Clone Information

BLAST Search Result

Clone Name	bart32d10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXP...	74	2e-13
2	EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXP...	71	2e-12
3	EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXP...	71	2e-12
4	EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXP...	40	0.003
5	PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23....	39	0.007
6	EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2...	38	0.022
7	EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXP...	37	0.037
8	EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX...	37	0.048
9	EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXP...	36	0.082
10	EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX...	35	0.14
11	EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-...	35	0.14
12	EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-...	34	0.24
13	EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX...	34	0.31
14	EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP...	34	0.31
15	H11_GLYBA (P40263) Histone H1-I	33	0.41
16	EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen...	33	0.41
17	EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) ...	33	0.41
18	EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-...	33	0.41
19	H11_GLYSA (P40266) Histone H1-I	33	0.53
20	EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-...	33	0.53
21	EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-...	33	0.53
22	ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4....	33	0.53
23	EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX...	33	0.69
24	SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysi...	33	0.69
25	ZN341_HUMAN (Q9BYN7) Zinc finger protein 341	32	0.90
26	POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)	32	0.90
27	EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX...	32	0.90
28	EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5...	32	1.2
29	EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-...	32	1.5
30	RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (E...	32	1.5
31	EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX...	31	2.0
32	SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Tra...	31	2.0
33	EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX...	31	2.6
34	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	31	2.6
35	EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4...	31	2.6
36	SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)	30	3.4
37	ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: ...	30	3.4
38	FAS2_YEAST (P19097) Fatty acid synthase alpha subunit (EC 2.3.1....	30	3.4
39	Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410	30	3.4
40	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	30	3.4
41	CEBPE_SHEEP (O77728) CCAAT/enhancer-binding protein epsilon (C/E...	30	3.4
42	CEBPE_RAT (P56261) CCAAT/enhancer-binding protein epsilon (C/EBP...	30	3.4
43	CEBPE_MOUSE (Q6PZD9) CCAAT/enhancer-binding protein epsilon (C/E...	30	3.4
44	Y2232_MYCBO (P64954) Hypothetical protein Mb2232	30	4.5
45	Y2209_MYCTU (P64953) Hypothetical protein Rv2209/MT2265	30	4.5
46	TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Ant...	30	4.5
47	EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EX...	30	4.5
48	EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX...	30	4.5
49	CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)	30	4.5
50	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	30	5.9
51	FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related p...	30	5.9
52	VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Pro...	30	5.9
53	FBLI1_PONPY (Q5REN1) Filamin-binding LIM protein 1	30	5.9
54	MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1	30	5.9
55	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	30	5.9
56	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	29	7.7
57	IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2	29	7.7
58	MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Or...	29	7.7
59	MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I)...	29	7.7
60	CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)	29	7.7
61	IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)	29	7.7
62	GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and bra...	29	7.7
63	TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-...	29	7.7
64	NAGS_HUMAN (Q8N159) N-acetylglutamate synthase, mitochondrial pr...	29	10.0
65	DPO3X_ECOLI (P06710) DNA polymerase III tau subunit (EC 2.7.7.7)...	29	10.0
66	MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)	29	10.0
67	ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ...	29	10.0
68	Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)	29	10.0
69	SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot...	29	10.0

>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)|
           (Ath-ExpBeta-2.1)
          Length = 265

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 32/69 (46%), Positives = 43/69 (62%)
 Frame = +1

Query: 205 SACDRCARHSEAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQV 384
           +ACDRC   S+AA+++S+  L++G+C YG+ A SF                 GCGACFQV
Sbjct: 19  NACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQV 78

Query: 385 RCKDKKLCS 411
           RCK+ KLCS
Sbjct: 79  RCKNPKLCS 87

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>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)|
           (Ath-ExpBeta-2.3)
          Length = 263

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = +1

Query: 205 SACDRCARHSEAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQV 384
           +ACDRC   S+A++++S+  L++G+C YG  A SF                 GCGACFQV
Sbjct: 19  NACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQV 78

Query: 385 RCKDKKLCS 411
           RCK+ KLC+
Sbjct: 79  RCKNPKLCN 87

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>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)|
           (Ath-ExpBeta-2.2)
          Length = 265

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 31/70 (44%), Positives = 42/70 (60%)
 Frame = +1

Query: 202 ASACDRCARHSEAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQ 381
           A+ACDRC   S+AA+++S+  L++G+C YG+ A  F                 GCGACFQ
Sbjct: 19  AAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQ 78

Query: 382 VRCKDKKLCS 411
           VRCK+  LCS
Sbjct: 79  VRCKNPTLCS 88

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>EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXPR1) (At-EXPR1)|
           (Ath-ExpBeta-3.1)
          Length = 250

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
 Frame = +1

Query: 229 HSEAAFYTSSLTLA--AGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKK 402
           +S A +Y S    A   G CGYG      N                GCGAC+QVRCK   
Sbjct: 29  NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPP 88

Query: 403 LCS 411
            CS
Sbjct: 89  HCS 91

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>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein|
           SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4)
           (IMP4) (Presenilin-like protein 1)
          Length = 592

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
 Frame = -1

Query: 380 WKHAPQ--PTPPRYRAVPAAASRPPLKEAAAVPYP--QEPAARVSEEV*KAASEWRAQRS 213
           W  AP   P PP+  A P +  +PP +E A  P+P  Q P +R SEE+  A +  R   S
Sbjct: 513 WAPAPADGPQPPKDSATPLSP-QPPSEEPATSPWPAEQSPKSRTSEEM-GAGAPMREPGS 570

Query: 212 QAEASDGREQ 183
            AE S+GR+Q
Sbjct: 571 PAE-SEGRDQ 579

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>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCGACFQVRCKDKKLCS 411
           G+CGYG A A                    GCGAC+QV+C  K  CS
Sbjct: 66  GACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACS 112

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>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 37.0 bits (84), Expect = 0.037
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +1

Query: 274 GSCGYGTAA-ASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKKLCS 411
           G+CGYGT                       GCGAC++VRC DK +CS
Sbjct: 55  GACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICS 101

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>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 36.6 bits (83), Expect = 0.048
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +1

Query: 226 RHSEAAFY---TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           R++ A FY   T   T+  G+CGYG    S                  GCG CFQ+ C  
Sbjct: 38  RYAHATFYGDETGGETMG-GACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSK 96

Query: 397 KKLC 408
              C
Sbjct: 97  SPHC 100

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>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 35.8 bits (81), Expect = 0.082
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +1

Query: 268 AAGSCGYGTAA--ASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKKLCS 411
           + G+CGYG+      F                 GCGAC++VRC DK +CS
Sbjct: 57  SGGACGYGSLVDVKPFKARVGAVSPILFKGGE-GCGACYKVRCLDKTICS 105

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>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCK-DKKLC 408
           G+CGYG   +                  + CGACF++RC+ D K C
Sbjct: 46  GACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWC 91

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>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +1

Query: 226 RHSEAAFY---TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           R + A FY   T S T+  G+CGYG    S                   CG CFQ++C  
Sbjct: 32  RTASATFYGDDTGSATMG-GACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVS 90

Query: 397 KKLC 408
              C
Sbjct: 91  SPNC 94

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>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCK-DKKLC 408
           G+CGYG   +                  + CG+CF++RC+ D K C
Sbjct: 45  GACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWC 90

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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +1

Query: 226 RHSEAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           +++ A FY  S       G+CGYG   +                    CGACF+++C D
Sbjct: 37  QNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTD 95

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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
 Frame = +1

Query: 229 HSEAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           ++ A FY    +     G+CGYG   +                    CGACFQ++C D
Sbjct: 31  NARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVD 88

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>H11_GLYBA (P40263) Histone H1-I|
          Length = 233

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
 Frame = -1

Query: 368 PQPTPPRYRAVPAA---ASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQRSQAEAS 198
           P+P   +  A PAA   A++P  K+AAA P  ++PAA+ S +  KAA++ +A+ +  +++
Sbjct: 160 PKPAVEKKAAKPAAKKAAAKPAAKKAAAKPAAKKPAAKASPK--KAAAKPKAKPTPKKST 217

Query: 197 DGR 189
             +
Sbjct: 218 PAK 220

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>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 361 GCGACFQVRCKDKKLCS 411
           GCG+C++VRCK+K  CS
Sbjct: 93  GCGSCYEVRCKEKPECS 109

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>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)|
           (Fragment)
          Length = 191

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 361 GCGACFQVRCKDKKLCS 411
           GCG+C++VRCK+K  CS
Sbjct: 15  GCGSCYEVRCKEKPECS 31

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>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +1

Query: 226 RHSEAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           R + A +Y  T+      G+CGYG    S                   CGACF++RC D
Sbjct: 41  RPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVD 99

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>H11_GLYSA (P40266) Histone H1-I|
          Length = 233

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = -1

Query: 368 PQPTPPRYRAVPAA---ASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQ 219
           P+P   +  A PAA    ++P  K+AAA P  +EPAA+ S +  KAA++ +A+
Sbjct: 160 PKPAVEKKAAKPAAKKAVAKPAAKKAAAKPAAKEPAAKASPK--KAAAKPKAK 210

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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +1

Query: 229 HSEAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCK 393
           ++ A FY  S       G+CGYG   +                  + CGACF+++C+
Sbjct: 27  NAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQ 83

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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KDKKLC 408
           G+CGYG   +                    CGACF+++C  D K C
Sbjct: 53  GACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWC 98

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>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)|
           (Fragment)
          Length = 232

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
 Frame = -1

Query: 482 LSTRSVRFVLVLARSVTTTLAPA---PLQSFLSLHLTW--KHAPQPTPPRYRAVPAAASR 318
           + + ++R +        TT  P    P    LS HL W  +  P+P PPR    PAA  R
Sbjct: 100 IGSNALRMIQSATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPPPRPLPPR---PPAAQPR 156

Query: 317 PPLKEAAAVPYPQEP 273
           PP       P P  P
Sbjct: 157 PPPSPPPPPPPPPSP 171

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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +1

Query: 226 RHSEAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KD 396
           +++ A FY  S       G+CGYG   +                  + CGACF+++C  D
Sbjct: 32  QNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCAND 91

Query: 397 KKLC 408
            + C
Sbjct: 92  PQWC 95

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>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
            SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
            complex subunit SET1) (SET-domain-containing protein 1A)
          Length = 1707

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = -1

Query: 419  PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPP---LKEAAAVPYPQEPAARVSEEV 249
            P PL S + L   +  A +PTP      PA A RPP      AA    P +      E V
Sbjct: 1289 PRPLLSHILLEHNYALAVKPTP------PAPALRPPEPVPAPAALFSSPADEVLEAPEVV 1342

Query: 248  *KAASEWRAQRSQAEASDGREQ 183
               A E + Q+ Q +  +G E+
Sbjct: 1343 VAEAEEPKPQQLQQQREEGEEE 1364

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>ZN341_HUMAN (Q9BYN7) Zinc finger protein 341|
          Length = 854

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
 Frame = -1

Query: 458 VLVLARSVTTTL------APAPLQSFLSLH-----LTWKHAPQPTPPRYRAVPAAASRPP 312
           VL+ A S  T+L       P P+QS L++H     LT    P P PP     P     PP
Sbjct: 140 VLMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPPPPQPPPP 199

Query: 311 LKEAAAVPYPQEPAARVSEEV*KAAS 234
             ++   P    P      EV  AA+
Sbjct: 200 PPQSLGPPGRPNPGGNGVVEVYSAAA 225

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>POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1839

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -1

Query: 446 ARSVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAV-----PAAASRPPLKEAAAVPYP 282
           A+S    L PAP Q+  S        P P PP + A+     P+ +S PPL+E    P+ 
Sbjct: 564 AQSFLPLLLPAPTQAQAS-------NPAPRPPAFHAIPLPPQPSTSSSPPLQEPTLSPHL 616

Query: 281 QEP 273
             P
Sbjct: 617 IHP 619

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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
 Frame = +1

Query: 232 SEAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KDKK 402
           + A FY  S       G+CGYG   +                    CGACF+++C  D K
Sbjct: 34  AHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPK 93

Query: 403 LC 408
            C
Sbjct: 94  WC 95

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>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
 Frame = +1

Query: 220 CARHSEAAFYTSSLT---------LAAGSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCG 369
           C  H++  + T+ +T            G+CGYG A A                    GCG
Sbjct: 26  CYCHNKTHWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCG 85

Query: 370 ACFQVRCKDKKLCS 411
           AC++++C D  LC+
Sbjct: 86  ACYRLKC-DHPLCT 98

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>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)|
           (Ath-ExpAlpha-1.23)
          Length = 256

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = +1

Query: 253 SSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC 390
           SS     G+CGYG    S                   CGAC +VRC
Sbjct: 42  SSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRC 87

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>RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (Enhancer factor|
           C) (EF-C)
          Length = 979

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -1

Query: 371 APQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQRSQAEASDG 192
           AP P+ P  +A P A  +PP     A P P +P    +    +  +E ++ + QA+   G
Sbjct: 12  APPPSQPP-QAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGG 70

Query: 191 REQ 183
           ++Q
Sbjct: 71  QKQ 73

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>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           G+CGYG                      + CGAC++++C D
Sbjct: 49  GACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCND 89

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>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional|
           corepressor Sin3a) (Histone deacetylase complex subunit
           Sin3a)
          Length = 1273

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -1

Query: 368 PQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSE 255
           PQP PP++ + P+A S P    A A P PQ P A+VS+
Sbjct: 220 PQP-PPQHPSQPSAQSAP----APAQPAPQPPPAKVSK 252

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>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           G+CGYG   +                    CGACF++ C+D
Sbjct: 51  GACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELTCED 91

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
 Frame = -1

Query: 479 STRSVRFVLVLARSVTTTLAPAPLQSFLSLHLTWKHAPQP-------------TPPRYRA 339
           S   +RF   L R   +T     ++S  SL  T + AP P             TP   RA
Sbjct: 488 SDLELRFAQELGRIRRSTSREELVRSHESLRATLQRAPSPREPGEPPLFSRPSTPKTSRA 547

Query: 338 VPAAASRPPLKEAAAVP--YPQEPAAR 264
           V  AA++PP   +A  P   P  P +R
Sbjct: 548 VSPAAAQPPSPSSAEKPGDEPGRPRSR 574

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>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCGACFQVRCKDKKLCS 411
           G+CGYG+A A+                   GCG C+QV C     CS
Sbjct: 52  GACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACS 98

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>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)|
          Length = 1845

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = -1

Query: 440 SVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAA----AVPYPQEP 273
           S +T+  PAP  S  S H   K  P P PP+  A  +A +      A+      P P+ P
Sbjct: 227 SASTSRKPAPASSSNSKHAPAKMPPPPPPPKAPARKSATTHETRPSASRSRRRSPSPRRP 286

Query: 272 A 270
           A
Sbjct: 287 A 287

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>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 421

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
 Frame = -1

Query: 482 LSTRSVRFVLVLARSVTTTLAPA---PLQSFLSLHLTW--KHAPQPTPPRYRAV--PAAA 324
           + + ++R +        TT  P    P    +S HL W  +  P+P PPR  A   P   
Sbjct: 289 IGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPP 348

Query: 323 SRPPLKEAAAVPYPQEP 273
           S PP     A P P  P
Sbjct: 349 SPPPPPPPPASPLPPPP 365

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>FAS2_YEAST (P19097) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:|
           Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase
           (EC 1.1.1.100) (Beta-ketoacyl reductase);
           3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
           (Beta-ketoacyl synth
          Length = 1887

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -1

Query: 377 KHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAA 237
           + AP PTP      PAAA+  P+  AA    P   AA +++E  KA+
Sbjct: 106 EEAPAPTPAASAPAPAAAAPAPVAAAA----PAAAAAEIADEPVKAS 148

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>Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410|
          Length = 279

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = -1

Query: 389 HLTWKHAPQPTPPRYRAVPAAAS-RPPLKEA----AAVPYPQEPAARVSEEV*KAASEWR 225
           H   +H P P PP +  +PA  S RPP  +A     A+P PQ           +  SE  
Sbjct: 130 HAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQ-----------RERSEDP 178

Query: 224 AQRSQAEASDG 192
            + S AEA  G
Sbjct: 179 METSSAEAGGG 189

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>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = -1

Query: 377 KHAPQPTP-----PRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQRS 213
           K  P+P P     P  +  P  A+ P  +  A++  P+E AAR +EE  +AA   R +  
Sbjct: 135 KPEPKPEPKVEAKPEPKPEPKPAAAPAPRTVASILSPEEIAAREAEEKRQAAFRARQEAL 194

Query: 212 QAEASDGREQ 183
             E  +  E+
Sbjct: 195 MREKIEREER 204

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>CEBPE_SHEEP (O77728) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 395 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQR 216
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K + E+R +R
Sbjct: 152 AMHLPPGLASPSQPLRVLKAPLAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 215 SQ 210
            +
Sbjct: 212 ER 213

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>CEBPE_RAT (P56261) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
           (C/EBP-related protein 1)
          Length = 281

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 395 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQR 216
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K + E+R +R
Sbjct: 152 AVHLPPTLAAPGQPLRVLKAPVAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 215 SQ 210
            +
Sbjct: 212 ER 213

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>CEBPE_MOUSE (Q6PZD9) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 395 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAASEWRAQR 216
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K + E+R +R
Sbjct: 152 AVHLPPTLAAPGQPLRVLKAPVAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 215 SQ 210
            +
Sbjct: 212 ER 213

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>Y2232_MYCBO (P64954) Hypothetical protein Mb2232|
          Length = 512

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -1

Query: 365 QPTPPRYR-AVPAAASRP-PLKEAAAVPYPQEPAARVSE 255
           +P PP  R +   AA RP P K AAA+P P+ PA  V E
Sbjct: 463 RPAPPLNRPSCRRAARRPAPGKPAAALPQPRHPAVGVRE 501

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>Y2209_MYCTU (P64953) Hypothetical protein Rv2209/MT2265|
          Length = 512

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -1

Query: 365 QPTPPRYR-AVPAAASRP-PLKEAAAVPYPQEPAARVSE 255
           +P PP  R +   AA RP P K AAA+P P+ PA  V E
Sbjct: 463 RPAPPLNRPSCRRAARRPAPGKPAAALPQPRHPAVGVRE 501

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>TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Antigen tmpB)|
          Length = 384

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -1

Query: 344 RAVPAAASRPPLKEAAAVPYPQEPAARVS--EEV*KAASEWRAQRSQAE 204
           +A   AA+R   +EAAA    +E AAR++  EE  + A+E  A R  AE
Sbjct: 240 KAAEEAAARKAAEEAAARKAAEEEAARIAAEEEAARKAAEEEAARKAAE 288

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>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)|
           (Ath-ExpAlpha-1.10)
          Length = 258

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = +1

Query: 229 HSEAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC 390
           ++ A FY    +     G+CGYG   +                  + CG+CF+++C
Sbjct: 34  NAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKC 89

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>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +1

Query: 274 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KDKKLC 408
           G+CGYG   +                  + CGACF++ C  D + C
Sbjct: 57  GACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWC 102

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>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = -1

Query: 422  APAPLQSFLSLHLTWKHAPQPTPPRYRAVPAA----ASRPPLKEAAAV--PYPQEPAARV 261
            AP P ++   L  +    P P P   R  PAA    AS PP + A+ V  P P  PA  V
Sbjct: 1282 APKPAKALAGLQSS-SATPSPVPSPARQPPAALIKPASSPPSQSASPVKPPSPGTPALHV 1340

Query: 260  SEEV*KAAS 234
              +  +AA+
Sbjct: 1341 PAKPPRAAA 1349

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 419 PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 267
           P P +     HL  +HA    P  + A+P   SRP  + AA  P P  P A
Sbjct: 842 PQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPTRPPA 891

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>FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
           (Transcription factor FKH-1) (Mesoderm/mesenchyme
           forkhead 1) (MF-1)
          Length = 553

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 374 HAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSE 255
           H  +P PP+    PA A  PP +   + P PQ P  R+ +
Sbjct: 190 HLQEPPPPQAGRQPAPA--PPEQAEGSAPGPQPPPVRIQD 227

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>VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein]
          Length = 621

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 371 APQPTPPRYRAVPAAASRP-PLKEAAAVPYPQEPAARVSEEV*KAASEWRAQRSQA 207
           AP   P +  +VPA A+ P  +  AAAV  P+EP    + +    AS   AQ  QA
Sbjct: 551 APAQAPAQALSVPAVAAAPATVAAAAAVGPPEEPGVAATVDASAMASLPPAQPPQA 606



 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/91 (29%), Positives = 34/91 (37%)
 Frame = -1

Query: 464 RFVLVLARSVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPY 285
           + V+  AR    T AP P   FL        AP P P  Y A  AA   P         Y
Sbjct: 343 QLVVSQARGAAMTAAPPPAPYFLPAAAAAAAAPPPMPGWYGAAGAAPWHP--------GY 394

Query: 284 PQEPAARVSEEV*KAASEWRAQRSQAEASDG 192
              P    S+ +  A +    +R QA  +DG
Sbjct: 395 GFPPPGLESQIMALAGAIADGRRVQAHGADG 425

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>FBLI1_PONPY (Q5REN1) Filamin-binding LIM protein 1|
          Length = 375

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = -1

Query: 422 APAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*K 243
           APAP+ + L   L   H   P PP     P  A RP ++ +   P  +E     +E V K
Sbjct: 121 APAPMGASLIADLEQLHLSPPLPPPPPQAP--AERPSVQPSPLRPMEEELPPPPAERVEK 178

Query: 242 AAS 234
            AS
Sbjct: 179 GAS 181

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>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1|
          Length = 246

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
 Frame = +1

Query: 232 SEAAFYTSSLTLAA-----GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 396
           + A FY S+   AA     G+CGY                       +GC AC++++CK+
Sbjct: 21  ARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKCKE 80

Query: 397 KKLCS 411
              CS
Sbjct: 81  PVECS 85

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 419 PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 267
           P P +     HL  +HA    P  + A+P   SRP  + AA  P P  P A
Sbjct: 840 PQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPA 889



 Score = 28.9 bits (63), Expect = 10.0
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = -1

Query: 455 LVLARSVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYP 282
           L++   V T + P PLQ+   +       PQP PP   A     S PP+   AA P P
Sbjct: 232 LIVQTPVMTVVPPQPLQTPPPV------PPQPQPPPAPAPQPVQSHPPI--IAATPQP 281

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 371 APQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVS 258
           +PQPTP      PA AS+ P+    A P  + P+ + S
Sbjct: 569 SPQPTPKAASVQPATASKSPVPSQQASPKKELPSKQDS 606

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>IF2_AZOSE (Q5NZS1) Translation initiation factor IF-2|
          Length = 945

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 368 PQPTP-PRYRAVPAAA-SRPPLKEAAAVPYPQEPAARVS--EEV*KAASEWRAQRSQ 210
           PQP P PR    PA   S  P K  A V  P  P  RVS   +  +AA E  A+R Q
Sbjct: 173 PQPEPEPRPEPEPATVESGAPAKPEAPVRAPSRPPLRVSILSDEERAAREREARRHQ 229

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>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)|
          Length = 263

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 361 GCGACFQVRCKDKKLCS 411
           GCG+CF+++C   + CS
Sbjct: 91  GCGSCFEIKCSKPEACS 107

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>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)|
          Length = 263

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +1

Query: 274 GSCGYGTA-AASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKKLCS 411
           G+CGY     A FN                GCG+CF+++C   + CS
Sbjct: 62  GACGYKNVDKAPFNGMTGCGNTPIFKDGR-GCGSCFEIKCTKPESCS 107

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>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)|
          Length = 1430

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = -1

Query: 422  APAPLQSFLSLHLTWKHAPQPTPPRYRAVPAA----ASRPPLKEA--AAVPYPQEPAARV 261
            AP P ++   L  +    P P P   R  PAA    AS PP + A  A  P P  PA +V
Sbjct: 1281 APKPAKALAGLQSS-SATPSPVPSPARQPPAALIKPASSPPSQSASPAKPPSPGAPALQV 1339

Query: 260  SEEV*KAAS 234
              +  +AA+
Sbjct: 1340 PTKPPRAAA 1348

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>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -1

Query: 380 WKHAPQPTPP---RYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAA 237
           W+ + QP PP   R R V  A   PPL   A  P P +P A   E    AA
Sbjct: 194 WRGSEQPDPPGGQRTRGVRQAP--PPLMTLAIAPPPADPRAPAPERKAPAA 242

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>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific|
           homeobox protein 2)
          Length = 340

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 374 HAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 267
           + P   PP   A+P AA +PPL  A   P P  P A
Sbjct: 50  YRPVVLPPPPPALPQAALQPPLPPAPPPPLPALPGA 85

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>TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 558

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 368 PQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARV 261
           P+P PPR  AVP   SRPP       P PQ+P + V
Sbjct: 330 PEPRPPRRIAVP---SRPP-------PAPQQPPSMV 355

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>NAGS_HUMAN (Q8N159) N-acetylglutamate synthase, mitochondrial precursor (EC|
           2.3.1.1) (Amino-acid acetyltransferase) [Contains:
           N-acetylglutamate synthase long form; N-acetylglutamate
           synthase short form; N-acetylglutamate synthase
           conserved domain form]
          Length = 534

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -1

Query: 392 LHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEE 252
           L   W   PQP P  Y      +  P  +E + VP P+ P    S E
Sbjct: 49  LSTAWSQ-PQPPPEEYAGADDVSQSPVAEEPSWVPSPRPPVPHESPE 94

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>DPO3X_ECOLI (P06710) DNA polymerase III tau subunit (EC 2.7.7.7) [Contains: DNA|
           polymerase III gamma subunit]
          Length = 643

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 28/115 (24%), Positives = 46/115 (40%)
 Frame = -1

Query: 413 PLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAAS 234
           P QSF  +  T    P   PP+ ++ P  A   PL E  +    Q  AAR  +++ +   
Sbjct: 371 PRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTS----QVLAAR--QQLQRVQG 424

Query: 233 EWRAQRSQAEASDGREQXXXXXXXXXXXXGVDGDEPRQTETAIFSFPFSKAE*RW 69
             +A++S+  A+  R +              D  + R   +A+   P  K   RW
Sbjct: 425 ATKAKKSEPAAAT-RARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRW 478

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>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)|
          Length = 263

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 361 GCGACFQVRCKDKKLCS 411
           GCG+CF+++C   + CS
Sbjct: 91  GCGSCFEIKCTKPEACS 107

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>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 422  APAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQ 279
            +P P Q+ +++      APQP P   +  P     PP   A  +P PQ
Sbjct: 3188 SPTPAQATMAM------APQPPPQPQQPQPPVQQPPPPPAAQQIPAPQ 3229

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>Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)|
          Length = 875

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/49 (28%), Positives = 17/49 (34%)
 Frame = -1

Query: 419 PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEP 273
           P P Q F      W   P   PP     P    +PP +     P P +P
Sbjct: 86  PPPPQPFYPYGQYWPQQPPQPPPDQPQQPQPPQQPPQQPPQQQPQPPQP 134

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>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3259

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
 Frame = -1

Query: 479 STRSVRFVLVLARSVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKE- 303
           S   +RF   L R   +T     ++S  SL  T + AP P  P     P   SRP + + 
Sbjct: 493 SDLELRFAQELGRIRRSTSREELVRSHESLRATLQRAPSPREP---GEPPLFSRPSIPKT 549

Query: 302 ------AAAVPYPQEPAARVSEEV*KAASEWRAQRSQAEASDGREQ 183
                 AA  P P   A +  +E  +  S  R    + E  +G +Q
Sbjct: 550 SRAVSPAATQPPPPSGAGKSGDETGRPRS--RGPVGRTEPGEGPQQ 593


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,144,656
Number of Sequences: 219361
Number of extensions: 528476
Number of successful extensions: 3634
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3558
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result