Clone Name | bart32e11 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1953 Score = 353 bits (178), Expect = 4e-94 Identities = 340/394 (86%) Strand = Plus / Plus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 1244 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 1303 Query: 189 atcagaaacagttaggtgaccagagtgcgaatggaaagagcgtcggattagacccaatga 248 ||||||| |||||||||||||||| ||| |||||||||||| ||||||| ||||| || Sbjct: 1304 atcagaagcagttaggtgaccagaatgcaaatggaaagagcatcggattggacccgatcg 1363 Query: 249 tggatgctttgcaatcaccttctagatggccattggaatttgagaggaaacagcaggaga 308 || || || || ||||||||| ||||||| |||||||| |||| ||| ||||| |||| Sbjct: 1364 agggtgtttctcagtcaccttctcgatggcctttggaattcgagaagaagcagcaagaga 1423 Query: 309 tcatcgagctctggcacgcttgcagcatttcgttggtccacaggacatactttttcttgc 368 |||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 1424 tcatcgagctttggcaagcttgcagcatttccttggtccacaggacttactttttcttgc 1483 Query: 369 tcttcaaaggagaatcagccgactcgatttacatggaagtggagcttcggaggctgttgt 428 | ||||| |||||| |||| |||||||| |||||||||||||||||||| ||||| | | Sbjct: 1484 tattcaagggagaagcagctgactcgatctacatggaagtggagcttcgaaggctatcat 1543 Query: 429 tcctcagagacacctactccaggggaagcacccccagcaacgtggtcgtaggcagcctca 488 |||| ||||| || ||||| ||||| |||||||| ||||| | | | ||||||||||| | Sbjct: 1544 tcctgagagatacatactcaagggggagcacccctagcaatgcgatagtaggcagcctga 1603 Query: 489 gttcttcccctgtcgcgagcgccaagaagctgca 522 || |||||||||| |||||||| ||||||||||| Sbjct: 1604 gtacttcccctgttgcgagcgcaaagaagctgca 1637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 1095 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 1154 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 1155 gaccgacacactttcaagggcaggatc 1181
>ref|XM_467026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3149 Score = 353 bits (178), Expect = 4e-94 Identities = 340/394 (86%) Strand = Plus / Plus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 2211 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 2270 Query: 189 atcagaaacagttaggtgaccagagtgcgaatggaaagagcgtcggattagacccaatga 248 ||||||| |||||||||||||||| ||| |||||||||||| ||||||| ||||| || Sbjct: 2271 atcagaagcagttaggtgaccagaatgcaaatggaaagagcatcggattggacccgatcg 2330 Query: 249 tggatgctttgcaatcaccttctagatggccattggaatttgagaggaaacagcaggaga 308 || || || || ||||||||| ||||||| |||||||| |||| ||| ||||| |||| Sbjct: 2331 agggtgtttctcagtcaccttctcgatggcctttggaattcgagaagaagcagcaagaga 2390 Query: 309 tcatcgagctctggcacgcttgcagcatttcgttggtccacaggacatactttttcttgc 368 |||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 2391 tcatcgagctttggcaagcttgcagcatttccttggtccacaggacttactttttcttgc 2450 Query: 369 tcttcaaaggagaatcagccgactcgatttacatggaagtggagcttcggaggctgttgt 428 | ||||| |||||| |||| |||||||| |||||||||||||||||||| ||||| | | Sbjct: 2451 tattcaagggagaagcagctgactcgatctacatggaagtggagcttcgaaggctatcat 2510 Query: 429 tcctcagagacacctactccaggggaagcacccccagcaacgtggtcgtaggcagcctca 488 |||| ||||| || ||||| ||||| |||||||| ||||| | | | ||||||||||| | Sbjct: 2511 tcctgagagatacatactcaagggggagcacccctagcaatgcgatagtaggcagcctga 2570 Query: 489 gttcttcccctgtcgcgagcgccaagaagctgca 522 || |||||||||| |||||||| ||||||||||| Sbjct: 2571 gtacttcccctgttgcgagcgcaaagaagctgca 2604 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 2062 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 2121 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 2122 gaccgacacactttcaagggcaggatc 2148
>dbj|AK100979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144I23, full insert sequence Length = 3297 Score = 345 bits (174), Expect = 9e-92 Identities = 339/394 (86%) Strand = Plus / Plus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 2211 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 2270 Query: 189 atcagaaacagttaggtgaccagagtgcgaatggaaagagcgtcggattagacccaatga 248 ||||||| |||||||||||||||| ||| |||||||||||| ||||||| ||||| || Sbjct: 2271 atcagaagcagttaggtgaccagaatgcaaatggaaagagcatcggattggacccgatcg 2330 Query: 249 tggatgctttgcaatcaccttctagatggccattggaatttgagaggaaacagcaggaga 308 || || || || ||||||||| ||||||| |||||||| |||| ||| ||||| |||| Sbjct: 2331 agggtgtttctcagtcaccttctcgatggcctttggaattcgagaagaagcagcaagaga 2390 Query: 309 tcatcgagctctggcacgcttgcagcatttcgttggtccacaggacatactttttcttgc 368 |||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 2391 tcatcgagctttggcaagcttgcagcatttccttggtccacaggacttactttttcttgc 2450 Query: 369 tcttcaaaggagaatcagccgactcgatttacatggaagtggagcttcggaggctgttgt 428 | ||||| |||||| |||| |||||||| |||||||||||||||||||| ||||| | | Sbjct: 2451 tattcaagggagaagcagctgactcgatctacatggaagtggagcttcgaaggctatcat 2510 Query: 429 tcctcagagacacctactccaggggaagcacccccagcaacgtggtcgtaggcagcctca 488 |||| ||||| || ||||| ||||| |||||||| ||||| | | | ||||||||||| | Sbjct: 2511 tcctgagagatacatactcaagggggagcacccctagcaatgcgatagtaggcagcctga 2570 Query: 489 gttcttcccctgtcgcgagcgccaagaagctgca 522 | |||||||||| |||||||| ||||||||||| Sbjct: 2571 gcacttcccctgttgcgagcgcaaagaagctgca 2604 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 2062 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 2121 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 2122 gaccgacacactttcaagggcaggatc 2148
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 2e-58 Identities = 247/290 (85%) Strand = Plus / Minus Query: 218 aatggaaagagcgtcggattagacccaatgatggatgctttgcaatcaccttctagatgg 277 |||||||||||| ||||||| ||||| || || || || || ||||||||| ||||| Sbjct: 25992086 aatggaaagagcatcggattggacccgatcgagggtgtttctcagtcaccttctcgatgg 25992027 Query: 278 ccattggaatttgagaggaaacagcaggagatcatcgagctctggcacgcttgcagcatt 337 || |||||||| |||| ||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 25992026 cctttggaattcgagaagaagcagcaagagatcatcgagctttggcaagcttgcagcatt 25991967 Query: 338 tcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatt 397 || |||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||| Sbjct: 25991966 tccttggtccacaggacttactttttcttgctattcaagggagaagcagctgactcgatc 25991907 Query: 398 tacatggaagtggagcttcggaggctgttgttcctcagagacacctactccaggggaagc 457 |||||||||||||||||||| ||||| | ||||| ||||| || ||||| ||||| ||| Sbjct: 25991906 tacatggaagtggagcttcgaaggctatcattcctgagagatacatactcaagggggagc 25991847 Query: 458 acccccagcaacgtggtcgtaggcagcctcagttcttcccctgtcgcgag 507 ||||| ||||| | | | ||||||||||| ||| |||||||||| ||||| Sbjct: 25991846 acccctagcaatgcgatagtaggcagcctgagtacttcccctgttgcgag 25991797 Score = 234 bits (118), Expect = 2e-58 Identities = 247/290 (85%) Strand = Plus / Minus Query: 218 aatggaaagagcgtcggattagacccaatgatggatgctttgcaatcaccttctagatgg 277 |||||||||||| ||||||| ||||| || || || || || ||||||||| ||||| Sbjct: 25941919 aatggaaagagcatcggattggacccgatcgagggtgtttctcagtcaccttctcgatgg 25941860 Query: 278 ccattggaatttgagaggaaacagcaggagatcatcgagctctggcacgcttgcagcatt 337 || |||||||| |||| ||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 25941859 cctttggaattcgagaagaagcagcaagagatcatcgagctttggcaagcttgcagcatt 25941800 Query: 338 tcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatt 397 || |||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||| Sbjct: 25941799 tccttggtccacaggacttactttttcttgctattcaagggagaagcagctgactcgatc 25941740 Query: 398 tacatggaagtggagcttcggaggctgttgttcctcagagacacctactccaggggaagc 457 |||||||||||||||||||| ||||| | ||||| ||||| || ||||| ||||| ||| Sbjct: 25941739 tacatggaagtggagcttcgaaggctatcattcctgagagatacatactcaagggggagc 25941680 Query: 458 acccccagcaacgtggtcgtaggcagcctcagttcttcccctgtcgcgag 507 ||||| ||||| | | | ||||||||||| ||| |||||||||| ||||| Sbjct: 25941679 acccctagcaatgcgatagtaggcagcctgagtacttcccctgttgcgag 25941630 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 25992487 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 25992428 Query: 189 atcagaaacagttaggtgaccag 211 ||||||| ||||||||||||||| Sbjct: 25992427 atcagaagcagttaggtgaccag 25992405 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 25942320 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 25942261 Query: 189 atcagaaacagttaggtgaccag 211 ||||||| ||||||||||||||| Sbjct: 25942260 atcagaagcagttaggtgaccag 25942238 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 25992636 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 25992577 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 25992576 gaccgacacactttcaagggcaggatc 25992550 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 25942469 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 25942410 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 25942409 gaccgacacactttcaagggcaggatc 25942383
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 234 bits (118), Expect = 2e-58 Identities = 247/290 (85%) Strand = Plus / Minus Query: 218 aatggaaagagcgtcggattagacccaatgatggatgctttgcaatcaccttctagatgg 277 |||||||||||| ||||||| ||||| || || || || || ||||||||| ||||| Sbjct: 93260 aatggaaagagcatcggattggacccgatcgagggtgtttctcagtcaccttctcgatgg 93201 Query: 278 ccattggaatttgagaggaaacagcaggagatcatcgagctctggcacgcttgcagcatt 337 || |||||||| |||| ||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 93200 cctttggaattcgagaagaagcagcaagagatcatcgagctttggcaagcttgcagcatt 93141 Query: 338 tcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatt 397 || |||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||| Sbjct: 93140 tccttggtccacaggacttactttttcttgctattcaagggagaagcagctgactcgatc 93081 Query: 398 tacatggaagtggagcttcggaggctgttgttcctcagagacacctactccaggggaagc 457 |||||||||||||||||||| ||||| | ||||| ||||| || ||||| ||||| ||| Sbjct: 93080 tacatggaagtggagcttcgaaggctatcattcctgagagatacatactcaagggggagc 93021 Query: 458 acccccagcaacgtggtcgtaggcagcctcagttcttcccctgtcgcgag 507 ||||| ||||| | | | ||||||||||| ||| |||||||||| ||||| Sbjct: 93020 acccctagcaatgcgatagtaggcagcctgagtacttcccctgttgcgag 92971 Score = 161 bits (81), Expect = 3e-36 Identities = 153/177 (86%) Strand = Plus / Minus Query: 331 cagcatttcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccga 390 ||||||||| |||||||||||||| |||||||||||||| ||||| |||||| |||| || Sbjct: 143314 cagcatttccttggtccacaggacttactttttcttgctattcaagggagaagcagctga 143255 Query: 391 ctcgatttacatggaagtggagcttcggaggctgttgttcctcagagacacctactccag 450 |||||| |||||||||||||||||||| ||||| | ||||| ||||| || ||||| || Sbjct: 143254 ctcgatctacatggaagtggagcttcgaaggctatcattcctgagagatacatactcaag 143195 Query: 451 gggaagcacccccagcaacgtggtcgtaggcagcctcagttcttcccctgtcgcgag 507 ||| |||||||| ||||| | | | ||||||||||| ||| |||||||||| ||||| Sbjct: 143194 ggggagcacccctagcaatgcgatagtaggcagcctgagtacttcccctgttgcgag 143138 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 93661 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 93602 Query: 189 atcagaaacagttaggtgaccag 211 ||||||| ||||||||||||||| Sbjct: 93601 atcagaagcagttaggtgaccag 93579 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 93810 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 93751 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 93750 gaccgacacactttcaagggcaggatc 93724
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 234 bits (118), Expect = 2e-58 Identities = 247/290 (85%) Strand = Plus / Minus Query: 218 aatggaaagagcgtcggattagacccaatgatggatgctttgcaatcaccttctagatgg 277 |||||||||||| ||||||| ||||| || || || || || ||||||||| ||||| Sbjct: 55959 aatggaaagagcatcggattggacccgatcgagggtgtttctcagtcaccttctcgatgg 55900 Query: 278 ccattggaatttgagaggaaacagcaggagatcatcgagctctggcacgcttgcagcatt 337 || |||||||| |||| ||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 55899 cctttggaattcgagaagaagcagcaagagatcatcgagctttggcaagcttgcagcatt 55840 Query: 338 tcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatt 397 || |||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||| Sbjct: 55839 tccttggtccacaggacttactttttcttgctattcaagggagaagcagctgactcgatc 55780 Query: 398 tacatggaagtggagcttcggaggctgttgttcctcagagacacctactccaggggaagc 457 |||||||||||||||||||| ||||| | ||||| ||||| || ||||| ||||| ||| Sbjct: 55779 tacatggaagtggagcttcgaaggctatcattcctgagagatacatactcaagggggagc 55720 Query: 458 acccccagcaacgtggtcgtaggcagcctcagttcttcccctgtcgcgag 507 ||||| ||||| | | | ||||||||||| ||| |||||||||| ||||| Sbjct: 55719 acccctagcaatgcgatagtaggcagcctgagtacttcccctgttgcgag 55670 Score = 234 bits (118), Expect = 2e-58 Identities = 247/290 (85%) Strand = Plus / Minus Query: 218 aatggaaagagcgtcggattagacccaatgatggatgctttgcaatcaccttctagatgg 277 |||||||||||| ||||||| ||||| || || || || || ||||||||| ||||| Sbjct: 5792 aatggaaagagcatcggattggacccgatcgagggtgtttctcagtcaccttctcgatgg 5733 Query: 278 ccattggaatttgagaggaaacagcaggagatcatcgagctctggcacgcttgcagcatt 337 || |||||||| |||| ||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 5732 cctttggaattcgagaagaagcagcaagagatcatcgagctttggcaagcttgcagcatt 5673 Query: 338 tcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatt 397 || |||||||||||||| |||||||||||||| ||||| |||||| |||| |||||||| Sbjct: 5672 tccttggtccacaggacttactttttcttgctattcaagggagaagcagctgactcgatc 5613 Query: 398 tacatggaagtggagcttcggaggctgttgttcctcagagacacctactccaggggaagc 457 |||||||||||||||||||| ||||| | ||||| ||||| || ||||| ||||| ||| Sbjct: 5612 tacatggaagtggagcttcgaaggctatcattcctgagagatacatactcaagggggagc 5553 Query: 458 acccccagcaacgtggtcgtaggcagcctcagttcttcccctgtcgcgag 507 ||||| ||||| | | | ||||||||||| ||| |||||||||| ||||| Sbjct: 5552 acccctagcaatgcgatagtaggcagcctgagtacttcccctgttgcgag 5503 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 56360 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 56301 Query: 189 atcagaaacagttaggtgaccag 211 ||||||| ||||||||||||||| Sbjct: 56300 atcagaagcagttaggtgaccag 56278 Score = 101 bits (51), Expect = 2e-18 Identities = 75/83 (90%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 ||||||| || ||||| |||||||||||||||||||| || |||||||| || ||||||| Sbjct: 6193 cagaattcactggtattggtgaatttgttgctgaactcaaagagatggcccaggttcatt 6134 Query: 189 atcagaaacagttaggtgaccag 211 ||||||| ||||||||||||||| Sbjct: 6133 atcagaagcagttaggtgaccag 6111 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 56509 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 56450 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 56449 gaccgacacactttcaagggcaggatc 56423 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcagg 60 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 6342 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcaga 6283 Query: 61 gagtgagactccttcaagggcaggatc 87 || || || | ||||||||||||||| Sbjct: 6282 gaccgacacactttcaagggcaggatc 6256
>gb|AF272749.1|AF272749 Zea mays kinesin heavy chain (KIN1) mRNA, partial cds Length = 2565 Score = 198 bits (100), Expect = 1e-47 Identities = 229/272 (84%) Strand = Plus / Plus Query: 251 gatgctttgcaatcaccttctagatggccattggaatttgagaggaaacagcaggagatc 310 ||||||| |||||||||||| | |||||||| ||||| |||| ||||||||| |||||| Sbjct: 1711 gatgcttcacaatcaccttctcgctggccattagaattcgagaagaaacagcaagagatc 1770 Query: 311 atcgagctctggcacgcttgcagcatttcgttggtccacaggacatactttttcttgctc 370 |||| ||| |||||||| ||| | ||||| || ||||||||||| |||||||||||||| Sbjct: 1771 atcgggctttggcacgcgtgctgtatttccttagtccacaggacctactttttcttgcta 1830 Query: 371 ttcaaaggagaatcagccgactcgatttacatggaagtggagcttcggaggctgttgttc 430 ||||| |||||| ||| || || || ||||||||||||||||| |||||||| | ||| Sbjct: 1831 ttcaagggagaacaagctgattcaatctacatggaagtggagctccggaggctatcattc 1890 Query: 431 ctcagagacacctactccaggggaagcacccccagcaacgtggtcgtaggcagcctcagt 490 |||||||| |||||||| |||||| |||||| ||||| | ||| ||||||||| | | Sbjct: 1891 ctcagagatacctactctcggggaaacacccctagcaatgcggtggtaggcagcttgaac 1950 Query: 491 tcttcccctgtcgcgagcgccaagaagctgca 522 |||||||| | |||||||||||||||||||| Sbjct: 1951 tcttcccccgctgcgagcgccaagaagctgca 1982 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 125 gatgcagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagtt 184 |||||||| ||||| |||||||||||||||||||||||||| || ||||||||||| ||| Sbjct: 1570 gatgcagagtttactggtataggtgaatttgttgctgaactgaaagagatggctcaggtt 1629 Query: 185 cattatcagaaacagttagg 204 ||||| |||||||||||||| Sbjct: 1630 cattaccagaaacagttagg 1649
>gb|AF272759.1|AF272759 Zea mays kinesin heavy chain (KIN15) mRNA, partial cds Length = 2888 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 257 ttgcaatcaccttctagatggccattggaatttgagaggaaacagcaggagatcatcgag 316 ||||||||||||||| | ||||| |||||||| |||| |||||||||||||||||| || Sbjct: 2121 ttgcaatcaccttctcgctggcctttggaattcgagaagaaacagcaggagatcattgac 2180 Query: 317 ctctggcacgcttgcagcatttcgttggtccacaggacatactttttcttgctcttcaaa 376 || ||||| | |||| | |||| |||||||||||||| ||||||||| |||| |||||| Sbjct: 2181 ctgtggcatggatgcaacgtttccttggtccacaggacttactttttcctgctgttcaaa 2240 Query: 377 ggagaatcagccgactcgatttacatggaagtggagcttcggagg 421 || || |||||||| | ||||||||||||||||||||| ||||| Sbjct: 2241 ggggacccagccgacgccatttacatggaagtggagcttaggagg 2285
>gb|AY108256.1| Zea mays PCO127685 mRNA sequence Length = 1683 Score = 141 bits (71), Expect = 3e-30 Identities = 176/211 (83%) Strand = Plus / Plus Query: 248 atggatgctttgcaatcaccttctagatggccattggaatttgagaggaaacagcaggag 307 ||||||| ||||||||||||||| | ||||| |||||||| |||| ||||||||||||| Sbjct: 892 atggatgtcttgcaatcaccttctcgctggcctttggaattcgagaagaaacagcaggag 951 Query: 308 atcatcgagctctggcacgcttgcagcatttcgttggtccacaggacatactttttcttg 367 ||||| || || ||||| | |||| | |||| |||||||||||||| ||||| ||| || Sbjct: 952 atcattgacctgtggcatggatgcaacgtttccttggtccacaggacttacttcttcctg 1011 Query: 368 ctcttcaaaggagaatcagccgactcgatttacatggaagtggagcttcggaggctgttg 427 || |||||||| || |||||||| | ||||||||||||||||||||| ||||| | | | Sbjct: 1012 ctgttcaaaggggacccagccgacgccatttacatggaagtggagcttaggaggttatcg 1071 Query: 428 ttcctcagagacacctactccaggggaagca 458 || |||| | |||| ||||||| ||||||| Sbjct: 1072 tttctcaaaaacacatactccaacggaagca 1102
>ref|XM_473345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2748 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcga 395 |||| |||||||| ||||| || ||||||||||| ||||||||||| |||| || || | Sbjct: 2267 tttctttggtccataggacctattttttcttgctattcaaaggagacccagctgattcca 2326 Query: 396 tttacatggaagtggagcttcggaggct 423 |||||||||||||||| ||| ||||||| Sbjct: 2327 tttacatggaagtggaacttaggaggct 2354 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 |||||||||| || ||||||||||||||||||||||| || || ||||| || ||||| | Sbjct: 2042 cagaatttactggcataggtgaatttgttgctgaactgaaagaaatggcacaggttcagt 2101 Query: 189 atcagaa 195 ||||||| Sbjct: 2102 atcagaa 2108 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 29 agaagaggatctgcattaaactatgatgcagggagtgagactccttcaagggcagg 84 ||||| ||||||||| | ||||||||||||| ||| ||||| | ||||||||||| Sbjct: 1918 agaaggggatctgcactgaactatgatgcagagagcgagaccctatcaagggcagg 1973
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcga 395 |||| |||||||| ||||| || ||||||||||| ||||||||||| |||| || || | Sbjct: 157756 tttctttggtccataggacctattttttcttgctattcaaaggagacccagctgattcca 157697 Query: 396 tttacatggaagtggagcttcggaggct 423 |||||||||||||||| ||| ||||||| Sbjct: 157696 tttacatggaagtggaacttaggaggct 157669 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 |||||||||| || ||||||||||||||||||||||| || || ||||| || ||||| | Sbjct: 158182 cagaatttactggcataggtgaatttgttgctgaactgaaagaaatggcacaggttcagt 158123 Query: 189 atcagaa 195 ||||||| Sbjct: 158122 atcagaa 158116 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 29 agaagaggatctgcattaaactatgatgcagggagtgagactccttcaagggcagg 84 ||||| ||||||||| | ||||||||||||| ||| ||||| | ||||||||||| Sbjct: 158306 agaaggggatctgcactgaactatgatgcagagagcgagaccctatcaagggcagg 158251
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcga 395 |||| |||||||| ||||| || ||||||||||| ||||||||||| |||| || || | Sbjct: 4396 tttctttggtccataggacctattttttcttgctattcaaaggagacccagctgattcca 4337 Query: 396 tttacatggaagtggagcttcggaggct 423 |||||||||||||||| ||| ||||||| Sbjct: 4336 tttacatggaagtggaacttaggaggct 4309 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 |||||||||| || ||||||||||||||||||||||| || || ||||| || ||||| | Sbjct: 4822 cagaatttactggcataggtgaatttgttgctgaactgaaagaaatggcacaggttcagt 4763 Query: 189 atcagaa 195 ||||||| Sbjct: 4762 atcagaa 4756 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 29 agaagaggatctgcattaaactatgatgcagggagtgagactccttcaagggcagg 84 ||||| ||||||||| | ||||||||||||| ||| ||||| | ||||||||||| Sbjct: 4946 agaaggggatctgcactgaactatgatgcagagagcgagaccctatcaagggcagg 4891
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcga 395 |||| |||||||| ||||| || ||||||||||| ||||||||||| |||| || || | Sbjct: 26936696 tttctttggtccataggacctattttttcttgctattcaaaggagacccagctgattcca 26936637 Query: 396 tttacatggaagtggagcttcggaggct 423 |||||||||||||||| ||| ||||||| Sbjct: 26936636 tttacatggaagtggaacttaggaggct 26936609 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 |||||||||| || ||||||||||||||||||||||| || || ||||| || ||||| | Sbjct: 26937122 cagaatttactggcataggtgaatttgttgctgaactgaaagaaatggcacaggttcagt 26937063 Query: 189 atcagaa 195 ||||||| Sbjct: 26937062 atcagaa 26937056 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 29 agaagaggatctgcattaaactatgatgcagggagtgagactccttcaagggcagg 84 ||||| ||||||||| | ||||||||||||| ||| ||||| | ||||||||||| Sbjct: 26937246 agaaggggatctgcactgaactatgatgcagagagcgagaccctatcaagggcagg 26937191
>dbj|AK102262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088K23, full insert sequence Length = 3375 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcga 395 |||| |||||||| ||||| || ||||||||||| ||||||||||| |||| || || | Sbjct: 2639 tttctttggtccataggacctattttttcttgctattcaaaggagacccagctgattcca 2698 Query: 396 tttacatggaagtggagcttcggaggct 423 |||||||||||||||| ||| ||||||| Sbjct: 2699 tttacatggaagtggaacttaggaggct 2726 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 129 cagaatttaccggtataggtgaatttgttgctgaacttaaggagatggctcaagttcatt 188 |||||||||| || ||||||||||||||||||||||| || || ||||| || ||||| | Sbjct: 2414 cagaatttactggcataggtgaatttgttgctgaactgaaagaaatggcacaggttcagt 2473 Query: 189 atcagaa 195 ||||||| Sbjct: 2474 atcagaa 2480 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Plus Query: 29 agaagaggatctgcattaaactatgatgcagggagtgagactccttcaagggcagg 84 ||||| ||||||||| | ||||||||||||| ||| ||||| | ||||||||||| Sbjct: 2290 agaaggggatctgcactgaactatgatgcagagagcgagaccctatcaagggcagg 2345
>ref|NM_118549.1| Arabidopsis thaliana ATP binding / microtubule motor AT4G24170 mRNA, complete cds Length = 3015 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 341 ttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatttac 400 ||||| ||||| |||||||||||||||||||||||||| || || |||||| ||||| Sbjct: 2548 ttggttcacagaacatactttttcttgctcttcaaaggcgatccatccgactttgtttac 2607 Query: 401 atggaagt 408 |||||||| Sbjct: 2608 atggaagt 2615
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 341 ttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatttac 400 ||||| ||||| |||||||||||||||||||||||||| || || |||||| ||||| Sbjct: 70751 ttggttcacagaacatactttttcttgctcttcaaaggcgatccatccgactttgtttac 70810 Query: 401 atggaagt 408 |||||||| Sbjct: 70811 atggaagt 70818
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 341 ttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatttac 400 ||||| ||||| |||||||||||||||||||||||||| || || |||||| ||||| Sbjct: 14046 ttggttcacagaacatactttttcttgctcttcaaaggcgatccatccgactttgtttac 14105 Query: 401 atggaagt 408 |||||||| Sbjct: 14106 atggaagt 14113
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 341 ttggtccacaggacatactttttcttgctcttcaaaggagaatcagccgactcgatttac 400 ||||| ||||| |||||||||||||||||||||||||| || || |||||| ||||| Sbjct: 6817 ttggttcacagaacatactttttcttgctcttcaaaggcgatccatccgactttgtttac 6758 Query: 401 atggaagt 408 |||||||| Sbjct: 6757 atggaagt 6750
>ref|NM_120055.3| Arabidopsis thaliana ATP binding / microtubule motor AT4G38950 mRNA, complete cds Length = 2645 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 acatactttttcttgctcttcaaaggaga 381 |||||||||| |||||||||||||||||| Sbjct: 2038 acatacttttacttgctcttcaaaggaga 2066
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaact 165 |||||||||| | ||||||||||||||||||||||| Sbjct: 9910015 cagaatttactgtcataggtgaatttgttgctgaact 9909979
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 353 acatactttttcttgctcttcaaaggaga 381 |||||||||| |||||||||||||||||| Sbjct: 69323 acatacttttacttgctcttcaaaggaga 69295
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 353 acatactttttcttgctcttcaaaggaga 381 |||||||||| |||||||||||||||||| Sbjct: 31313 acatacttttacttgctcttcaaaggaga 31285
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaact 165 |||||||||| | ||||||||||||||||||||||| Sbjct: 9908136 cagaatttactgtcataggtgaatttgttgctgaact 9908100
>emb|BX826358.1|CNS0A47N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 353 acatactttttcttgctcttcaaaggaga 381 |||||||||| |||||||||||||||||| Sbjct: 737 acatacttttacttgctcttcaaaggaga 765
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 129 cagaatttaccggtataggtgaatttgttgctgaact 165 |||||||||| | ||||||||||||||||||||||| Sbjct: 72404 cagaatttactgtcataggtgaatttgttgctgaact 72368
>emb|AL049474.1|SPBC685 S.pombe chromosome II cosmid c685 Length = 13460 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 148 tgaatttgttgctgaacttaagga 171 |||||||||||||||||||||||| Sbjct: 12438 tgaatttgttgctgaacttaagga 12415
>ref|NM_001022062.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC685.10c), partial mRNA Length = 1107 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 148 tgaatttgttgctgaacttaagga 171 |||||||||||||||||||||||| Sbjct: 1023 tgaatttgttgctgaacttaagga 1046
>gb|AC149546.14| Medicago truncatula clone mth2-70o13, complete sequence Length = 124127 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaagg 378 |||| |||||||||||||| ||||||||| | || |||||||| Sbjct: 9464 tttcattggtccacaggacttactttttccttctattcaaagg 9422
>gb|AC174351.5| Medicago truncatula clone mth2-7h5, complete sequence Length = 109873 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 336 tttcgttggtccacaggacatactttttcttgctcttcaaagg 378 |||| |||||||||||||| ||||||||| | || |||||||| Sbjct: 76355 tttcattggtccacaggacttactttttccttctattcaaagg 76313
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 290 gagaggaaacagcaggagatcatcgagctctggca 324 ||||| || |||||||||||||||||||| ||||| Sbjct: 20357001 gagagaaagcagcaggagatcatcgagctgtggca 20357035
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 290 gagaggaaacagcaggagatcatcgagctctggca 324 ||||| || |||||||||||||||||||| ||||| Sbjct: 136128 gagagaaagcagcaggagatcatcgagctgtggca 136162
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 1 gttcccaggaagacctgaagagtaccagagaagaggatctgcattaaactatgatgcag 59 ||||||||||||||||| || | || ||||||||||||||| | |||||||||||| Sbjct: 82 gttcccaggaagacctgtggaatctcatagaagaggatctgcactgcactatgatgcag 24
>dbj|AK100918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F16, full insert sequence Length = 2959 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 290 gagaggaaacagcaggagatcatcgagctctggca 324 ||||| || |||||||||||||||||||| ||||| Sbjct: 2290 gagagaaagcagcaggagatcatcgagctgtggca 2324
>dbj|AK072633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134L05, full insert sequence Length = 2868 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 290 gagaggaaacagcaggagatcatcgagctctggca 324 ||||| || |||||||||||||||||||| ||||| Sbjct: 2187 gagagaaagcagcaggagatcatcgagctgtggca 2221
>dbj|AK060588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B11, full insert sequence Length = 1545 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 290 gagaggaaacagcaggagatcatcgagctctggca 324 ||||| || |||||||||||||||||||| ||||| Sbjct: 839 gagagaaagcagcaggagatcatcgagctgtggca 873
>emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on chromosome 13 Contains the 3' end of the ATP11A gene for ATPase Class VI type 11A, the 5' end of the MCF2L gene for a MCF.2 cell line derived transforming sequence-like gene, a novel gene and eight CpG islands, complete sequence Length = 170928 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 352 gacatactttttcttgctcttc 373 |||||||||||||||||||||| Sbjct: 80852 gacatactttttcttgctcttc 80873
>gb|AC157544.7| Mus musculus chromosome 8, clone RP23-271P20, complete sequence Length = 159843 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 355 atactttttcttgctcttcaaa 376 |||||||||||||||||||||| Sbjct: 146354 atactttttcttgctcttcaaa 146333
>dbj|AB125884.1| Ipomoea batatas SRF5 mRNA for kinesin heavy chain-like protein, partial cds Length = 1686 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 345 tccacaggacatactttttcttgctcttcaaagg 378 |||||||||||||||||||| |||| || ||||| Sbjct: 1540 tccacaggacatactttttcctgctgtttaaagg 1573
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 aggcagcctcagttcttcccc 498 ||||||||||||||||||||| Sbjct: 22954 aggcagcctcagttcttcccc 22934
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 aggcagcctcagttcttcccc 498 ||||||||||||||||||||| Sbjct: 167797 aggcagcctcagttcttcccc 167777
>emb|BX571828.6| Zebrafish DNA sequence from clone DKEY-281I15 in linkage group 22, complete sequence Length = 212429 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 tttgagaggaaacagcaggag 307 ||||||||||||||||||||| Sbjct: 150099 tttgagaggaaacagcaggag 150079
>emb|CR938715.18| Zebrafish DNA sequence from clone DKEY-176G3 in linkage group 18, complete sequence Length = 36681 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 tttgagaggaaacagcaggag 307 ||||||||||||||||||||| Sbjct: 5526 tttgagaggaaacagcaggag 5506
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 338 tcgttggtccacaggacatactttttcttgctcttca 374 ||||| || ||||| |||||||| ||||||||||||| Sbjct: 15537 tcgttagtgcacagaacatacttcttcttgctcttca 15501
>gb|BC028734.1| Homo sapiens arylacetamide deacetylase-like 1, mRNA (cDNA clone MGC:33503 IMAGE:4815834), complete cds Length = 4336 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 3854 ctcaagtacattatcagaaacagt 3831
>gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosome 16, complete sequence Length = 190523 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttcccaggaagacctgaaga 21 |||||||||||||||||||| Sbjct: 12693 ttcccaggaagacctgaaga 12674
>gb|BC007483.1| Mus musculus growth factor receptor bound protein 2-associated protein 1, mRNA (cDNA clone MGC:7657 IMAGE:3495926), complete cds Length = 4877 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 2886 cctgaagagtaccagagaag 2905
>ref|NM_021356.2| Mus musculus growth factor receptor bound protein 2-associated protein 1 (Gab1), mRNA Length = 4877 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 2886 cctgaagagtaccagagaag 2905
>ref|NM_020792.3| Homo sapiens arylacetamide deacetylase-like 1 (AADACL1), mRNA Length = 4289 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 3847 ctcaagtacattatcagaaacagt 3824
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete sequence Length = 145012 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gttgttcctcagagacacct 443 |||||||||||||||||||| Sbjct: 1578 gttgttcctcagagacacct 1597
>gb|AC125187.4| Mus musculus BAC clone RP23-302N11 from chromosome 7, complete sequence Length = 247402 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tccaggggaagcacccccag 465 |||||||||||||||||||| Sbjct: 187941 tccaggggaagcacccccag 187960
>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete sequence Length = 140103 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gttgttcctcagagacacct 443 |||||||||||||||||||| Sbjct: 41159 gttgttcctcagagacacct 41140
>emb|CT010264.1| Mus musculus full open reading frame cDNA clone RZPDo836F0451D for gene Gab1, RIKEN cDNA 1700019H22 gene; complete cds, incl. stopcodon Length = 2088 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 2010 cctgaagagtaccagagaag 2029
>gb|AC006970.6| Homo sapiens PAC clone RP4-725G10 from 7, complete sequence Length = 136098 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 tttttcttgctcttcaaaggagaa 382 |||||||| ||||||||||||||| Sbjct: 93131 tttttctttctcttcaaaggagaa 93154
>gb|BC047588.1| Homo sapiens arylacetamide deacetylase-like 1, mRNA (cDNA clone IMAGE:5260691), partial cds Length = 4150 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 3698 ctcaagtacattatcagaaacagt 3675
>emb|AL158072.9| Human DNA sequence from clone RP11-30O14 on chromosome 9p21.1-21.3, complete sequence Length = 200840 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tggaatttgagaggaaacag 301 |||||||||||||||||||| Sbjct: 13791 tggaatttgagaggaaacag 13772
>emb|Z69795.1|SPAC17G8 S.pombe chromosome I cosmid c17G8 Length = 26689 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcaggtgatgcagaatttac 138 |||||||||||||||||||| Sbjct: 12728 gcaggtgatgcagaatttac 12709
>emb|AJ250669.1|MMU250669 Mus musculus gab1 gene for GRB2-associated binding protein 1 Length = 2620 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 2033 cctgaagagtaccagagaag 2052
>gb|BC099809.1| Rattus norvegicus cDNA clone MGC:124774 IMAGE:5621894, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 accagagaagaggatctgca 43 |||||||||||||||||||| Sbjct: 709 accagagaagaggatctgca 728
>emb|AL512752.1|HSM802898 Homo sapiens mRNA; cDNA DKFZp667N145 (from clone DKFZp667N145) Length = 2409 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 1963 ctcaagtacattatcagaaacagt 1940
>gb|AC007051.3| Homo sapiens chromosome 3, clone hRPK.44_A_1, complete sequence Length = 167810 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 24246 ctcaagtacattatcagaaacagt 24223
>dbj|AK132176.1| Mus musculus 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3321404B21 product:growth factor receptor bound protein 2-associated protein 1, full insert sequence Length = 4986 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 3017 cctgaagagtaccagagaag 3036
>dbj|AK155423.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630226D05 product:growth factor receptor bound protein 2-associated protein 1, full insert sequence Length = 4864 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 2897 cctgaagagtaccagagaag 2916
>gb|BC094659.1| Mus musculus growth factor receptor bound protein 2-associated protein 1, mRNA (cDNA clone MGC:102051 IMAGE:6854020), complete cds Length = 4239 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 2237 cctgaagagtaccagagaag 2256
>gb|AC139530.3| Homo sapiens chromosome 17, clone RP13-1032I1, complete sequence Length = 159125 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gaagggagctagcaaggcag 122 |||||||||||||||||||| Sbjct: 120952 gaagggagctagcaaggcag 120971
>gb|AC007919.18| Homo sapiens 3 BAC RP11-408H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184989 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 111883 ctcaagtacattatcagaaacagt 111906
>ref|XM_574284.1| PREDICTED: Rattus norvegicus similar to tumor protein D53 (LOC498994), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 accagagaagaggatctgca 43 |||||||||||||||||||| Sbjct: 1264 accagagaagaggatctgca 1283
>emb|BX005463.5| Zebrafish DNA sequence from clone CH211-177H19 in linkage group 6, complete sequence Length = 163804 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cggtataggtgaatttgttg 158 |||||||||||||||||||| Sbjct: 83157 cggtataggtgaatttgttg 83138
>gb|AC137896.5| Homo sapiens chromosome 17, clone RP11-765O14, complete sequence Length = 107289 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gaagggagctagcaaggcag 122 |||||||||||||||||||| Sbjct: 103444 gaagggagctagcaaggcag 103425
>gb|AC132606.3| Mus musculus BAC clone RP23-434H18 from 8, complete sequence Length = 215743 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctgaagagtaccagagaag 33 |||||||||||||||||||| Sbjct: 89869 cctgaagagtaccagagaag 89888
>dbj|AB037784.1| Homo sapiens mRNA for KIAA1363 protein, partial cds Length = 4116 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 ctcaagttcattatcagaaacagt 200 ||||||| |||||||||||||||| Sbjct: 3686 ctcaagtacattatcagaaacagt 3663 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,867,028 Number of Sequences: 3902068 Number of extensions: 4867028 Number of successful extensions: 91748 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 91516 Number of HSP's gapped (non-prelim): 224 length of query: 522 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 499 effective length of database: 17,143,297,704 effective search space: 8554505554296 effective search space used: 8554505554296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)