>RAG2_ONCMY (Q91193) V(D)J recombination-activating protein 2 (RAG-2)|
          Length = 533

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -1

Query: 596 GRRAYGEESAHERVHGLGQRGAAEAADAECQERELVREAPPPR 468
           GR    E S+   +  L  RG        CQERELV E P PR
Sbjct: 95  GRTPNNEISSSLYLLTLDSRGCNRKVTLRCQERELVGEQPGPR 137

>VG42_BPMU (Q9T1V6) Protein gp42|
          Length = 690

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 170 GVGSIHPSIWPRDVSDLPAGGGKRSEVGRRLGRISPLV 283
           G+  +    WPR   D  +GGG+R   G   GR++PL+
Sbjct: 416 GIQRVFVINWPRGFGDYGSGGGRRVRSG---GRMAPLL 450


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,429,702
Number of Sequences: 219361
Number of extensions: 1329676
Number of successful extensions: 3368
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3366
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)