISTWVVYKEGNWISSIFWVVLLICFGSATTCAYIVSKLF 329 V T+V F+ + A+ W Y E ++ +I+ + ++I A + AY+ KLF Sbjct: 89 VLTIVPFFWGMLALRAWH-YDENHYSGAIWLLYVMILVWGADSGAYMFGKLF 139
>TNPO1_MOUSE (Q8BFY9) Transportin-1 (Importin beta-2) (Karyopherin beta-2)| Length = 890 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 90 GCLMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAAISTWVVYKEGNWISS 257 G L++G + C+ P+ EL+ P ++ L D + +I+ W + + +W+ S Sbjct: 417 GILVLGAIAEGCMQGMIPYLPELI-PHLIQCLSDKKALVRSITCWTLSRYAHWVVS 471
>TNPO1_HUMAN (Q92973) Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9| region interaction protein) (MIP) Length = 890 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 90 GCLMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAAISTWVVYKEGNWISS 257 G L++G + C+ P+ EL+ P ++ L D + +I+ W + + +W+ S Sbjct: 417 GILVLGAIAEGCMQGMIPYLPELI-PHLIQCLSDKKALVRSITCWTLSRYAHWVVS 471
>TNPO2_MOUSE (Q99LG2) Transportin-2 (Karyopherin beta-2b)| Length = 887 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 90 GCLMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAAISTWVVYKEGNWISS 257 G L++G + C+ P+ EL+ P ++ L D + +I+ W + + +W+ S Sbjct: 414 GILVLGAIAEGCMQGMVPYLPELI-PHLIQCLSDKKALVRSIACWTLSRYAHWVVS 468
>RBD2_DEBHA (Q6BSA9) Rhomboid protein 2 (EC 3.4.21.-)| Length = 286 Score = 29.3 bits (64), Expect = 8.7 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +1 Query: 364 LIFCCSGKIIYPKGSVLLLSSGE-LFSAFWAYSWLHLSRIL 483 L FC GK++YP V+ LS LF +F AY H + ++ Sbjct: 114 LQFCIVGKLLYPNTQVIGLSGVVFLFMSFMAYKEHHTTPVI 154
>UDDP_SULAC (P80143) Undecaprenyl-diphosphatase (EC 3.6.1.27)| (Dolicholpyrophosphatase) Length = 206 Score = 29.3 bits (64), Expect = 8.7 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +3 Query: 444 ILGILMAALVTYTVITDGLPFRKDLLTPWMAATLIDF 554 ILGI+ A LV+Y+ + G+ + D++ W+ + I F Sbjct: 150 ILGIIEAVLVSYSRVYVGVHWPLDVIAGWLLGSWISF 186
>TNPO2_HUMAN (O14787) Transportin-2 (Karyopherin beta-2b)| Length = 897 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/56 (25%), Positives = 29/56 (51%) Frame = +3 Query: 90 GCLMVGTLVYTCITDGSPFRIELLTPWIVTTLVDFYVNIAAISTWVVYKEGNWISS 257 G L++G + C+ P+ EL+ P ++ L D + +I+ W + + +W+ S Sbjct: 414 GILVLGAIAEGCMQGMVPYLPELI-PHLIQCLSDKKALVRSIACWTLSRYAHWVVS 468 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,770,075 Number of Sequences: 219361 Number of extensions: 1630671 Number of successful extensions: 5103 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5101 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
