Clone Information

BLAST Search Result

Clone Name	bart32a04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	YH09_YEAST (P38892) Hypothetical 33.8 kDa protein in TWT1-FLO5 i...	75	1e-13
2	YE05_YEAST (P32643) Hypothetical 34.8 kDa protein in RAD24-BMH1 ...	63	6e-10
3	Y3374_MYCBO (P65349) Putative methyltransferase Mb3374 (EC 2.1.1.-)	58	2e-08
4	Y3342_MYCTU (P65348) Putative methyltransferase Rv3342/MT3445 (E...	58	2e-08
5	SMTA_ECOLI (P36566) Protein smtA	37	0.057
6	PRMA_CLOTE (Q892R2) Ribosomal protein L11 methyltransferase (EC ...	35	0.22
7	PRMA_CLOAB (P45558) Ribosomal protein L11 methyltransferase (EC ...	33	0.83
8	CJ095_HUMAN (Q9H7T3) Protein C10orf95	33	0.83
9	GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4) (Endo...	32	1.1
10	UBIE_SYNY3 (P72818) Menaquinone biosynthesis methyltransferase u...	32	1.1
11	KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subu...	32	1.4
12	TPIS_METAC (Q8THB0) Triosephosphate isomerase (EC 5.3.1.1) (TIM)...	32	1.8
13	UBIE_TROWT (P67064) Menaquinone biosynthesis methyltransferase u...	32	1.8
14	UBIE_TROW8 (P67065) Menaquinone biosynthesis methyltransferase u...	32	1.8
15	Y829_SYNY3 (Q55423) Putative methyltransferase sll0829 (EC 2.1.1.-)	31	2.4
16	COQ3_SCHPO (O74421) Hexaprenyldihydroxybenzoate methyltransferas...	31	2.4
17	UBIG_BARQU (Q6G0I1) 3-demethylubiquinone-9 3-methyltransferase (...	31	2.4
18	HEMK_MYCLE (P45832) Protein hemK homolog (EC 2.1.1.-) (M.MleHemKP)	31	3.2
19	UBIG_BURPS (Q63RZ8) 3-demethylubiquinone-9 3-methyltransferase (...	31	3.2
20	UBIG_BURMA (Q62M18) 3-demethylubiquinone-9 3-methyltransferase (...	31	3.2
21	PRMA_THET8 (Q84BQ9) Ribosomal protein L11 methyltransferase (EC ...	31	3.2
22	FTSY_HAEIN (P44870) Cell division protein ftsY homolog	31	3.2
23	Y092_MYCBO (P65347) Putative methyltransferase Mb0092 (EC 2.1.1.-)	31	3.2
24	Y089_MYCTU (P65346) Putative methyltransferase Rv0089/MT0098 (EC...	31	3.2
25	IGHA2_HUMAN (P01877) Ig alpha-2 chain C region	31	3.2
26	HEMK_MYCTU (Q10602) Protein hemK homolog (EC 2.1.1.-) (M.MtuHHemKP)	30	4.1
27	SALL1_HUMAN (Q9NSC2) Sal-like protein 1 (Zinc finger protein SAL...	30	4.1
28	Y912_HAEIN (P44074) Hypothetical protein HI0912	30	4.1
29	TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit T...	30	4.1
30	UBIG_BRUSU (Q8FYK0) 3-demethylubiquinone-9 3-methyltransferase (...	30	4.1
31	GLMM_VIBPA (Q87LZ7) Phosphoglucosamine mutase (EC 5.4.2.10)	30	5.4
32	UBIG_BRAJA (Q89XU2) 3-demethylubiquinone-9 3-methyltransferase (...	30	5.4
33	PRMA_BACHD (Q9KD70) Ribosomal protein L11 methyltransferase (EC ...	30	5.4
34	NFRA_ECOLI (P31600) Bacteriophage N4 adsorption protein A precursor	30	7.0
35	MLTB_ECOLI (P41052) Membrane-bound lytic murein transglycosylase...	30	7.0
36	MOXR_PARDE (P29901) Protein moxR	29	9.2
37	GLMM_VIBCH (Q9KU84) Phosphoglucosamine mutase (EC 5.4.2.10)	29	9.2
38	PRMA_GEOSL (Q74G05) Ribosomal protein L11 methyltransferase (EC ...	29	9.2
39	KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subuni...	29	9.2
40	IGHA1_HUMAN (P01876) Ig alpha-1 chain C region	29	9.2
41	IGHA1_GORGO (P20758) Ig alpha-1 chain C region	29	9.2

>YH09_YEAST (P38892) Hypothetical 33.8 kDa protein in TWT1-FLO5 intergenic|
           region
          Length = 291

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
 Frame = +2

Query: 89  QAKHYAAARPDYPAELFQFIAS--KTARHDLAWDVGTGSGQAAVSLAKLYKKVVGTDTSA 262
           ++ HY   RP YP  L   I    K  R  L  D+G G+G+A   +   +K+V+G D S+
Sbjct: 12  ESAHYNNVRPSYPLSLVNEIMKFHKGTRKSLV-DIGCGTGKATFVVEPYFKEVIGIDPSS 70

Query: 263 QQLAYAPALPN-------VRYAHTPADLPLEGIHAAVAPPGSVDVVTVAQAFHWLDLPRF 421
             L+ A    N       +R+ + P +  L  I      P SVD+V  A+A HW +L R 
Sbjct: 71  AMLSIAEKETNERRLDKKIRFINAPGE-DLSSIR-----PESVDMVISAEAIHWCNLERL 124

Query: 422 YAQTRSLLRAHGVLAAWCYTEP 487
           + Q  S+LR+ G  A W Y +P
Sbjct: 125 FQQVSSILRSDGTFAFWFYIQP 146

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>YE05_YEAST (P32643) Hypothetical 34.8 kDa protein in RAD24-BMH1 intergenic|
           region
          Length = 299

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
 Frame = +2

Query: 92  AKHYAAARPDYPAELFQFIAS-KTARHDLAWDVGTGSGQAAVSLA---KLYKKVVGTDTS 259
           ++ Y+++RP YP++ ++ I         L  DVG G G A + +A   K +++++G+D S
Sbjct: 11  SERYSSSRPSYPSDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS 70

Query: 260 AQQLAYAPALP--------NVRYAHTPADLPLEGIHAAVAPPGSVDVVTVAQAFHWLDLP 415
           A  +  A  +         NV +  + +D   + + A       +D++T  +  HW D  
Sbjct: 71  ATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQKIDMITAVECAHWFDFE 129

Query: 416 RFYAQTRSLLRAHGVLAAWCYTEP 487
           +F     + LR  G +A W Y +P
Sbjct: 130 KFQRSAYANLRKDGTIAIWGYADP 153

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>Y3374_MYCBO (P65349) Putative methyltransferase Mb3374 (EC 2.1.1.-)|
          Length = 243

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
 Frame = +2

Query: 62  REMANLFLKQAKHYAAARPDYPAELFQFIASKTARHDLAWDVGTGSGQAAVSLAKLYKKV 241
           R+M+  F      Y   RP YP E   ++    AR  L  D+G G+G+    L +    V
Sbjct: 6   RDMSLSFGSAVGAYERGRPSYPPEAIDWLLPAAARRVL--DLGAGTGKLTTRLVERGLDV 63

Query: 242 VGTDTSAQQL-AYAPALPN-VRYAHTPADLPLEGIHAAVAPPGSVDVVTVAQAFHWLDLP 415
           V  D   + L     ALP  V    T  ++PL+          SVD V VAQA+HW+D  
Sbjct: 64  VAVDPIPEMLDVLRAALPQTVALLGTAEEIPLDD--------NSVDAVLVAQAWHWVDPA 115

Query: 416 RFYAQTRSLLRAHGVLA-AWCYTEPRVG 496
           R   +   +LR  G L   W   + R+G
Sbjct: 116 RAIPEVARVLRPGGRLGLVWNTRDERLG 143

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>Y3342_MYCTU (P65348) Putative methyltransferase Rv3342/MT3445 (EC 2.1.1.-)|
          Length = 243

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
 Frame = +2

Query: 62  REMANLFLKQAKHYAAARPDYPAELFQFIASKTARHDLAWDVGTGSGQAAVSLAKLYKKV 241
           R+M+  F      Y   RP YP E   ++    AR  L  D+G G+G+    L +    V
Sbjct: 6   RDMSLSFGSAVGAYERGRPSYPPEAIDWLLPAAARRVL--DLGAGTGKLTTRLVERGLDV 63

Query: 242 VGTDTSAQQL-AYAPALPN-VRYAHTPADLPLEGIHAAVAPPGSVDVVTVAQAFHWLDLP 415
           V  D   + L     ALP  V    T  ++PL+          SVD V VAQA+HW+D  
Sbjct: 64  VAVDPIPEMLDVLRAALPQTVALLGTAEEIPLDD--------NSVDAVLVAQAWHWVDPA 115

Query: 416 RFYAQTRSLLRAHGVLA-AWCYTEPRVG 496
           R   +   +LR  G L   W   + R+G
Sbjct: 116 RAIPEVARVLRPGGRLGLVWNTRDERLG 143

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>SMTA_ECOLI (P36566) Protein smtA|
          Length = 261

 Score = 36.6 bits (83), Expect = 0.057
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAP-------ALPNVRYAHTPADLPLEGI 340
           D G G GQ A+ +A+   +V+  D SAQ +  A           N+++ H  A    + +
Sbjct: 50  DAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA----QDV 105

Query: 341 HAAVAPPGSVDVVTVAQAFHWLDLPRFYAQTR-SLLRAHGVLAAWCY 478
            + +  P  VD++       W+  PR   QT  S+LR  GVL+   Y
Sbjct: 106 ASHLETP--VDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 150

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>PRMA_CLOTE (Q892R2) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 314

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +2

Query: 170 DLAWDVGTGSGQAAVSLAKL-YKKVVGTDTSAQQLAYAPALPNVRYAH 310
           D+ +D+GTGSG   ++ AKL  KKV+G D    ++A   A  NV + H
Sbjct: 181 DVVFDIGTGSGILGIAAAKLNAKKVIGVD--LDEVAVDSAKKNVGFNH 226

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>PRMA_CLOAB (P45558) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 311

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +2

Query: 179 WDVGTGSGQAAVSLAKL-YKKVVGTDTSAQQLAYAPALPNVRY 304
           +D+GTGSG  A++ AKL  KKV+G D  +  +A   A  N++Y
Sbjct: 181 FDIGTGSGILAIAAAKLNAKKVLGVDLDS--VAVKAAKENIQY 221

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>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 22/66 (33%), Positives = 30/66 (45%)
 Frame = -1

Query: 516 KTASTAAPTRGSV*HHAASTPCARRRERVCA*KRGRSSQWNACATVTTSTEPGGATAAWM 337
           +TA T APT  S    AA++ C RRR    +     S    A  T  T+ +PG   +A  
Sbjct: 194 RTAPTPAPTCASP--SAAASSCCRRRRACSSPTTAWSGACGAGPTAATAAQPGKPRSAAA 251

Query: 336 PSSGRS 319
           P   R+
Sbjct: 252 PGRARA 257

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>GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase B) (Cellulase B)
          Length = 1045

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/60 (40%), Positives = 28/60 (46%)
 Frame = -1

Query: 387 ATVTTSTEPGGATAAWMPSSGRSAGVWAYRTLGRAGA*ASCCALVSVPTTFLYSFASETA 208
           A+  TST   GAT AW PS+G  A V  Y  L   G   +  A  +VPT  L      TA
Sbjct: 757 ASAVTST---GATLAWAPSTGDPA-VSGYDVLRVQGTTTTVVAQTTVPTVTLSGLTPSTA 812

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>UBIE_SYNY3 (P72818) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 238

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
 Frame = +2

Query: 170 DLAWDVGTGSGQAAVSLAKLYK---KVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGI 340
           D   DV  GSG  A   AK+     KVVG D  A+ LA A      +YAH P    L+G 
Sbjct: 54  DRLLDVCCGSGDLAFQGAKVVGTRGKVVGLDFCAELLAIAAGKHKSKYAHLPMQW-LQG- 111

Query: 341 HAAVAPPGSVDVVTVAQAFHWL----DLPRFYAQTRSLLRAHGVLAAWCYTEPRVGAAVD 508
             A+A P S +    A   + L    ++P+   + + +L+    +A   + +P  G A+ 
Sbjct: 112 -DALALPFSDNEFDGATMGYGLRNVGNIPQALTELQRVLKPGKKVAILDFHQP--GNALA 168

Query: 509 AVFWRLY 529
           A F R Y
Sbjct: 169 ANFQRWY 175

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>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 404

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 28/79 (35%), Positives = 32/79 (40%)
 Frame = -1

Query: 414 GRSSQWNACATVTTSTEPGGATAAWMPSSGRSAGVWAYRTLGRAGA*ASCCALVSVPTTF 235
           G S      A V     PGGA      S+GR  G+  YR LG+ G   SC  L     TF
Sbjct: 47  GGSGPKARAAVVPGPPAPGGAVRE---STGRGTGM-KYRNLGKCGVRVSCLGL-GTWVTF 101

Query: 234 LYSFASETAAWPLPVPTSH 178
               + ETA   L V   H
Sbjct: 102 GSQISDETAEDVLTVAYEH 120

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>TPIS_METAC (Q8THB0) Triosephosphate isomerase (EC 5.3.1.1) (TIM)|
           (Triose-phosphate isomerase)
          Length = 222

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +2

Query: 194 GSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHAAVAPPGS 367
           G+GQ AV +A+  + V  ++ S  ++A AP LP++    +  +LP+   H      GS
Sbjct: 16  GTGQGAVEIARACRAV--SEESGIEIAVAPQLPDIYRVASEVELPIFSQHMDGVGAGS 71

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>UBIE_TROWT (P67064) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 239

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYA----PALPNVRYAHTPADLPLEGIHAA 349
           DVG G+G +  ++A+    V G D S + L  A        N+ +  T  DLP       
Sbjct: 63  DVGAGTGASTRTVARTGAAVTGIDISPRMLQIARNRCKRFQNITWRLTNGDLPF------ 116

Query: 350 VAPPGSVDVVTVAQAFHWL-DLPRFYAQTRSLLRAHGVLAAWCYTEPRVGAAVDAVFWRL 526
             P  S D + +      + ++  F      +L+  G L    ++ PR      A F+RL
Sbjct: 117 --PDKSFDAILMVFCLRNVSNIQGFLCDAARVLKPGGRLVVCEFSHPR---RFVAPFYRL 171

Query: 527 Y 529
           Y
Sbjct: 172 Y 172

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>UBIE_TROW8 (P67065) Menaquinone biosynthesis methyltransferase ubiE (EC|
           2.1.1.-)
          Length = 239

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYA----PALPNVRYAHTPADLPLEGIHAA 349
           DVG G+G +  ++A+    V G D S + L  A        N+ +  T  DLP       
Sbjct: 63  DVGAGTGASTRTVARTGAAVTGIDISPRMLQIARNRCKRFQNITWRLTNGDLPF------ 116

Query: 350 VAPPGSVDVVTVAQAFHWL-DLPRFYAQTRSLLRAHGVLAAWCYTEPRVGAAVDAVFWRL 526
             P  S D + +      + ++  F      +L+  G L    ++ PR      A F+RL
Sbjct: 117 --PDKSFDAILMVFCLRNVSNIQGFLCDAARVLKPGGRLVVCEFSHPR---RFVAPFYRL 171

Query: 527 Y 529
           Y
Sbjct: 172 Y 172

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>Y829_SYNY3 (Q55423) Putative methyltransferase sll0829 (EC 2.1.1.-)|
          Length = 212

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 28/106 (26%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPA-LPNVRYAH---------------- 310
           D+  G GQA V LA+    VVG D S + L  A   +P   Y                  
Sbjct: 51  DLCCGGGQATVYLAQSGATVVGLDASPKALGRAKINVPQATYVQGLAEDLPFGEGEFDLV 110

Query: 311 ---------TPADLP--LEGIHAAVAPPGSVDVVTVAQAFHWLDLP 415
                    TPA L   + G+H  + P G   +V + +  +WL  P
Sbjct: 111 HTSVALHEMTPAQLQSIISGVHRVLKPGGIFALVDLHRPSNWLFWP 156

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>COQ3_SCHPO (O74421) Hexaprenyldihydroxybenzoate methyltransferase,|
           mitochondrial precursor (EC 2.1.1.114)
           (Dihydroxyhexaprenylbenzoate methyltransferase)
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) (DHHB-MT) (DHHB-MTas
          Length = 271

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
 Frame = +2

Query: 107 AARPDYPAELFQFIASKTARHDLAWDVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPA 286
           + R D+  E+F+     + +  L  D+G G G  + S+A+L   V   D S       P 
Sbjct: 60  STRLDFMTEVFRERNCFSGKKIL--DIGCGGGILSESMARLGASVTAVDAS-------PM 110

Query: 287 LPNVRYAHTPADLPLEG----IHAAVAP---PGSVDVVTVAQAFHWLDLPR 418
              V   H   D  L G    IH +V     P + DVVT  +    ++ PR
Sbjct: 111 AIEVAKKHASLDPVLNGRLEYIHGSVEGSQLPTTFDVVTCMEVLEHVEQPR 161

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>UBIG_BARQU (Q6G0I1) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 247

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLE---GIHAAV 352
           D+G G G     +A+L   VVG D +   +  A      +   T +DL ++    I  A+
Sbjct: 70  DIGCGGGLLCEPMARLGAMVVGVDAAQTNIEVA------KLHATQSDLSIDYRTTIAEAL 123

Query: 353 APPG-SVDVVTVAQAF-HWLDLPRFYAQTRSLLRAHGVL 463
           A  G   D++   +   H  D+  F A T  +L++ GV+
Sbjct: 124 ADKGEKFDIILNMEVVEHVADVNLFIAATAKMLKSQGVM 162

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>HEMK_MYCLE (P45832) Protein hemK homolog (EC 2.1.1.-) (M.MleHemKP)|
          Length = 288

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
 Frame = +2

Query: 113 RPDYPAELFQFIASKTARHDLAWDVGTGSGQAAVSLA--KLYKKVVGTDTSAQQLAYA-- 280
           RP+  A L   +A +     +  D  TGSG  AV+LA  +   +V+G D S   L YA  
Sbjct: 94  RPETEAILAWVMAQRLPERPVIVDACTGSGALAVALAHHRPAARVIGIDDSDSALDYARR 153

Query: 281 ----PALPNVRY-AHTPADLP-LEG-IHAAVAPPGSVDVVTVAQA 394
                A+  VR    TPA LP L+G +   VA P  V    V Q+
Sbjct: 154 NAEGTAVECVRADVTTPALLPELDGCVDLFVANPPYVPDDPVVQS 198

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>UBIG_BURPS (Q63RZ8) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 232

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHA---AV 352
           D+G G G  + S+A L  +V G D + + L  A    ++    +   +  E I A   A 
Sbjct: 53  DIGCGGGILSESMASLGAQVKGIDLATEALGVA----DLHSLESGVSVDYEAIAAEALAA 108

Query: 353 APPGSVDVVTVAQAFHWLDLP 415
             PG+ DVVT  +    +  P
Sbjct: 109 REPGAYDVVTCMEMLEHVPSP 129

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>UBIG_BURMA (Q62M18) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 232

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHA---AV 352
           D+G G G  + S+A L  +V G D + + L  A    ++    +   +  E I A   A 
Sbjct: 53  DIGCGGGILSESMASLGAQVKGIDLATEALGVA----DLHSLESGVSVDYEAIAAEALAA 108

Query: 353 APPGSVDVVTVAQAFHWLDLP 415
             PG+ DVVT  +    +  P
Sbjct: 109 REPGAYDVVTCMEMLEHVPSP 129

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>PRMA_THET8 (Q84BQ9) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 254

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +2

Query: 161 ARH----DLAWDVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPA 286
           ARH    D   D+GTGSG  A++  KL  K +G D     L  A A
Sbjct: 115 ARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA 160

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>FTSY_HAEIN (P44870) Cell division protein ftsY homolog|
          Length = 414

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 155 KTARHDLAWDVGTGSGQAAVSLAKLYKKVVG 247
           +TA H++   +  G+GQ A+S AKL+ + VG
Sbjct: 325 ETAPHEIMLTLDAGTGQNAISQAKLFNEAVG 355

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>Y092_MYCBO (P65347) Putative methyltransferase Mb0092 (EC 2.1.1.-)|
          Length = 197

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 29/103 (28%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHAAVAPP 361
           DVG G G  A  LA+    V   D  A  L  A      R+A+ P       I  A  P 
Sbjct: 28  DVGCGDGLLAARLARRIPYVTAVDIDAPVLRRA----QTRFANAPIRWLHADIMTAELPN 83

Query: 362 GSVDVVTVAQAFHWL-DLPRFYAQTRSLLRAHGVLAAWCYTEP 487
              D V    A H + D     ++   L+   G LA   +  P
Sbjct: 84  AGFDAVVSNAALHHIEDTRTALSRLGGLVTPGGTLAVVTFVTP 126

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>Y089_MYCTU (P65346) Putative methyltransferase Rv0089/MT0098 (EC 2.1.1.-)|
          Length = 197

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 29/103 (28%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHAAVAPP 361
           DVG G G  A  LA+    V   D  A  L  A      R+A+ P       I  A  P 
Sbjct: 28  DVGCGDGLLAARLARRIPYVTAVDIDAPVLRRA----QTRFANAPIRWLHADIMTAELPN 83

Query: 362 GSVDVVTVAQAFHWL-DLPRFYAQTRSLLRAHGVLAAWCYTEP 487
              D V    A H + D     ++   L+   G LA   +  P
Sbjct: 84  AGFDAVVSNAALHHIEDTRTALSRLGGLVTPGGTLAVVTFVTP 126

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>IGHA2_HUMAN (P01877) Ig alpha-2 chain C region|
          Length = 340

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 405 SQWNACATVTTSTEPGGATAAWMPSSGRSA 316
           S+ N   T+T   +  GAT  W PSSG+SA
Sbjct: 128 SEANLTCTLTGLRDASGATFTWTPSSGKSA 157

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>HEMK_MYCTU (Q10602) Protein hemK homolog (EC 2.1.1.-) (M.MtuHHemKP)|
          Length = 304

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
 Frame = +2

Query: 113 RPDYPAELFQFIASKTARHDLAWDVGTGSGQAAVSLAK------LYKKVVGTDTSAQQLA 274
           RP+  A L    A       L  D  TGSG  AV+LA+      L  +++G D S   L 
Sbjct: 92  RPETEAILAWATAQSLPARPLIVDACTGSGALAVALAQHRANLGLKARIIGIDDSDCALD 151

Query: 275 YAPALPNVRYAHTPADLPLEGIHAAVAPP 361
           YA            A  P+E + A V  P
Sbjct: 152 YA--------RRNAAGTPVELVRADVTTP 172

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>SALL1_HUMAN (Q9NSC2) Sal-like protein 1 (Zinc finger protein SALL1) (Spalt-like|
           transcription factor 1) (HSal1)
          Length = 1324

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 233 KKVVGTDTSAQQLAYAPALPN-VRYAHTPADLPLEGIHAAVAPPGSV 370
           K V+ T T++  L   P+LP+ + +  T    P+   H+A +PPGSV
Sbjct: 545 KPVLPTLTTSVGLPLPPSLPSLIPFIKTEEPAPIPISHSATSPPGSV 591

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>Y912_HAEIN (P44074) Hypothetical protein HI0912|
          Length = 254

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
 Frame = +2

Query: 182 DVGTGSG-QAAVSLAKLYKKVVGTDTSAQQLAYAPA----LPNVRYAHTPADLPLEGIHA 346
           D+G G+G    + L +   KV+GTD S + L  A              +   LP+E +  
Sbjct: 50  DLGCGTGGHLQLYLERGAAKVIGTDLSEKMLEQAEKDLQKCGQFSGRFSLYHLPIEKL-- 107

Query: 347 AVAPPGSVDVVTVAQAFHWLD-LPRFYAQTRSLLRAHGVL 463
           A  P    DV+T + AFH+++  P   +     L ++G L
Sbjct: 108 AELPESHFDVITSSFAFHYIENFPTLLSTIHDKLSSNGTL 147

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>TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit TIM50-C,|
           mitochondrial precursor
          Length = 428

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 494 GAAVDAVFWRLYNGSQPHWAPNRKMVDDEY 583
           G+AV A FW +Y   +P   PN + ++DE+
Sbjct: 154 GSAVAAGFWAVYEFGKPEVDPNGQPIEDEF 183

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>UBIG_BRUSU (Q8FYK0) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 248

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHA-AVAP 358
           D+G G G     +A+L   V+G D SA  +  A     +  A +  D+      A A+A 
Sbjct: 70  DIGCGGGLLCEPMARLGATVIGADASATNIEVA----KIHAAQSSLDIDYRATTAEALAD 125

Query: 359 PG-SVDVVTVAQAF-HWLDLPRFYAQTRSLLRAHGVL 463
            G   DVV   +   H  D+  F + T ++++  G++
Sbjct: 126 AGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLM 162

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>GLMM_VIBPA (Q87LZ7) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 446

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +2

Query: 146 IASKTARHDLAWDVGTGSGQAAVSLAKLYKKVVGTDTSAQQLA-----YAPALPNVRYAH 310
           I ++ + H +  D  T +G A V+  ++   VVG+D S   L+     Y   L NVR+A 
Sbjct: 323 IGAENSGHVILLDKVT-TGDAIVAALQVLASVVGSDMSLHDLSQGMTLYPQVLENVRFAG 381

Query: 311 TPADLPLEGIHAAV 352
               L  + + AAV
Sbjct: 382 ENNPLEAQAVLAAV 395

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>UBIG_BRAJA (Q89XU2) 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)|
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase)
          Length = 253

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHAAVAPP 361
           D+G G+G     L++L  +V+G D S   +A A    +   +H   D     +   + P 
Sbjct: 76  DIGCGAGLLCEPLSRLGAQVIGVDPSQSNIAAAKL--HADKSHLAIDYRCTTVE-EIDPR 132

Query: 362 GSVDVVTVAQAF-HWLDLPRFYAQTRSLLRAHGVL 463
              D+V   +   H +D+  F  +  ++L+ +G++
Sbjct: 133 ERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLM 167

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>PRMA_BACHD (Q9KD70) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 313

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +2

Query: 182 DVGTGSGQAAVSLAKL-YKKVVGTDTSAQQLAYAPALPNVRYAHTPADLPLEGIHAAVAP 358
           DVGTGSG  +++ AKL   +V+G D    ++A   A  NV+       + +   H     
Sbjct: 180 DVGTGSGVLSIAAAKLGASEVLGLD--LDEVAVKSAQMNVKLNKVHRQVMVRQNHLLEGI 237

Query: 359 PGSVDVVTVAQAFHWLDLPRFYAQTRSLLRAHG 457
            G+ DV+ VA     + + RF A  +++L+  G
Sbjct: 238 TGTRDVI-VANILAEV-IIRFVADAKAVLKPGG 268

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>NFRA_ECOLI (P31600) Bacteriophage N4 adsorption protein A precursor|
          Length = 990

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 408 SSQWNACATVTTSTEPGGATAAWMPSSGRSAGVWAYRTL 292
           ++ WN  A     T PG A  AW+ +  R    W +R +
Sbjct: 480 AAAWNRLAKCYRDTLPGVALYAWLQAEQRQPSAWQHRAV 518

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>MLTB_ECOLI (P41052) Membrane-bound lytic murein transglycosylase B precursor|
           (EC 3.2.1.-) (Murein hydrolase B) (35 kDa soluble lytic
           transglycosylase) (Slt35)
          Length = 361

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
 Frame = +2

Query: 167 HDLAWDVGTGSGQAAVSLAKLYKKVVGTDTSAQQLAYAPALPN-VRYAHTPADLPLEGIH 343
           H   WD     G  A +  K +  V G   +      AP LPN  +  ++ + L   G+ 
Sbjct: 243 HINLWDPVDAIGSVA-NYFKAHGWVKGDQVAVMANGQAPGLPNGFKTKYSISQLAAAGL- 300

Query: 344 AAVAPPGS--------VDVVTVAQAFHWLDLPRFYAQTRSLLRAHGVLAAW 472
               P G+        +DV T  Q  +W  LP FY  TR     H  +A W
Sbjct: 301 TPQQPLGNHQQASLLRLDVGTGYQ--YWYGLPNFYTITRYNHSTHYAMAVW 349

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>MOXR_PARDE (P29901) Protein moxR|
          Length = 339

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
 Frame = +2

Query: 317 ADLPLEGIHAA------VAPPGSVDVVTVAQAFHWLD-----LPRFYAQTRSLLRAHGVL 463
           A L LEG  AA      V+P G   +V  A+A  WL+     LP+      + + AH + 
Sbjct: 251 AGLALEGADAARLIRGGVSPRGMQHLVRAARACAWLEGREAVLPQDVRAVLAPVMAHRIF 310

Query: 464 AAWCYTEPR----VGAAVDAVF 517
            +  Y EPR    V A +DA F
Sbjct: 311 LSPAY-EPRREALVPALIDAAF 331

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>GLMM_VIBCH (Q9KU84) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 446

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = +2

Query: 146 IASKTARHDLAWDVGTGSGQAAVSLAKLYKKVVGTDTSAQQLA-----YAPALPNVRYAH 310
           I ++ + H +  D  T +G A V+  ++   VVG++ +  +LA     Y   L NVR+A 
Sbjct: 323 IGAENSGHVILLDKVT-TGDAIVAGLQVLASVVGSEMTLHELAKGMTLYPQVLENVRFAG 381

Query: 311 TPADLPLEGIHAAVA 355
               L  + + AAV+
Sbjct: 382 DNNPLEADAVKAAVS 396

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>PRMA_GEOSL (Q74G05) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 299

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 164 RHDLAWDVGTGSGQAAVSLAKL-YKKVVGTD 253
           R D   DVGTGSG  A++  +L  ++V+GTD
Sbjct: 164 RPDRVLDVGTGSGILAIAAVRLGARQVIGTD 194

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>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3) (RCK beta3)
          Length = 404

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = -1

Query: 363 PGGATAAWMPSSGRSAGVWAYRTLGRAGA*ASCCALVSVPTTFLYSFASETAAWPLPVPT 184
           P     A   S+GR  G+  YR LG++G   SC  L     TF    + ETA   L V  
Sbjct: 61  PPAPAGALRESTGRGTGM-KYRNLGKSGLRVSCLGL-GTWVTFGSQISDETAEDLLTVAY 118

Query: 183 SH 178
            H
Sbjct: 119 EH 120

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>IGHA1_HUMAN (P01876) Ig alpha-1 chain C region|
          Length = 353

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 405 SQWNACATVTTSTEPGGATAAWMPSSGRSA 316
           S+ N   T+T   +  G T  W PSSG+SA
Sbjct: 141 SEANLTCTLTGLRDASGVTFTWTPSSGKSA 170

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>IGHA1_GORGO (P20758) Ig alpha-1 chain C region|
          Length = 353

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 405 SQWNACATVTTSTEPGGATAAWMPSSGRSA 316
           S+ N   T+T   +  G T  W PSSG+SA
Sbjct: 141 SEANLTCTLTGLRDASGVTFTWTPSSGKSA 170


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,028,006
Number of Sequences: 219361
Number of extensions: 1042792
Number of successful extensions: 3765
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3759
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result