ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart32e01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 898 bits (453), Expect = 0.0 Identities = 555/589 (94%) Strand = Plus / Plus Query: 1 atcccagctcaccggcggaaatgggcgggccaggcctctactccgggatcggcaagaagg 60 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 32 atcccagctcaccggcggagatgggcggcccaggcctctactccgggatcggcaagaagg 91 Query: 61 ccaaggatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctaca 120 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92 ccaaggatctactgtacagggactaccagaccgaccacaagttcaccctcaccacctaca 151 Query: 121 ccgccaatggcgccgcaattactgctaccagtacaaagaaggctgatctgatactcggtg 180 |||||||||| ||||||||||||||||||||||||||||||||||||| | | |||||| Sbjct: 152 ccgccaatgggcccgcaattactgctaccagtacaaagaaggctgatcttacagtcggtg 211 Query: 181 agatccaatcacagatcaagaacaagaacatcaccgtagatgtgaaggcaaactcggcat 240 ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 212 agatccaatcacagatcaagaacaaaaacatcactgtagatgtgaaggccaactcagcat 271 Query: 241 caaatgtcattacaacaattaccgctgacgatcttgcagcgccagggctgaagaccatct 300 | ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct: 272 cgaatgtcattactacaattactgctgacgatcttgcagcaccaggcctgaagaccatct 331 Query: 301 tgagctttgctgttcctgatcagaaatctggaaaggtggagctccagtacttacatgatt 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 332 tgagctttgctgttcctgatcagaaatctggaaaggttgagctccagtacttgcatgatt 391 Query: 361 atgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctctgctg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 392 atgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctctccggcg 451 Query: 421 cgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatacatccaccaaga 480 |||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 452 cgttcggaactagtgctctagctgttggtgctgacgtgtcgcttgatacagccaccaaga 511 Query: 481 atttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatccctga 540 ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 512 atttcgccaaatacaatgctgcacttagctacactaaccaggatcttatcgcatccctga 571 Query: 541 acctgaacaacaagggagacagcctcaccgcatcctattaccactttgt 589 ||||||||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 572 acctgaacaacaagggagacagcctgactgcatcctattaccacattgt 620
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 454 bits (229), Expect = e-124 Identities = 466/545 (85%) Strand = Plus / Plus Query: 21 atgggcgggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagg 80 |||| |||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||| | Sbjct: 204 atggtcgggccaggcctctacaccgagatcggcaagaagaccagggatctgctgtacaag 263 Query: 81 gactaccagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaatt 140 ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| | Sbjct: 264 gactaccagactgaccacaagttcaccctcactacctacacctccaatggcgtcgctgta 323 Query: 141 actgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaag 200 |||||| | || |||||||| ||||| ||||| || || ||||||||||||||||| ||| Sbjct: 324 actgcttctagcacaaagaaagctgacctgatccttggcgagatccaatcacagataaag 383 Query: 201 aacaagaacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaatt 260 ||||||||||| ||| |||||||||| |||||||||| |||||| ||||||| |||||| Sbjct: 384 aacaagaacatgaccatagatgtgaaagcaaactcggagtcaaatatcattacgacaatt 443 Query: 261 accgctgacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgat 320 || | ||| || ||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 444 actgttgatgagattgcaacaccagggctgaagaccatcttaagctttgctgttcctgat 503 Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagc 380 |||| |||||||||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 504 cagagatctggaaaggttgagctccagtatttgcatgattatgctggagttaatgcaagc 563 Query: 381 attggcttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctcta 440 || || |||| ||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 564 atcggtctgacagccaatcctgtagtcaacctctctgctgcctttggtactaaggctgtt 623 Query: 441 gctgttggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgct 500 || ||||||| ||| | || |||||||| | || ||| || || |||||||||||| Sbjct: 624 gcagttggtgccgatatctcacttgatactgcaactgggaacttgactaaatacaatgct 683 Query: 501 gcgtttagctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagac 560 || | || | |||| | |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 684 gcactgaggttcactcatgaagaccttgtcgcatccctgaacctgaacaacaagggagac 743 Query: 561 agcct 565 ||||| Sbjct: 744 agcct 748
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 446 bits (225), Expect = e-122 Identities = 465/545 (85%) Strand = Plus / Minus Query: 21 atgggcgggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagg 80 |||| |||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||| | Sbjct: 1100 atggtcgggccaggcctctacaccgagatcggcaagaagaccagggatctgctgtacaag 1041 Query: 81 gactaccagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaatt 140 ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| | Sbjct: 1040 gactaccagactgaccacaagttcaccctcactacctacacctccaatggcgtcgctgta 981 Query: 141 actgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaag 200 |||||| | || |||||||| ||||| ||||| || || ||||||||||||||||| ||| Sbjct: 980 actgcttctagcacaaagaaagctgacctgatccttggcgagatccaatcacagataaag 921 Query: 201 aacaagaacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaatt 260 ||||||||||| ||| |||||||||| |||||||||| |||||| |||||||||||||| Sbjct: 920 aacaagaacatgaccatagatgtgaaagcaaactcggagtcaaatatcattacaacaatt 861 Query: 261 accgctgacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgat 320 || | ||| || ||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 860 actgttgatgagattgcaacaccagggctgaagaccatcttaagctttgctgttcctgat 801 Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagc 380 |||| |||||||||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 800 cagagatctggaaaggttgagctccagtatttgcatgattatgctggagttaatgcaagc 741 Query: 381 attggcttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctcta 440 || || |||| ||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 740 atcggtctgacagccaatcctgtagtcaacctctctgctgcctttggtactaaggctgtt 681 Query: 441 gctgttggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgct 500 || ||||||| ||| | || |||||||| | || ||| || || |||||||||||| Sbjct: 680 gcagttggtgccgatatctcacttgatactgcaactgggaacttgactaaatacaatgct 621 Query: 501 gcgtttagctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagac 560 || | || | |||| | |||| ||| |||||||||||||||||||||||||||| | | Sbjct: 620 gcactgaggttcactcatgaagaccttgtcgcatccctgaacctgaacaacaagggcgcc 561 Query: 561 agcct 565 ||||| Sbjct: 560 agcct 556
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 446 bits (225), Expect = e-122 Identities = 465/545 (85%) Strand = Plus / Plus Query: 21 atgggcgggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagg 80 |||| |||||||||||||||| ||| ||||||||||||| ||| ||||||||| |||| | Sbjct: 93 atggtcgggccaggcctctacaccgagatcggcaagaagaccagggatctgctgtacaag 152 Query: 81 gactaccagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaatt 140 ||||||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| | Sbjct: 153 gactaccagactgaccacaagttcaccctcactacctacacctccaatggcgtcgctgta 212 Query: 141 actgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaag 200 |||||| | || |||||||| ||||| ||||| || || ||||||||||||||||| ||| Sbjct: 213 actgcttctagcacaaagaaagctgacctgatccttggcgagatccaatcacagataaag 272 Query: 201 aacaagaacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaatt 260 ||||||||||| ||| |||||||||| |||||||||| |||||| ||||||| |||||| Sbjct: 273 aacaagaacatgaccatagatgtgaaagcaaactcggagtcaaatatcattacgacaatt 332 Query: 261 accgctgacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgat 320 || | ||| || ||||| | |||||||||||||||||||| |||||||||||||||||| Sbjct: 333 actgttgatgagattgcaacaccagggctgaagaccatcttaagctttgctgttcctgat 392 Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagc 380 |||| |||||||||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 393 cagagatctggaaaggttgagctccagtatttgcatgattatgctggagttaatgcaagc 452 Query: 381 attggcttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctcta 440 || || |||| ||||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct: 453 atcggtctgacagccaatcctgtagtcaacctctctgctgcctttggtactaaggctgtt 512 Query: 441 gctgttggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgct 500 || |||||| ||| | || |||||||| | || ||| || || |||||||||||| Sbjct: 513 gcacttggtgccgatatctcacttgatactgcaactgggaacttgactaaatacaatgct 572 Query: 501 gcgtttagctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagac 560 || | || | |||| | |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 573 gcactgaggttcactcatgaagaccttgtcgcatccctgaacctgaacaacaagggagac 632 Query: 561 agcct 565 ||||| Sbjct: 633 agcct 637
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 422 bits (213), Expect = e-115 Identities = 476/563 (84%), Gaps = 3/563 (0%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactac 86 ||||||||||| ||| | | ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 96 gggccaggcctgtacccggagatcggcaagaaggccagggatctgctgtacagggactac 155 Query: 87 cagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 146 |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| Sbjct: 156 cagaccgaccacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgct 215 Query: 147 accagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaag 206 |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| Sbjct: 216 accagtacaaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaag 275 Query: 207 aacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgct 266 |||||||| ||||||||||| |||||||| | |||||||| |||| || | |||| | Sbjct: 276 aacatcactgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgtt 335 Query: 267 gacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaa 326 || || || | | ||||| ||||| |||||||||||||||||||||| ||||| | | Sbjct: 336 gatgagct---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaaga 392 Query: 327 tctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagcattggc 386 ||||||||| | ||||| || |||| ||||||||||||||| ||| |||||| ||||| Sbjct: 393 tctggaaagtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggt 452 Query: 387 ttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgtt 446 |||||||||| |||||||||||| ||||| || |||||||| | ||||| |||||| Sbjct: 453 ttgactgccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgtt 512 Query: 447 ggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgttt 506 |||| |||||| || |||||||| |||| ||| || |||||||| ||||||| || Sbjct: 513 ggtgctgatgtctcacttgataccgccacggggaacttgaccaaatataatgctggattg 572 Query: 507 agctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctc 566 |||| || ||| | ||||||||||| || |||||||||||||||||||||| || ||| Sbjct: 573 agcttcagtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctc 632 Query: 567 accgcatcctattaccactttgt 589 || ||||| ||||||||| |||| Sbjct: 633 actgcatcttattaccacattgt 655
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 422 bits (213), Expect = e-115 Identities = 476/563 (84%), Gaps = 3/563 (0%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactac 86 ||||||||||| ||| | | ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 33 gggccaggcctgtacccggagatcggcaagaaggccagggatctgctgtacagggactac 92 Query: 87 cagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 146 |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| Sbjct: 93 cagaccgaccacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgct 152 Query: 147 accagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaag 206 |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| Sbjct: 153 accagtacaaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaag 212 Query: 207 aacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgct 266 |||||||| ||||||||||| |||||||| | |||||||| |||| || | |||| | Sbjct: 213 aacatcactgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgtt 272 Query: 267 gacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaa 326 || || || | | ||||| ||||| |||||||||||||||||||||| ||||| | | Sbjct: 273 gatgagct---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaaga 329 Query: 327 tctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagcattggc 386 ||||||||| | ||||| || |||| ||||||||||||||| ||| |||||| ||||| Sbjct: 330 tctggaaagtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggt 389 Query: 387 ttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgtt 446 |||||||||| |||||||||||| ||||| || |||||||| | ||||| |||||| Sbjct: 390 ttgactgccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgtt 449 Query: 447 ggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgttt 506 |||| |||||| || |||||||| |||| ||| || |||||||| ||||||| || Sbjct: 450 ggtgctgatgtctcacttgataccgccacggggaacttgaccaaatataatgctggattg 509 Query: 507 agctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctc 566 |||| || ||| | ||||||||||| || |||||||||||||||||||||| || ||| Sbjct: 510 agcttcagtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctc 569 Query: 567 accgcatcctattaccactttgt 589 || ||||| ||||||||| |||| Sbjct: 570 actgcatcttattaccacattgt 592
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 422 bits (213), Expect = e-115 Identities = 476/563 (84%), Gaps = 3/563 (0%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactac 86 ||||||||||| ||| | | ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 96 gggccaggcctgtacccggagatcggcaagaaggccagggatctgctgtacagggactac 155 Query: 87 cagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 146 |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| Sbjct: 156 cagaccgaccacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgct 215 Query: 147 accagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaag 206 |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| Sbjct: 216 accagtacaaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaag 275 Query: 207 aacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgct 266 |||||||| ||||||||||| |||||||| | |||||||| |||| || | |||| | Sbjct: 276 aacatcactgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgtt 335 Query: 267 gacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaa 326 || || || | | ||||| ||||| |||||||||||||||||||||| ||||| | | Sbjct: 336 gatgagct---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaaga 392 Query: 327 tctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagcattggc 386 ||||||||| | ||||| || |||| ||||||||||||||| ||| |||||| ||||| Sbjct: 393 tctggaaagtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggt 452 Query: 387 ttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgtt 446 |||||||||| |||||||||||| ||||| || |||||||| | ||||| |||||| Sbjct: 453 ttgactgccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgtt 512 Query: 447 ggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgttt 506 |||| |||||| || |||||||| |||| ||| || |||||||| ||||||| || Sbjct: 513 ggtgctgatgtctcacttgataccgccacggggaacttgaccaaatataatgctggattg 572 Query: 507 agctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctc 566 |||| || ||| | ||||||||||| || |||||||||||||||||||||| || ||| Sbjct: 573 agcttcagtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctc 632 Query: 567 accgcatcctattaccactttgt 589 || ||||| ||||||||| |||| Sbjct: 633 actgcatcttattaccacattgt 655
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 422 bits (213), Expect = e-115 Identities = 476/563 (84%), Gaps = 3/563 (0%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactac 86 ||||||||||| ||| | | ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 110 gggccaggcctgtacccggagatcggcaagaaggccagggatctgctgtacagggactac 169 Query: 87 cagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 146 |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| Sbjct: 170 cagaccgaccacaagttcaccctcaccacctacaccagcaatggcgtcgcaatcactgct 229 Query: 147 accagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaagaacaag 206 |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||| Sbjct: 230 accagtacaaagaaggctgatctgatttttggtgagatccaatcacagataaagaacaag 289 Query: 207 aacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaattaccgct 266 |||||||| ||||||||||| |||||||| | |||||||| |||| || | |||| | Sbjct: 290 aacatcactgtagatgtgaaagcaaactcagactcaaatgttgttactactgtaaccgtt 349 Query: 267 gacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaa 326 || || || | | ||||| ||||| |||||||||||||||||||||| ||||| | | Sbjct: 350 gatgagct---aacaccaggattgaagtccatcttgagctttgctgttccggatcaaaga 406 Query: 327 tctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagcattggc 386 ||||||||| | ||||| || |||| ||||||||||||||| ||| |||||| ||||| Sbjct: 407 tctggaaagtttgagcttcaatactcgcatgattatgctggtgttagtgcaagtattggt 466 Query: 387 ttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctctagctgtt 446 |||||||||| |||||||||||| ||||| || |||||||| | ||||| |||||| Sbjct: 467 ttgactgccagtcctgtagtcaatctctccagtgtttttggaaccaaggctcttgctgtt 526 Query: 447 ggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgctgcgttt 506 |||| |||||| || |||||||| |||| ||| || |||||||| ||||||| || Sbjct: 527 ggtgctgatgtctcacttgataccgccacggggaacttgaccaaatataatgctggattg 586 Query: 507 agctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagacagcctc 566 |||| || ||| | ||||||||||| || |||||||||||||||||||||| || ||| Sbjct: 587 agcttcagtaatgatgatcttatcgcgtcattgaacctgaacaacaagggagatagtctc 646 Query: 567 accgcatcctattaccactttgt 589 || ||||| ||||||||| |||| Sbjct: 647 actgcatcttattaccacattgt 669
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 351 bits (177), Expect = 2e-93 Identities = 450/541 (83%) Strand = Plus / Plus Query: 21 atgggcgggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagg 80 |||| ||| |||||||||||| ||| ||||||||||||| ||| ||||||||| |||| | Sbjct: 153 atggtcggaccaggcctctacaccgagatcggcaagaagaccagggatctgctgtacaag 212 Query: 81 gactaccagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaatt 140 ||||||||||| |||||||||||||||||||| ||||||| | ||||||||| ||| | Sbjct: 213 gactaccagacagaccacaagttcaccctcactacctacagctccaatggcgtcgctgtc 272 Query: 141 actgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaag 200 |||||||| || |||||||| ||||| ||||| || |||||||||| |||||||| ||| Sbjct: 273 actgctactagcacaaagaaagctgacctgatcttcagtgagatccattcacagataaag 332 Query: 201 aacaagaacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaatt 260 ||||||||||| |||||||||||||| |||||||| | |||||| ||||||| ||| || Sbjct: 333 aacaagaacatgaccgtagatgtgaaagcaaactcagagtcaaatatcattactacagtt 392 Query: 261 accgctgacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgat 320 || | | || ||||| | ||||| |||||||| ||||| |||||||||||||||||| Sbjct: 393 actgtcaatgagattgcaacaccaggactgaagactatcttaagctttgctgttcctgat 452 Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagc 380 |||| |||||||||||| ||||| ||||| || |||||||||||||| ||||||||||| Sbjct: 453 cagagatctggaaaggttgagcttcagtatttgcatgattatgctggagttaatgcaagc 512 Query: 381 attggcttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctcta 440 || | |||| ||||||||||||| ||||||||||||||| ||||| |||| ||||| Sbjct: 513 gttagtctgacagccaatcctgtagccaacctctctgctgcttttggcactaaggctctc 572 Query: 441 gctgttggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgct 500 || ||||||| || | || ||||| | |||| ||| |||||||||||||||||| Sbjct: 573 gcagttggtgcagagatctcatttgattctgccactgggaacttcaccaaatacaatgct 632 Query: 501 gcgtttagctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagac 560 | || | | |||| | |||| |||||||||||||| || ||||||||||||||||| Sbjct: 633 ggattgatgttcactcatgaagaccttatcgcatcccttaatatgaacaacaagggagac 692 Query: 561 a 561 | Sbjct: 693 a 693
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 335 bits (169), Expect = 1e-88 Identities = 448/541 (82%) Strand = Plus / Plus Query: 21 atgggcgggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagg 80 |||| ||| |||||||||||| ||| ||||||||||||| ||| ||||||||| |||| | Sbjct: 148 atggtcggaccaggcctctacaccgagatcggcaagaagaccagggatctgctgtacaag 207 Query: 81 gactaccagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaatt 140 ||||||||||| |||||||||||||||||||| ||||||| | ||||||||| || | Sbjct: 208 gactaccagacagaccacaagttcaccctcactacctacagctccaatggcgttgctgtc 267 Query: 141 actgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaag 200 |||||||| || |||||||| ||||| ||||| || |||||||||| |||||||| ||| Sbjct: 268 actgctactagcacaaagaaagctgacctgatcttcagtgagatccattcacagataaag 327 Query: 201 aacaagaacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaatt 260 ||||||||||| |||||||||||||| |||||||| | |||||| ||||||| ||| || Sbjct: 328 aacaagaacatgaccgtagatgtgaaagcaaactcagagtcaaatatcattactacagtt 387 Query: 261 accgctgacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgat 320 || | | || ||||| | ||||| |||||||| ||||| |||||||||||||||||| Sbjct: 388 actgtcaatgagattgcaacaccaggactgaagactatcttaagctttgctgttcctgat 447 Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctggtattaatgcaagc 380 |||| |||||||||||| ||||| ||||| || |||||||||||||| ||||||||||| Sbjct: 448 cagagatctggaaaggttgagcttcagtatttgcatgattatgctggagttaatgcaagc 507 Query: 381 attggcttgactgccaatcctgtagtcaacctctctgctgcgtttggaactagtgctcta 440 || | |||| ||||||||||||| |||||||||||||| ||||| |||| ||||| Sbjct: 508 gttagtctgacagccaatcctgtagccaacctctctgctggctttggcactaaggctctc 567 Query: 441 gctgttggtggtgatgtgtcgcttgatacatccaccaagaatttcaccaaatacaatgct 500 || ||||||| || | || ||||| | |||| ||| |||||||||||||||||| Sbjct: 568 gcagttggtgcagaaatctcatttgattctgccactgggaacttcaccaaatacaatgct 627 Query: 501 gcgtttagctacactaaccaagatcttatcgcatccctgaacctgaacaacaagggagac 560 | || | | |||| | |||| |||||||||||||| || ||||||||||||||||| Sbjct: 628 ggattgatgttcactcatgaagaccttatcgcatcccttaatatgaacaacaagggagac 687 Query: 561 a 561 | Sbjct: 688 a 688
>gb|AF093538.1|AF093538 Zea mays voltage-dependent anion-selective channel protein mRNA, partial cds Length = 321 Score = 264 bits (133), Expect = 3e-67 Identities = 271/317 (85%) Strand = Plus / Plus Query: 21 atgggcgggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagg 80 |||| ||| |||||||||||| ||| ||||||||||||| ||| ||||||||| |||| | Sbjct: 1 atggtcggaccaggcctctacaccgagatcggcaagaagaccagggatctgctgtacaag 60 Query: 81 gactaccagaccgaccacaagttcaccctcaccacctacaccgccaatggcgccgcaatt 140 ||||||||||| |||||||||||||||||||| ||||||| | ||||||||| ||| | Sbjct: 61 gactaccagacagaccacaagttcaccctcactacctacagctccaatggcgtcgctgtc 120 Query: 141 actgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacagatcaag 200 |||||||| || |||||||| ||||| ||||| || |||||||||| |||||||| ||| Sbjct: 121 actgctactagcacaaagaaagctgacctgatcttcagtgagatccattcacagattaag 180 Query: 201 aacaagaacatcaccgtagatgtgaaggcaaactcggcatcaaatgtcattacaacaatt 260 |||| |||||| |||||||||||||| |||||||| | |||||| ||||||| ||| || Sbjct: 181 aacacgaacatgaccgtagatgtgaaagcaaactcagagtcaaatatcattactacagtt 240 Query: 261 accgctgacgatcttgcagcgccagggctgaagaccatcttgagctttgctgttcctgat 320 || || | || ||||| | ||||| |||||||| ||||| |||||||||||||||||| Sbjct: 241 actgcacatgagattgcaacaccaggactgaagactatcttaagctttgctgttcctgat 300 Query: 321 cagaaatctggaaaggt 337 |||| |||||||||||| Sbjct: 301 cagagatctggaaaggt 317
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 147 bits (74), Expect = 5e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactac 86 ||||||||||| ||| | | ||||||||||||||||| ||||||||| |||||||||||| Sbjct: 90 gggccaggcctgtacccggagatcggcaagaaggccagggatctgctgtacagggactac 149 Query: 87 cagaccgaccacaagttcaccctcaccacctacaccgccaatggcg 132 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150 cagaccgaccacaagttcaccctcaccacctacaccagcaatggcg 195 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 135 gcaattactgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacag 194 ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1134 gcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacag 1193 Query: 195 atcaagaacaagaacatcaccgtagatgtgaaggcaaactc 235 || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 1194 ataaagaacaagaacatcactgtagatgtgaaagcaaactc 1234 Score = 137 bits (69), Expect = 5e-29 Identities = 153/181 (84%) Strand = Plus / Plus Query: 289 tgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtggagctccagt 348 ||||| |||||||||||||||||||||| ||||| | |||||||||| | ||||| || | Sbjct: 1658 tgaagtccatcttgagctttgctgttccggatcaaagatctggaaagtttgagcttcaat 1717 Query: 349 acttacatgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtca 408 ||| ||||||||||||||| ||| |||||| ||||| |||||||||| ||||||||||| Sbjct: 1718 actcgcatgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtca 1777 Query: 409 acctctctgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgata 468 | ||||| || |||||||| | ||||| |||||||||| |||||| || ||||||| Sbjct: 1778 atctctccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgata 1837 Query: 469 c 469 | Sbjct: 1838 c 1838 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcctcaccgcatcctattaccactttgt 589 ||||||||||||||| || ||||| ||||| ||||||||| |||| Sbjct: 2558 gaacaacaagggagatagtctcactgcatcttattaccacattgt 2602
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 135 gcaattactgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacag 194 ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 11753142 gcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacag 11753201 Query: 195 atcaagaacaagaacatcaccgtagatgtgaaggcaaactc 235 || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 11753202 ataaagaacaagaacatcactgtagatgtgaaagcaaactc 11753242 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacaccgcc 125 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 11752137 gatctgctgtacagggactaccagaccgaccacaagttcaccctcaccacctacaccagc 11752196 Query: 126 aatggcg 132 ||||||| Sbjct: 11752197 aatggcg 11752203 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 354 catgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctc 413 ||||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||| Sbjct: 11753818 catgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctc 11753877 Query: 414 tctgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 469 || || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 11753878 tccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 11753933 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 289 tgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggt 337 ||||| |||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 11753666 tgaagtccatcttgagctttgctgttccggatcaaagatctggaaaggt 11753714 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcctcaccgcatcctattaccactttgt 589 ||||||||||||||| || ||||| ||||| ||||||||| |||| Sbjct: 11754653 gaacaacaagggagatagtctcactgcatcttattaccacattgt 11754697 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggcca 63 ||||||||||| ||| | | ||||||||||||||||| Sbjct: 11751971 gggccaggcctgtacccggagatcggcaagaaggcca 11752007
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 135 gcaattactgctaccagtacaaagaaggctgatctgatactcggtgagatccaatcacag 194 ||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 187776 gcaatcactgctaccagtacaaagaaggctgatctgatttttggtgagatccaatcacag 187835 Query: 195 atcaagaacaagaacatcaccgtagatgtgaaggcaaactc 235 || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 187836 ataaagaacaagaacatcactgtagatgtgaaagcaaactc 187876 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacaccgcc 125 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 186771 gatctgctgtacagggactaccagaccgaccacaagttcaccctcaccacctacaccagc 186830 Query: 126 aatggcg 132 ||||||| Sbjct: 186831 aatggcg 186837 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Plus Query: 354 catgattatgctggtattaatgcaagcattggcttgactgccaatcctgtagtcaacctc 413 ||||||||||||||| ||| |||||| ||||| |||||||||| |||||||||||| ||| Sbjct: 188452 catgattatgctggtgttagtgcaagtattggtttgactgccagtcctgtagtcaatctc 188511 Query: 414 tctgctgcgtttggaactagtgctctagctgttggtggtgatgtgtcgcttgatac 469 || || |||||||| | ||||| |||||||||| |||||| || |||||||| Sbjct: 188512 tccagtgtttttggaaccaaggctcttgctgttggtgctgatgtctcacttgatac 188567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 289 tgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggt 337 ||||| |||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 188300 tgaagtccatcttgagctttgctgttccggatcaaagatctggaaaggt 188348 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcctcaccgcatcctattaccactttgt 589 ||||||||||||||| || ||||| ||||| ||||||||| |||| Sbjct: 189287 gaacaacaagggagatagtctcactgcatcttattaccacattgt 189331 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 27 gggccaggcctctactccgggatcggcaagaaggcca 63 ||||||||||| ||| | | ||||||||||||||||| Sbjct: 186605 gggccaggcctgtacccggagatcggcaagaaggcca 186641
>gb|AY023713.1| Oryza sativa microsatellite MRG6038 containing (AACA)X7, closest to marker S13922, genomic sequence Length = 228 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacaccgcc 125 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 70 gatctgctgtacagggactaccagaccgaccacaagttcaccctcaccacctacaccagc 11 Query: 126 aatggcg 132 ||||||| Sbjct: 10 aatggcg 4
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 85.7 bits (43), Expect = 2e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 36 ctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagaccgac 95 |||||||||| |||||| |||||||||| ||||| || || | ||||||||| || ||| Sbjct: 108 ctctactccgagatcgggaagaaggccagagatctcctatataaggactaccacacggac 167 Query: 96 cacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 146 || |||||||| |||||||||||| ||||||| || || || ||||||||| Sbjct: 168 cagaagttcacgctcaccacctacgccgccaacggagctgccattactgct 218
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 85.7 bits (43), Expect = 2e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 36 ctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagaccgac 95 |||||||||| |||||| |||||||||| ||||| || || | ||||||||| || ||| Sbjct: 142 ctctactccgagatcgggaagaaggccagagatctcctatataaggactaccacacggac 201 Query: 96 cacaagttcaccctcaccacctacaccgccaatggcgccgcaattactgct 146 || |||||||| |||||||||||| ||||||| || || || ||||||||| Sbjct: 202 cagaagttcacgctcaccacctacgccgccaacggagctgccattactgct 252
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 29 gccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactacca 88 |||||| |||||| ||| |||||||||||| ||| |||||||| |||||||||||| Sbjct: 6 gccagggctctacaccgacatcggcaagaagaccagagatctgctttacagggactacgg 65 Query: 89 gaccgaccacaagttcaccctcaccacctacacc 122 ||| |||||||||||||||||||||||| |||| Sbjct: 66 gacgcaccacaagttcaccctcaccacctgcacc 99
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 29 gccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactacca 88 |||||| |||||| ||| |||||||||||| ||| |||||||| |||||||||||| Sbjct: 79 gccagggctctacaccgacatcggcaagaagaccagagatctgctttacagggactacgg 138 Query: 89 gaccgaccacaagttcaccctcaccacctacacc 122 ||| |||||||||||||||||||||||| |||| Sbjct: 139 gacgcaccacaagttcaccctcaccacctgcacc 172
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 29 gccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactacca 88 |||||| |||||| ||| |||||||||||| ||| |||||||| |||||||||||| Sbjct: 84 gccagggctctacaccgacatcggcaagaagaccagagatctgctttacagggactacgg 143 Query: 89 gaccgaccacaagttcaccctcaccacctacacc 122 ||| |||||||||||||||||||||||| |||| Sbjct: 144 gacgcaccacaagttcaccctcaccacctgcacc 177
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 29 gccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactacca 88 |||||| |||||| ||| |||||||||||| ||| |||||||| |||||||||||| Sbjct: 139 gccagggctctacaccgacatcggcaagaagaccagagatctgctttacagggactacgg 198 Query: 89 gaccgaccacaagttcaccctcaccacctacacc 122 ||| |||||||||||||||||||||||| |||| Sbjct: 199 gacgcaccacaagttcaccctcaccacctgcacc 232
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 29 gccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactacca 88 |||||| |||||| ||| |||||||||||| ||| |||||||| |||||||||||| Sbjct: 95 gccagggctctacaccgacatcggcaagaagaccagagatctgctttacagggactacgg 154 Query: 89 gaccgaccacaagttcaccctcaccac 115 ||| |||||||||||||||||||||| Sbjct: 155 gacgcaccacaagttcaccctcaccac 181
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagacc 92 |||||||||| || ||||||||||||||||| ||||| || |||| ||||| ||| || Sbjct: 136 ggcctctacttcgagatcggcaagaaggccagagatcttctgtacaaggacttccacacg 195 Query: 93 gaccacaagttcaccctcaccacctacacc 122 ||||| ||||| ||||| |||||||||||| Sbjct: 196 gaccagaagtttaccctgaccacctacacc 225 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 543 ctgaacaacaagggagacagcctcaccgcatcctattacca 583 ||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 646 ctgaacaacaaaggggacagcctcactgcgtcctactacca 686
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 279 gcgccagggctgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtg 338 |||||||| || ||||| || || ||||||| ||| || || ||||| ||||||||||| Sbjct: 335 gcgccaggactcaagacaattttcagctttgttgtaccagaccagaagtctggaaaggta 394 Query: 339 gagctccagtacttacatgattatgctgg 367 |||||||||||||| ||||| |||||||| Sbjct: 395 gagctccagtacttgcatgagtatgctgg 423
>emb|X82148.1|TAVDAC3 T.aestivum VDAC3 mRNA for voltage dependent anion channel Length = 1208 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagacc 92 ||||||||| ||| |||||||||||| ||| ||||||||||||||||||||| || Sbjct: 88 ggcctctacaccgacatcggcaagaagaccagagatctgctctacagggactactgcacg 147 Query: 93 gaccacaagttcaccctcaccac 115 |||| ||||||||||||||||| Sbjct: 148 caccagaagttcaccctcaccac 170
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence Length = 926 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagacc 92 ||||||||| ||| |||||||||||| ||| |||||||| |||| ||||||| | || Sbjct: 141 ggcctctacaccgacatcggcaagaagaccagagatctgctgtacaaggactacaacacg 200 Query: 93 gaccacaagttcaccctcaccacctacaccgccaatggcgccgcaat 139 |||| |||||| |||||||||||| | || ||||||||| |||||| Sbjct: 201 caccagaagttctccctcaccacctgctcccccaatggcgtcgcaat 247
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 36 ctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagaccgac 95 |||||||||| |||||||||||||| | ||||| || || ||||| ||||| || ||| Sbjct: 34 ctctactccgacatcggcaagaaggctagagatctcctgtatagggattaccacacggac 93 Query: 96 cacaagttcaccctcaccacctacaccgc 124 || |||||||| |||||||||||| |||| Sbjct: 94 cagaagttcacgctcaccacctacgccgc 122 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 543 ctgaacaacaagggagacagcct 565 ||||||||||||||||||||||| Sbjct: 541 ctgaacaacaagggagacagcct 563
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacacc 122 |||||||| |||||||||||| ||| |||||||||||||||||||||||| |||| Sbjct: 22906469 gatctgctttacagggactacgggacgcaccacaagttcaccctcaccacctgcacc 22906413 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 33 ggcctctactccgggatcggcaagaaggcca 63 |||||||||| || ||||||||||||||||| Sbjct: 29766367 ggcctctacttcgagatcggcaagaaggcca 29766337 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacacc 122 ||||| || |||| ||||| ||| || ||||| ||||| ||||| |||||||||||| Sbjct: 29766187 gatcttctgtacaaggacttccacacggaccagaagtttaccctgaccacctacacc 29766131
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacacc 122 |||||||| |||||||||||| ||| |||||||||||||||||||||||| |||| Sbjct: 110026 gatctgctttacagggactacgggacgcaccacaagttcaccctcaccacctgcacc 109970
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 36 ctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagaccgac 95 |||||||||| |||||||||||||| | ||||| || || ||||| ||||| || ||| Sbjct: 73 ctctactccgacatcggcaagaaggctagagatctcctgtatagggattaccacacggac 132 Query: 96 cacaagttcaccctcaccacctacaccgc 124 || |||||||| |||||||||||| |||| Sbjct: 133 cagaagttcacgctcaccacctacgccgc 161 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 543 ctgaacaacaagggagacagcct 565 ||||||||||||||||||||||| Sbjct: 580 ctgaacaacaagggagacagcct 602
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 36 ctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagaccgac 95 |||||||||| |||||||||||||| | ||||| || || ||||| ||||| || ||| Sbjct: 117 ctctactccgacatcggcaagaaggctagagatctcctgtatagggattaccacacggac 176 Query: 96 cacaagttcaccctcaccacctacaccgc 124 || |||||||| |||||||||||| |||| Sbjct: 177 cagaagttcacgctcaccacctacgccgc 205 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 543 ctgaacaacaagggagacagcct 565 ||||||||||||||||||||||| Sbjct: 624 ctgaacaacaagggagacagcct 646
>gb|U50900.1|SOU50900 Spinacia oleracea voltage-dependent anion channel protein (SVDAC1) mRNA, complete cds Length = 1180 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacaccgcc 125 ||||| || |||||||| || |||| ||||||||||||||||| ||||| ||||||||| Sbjct: 113 gatcttctgtacagggattatcagagtgaccacaagttcacccttaccacatacaccgcc 172 Query: 126 aatgg 130 ||||| Sbjct: 173 aatgg 177 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 311 tgttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctgg 367 |||||||||||||| |||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct: 355 tgttcctgatcagagatctggcaaggttgagcttcagtatttgcatgagtatgctgg 411
>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent anion-selective channel mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 48 atcggcaagaaggccaaggatctgctctacagggactaccagaccgaccacaagttcacc 107 ||||||||||| |||| ||||||||| | || ||||||||| | ||||| ||||||||| Sbjct: 31 atcggcaagaaagccagggatctgctgttcaaggactaccacagtgaccagaagttcacc 90 Query: 108 ctcaccacctac 119 ||||||||||| Sbjct: 91 gtcaccacctac 102 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 312 gttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctgg 367 |||||||| |||| |||||||||||||| || |||||||| ||||| |||||||| Sbjct: 292 gttcctgaccagaggtctggaaaggtggaacttcagtacttgcatgactatgctgg 347
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 48 atcggcaagaaggccaaggatctgctctacagggactaccagaccgaccacaagttcacc 107 |||||||||||||||| ||||| ||| ||||||||||| |||| ||| ||||||||| Sbjct: 19 atcggcaagaaggccagagatctcctcaacagggactacaccaccggccagaagttcacc 78 Query: 108 ctcaccacctacaccgccaatggcgccgcaattact 143 |||||||| | ||||||| || ||| |||||||| Sbjct: 79 ttcaccaccaccgccgccaacggagccacaattact 114 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 483 ttcaccaaatacaatgctgcgtttagctacactaaccaagatcttatcgcatccctgaac 542 |||||||| |||||||||| | ||| |||||||||||||||||| || || |||| Sbjct: 460 ttcaccaagtacaatgctggactgagccacactaaccaagatcttactgcttcgttgaat 519 Query: 543 ctgaacaacaagg 555 ||||||||||||| Sbjct: 520 ctgaacaacaagg 532
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 312 gttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||||||||| | ||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 371 gttcctgatcaaaggtctggaaaggtggagcttcaatacttgcatgactatgctggtat 429 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 48 atcggcaagaaggccaaggatctgctctacagggactaccagaccgaccacaagttcacc 107 ||||||||||| |||| ||||||||| | || ||| ||||| | ||||| ||||||||| Sbjct: 110 atcggcaagaaagccagggatctgctgttcaaggattaccacagtgaccagaagttcacc 169 Query: 108 ctcaccacct 117 ||||||||| Sbjct: 170 atcaccacct 179
>emb|X73429.1|ZMPOR1 Z.mays mRNA for porin Length = 1810 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagacc 92 ||||||||| ||| |||||||||||| ||| |||||||| |||| ||||||| | || Sbjct: 21 ggcctctacaccgacatcggcaagaagaccagagatctgctgtacaaggactacaacacg 80 Query: 93 gaccacaagttcaccctcaccacctacaccgccaatggcgccgcaat 139 |||| |||||| ||||||||||| | || ||||||||| |||||| Sbjct: 81 caccagaagttctgcctcaccacctcctcccccaatggcgtcgcaat 127
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctgg 367 ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 304 cagaagtctggaaaggtagagctccagtacttgcatgagtatgctgg 350
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 321 cagaaatctggaaaggtggagctccagtacttacatgattatgctgg 367 ||||| ||||||||||| |||||||||||||| ||||| |||||||| Sbjct: 344 cagaagtctggaaaggtagagctccagtacttgcatgagtatgctgg 390
>gb|AY823551.1| Pennisetum glaucum voltage dependent anion channel protein mRNA, complete cds Length = 1025 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctc 74 ||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 19 ggcctcttctccgacatcggcaagaaggccaaggatctgctc 60
>gb|AF513381.1| Pennisetum glaucum PgPOR29 (PORIN) mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctc 74 ||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 19 ggcctcttctccgacatcggcaagaaggccaaggatctgctc 60
>gb|AF139498.1|AF139498 Prunus armeniaca porin (mPOR) mRNA, nuclear gene encoding mitochondrial product, complete cds Length = 1119 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 288 ctgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtggagctccag 347 |||||| | ||||| |||||| ||| ||||| |||| |||||| |||||||||||||| Sbjct: 332 ctgaaggcaatctttagctttattgtacctgaccagagatctggcaaggtggagctccaa 391 Query: 348 tacttacatgattatgctggtattaatgcaagcattggcttgactgccaatcc 400 || ||||| |||||||| || | | | |||||||| |||||||||||||| Sbjct: 392 tatcagcatgagtatgctggaataagtactagcattgggttgactgccaatcc 444 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 48 atcggcaagaaggccaaggatctgctctacagggactaccagaccgaccacaagttcac 106 ||||||||||| |||| ||||| || |||| ||| ||||| | ||||||||||||||| Sbjct: 95 atcggcaagaaagccagagatcttctttacaaggattaccaaagcgaccacaagttcac 153
>gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, complete cds Length = 1069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 288 ctgaagaccatcttgagctttgctgttcctgatcagaaatctggaaaggtggagctccag 347 |||||||| || || |||||| | |||| |||||||||||||| |||||||| ||||| Sbjct: 296 ctgaagacaatttttagctttatttttccagatcagaaatctggcaaggtggaactccaa 355 Query: 348 tacttacatgattatgctgg 367 ||| |||||| |||||||| Sbjct: 356 taccaacatgaatatgctgg 375 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 93 gaccacaagttcaccctcaccacctacac 121 ||||||||||||||| ||||||| ||||| Sbjct: 104 gaccacaagttcaccatcaccacttacac 132
>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds Length = 1103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 312 gttcctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctgg 367 ||||||||||| | |||||||||||||| || |||||||| ||||| |||||||| Sbjct: 319 gttcctgatcaaaggtctggaaaggtggaacttcagtacttgcatgactatgctgg 374
>gb|DQ296180.1| Brassica rapa clone 219 unknown mRNA Length = 1117 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 315 cctgatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||||||||||||||| ||||| ||||||||||| | || || ||||||||||| Sbjct: 355 cctgatcagaaatctggcaaggttgagctccagtatctgcacgactatgctggtat 410
>gb|DQ294272.1| Solanum tuberosum clone 154C04 34 kDa outer mitochondrial membrane protein porin-like protein mRNA, complete cds; nuclear gene for mitochondrial product Length = 1167 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 36 ctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccagaccgac 95 |||||||||| |||||||||||| || ||||| || |||||||| |||||||| ||| Sbjct: 64 ctctactccgatatcggcaagaagacccgagatcttctgtacagggattaccagactgac 123 Query: 96 cacaagttcac 106 ||||| ||||| Sbjct: 124 cacaaattcac 134
>gb|AY105200.1| Zea mays PCO141157 mRNA sequence Length = 1411 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatct 70 ||||||| ||||| ||||||||||||||||||||||| Sbjct: 260 ggcctcttctccgacatcggcaagaaggccaaggatct 297
>emb|X80386.1|STPORIN1 S.tuberosum pPOM34 mRNA for mitochondrial 34kDa porin Length = 1210 Score = 48.1 bits (24), Expect = 0.033 Identities = 60/72 (83%) Strand = Plus / Plus Query: 48 atcggcaagaaggccaaggatctgctctacagggactaccagaccgaccacaagttcacc 107 ||||| |||||||| | |||||| | |||| ||||||||||| |||||||||||| | Sbjct: 81 atcggaaagaaggctagagatctgttgtacaaggactaccagagtgaccacaagttctct 140 Query: 108 ctcaccacctac 119 ||||||||||| Sbjct: 141 atcaccacctac 152
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 78 agggactaccagaccgaccacaagttcaccctcaccacctacaccgc 124 ||||| ||||| || ||||| |||||||| |||||||||||| |||| Sbjct: 66382 agggattaccacacggaccagaagttcacgctcaccacctacgccgc 66428 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcct 565 ||||||||||||||||||||| Sbjct: 68774 gaacaacaagggagacagcct 68794
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 78 agggactaccagaccgaccacaagttcaccctcaccacctacaccgc 124 ||||| ||||| || ||||| |||||||| |||||||||||| |||| Sbjct: 26421691 agggattaccacacggaccagaagttcacgctcaccacctacgccgc 26421737 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcct 565 ||||||||||||||||||||| Sbjct: 26424083 gaacaacaagggagacagcct 26424103 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcct 565 ||||||||||||||||||||| Sbjct: 25619625 gaacaacaagggagacagcct 25619645
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 33 ggcctctactccgggatcggcaagaaggcca 63 |||||||||| || ||||||||||||||||| Sbjct: 10462 ggcctctacttcgagatcggcaagaaggcca 10432 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacacc 122 ||||| || |||| ||||| ||| || ||||| ||||| ||||| |||||||||||| Sbjct: 10282 gatcttctgtacaaggacttccacacggaccagaagtttaccctgaccacctacacc 10226
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 33 ggcctctactccgggatcggcaagaaggcca 63 |||||||||| || ||||||||||||||||| Sbjct: 96098 ggcctctacttcgagatcggcaagaaggcca 96068 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 66 gatctgctctacagggactaccagaccgaccacaagttcaccctcaccacctacacc 122 ||||| || |||| ||||| ||| || ||||| ||||| ||||| |||||||||||| Sbjct: 95918 gatcttctgtacaaggacttccacacggaccagaagtttaccctgaccacctacacc 95862
>gb|AY823552.1| Pennisetum glaucum voltage dependent anion channel protein gene, complete cds Length = 2967 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaagg 66 ||||||| ||||| ||||||||||||||||||| Sbjct: 19 ggcctcttctccgacatcggcaagaaggccaagg 52
>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a component of oligomeric golgi complex 1 (Cog5) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 198523 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 339 gagctccagtacttacatgatt 360 |||||||||||||||||||||| Sbjct: 18195 gagctccagtacttacatgatt 18216
>gb|AY224468.1| Oryza sativa (japonica cultivar-group) isolate 24162 porin-like protein mRNA, complete cds Length = 834 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctc 74 ||||||| ||||| || ||||||| |||||||||||||||| Sbjct: 19 ggcctcttctccgacattggcaagagggccaaggatctgctc 60
>gb|AY819040.1| Symphonia globulifera clone Sg10 microsatellite sequence Length = 167 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 accacaagttcaccctcaccac 115 |||||||||||||||||||||| Sbjct: 1 accacaagttcaccctcaccac 22
>dbj|AK121020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E21, full insert sequence Length = 1265 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctc 74 ||||||| ||||| || ||||||| |||||||||||||||| Sbjct: 147 ggcctcttctccgacattggcaagagggccaaggatctgctc 188
>gb|AY109870.1| Zea mays CL2099_1 mRNA sequence Length = 1799 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 33 ggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactac 86 ||||||||| ||| |||||||||||| ||| |||||||| |||| ||||||| Sbjct: 21 ggcctctacaccgacatcggcaagaagaccagagatctgctgtacaaggactac 74
>ref|NM_121513.3| Arabidopsis thaliana voltage-gated ion-selective channel AT5G15090 mRNA, complete cds Length = 1254 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 381 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 433
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcct 565 ||||||||||||||||||||| Sbjct: 136032 gaacaacaagggagacagcct 136052
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 gaacaacaagggagacagcct 565 ||||||||||||||||||||| Sbjct: 31994 gaacaacaagggagacagcct 32014
>gb|DQ160023.1| Taraxacum officinale TO25b-23rc (To25b-23rc) mRNA, partial cds Length = 199 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 30 ccaggcctctactccgggatcggcaagaaggccaaggatctgctctacagggactaccag 89 ||||||||||| ||| |||||||| || |||| ||||| || |||||||| ||||| Sbjct: 28 ccaggcctctatcccgatatcggcaaaaaagccagagatcttctatacagggattaccaa 87 Query: 90 accgaccacaagttcaccctcaccaccta 118 | |||||| |||||| | ||||| ||||| Sbjct: 88 agcgaccataagttctctctcactaccta 116
>emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on chromosome 10 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 103011 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 tacttacatgattatgctggtattaatgc 376 ||||||||| |||||| |||||||||||| Sbjct: 47336 tacttacatcattatgatggtattaatgc 47308
>gb|AY122918.1| Arabidopsis thaliana putative voltage-dependent anion-selective channel protein hsr2 (At5g15090) mRNA, complete cds Length = 856 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 298 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 350
>gb|AY063891.1| Arabidopsis thaliana putative voltage-dependent anion-selective channel protein hsr2 (At5g15090) mRNA, complete cds Length = 1250 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 369 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 421
>gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164012 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 tacttacatgattatgctggtattaatgc 376 ||||||||| |||||| |||||||||||| Sbjct: 83913 tacttacatcattatgatggtattaatgc 83885
>emb|BX829828.1|CNS0A1JA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1028 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 345 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 397
>emb|BX829727.1|CNS0A1A1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB31ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1029 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 342 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 394
>emb|BX829477.1|CNS0A1F7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1503 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 840 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 892
>gb|AY085248.1| Arabidopsis thaliana clone 1417 mRNA, complete sequence Length = 1111 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 370 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 422
>emb|AJ131391.1|ATH131391 Arabidopsis thaliana mRNA for voltage-dependent anion-selective channel protein Length = 1107 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 318 gatcagaaatctggaaaggtggagctccagtacttacatgattatgctggtat 370 ||||| ||||||||||||| ||| | ||||| || ||||| ||||||||||| Sbjct: 352 gatcacaaatctggaaaggctgaggttcagtatttccatgactatgctggtat 404
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 atccctgaacctgaacaacaa 553 ||||||||||||||||||||| Sbjct: 3828902 atccctgaacctgaacaacaa 3828882
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 334 aggtggagctccagtacttacatgattatgctggtat 370 |||||||||| || ||||| ||||| ||||||||||| Sbjct: 120305 aggtggagcttcaatacttgcatgactatgctggtat 120269
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b, complete sequence Length = 54022 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 aggtggagctccagtacttacatgattatgctggtat 370 |||||||||| || ||||| ||||| ||||||||||| Sbjct: 7913 aggtggagcttcaatacttgcatgactatgctggtat 7949
>gb|AC004763.1| Homo sapiens chromosome 5, P1 clone 854b11 (LBNL H44), complete sequence Length = 87050 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagatcaagaacaagaacatcacc 215 ||||||||||| |||||||||||| Sbjct: 9281 cagatcaagaaaaagaacatcacc 9304
>gb|AY426768.1| Streptomyces clavuligerus ornithine acetyltransferase (oat1), proclavaminate amidinohydrolase (pah1), beta-lactam synthetase (bls1), and carboxyethyl arginine synthase (ceaS1) genes, complete cds Length = 5945 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tcaccacctacaccgccaatggcg 132 ||||||||||||||||||| |||| Sbjct: 5239 tcaccacctacaccgccaagggcg 5216
>emb|CR405683.10| Zebrafish DNA sequence from clone CH211-157B13 in linkage group 2, complete sequence Length = 166899 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 gctacactaaccaagatctt 527 |||||||||||||||||||| Sbjct: 7438 gctacactaaccaagatctt 7419
>emb|AL353707.14| Human DNA sequence from clone RP11-553J6 on chromosome 9 Contains a ribosomal protein S19 (RPS19) pseudogene, complete sequence Length = 125373 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 accaagaatttcaccaaata 493 |||||||||||||||||||| Sbjct: 37039 accaagaatttcaccaaata 37058
>emb|AL136231.12| Human DNA sequence from clone RP11-6J24 on chromosome 9p24.1-24.3 Contains the 3' end of the SLC1A1 gene for solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), the 5' end of a novel gene (FLJ10058), the gene for Hsp90-associating relative of Cdc37 (HARC) (FLJ20639), the 3' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S6 (RPS6) pseudogene and 3 CpG islands, complete sequence Length = 160012 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 tttagctacactaaccaaga 523 |||||||||||||||||||| Sbjct: 89494 tttagctacactaaccaaga 89513
>emb|BX663493.8| Zebrafish DNA sequence from clone DKEY-183G16 in linkage group 2, complete sequence Length = 34449 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 gaaggcaaactcggcatcaa 243 |||||||||||||||||||| Sbjct: 13500 gaaggcaaactcggcatcaa 13481
>gb|AF295653.1| Beta vulgaris voltage-dependent anion channel (por) gene, partial cds Length = 770 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 tgttcctgatcagaaatctggaaaggtg 338 |||||||||||||| |||||| |||||| Sbjct: 573 tgttcctgatcagagatctggcaaggtg 600
>gb|AC122129.9| Homo sapiens chromosome 17, clone RP1-253P7, complete sequence Length = 159868 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagatcaagaacaagaacatcacc 215 ||||||||||| |||||||||||| Sbjct: 22075 cagatcaagaaaaagaacatcacc 22098
>gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence Length = 177993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cagatcaagaacaagaacat 211 |||||||||||||||||||| Sbjct: 161181 cagatcaagaacaagaacat 161200
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tttagctacactaaccaaga 523 |||||||||||||||||||| Sbjct: 61868 tttagctacactaaccaaga 61849
>emb|AL954379.17| Mouse DNA sequence from clone RP24-162K15 on chromosome 4, complete sequence Length = 72483 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tgaagaccatcttgagcttt 308 |||||||||||||||||||| Sbjct: 53286 tgaagaccatcttgagcttt 53305
>dbj|AP000484.5| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14B22, complete sequences Length = 105149 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tttagctacactaaccaaga 523 |||||||||||||||||||| Sbjct: 89307 tttagctacactaaccaaga 89288
>gb|BC082227.1| Xenopus laevis hypothetical LOC494637, mRNA (cDNA clone MGC:99384 IMAGE:7205622), complete cds Length = 772 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ttgagctttgctgttcctga 319 |||||||||||||||||||| Sbjct: 582 ttgagctttgctgttcctga 563
>dbj|AB007546.1| Homo sapiens gene for LECT2, complete cds Length = 11134 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 cagatcaagaacaagaacatcacc 215 ||||||||||| |||||||||||| Sbjct: 6683 cagatcaagaaaaagaacatcacc 6706
>emb|AL354000.7|HS253P07 Homo from PAC RP1-253P07 and PAC RP1-281I13 (complete covert by PAC RP1-253P07), complete sequence Length = 159876 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 cagatcaagaacaagaacatcacc 215 ||||||||||| |||||||||||| Sbjct: 137801 cagatcaagaaaaagaacatcacc 137778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,583,248 Number of Sequences: 3902068 Number of extensions: 4583248 Number of successful extensions: 120973 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120606 Number of HSP's gapped (non-prelim): 359 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
