Clone Name | bart32a05 |
---|---|
Clone Library Name | barley_pub |
>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)| Length = 518 Score = 32.7 bits (73), Expect = 0.67 Identities = 24/60 (40%), Positives = 26/60 (43%) Frame = -2 Query: 429 ASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPASQGVALRAREGE 250 A PA A P A A+ A A A A P +PA A AP A A A A EGE Sbjct: 455 APPADGAAPPAEAAAAPADAAAPAAEAAPAEAPAAEATAAEAPPAEAAPAEAAPAAAEGE 514
>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein| dromsopa) Length = 83 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/55 (41%), Positives = 23/55 (41%) Frame = -2 Query: 450 VALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 286 VAL P PA P A A A AAA P A PAP AP A PA Sbjct: 15 VALARPQEDPANLPAPEAAAAPPAAAAAPPAAAAAPPAPPAPPAA---APQAAPA 66
>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent| kinase inhibitor p57) (p57KIP2) Length = 316 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = -2 Query: 438 APLASPAPWAQPNAVVQASGAR-A*QGVAAAHPLASPAPRGVALR--APLALPASQGVAL 268 AP +PAP P+A Q S + A QG PLA G++ R A A ++ G A+ Sbjct: 205 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAI 264 Query: 267 RAREGEVV 244 + G ++ Sbjct: 265 KKLSGPLI 272 Score = 30.4 bits (67), Expect = 3.3 Identities = 22/55 (40%), Positives = 24/55 (43%) Frame = -2 Query: 450 VALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 286 V AP +PAP A P A A A A P +PAP VA AP PA Sbjct: 153 VLAPAPAPAPAPVAAPVAAPVAVAVLA--PAPAPAPAPAPAPAPVAAPAPAPAPA 205 Score = 29.3 bits (64), Expect = 7.5 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 435 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 286 P+ +PAP P V A+ A VA P +PAP AP+A PA Sbjct: 152 PVLAPAPAPAPAPV--AAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPA 199
>FTSZ1_RHIME (P30327) Cell division protein ftsZ homolog 1| Length = 590 Score = 30.8 bits (68), Expect = 2.6 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%) Frame = -2 Query: 450 VALQAPLASPAPWAQPNAVVQA--------SGARA*QGVAAAHPLASPAPRGVALRAPLA 295 +A +A +A+PAP QP+ +A +G + P A PAPR V ++AP+ Sbjct: 394 IAARAQVAAPAPQPQPHLQEEAFRPQSKLFAGVAPTEAAPVMRP-AQPAPRPVEMQAPVQ 452 Query: 294 LPASQGVALRAREGEVVQ 241 P Q ++ +VV+ Sbjct: 453 -PQMQAQPVQQEPTQVVR 469
>FBLN4_MOUSE (Q9WVJ9) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (Mutant p53-binding protein 1) Length = 443 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 11 CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLH 115 CL++ +A K E G LCLPR +A + LH Sbjct: 58 CLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLH 92
>FBLN4_HUMAN (O95967) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (UPH1 protein) Length = 443 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 11 CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLH 115 CL++ +A K E G LCLPR +A + LH Sbjct: 58 CLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLH 92
>FBLN4_CRIGR (O55058) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (H411 protein) Length = 443 Score = 30.4 bits (67), Expect = 3.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 11 CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLH 115 CL++ +A K E G LCLPR +A + LH Sbjct: 58 CLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLH 92
>IF2_PSEPK (Q88DV7) Translation initiation factor IF-2| Length = 846 Score = 29.6 bits (65), Expect = 5.7 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -2 Query: 390 QASGARA*QGVAAAHPLASPAPRGVALRAPLA--LPASQGVALRARE 256 QA+G+ A AA P +PA VA AP+ PAS+ A RA E Sbjct: 137 QAAGSAAAAPAPAAKPEPAPAAAPVAAPAPVVADAPASEDAAARAAE 183
>HSP1_CYNVA (Q8WP00) Sperm protamine P1| Length = 46 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +1 Query: 415 RCRRRQRSLKCHTPWRRRCQSMSCRR 492 RCRRR+RS + RRR SCRR Sbjct: 11 RCRRRRRSCRRRRRCRRRRARRSCRR 36
>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11| Length = 154 Score = 29.3 bits (64), Expect = 7.5 Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 8/107 (7%) Frame = -2 Query: 429 ASPAPWAQ----PNAVVQASGARA*QGVAAA----HPLASPAPRGVALRAPLALPASQGV 274 ASP+P A P Q+S A AAA HP A+P P G + AP SQG Sbjct: 7 ASPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTPMGAPMGAP-----SQGP 61 Query: 273 ALRAREGEVVQXXXXXXXXXXXXXXXXXAPGRSDVVDTPSRAQPPLG 133 L + G S P+ A P G Sbjct: 62 GLMKQMAATAGGVAIGSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAG 108
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 28.9 bits (63), Expect = 9.7 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +3 Query: 351 LPPHPAMPELPKPELPHL 404 LPP PA+P P+P PHL Sbjct: 992 LPPQPALPVRPEPLQPHL 1009
>FTSKL_DEIRA (Q9RXB5) Hypothetical ftsK-like protein DR0400| Length = 980 Score = 28.9 bits (63), Expect = 9.7 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -2 Query: 435 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAP--LALPASQ 280 P++SP P P + AS + A A +PAP GV+ R LALP+ Q Sbjct: 452 PVSSPGPSPVPVSPASASVSHAAPWEEPAAGRPAPAPSGVSRRGATRLALPSEQ 505
>I3MS_BRANA (Q00650) Microspore-specific protein I3| Length = 156 Score = 28.9 bits (63), Expect = 9.7 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -2 Query: 435 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVA 313 P A+ AP A P A A+ A A A P A+PAP+ A Sbjct: 112 PGAAAAPRAAPAAAPAAAPAAAPAAAPAPKPAAAPAPKPAA 152
>PRTC1_PORGI (P59916) Collagenase precursor (EC 3.4.-.-)| Length = 334 Score = 28.9 bits (63), Expect = 9.7 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +2 Query: 65 HGLLCLPRGSAALMQLHEQCNTTPRGGCAR 154 HG LC+ + LHE ++ RG CA+ Sbjct: 96 HGALCMAVSGKCYLSLHEHNSSANRGACAQ 125 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,953,060 Number of Sequences: 219361 Number of extensions: 1188125 Number of successful extensions: 4282 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3879 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4256 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)