Clone Name | bart32d01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SRS1_ORYSA (P83649) Salt-stress root protein RS1 | 130 | 3e-30 |
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>SRS1_ORYSA (P83649) Salt-stress root protein RS1| Length = 204 Score = 130 bits (326), Expect = 3e-30 Identities = 73/129 (56%), Positives = 79/129 (61%), Gaps = 1/129 (0%) Frame = +2 Query: 110 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 289 MTSVWKTKVL GL+ EFLKSFN TELEPKVVE +E+S Sbjct: 1 MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60 Query: 290 PPEXXXXXXXXXXXXXXX-NSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 466 PPE N AV KFL+E+AKI FPGAK VSDAV KSGTTPLSPAI F Sbjct: 61 PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120 Query: 467 ILDKVAPFV 493 IL+KVAPFV Sbjct: 121 ILEKVAPFV 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,353,110 Number of Sequences: 219361 Number of extensions: 806331 Number of successful extensions: 2373 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2372 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)