ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart32d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CTPA_MYCTU (Q10876) Cation-transporting P-type ATPase A (EC 3.6.... 30 7.2
2MERP_SALTI (P0A216) Mercuric transport protein periplasmic compo... 29 9.4
3MERP_ENTCL (P0A218) Mercuric transport protein periplasmic compo... 29 9.4
4MERP_ENTAG (P0A217) Mercuric transport protein periplasmic compo... 29 9.4
5MERP_ACICA (Q52107) Mercuric transport protein periplasmic compo... 29 9.4

>CTPA_MYCTU (Q10876) Cation-transporting P-type ATPase A (EC 3.6.3.-)|
          Length = 761

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 330 QTVELKVR-MCCSGCARVVKHALTKLRGXXXXXXXXXXXXXXXTG-YVERHRVLKEVRRA 503
           Q ++L++  M CS CA  V+  L KL G               T   V+   + + VRRA
Sbjct: 14  QRIQLRISGMSCSACAHRVESTLNKLPGVRAAVNFGTRVATIDTSEAVDAAALCQAVRRA 73

Query: 504 GKKAE 518
           G +A+
Sbjct: 74  GYQAD 78



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>MERP_SALTI (P0A216) Mercuric transport protein periplasmic component precursor|
           (Periplasmic mercury ion-binding protein) (Mercury
           scavenger protein)
          Length = 91

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 330 QTVELKVR-MCCSGCARVVKHALTKLRG 410
           QTV L V  M C+ C   VKHAL+K+ G
Sbjct: 22  QTVTLSVPGMTCASCPITVKHALSKVEG 49



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>MERP_ENTCL (P0A218) Mercuric transport protein periplasmic component precursor|
           (Periplasmic mercury ion-binding protein) (Mercury
           scavenger protein)
          Length = 91

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 330 QTVELKVR-MCCSGCARVVKHALTKLRG 410
           QTV L V  M C+ C   VKHAL+K+ G
Sbjct: 22  QTVTLSVPGMTCASCPITVKHALSKVEG 49



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>MERP_ENTAG (P0A217) Mercuric transport protein periplasmic component precursor|
           (Periplasmic mercury ion-binding protein) (Mercury
           scavenger protein)
          Length = 91

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 330 QTVELKVR-MCCSGCARVVKHALTKLRG 410
           QTV L V  M C+ C   VKHAL+K+ G
Sbjct: 22  QTVTLSVPGMTCASCPITVKHALSKVEG 49



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>MERP_ACICA (Q52107) Mercuric transport protein periplasmic component precursor|
           (Periplasmic mercury ion-binding protein) (Mercury
           scavenger protein)
          Length = 91

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 330 QTVELKVR-MCCSGCARVVKHALTKLRG 410
           QTV L V  M C+ C   VKHAL+K+ G
Sbjct: 22  QTVTLSVPGMTCASCPITVKHALSKVEG 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,489,948
Number of Sequences: 219361
Number of extensions: 496077
Number of successful extensions: 1818
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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