Clone Information

BLAST Search Result

Clone Name	bart32e01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ...	354	1e-97
2	VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ...	307	2e-83
3	VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein...	260	2e-69
4	VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein...	252	6e-67
5	VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol...	249	3e-66
6	VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta...	236	5e-62
7	VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ...	229	3e-60
8	VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ...	218	1e-56
9	VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (P...	68	2e-11
10	VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel p...	65	1e-10
11	VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective c...	64	4e-10
12	VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel p...	59	8e-09
13	VDAC2_MOUSE (Q60930) Voltage-dependent anion-selective channel p...	58	2e-08
14	VDAC2_PIG (Q9MZ15) Voltage-dependent anion-selective channel pro...	56	9e-08
15	VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin	55	1e-07
16	VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel p...	53	6e-07
17	VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel pro...	52	1e-06
18	VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel pro...	52	1e-06
19	VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel p...	52	1e-06
20	VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel p...	52	1e-06
21	VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel p...	51	2e-06
22	VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protei...	50	6e-06
23	VDAC1_YEAST (P04840) Outer mitochondrial membrane protein porin ...	41	0.003
24	VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin ...	38	0.019
25	VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin (...	35	0.21
26	POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N...	33	0.80
27	METK_HELPY (P56460) S-adenosylmethionine synthetase (EC 2.5.1.6)...	32	1.4
28	COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)	32	1.8
29	POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein ...	32	1.8
30	LEU2_MYCSM (Q938C9) 3-isopropylmalate dehydratase large subunit ...	32	1.8
31	SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding fact...	30	4.0
32	Y4SI_RHISN (P55652) Probable chemoreceptor y4sI (Methyl-acceptin...	30	4.0
33	FLID_BACHD (Q9K6W0) Flagellar hook-associated protein 2 (HAP2) (...	30	4.0
34	LEU2_CAMJR (Q5HS78) 3-isopropylmalate dehydratase large subunit ...	30	5.2
35	RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding f...	30	5.2
36	METK_HELPJ (Q9ZMN5) S-adenosylmethionine synthetase (EC 2.5.1.6)...	30	5.2
37	GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5)...	30	5.2
38	KCC2B_HUMAN (Q13554) Calcium/calmodulin-dependent protein kinase...	30	6.7
39	LEU2_CAMJE (Q9PLW1) 3-isopropylmalate dehydratase large subunit ...	29	8.8
40	TBP2_HAEIN (P44971) Probable transferrin-binding protein 2 precu...	29	8.8

>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score =  354 bits (908), Expect = 1e-97
 Identities = 180/188 (95%), Positives = 182/188 (96%)
 Frame = +3

Query: 21  MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIK 200
           MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANG AITATSTKKADL +GEIQSQIK
Sbjct: 1   MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIK 60

Query: 201 NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 380
           NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS
Sbjct: 61  NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINAS 120

Query: 381 IGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGD 560
           IGLTANPVVNLS AFGTSALAVG DVSLDT+TKNF KYNAA SYTNQDLIASLNLNNKGD
Sbjct: 121 IGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGD 180

Query: 561 SLTASYYH 584
           SLTASYYH
Sbjct: 181 SLTASYYH 188

to top

>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score =  307 bits (786), Expect = 2e-83
 Identities = 154/186 (82%), Positives = 168/186 (90%)
 Frame = +3

Query: 27  GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 206
           GPGLY  IGKKA+DLLYRDYQTDHKFTLTTYT+NG AITATSTKKADLI GEIQSQIKNK
Sbjct: 2   GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNK 61

Query: 207 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 386
           NITVDVKANS SNV+TT+T D+L  PGLK+ILSFAVPDQ+SGK ELQY HDYAG++ASIG
Sbjct: 62  NITVDVKANSDSNVVTTVTVDELT-PGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIG 120

Query: 387 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL 566
           LTA+PVVNLS+ FGT ALAVG DVSLDT+T N TKYNA  S++N DLIASLNLNNKGDSL
Sbjct: 121 LTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSL 180

Query: 567 TASYYH 584
           TASYYH
Sbjct: 181 TASYYH 186

to top

>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score =  260 bits (664), Expect = 2e-69
 Identities = 122/186 (65%), Positives = 154/186 (82%)
 Frame = +3

Query: 27  GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 206
           GPGLY+ IGKKA+DLLY+DYQ+DHKF++TTY+  G  IT++ +KK DL L ++ +Q+KNK
Sbjct: 3   GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNK 62

Query: 207 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 386
           N+T D+K ++ SN+ TTIT D+ AAPGLKTILSF VPDQ+SGK+E+QYLHDYAGI  S+G
Sbjct: 63  NVTTDIKVDTNSNLFTTITVDE-AAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVG 121

Query: 387 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL 566
           LTANP+VN S   GT+ +A+G DVS DT T +FTK NA  S+TN DL+ASLNLNNKGD+L
Sbjct: 122 LTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNL 181

Query: 567 TASYYH 584
           TASYYH
Sbjct: 182 TASYYH 187

to top

>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score =  252 bits (643), Expect = 6e-67
 Identities = 123/186 (66%), Positives = 151/186 (81%)
 Frame = +3

Query: 27  GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 206
           GPGLYS IGKKA+DLLYRDY +DHKFT+TTY+  G AITA+  KK +L L ++ +Q+KNK
Sbjct: 3   GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNK 62

Query: 207 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 386
           NIT DVK ++ SNV TTIT D+  APGLKTI SF VPDQKSGKVELQYLH+YAGIN SIG
Sbjct: 63  NITTDVKVDTNSNVYTTITVDE-PAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIG 121

Query: 387 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL 566
           LTA+P+VN S   G + +A+G D+S DT+T NFTK NA  S+++ DLIASL LN+KGD++
Sbjct: 122 LTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTV 181

Query: 567 TASYYH 584
           +ASYYH
Sbjct: 182 SASYYH 187

to top

>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score =  249 bits (637), Expect = 3e-66
 Identities = 119/184 (64%), Positives = 149/184 (80%)
 Frame = +3

Query: 33  GLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNI 212
           GLY+ IGKK +DLLY+DY T  KF LTT + NG AITA  T+K + I GE+ +QIKNK +
Sbjct: 6   GLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKL 65

Query: 213 TVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLT 392
           TVDVKANS S+++TTIT D+   PGLK+I++  VPDQ+SGK+E QYLH+YAG+NAS+GL 
Sbjct: 66  TVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLN 125

Query: 393 ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSLTA 572
           +NP+VNLS AFG+ AL+VG DVS DT+T +FTKYNAA S T+ DLIASL+LNN GD+L A
Sbjct: 126 SNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVA 185

Query: 573 SYYH 584
           SYYH
Sbjct: 186 SYYH 189

to top

>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score =  236 bits (601), Expect = 5e-62
 Identities = 112/186 (60%), Positives = 145/186 (77%)
 Frame = +3

Query: 27  GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 206
           GPGLY+ IGKKA+DLLY+DY +D KFT++TY+  G AIT++ TKK +L LG++ +Q+KNK
Sbjct: 3   GPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNK 62

Query: 207 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 386
           NIT D+K ++ SN+ TTIT ++  APG+K ILSF VP+Q SGKVELQYLH+YAGI++S+G
Sbjct: 63  NITTDIKVDTNSNLFTTITVNE-PAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVG 121

Query: 387 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL 566
           L ANP+VN S+  GT+ALA G D+S DT     TK NAA ++   DLI SL LN KGD L
Sbjct: 122 LKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLL 181

Query: 567 TASYYH 584
           +ASYYH
Sbjct: 182 SASYYH 187

to top

>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score =  229 bits (585), Expect = 3e-60
 Identities = 112/186 (60%), Positives = 142/186 (76%)
 Frame = +3

Query: 27  GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 206
           GPGLY+ IGKKA+DLLY+D+ +D KF++TT++  G AIT+T TKK DL+LG++  Q + K
Sbjct: 3   GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRK 62

Query: 207 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 386
           NIT D+K  + S  + T T D+ AAPGL++I SF VPDQ SGKVELQYLH+YAGI+ S+G
Sbjct: 63  NITTDLKVCTDSTFLITATVDE-AAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMG 121

Query: 387 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL 566
           LT NP VN S   G++ LAVG DVS DT + NFTK NA  S+T +DLIASL +N+KGD L
Sbjct: 122 LTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLL 181

Query: 567 TASYYH 584
            ASYYH
Sbjct: 182 NASYYH 187

to top

>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score =  218 bits (555), Expect = 1e-56
 Identities = 103/185 (55%), Positives = 137/185 (74%)
 Frame = +3

Query: 27  GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK 206
           GPGLY+ IGKKA+DLLYRDYQ D KF++TTY++ G AIT T T K  L LG++ +Q+KN 
Sbjct: 3   GPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNN 62

Query: 207 NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIG 386
           N T DVK ++ S+++TT+T D+  APGLK I+   +PD KSGK E+QY HDYAGI+ S+G
Sbjct: 63  NFTADVKVSTDSSLLTTLTFDE-PAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVG 121

Query: 387 LTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNKGDSL 566
            TA P+VN S   GT+ L++G DV+ +T + NF  +NA F++T  DL ASL LN+KG+ L
Sbjct: 122 FTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKL 181

Query: 567 TASYY 581
            ASYY
Sbjct: 182 NASYY 186

to top

>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)|
          Length = 281

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITAT--STKKADLILGEIQS--Q 194
           P  YS +GK+A+D+  + Y     K  L T T++G        S +++  + G +++  +
Sbjct: 2   PPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYK 61

Query: 195 IKNKNITVDVKANSASNVITTITADDLAAPGLKTIL--SFAVPD-QKSGKVELQYLHDYA 365
           +K+  +T+  K N+ + + T +   D    GLK  L  +FA     K+GK ++ Y H+  
Sbjct: 62  VKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENV 121

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
             ++ + +    P++N SA  G      G   + DT     T  N A  YT +D +    
Sbjct: 122 KADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTA 181

Query: 543 LNNKGDSLTASYY 581
           +N+ G   + S +
Sbjct: 182 VND-GQEFSGSIF 193

to top

>VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel protein 2 (Outer|
           mitochondrial membrane protein porin)
          Length = 282

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKAD--LILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  + T +A G   T + T   D   + G ++++ K
Sbjct: 3   PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKYK 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 365
                +T   K N+ + + T I  +D  A GLK            +KSGKV+  Y  +Y 
Sbjct: 63  WGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEYV 122

Query: 366 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P ++ SA  G      G  ++ D++    TK N A  Y   D     N
Sbjct: 123 NLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GSEFAGSIY 194

to top

>VDAC_CAEEL (Q21752) Probable voltage-dependent anion-selective channel|
          Length = 283

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTDH-KFTLTTYTANGAAITATSTKKADLILG------EIQ 188
           P  ++ +GK AKDL  + Y     K   TT   +   +   S    ++  G      +++
Sbjct: 3   PPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLDVK 62

Query: 189 SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTIL-SFAVPD--QKSGKVELQYLHD 359
            +I    IT+  K N+ + + T I  ++    GLK  L S   P   ++SGKV+L +   
Sbjct: 63  YKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWALP 122

Query: 360 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSY-TNQDLIAS 536
            A + A +G+T+ PV+N +  F      +G   + D+S+      + AF + T Q  + S
Sbjct: 123 TARVTADVGVTSAPVINAAGVFSRDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHS 182

Query: 537 LNLNNKGDSLTASYYH 584
             +N+      AS YH
Sbjct: 183 FVINS--TDFGASLYH 196

to top

>VDAC2_MELGA (P82013) Voltage-dependent anion-selective channel protein 2|
           (VDAC-2) (Outer mitochondrial membrane protein porin 2)
          Length = 282

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  + T +A+G   T + +   D   + G ++++ K
Sbjct: 3   PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYK 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQYLHDYA 365
                +T   K N+ + + T I  +D  A GLK            +KSGK++  Y  +  
Sbjct: 63  WAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKRECL 122

Query: 366 GINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P ++ SA FG      G  ++ D++    T+ N +  Y   D     N
Sbjct: 123 NLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFSVGYKTGDFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GSEFGGSIY 194

to top

>VDAC2_MOUSE (Q60930) Voltage-dependent anion-selective channel protein 2|
           (VDAC-2) (mVDAC2) (mVDAC6) (Outer mitochondrial membrane
           protein porin 2)
          Length = 295

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 9/202 (4%)
 Frame = +3

Query: 3   PSSPAEMGGPGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--I 173
           P  P  M  P  Y+ +GK A+D+  + +     K  + T + +G   + + +   D   +
Sbjct: 7   PVCPRPMCIPPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKV 66

Query: 174 LGEIQSQIK--NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKV 338
            G ++++ K     +T   K N+ + + T I  +D    GLK            +KSGK+
Sbjct: 67  SGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKI 126

Query: 339 ELQYLHDYAGINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYT 515
           +  Y  +   +   +    A P ++ SA FG      G  ++ D++    T+ N A  Y 
Sbjct: 127 KSAYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYR 186

Query: 516 NQDLIASLNLNNKGDSLTASYY 581
             D     N+NN G     S Y
Sbjct: 187 TGDFQLHTNVNN-GTEFGGSIY 207

to top

>VDAC2_PIG (Q9MZ15) Voltage-dependent anion-selective channel protein 2|
          Length = 294

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
 Frame = +3

Query: 12  PAEMGGPGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGE 182
           P  M  P  Y+ +GK A+D+  + +     K  + T + +G   + + +   D   + G 
Sbjct: 9   PRPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGT 68

Query: 183 IQSQIK--NKNITVDVKANSASNVITTITADDLAAPGLKTILSFAV---PDQKSGKVELQ 347
           ++++ K     +T   K N+ + + T I  +D    GLK            +KSGK++  
Sbjct: 69  LETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSS 128

Query: 348 YLHDYAGINASIGLT-ANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQD 524
           Y  +   +   +    A P ++ SA FG      G  ++ D++    T+ N A  Y   D
Sbjct: 129 YKRECVNLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGD 188

Query: 525 LIASLNLNNKGDSLTASYY 581
                N+N+ G     S Y
Sbjct: 189 FQLHTNVND-GTEFGGSIY 206

to top

>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin|
          Length = 283

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 50/190 (26%), Positives = 74/190 (38%), Gaps = 8/190 (4%)
 Frame = +3

Query: 39  YSGIGKKAKDLLYRDYQTDHKFTLT--TYTANGAAITATSTKKADLIL-GEIQSQIKNK- 206
           +S I K A DLL +D+      T+   + T N  A   T     D +  G ++ +  +K 
Sbjct: 6   FSDIAKSANDLLNKDFYHLAAGTIEVKSNTPNNVAFKVTGKSTHDKVTSGALEGKFTDKP 65

Query: 207 -NITVDVKANSASNVITTITADDLAAPGLKT--ILSFA-VPDQKSGKVELQYLHDYAGIN 374
             +TV    N+A+ + T +   D  A GLK   I SF    + +  K  L +        
Sbjct: 66  NGLTVTQTWNTANALETKVEMADNLAKGLKAEGIFSFLPATNARGAKFNLHFKQSNFHGR 125

Query: 375 ASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNK 554
           A   L   P  N+ A  G      G     D      T Y+AA  Y      A++   + 
Sbjct: 126 AFFDLLKGPTANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVGYHAPTYSAAITATDN 185

Query: 555 GDSLTASYYH 584
               +ASYYH
Sbjct: 186 LSVFSASYYH 195

to top

>VDAC1_MOUSE (Q60932) Voltage-dependent anion-selective channel protein 1|
           (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane
           protein porin 1) (Plasmalemmal porin)
          Length = 296

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
 Frame = +3

Query: 21  MGGPGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQS 191
           M  P  Y+ +GK A+D+  + Y     K  L T + NG   T++ +   +   + G +++
Sbjct: 14  MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLET 73

Query: 192 QIK--NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLH 356
           + +     +T   K N+ + + T IT +D  A GLK T  S   P+  +K+ K++  Y  
Sbjct: 74  KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 133

Query: 357 DYAGINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIA 533
           ++  +   +    A P +  +   G      G  ++ +TS    T+ N A  Y   +   
Sbjct: 134 EHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQL 193

Query: 534 SLNLNNKGDSLTASYY 581
             N+N+ G     S Y
Sbjct: 194 HTNVND-GTEFGGSIY 208

to top

>VDAC1_RAT (Q9Z2L0) Voltage-dependent anion-selective channel protein 1|
           (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein
           porin 1)
          Length = 282

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  L T + NG   T++ +   +   + G ++++ +
Sbjct: 3   PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYR 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 365
                +T   K N+ + + T IT +D  A GLK T  S   P+  +K+ K++  Y  ++ 
Sbjct: 63  WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P +  +   G      G  ++ +TS    T+ N A  Y   +     N
Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GTEFGGSIY 194

to top

>VDAC1_PIG (Q9MZ16) Voltage-dependent anion-selective channel protein 1|
           (VDAC-1)
          Length = 282

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  L T + NG   T++ +   +   + G ++++ +
Sbjct: 3   PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 365
                +T   K N+ + + T IT +D  A GLK T  S   P+  +K+ K++  Y  ++ 
Sbjct: 63  WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHV 122

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P +  +   G      G  ++ +T+    T+ N A  Y   +     N
Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GTEFGGSIY 194

to top

>VDAC1_RABIT (Q9TT15) Voltage-dependent anion-selective channel protein 1|
           (VDAC-1) (Outer mitochondrial membrane protein porin 1)
          Length = 282

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  L T + NG   T++ +   +   + G ++++ +
Sbjct: 3   PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 365
                +T   K N+ + + T IT +D  A GLK T  S   P+  +K+ K++  Y  ++ 
Sbjct: 63  WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P +  +   G      G  ++ +T+    T+ N A  Y   +     N
Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GTEFGGSIY 194

to top

>VDAC1_BOVIN (P45879) Voltage-dependent anion-selective channel protein 1|
           (VDAC-1) (Plasmalemmal porin) (Brain-derived
           voltage-dependent anion channel 1) (BR1-VDAC)
          Length = 282

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  L T + NG   T++ +   +   + G ++++ +
Sbjct: 3   PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 365
                +T   K N+ + + T IT +D  A GLK T  S   P+  +K+ K++  Y  ++ 
Sbjct: 63  WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P +  +   G      G  ++ +T+    T+ N A  Y   +     N
Sbjct: 123 NLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GTEFGGSIY 194

to top

>VDAC1_HUMAN (P21796) Voltage-dependent anion-selective channel protein 1|
           (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein
           porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM)
          Length = 282

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTD-HKFTLTTYTANGAAITATSTKKADL--ILGEIQSQIK 200
           P  Y+ +GK A+D+  + Y     K  L T + NG   T++ +   +   + G ++++ +
Sbjct: 3   PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYR 62

Query: 201 --NKNITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPD--QKSGKVELQYLHDYA 365
                +T   K N+ + + T IT +D  A GLK T  S   P+  +K+ K++  Y  ++ 
Sbjct: 63  WTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHI 122

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
            +   +    A P +  +   G      G  ++ +T+    T+ N A  Y   +     N
Sbjct: 123 NLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTN 182

Query: 543 LNNKGDSLTASYY 581
           +N+ G     S Y
Sbjct: 183 VND-GTEFGGSIY 194

to top

>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin|
          Length = 282

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 7/192 (3%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTA-NGAAITATSTKKAD-LILGEIQSQIKN 203
           P  Y+ I K   DLL RD+           TA NG     +  + A  +I G++++   +
Sbjct: 3   PPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFNVSGNQDAKGVISGKLETSFND 62

Query: 204 K--NITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGK---VELQYLHDYAG 368
           K   +T+     +A+ + + +   +  APGL   ++       + K   + L++ H    
Sbjct: 63  KANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIH 122

Query: 369 INASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLN 548
            +AS+       +      G      G +   D    N + Y A   Y    L  +L  +
Sbjct: 123 THASVNALERKFLG-DFTVGHEGFLAGAEFGYDVQKGNVSNYAATIGYLASPLSVALQAS 181

Query: 549 NKGDSLTASYYH 584
           N      ASYYH
Sbjct: 182 NNLSVFRASYYH 193

to top

>VDAC1_YEAST (P04840) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 282

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 9/184 (4%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDY--QTDHKFTLTTYTANGA--AITATSTKKADLILGEIQSQI 197
           P +YS I +   DLL +D+   T   F + T TANG   ++ A    K   +   +++++
Sbjct: 2   PPVYSDISRNINDLLNKDFYHATPAAFDVQTTTANGIKFSLKAKQPVKDGPLSTNVEAKL 61

Query: 198 KNKNITVDVKA--NSASNVITTITADDLAAPGLKT--ILSFAVPDQKSGKVELQYLHDYA 365
            +K   + +    ++ +N+ T +   +L  PGLK   I S      KS  +   +   + 
Sbjct: 62  NDKQTGLGLTQGWSNTNNLQTKLEFANL-TPGLKNELITSLTPGVAKSAVLNTTFTQPFF 120

Query: 366 GINASIGL-TANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLN 542
               +  L   +P            +  G +   D S  + ++Y  A SY  +D      
Sbjct: 121 TARGAFDLCLKSPTFVGDLTMAHEGIVGGAEFGYDISAGSISRYAMALSYFAKDYSLGAT 180

Query: 543 LNNK 554
           LNN+
Sbjct: 181 LNNE 184

to top

>VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 281

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 8/189 (4%)
 Frame = +3

Query: 39  YSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNK---- 206
           ++ I +    L  RD+   +  +L   T     +  T   K  +  G IQ+ ++ +    
Sbjct: 6   FNDISRDVNGLFNRDFFHTNPLSLNISTTTENGVNFTLKAKQGVTEGPIQTSVEGRFYDR 65

Query: 207 --NITVDVKANSASNVITTITADDLAAPGLK-TILSFAVPDQ-KSGKVELQYLHDYAGIN 374
              +++    ++ + + T I    +A PG K  + +F  P   K+ K  L Y        
Sbjct: 66  KEGVSLSQSWSNQNRLNTRIEFSKIA-PGWKGDVNAFLTPQSIKNAKFNLSYAQKSFAAR 124

Query: 375 ASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAAFSYTNQDLIASLNLNNK 554
            SI +        S   G      G D++ DT+     +Y  +  Y  ++    L+ NN+
Sbjct: 125 TSIDILQPKDFVGSVTLGHRGFVGGTDIAYDTAAGLCARYAMSIGYLAREYSFILSTNNR 184

Query: 555 GDSLTASYY 581
               TAS++
Sbjct: 185 -QCATASFF 192

to top

>VDAC_DICDI (Q01501) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 38/148 (25%), Positives = 56/148 (37%), Gaps = 20/148 (13%)
 Frame = +3

Query: 30  PGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQ------- 188
           PGLY+ + K   D + +D+    K   TT+     +I A +  K   ++  IQ       
Sbjct: 3   PGLYADLTKPTADFIKKDFAETFKLD-TTFKGKYGSIVAVTDIKDSGVVASIQPKADFTK 61

Query: 189 --SQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSG-KVELQYL-- 353
              ++ N N TVD   N       TI   +   PGLK +   A  D K     E QY   
Sbjct: 62  YLGKVSNGNFTVD--TNGVKKGEFTI---ENIIPGLKAV---ANGDSKQNFSTEFQYKKD 113

Query: 354 --------HDYAGINASIGLTANPVVNL 413
                   H+    N S+    NP  ++
Sbjct: 114 KIAFTLFGHNNKSFNTSLAFLINPTFSV 141

to top

>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral geno
          Length = 3054

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
 Frame = +3

Query: 39   YSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITA--TSTKKADLILGEIQSQIKNK-N 209
            Y+ +    K L+ + Y+   K    T  + G  I    TS KK  ++   I   I+N   
Sbjct: 1420 YNDVDSLGKLLVQKGYKVS-KIDGRTMKSGGTEIITEGTSVKKHFIVATNI---IENGVT 1475

Query: 210  ITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGL 389
            I +DV  +  + V+  +  D+ A    KT++S+    QK G+V         G+   IG 
Sbjct: 1476 IDIDVVVDFGTKVVPVLDVDNRAVQYNKTVVSYGERIQKLGRVG----RHKEGVALRIGQ 1531

Query: 390  TANPVVNLSAAFGTSA 437
            T   +V +     T A
Sbjct: 1532 TNKTLVEIPEMVATEA 1547

to top

>METK_HELPY (P56460) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 385

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
 Frame = +3

Query: 360 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAA---------FSY 512
           YA    +  L A+ V + +      A+ V   VS+  +T N +KY++A         F  
Sbjct: 277 YAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKYSSAELEKCVKSVFKL 336

Query: 513 TNQDLIASLNLNNKGDSLTASYYHF 587
           T + +I SL+L     SLT++Y HF
Sbjct: 337 TPKGIIESLDLLRPIYSLTSAYGHF 361

to top

>COAT_TRSV (Q88894) Coat protein precursor (Capsid protein)|
          Length = 515

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
 Frame = +3

Query: 315 PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 440
           PD  +G V      Y+HD+A  +A++ L +NP+  L AA G                 A 
Sbjct: 367 PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWSRSKQAQ 426

Query: 441 AVGGDVSLDTSTKNFTKY 494
           A  G VS+ T+ +++  Y
Sbjct: 427 AQEGSVSITTNYRDWGAY 444

to top

>POL2_TRSV (Q6UR06) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement|
            protein (2B-MP); Coat protein (2C-CP)]
          Length = 1101

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
 Frame = +3

Query: 315  PDQKSGKVELQ---YLHDYAGINASIGLTANPVVNLSAAFG---------------TSAL 440
            PD  +G V      Y+HD+A  +A++ L +NP+  L AA G                 A 
Sbjct: 953  PDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGEVDLCISWPRSKQAQ 1012

Query: 441  AVGGDVSLDTSTKNFTKY 494
            A  G VS+ T+ +++  Y
Sbjct: 1013 AQEGSVSITTNYRDWGAY 1030

to top

>LEU2_MYCSM (Q938C9) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 422

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +3

Query: 279 APGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFGTSALAVG-GD 455
           APG++ I++ A        + L YL D A   A I  +        A FG     VG G+
Sbjct: 315 APGVRLIVTPASQQVYRDAMRLGYLQDIADAGAVITNST-----CGACFGYHMGVVGPGE 369

Query: 456 VSLDTSTKNFT 488
           V L +ST+NFT
Sbjct: 370 VCLTSSTRNFT 380

to top

>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)|
           (Transcription factor GATA-B) (dGATA-B) (Protein
           serpent)
          Length = 1264

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 471 MYQATHHHQQLEH*FQTQQRG*L--QDWQSSQCLH*YQHNHVSTGA 340
           ++Q  HHHQQ  H  Q QQ+     Q  Q  Q  H + HN+ ++ A
Sbjct: 406 LHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSA 451

to top

>Y4SI_RHISN (P55652) Probable chemoreceptor y4sI (Methyl-accepting chemotaxis|
           protein)
          Length = 756

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
 Frame = +3

Query: 123 ANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPG----L 290
           A GA I +T T      +G + +   + N+ +   ANS   V+T  T   L+APG     
Sbjct: 158 AEGAIIYSTGTNP----VGPVDAN-GSINLAIASSANSQEAVMTDFTPPTLSAPGQALYA 212

Query: 291 KTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSAAFG--TSALAVGGDVSL 464
             I+   +PD+++G + +    +            N V+  +  FG  + AL  G D   
Sbjct: 213 VAIVHPFIPDKRNGTLLISMSTE----------MLNAVMGQAKGFGPHSEALIAGSD-GK 261

Query: 465 DTSTKNFTKYNAAFSYTNQDLIA 533
             S  + ++   A +  N DL++
Sbjct: 262 PRSLSSISRDEDAEAVVNSDLLS 284

to top

>FLID_BACHD (Q9K6W0) Flagellar hook-associated protein 2 (HAP2) (Filament cap|
           protein) (Flagellar cap protein)
          Length = 532

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
 Frame = +3

Query: 60  AKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSA 239
           A  L   DY     FT+TTY ++GAA+  + T      L  +   I +  + V +  NS 
Sbjct: 131 ADGLNIEDYH-GQTFTITTYNSSGAAVEKSFTIDTSKSLDSLFKDINSAGLGVRMSYNST 189

Query: 240 SNVI---TTITADDLAAPGLK--TILSFAVPDQKSGKVELQYLHDYAGINASIG-----L 389
            + +    T T    AA G     I+        +  ++L   ++ +G NA +      +
Sbjct: 190 YDKVIIERTETGAFNAADGSNDYQIVFGGDTGFLNDVLKLNQANEVSGTNAEVEFIDPIM 249

Query: 390 TANPVVNLSAAFGTSALAVGG-DVSLDTSTKNFTKYNAA 503
           ++ P+V   +   T+ + VGG   SL  +T+ F   N +
Sbjct: 250 SSEPIVVSDSR--TNRVTVGGITFSLTGTTEGFETLNVS 286

to top

>LEU2_CAMJR (Q5HS78) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 468

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = +3

Query: 51  GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 230
           GK    +LY D    H+ T +    +G  +      +ADL L  I   +  K++ ++  +
Sbjct: 18  GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSVDLNACS 76

Query: 231 NSASNVITTI 260
           + A   ITT+
Sbjct: 77  DMAKEQITTL 86

to top

>RBF1_CANAL (Q00312) Transcription factor RBF1 (RPG-box-binding factor)|
           (Repressor-activator protein 1)
          Length = 527

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -2

Query: 465 QATHHHQQLEH*FQTQQRG*LQDWQSSQCL---H*YQHNHVSTGAPPFQISDQEQQSSRW 295
           QA   HQQL+H +Q QQ+   Q  Q SQ L   H  QH HV       +    E   SR+
Sbjct: 122 QAQREHQQLQHAYQQQQQ-LHQLGQLSQQLAQPHLSQHEHVRDALTTDEFDTNEDLRSRY 180

to top

>METK_HELPJ (Q9ZMN5) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 385

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
 Frame = +3

Query: 360 YAGINASIGLTANPVVNLSAAFGTSALAVGGDVSLDTSTKNFTKYNAA---------FSY 512
           YA    +  L A+ V + +      A+ V   VS+  +T N +K+++A         F  
Sbjct: 277 YAARYVAKNLVASGVCDKATVQLAYAIGVIEPVSIYVNTHNTSKHSSAELEKCVKSVFKL 336

Query: 513 TNQDLIASLNLNNKGDSLTASYYHF 587
           T + +I SL+L     SLT++Y HF
Sbjct: 337 TPKGIIESLDLLRPIYSLTSAYGHF 361

to top

>GTFB_STRMU (P08987) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)|
           (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1476

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +3

Query: 108 LTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKANSASNVITTITADDLAA 281
           +T  T +G  + A S         E +SQI N + T  V AN  SNV T +T+   AA
Sbjct: 26  MTLTTLSGGLVKADSN--------ESKSQISNDSNTSVVTANEESNVTTEVTSKQEAA 75

to top

>KCC2B_HUMAN (Q13554) Calcium/calmodulin-dependent protein kinase type II beta|
           chain (EC 2.7.11.17) (CaM-kinase II beta chain) (CaM
           kinase II beta subunit) (CaMK-II beta subunit)
          Length = 664

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
 Frame = +3

Query: 6   SSPAEMG--GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILG 179
           ++PA M     G   G+ ++AK LL +  + D     T  T N AA T+    K  L   
Sbjct: 321 TAPATMSTAASGTTMGLVEQAKSLLNK--KADGVKPQTNSTKNSAAATSP---KGTLPPA 375

Query: 180 EIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILS 305
            ++ Q    +  VD    S+ +  TTI  +D  AP +  ILS
Sbjct: 376 ALEPQTTVIHNPVDGIKESSDSANTTIEDEDAKAPRVPDILS 417

to top

>LEU2_CAMJE (Q9PLW1) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 470

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/70 (25%), Positives = 32/70 (45%)
 Frame = +3

Query: 51  GKKAKDLLYRDYQTDHKFTLTTYTANGAAITATSTKKADLILGEIQSQIKNKNITVDVKA 230
           GK    +LY D    H+ T +    +G  +      +ADL L  I   +  K++ ++  +
Sbjct: 20  GKNELPILYIDRHLIHEVT-SPQAFSGLKMAKRRMARADLTLATIDHDVSTKSMDLNACS 78

Query: 231 NSASNVITTI 260
           + A   ITT+
Sbjct: 79  DMAKEQITTL 88

to top

>TBP2_HAEIN (P44971) Probable transferrin-binding protein 2 precursor|
          Length = 625

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 54  KKAKDLLYRDYQTDHKFTLTTYTANGA-AITATSTKKADLILGEIQSQIKNKNITVDVKA 230
           K  K  L R    +  F++     NG  A T T+T K DL++    SQ KN  I +  K 
Sbjct: 510 KTLKGSLKRADSQNPVFSIEANFKNGGNAFTGTATAK-DLVIDGKNSQTKNTPINITTKV 568

Query: 231 NSA 239
           N A
Sbjct: 569 NGA 571


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,552,674
Number of Sequences: 219361
Number of extensions: 1549508
Number of successful extensions: 4972
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4960
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result