ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome... 184 2e-43
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 184 2e-43
4ref|XM_466267.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
6dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
7gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 44 0.44
8ref|XM_852171.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.44
9ref|XM_843737.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.44
10gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of... 44 0.44
11tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) g... 44 0.44
12dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate... 44 0.44
13dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.44
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.44
15dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hyp... 44 0.44
16gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.44
17emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chr... 44 0.44
18ref|XM_366139.1| Magnaporthe grisea 70-15 chromosome IV hypothet... 42 1.7
19gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.7
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.7
21gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 42 1.7
22gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complet... 42 1.7
23emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.7
24emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 1.7
25emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 42 1.7
26emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
27emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.7
28emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 42 1.7
29emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.7
30gb|AY528597.1| Burkholderia pseudomallei clone 167 unknown sequence 42 1.7
31gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.7
32gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 42 1.7
33gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.7
34gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.7
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
37dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
38dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
39dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
40dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
41dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
42dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
43gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol ph... 42 1.7
44dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.7
45dbj|D10358.1|KPNFOLA K. aerogenes folA and apaH genes 42 1.7
46ref|XM_480271.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
47ref|XM_467432.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
48ref|NM_195889.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.8
49ref|XM_473255.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
50gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 6.8
51gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
52gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosom... 40 6.8
53ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain r... 40 6.8
54gb|DQ157861.1| Corynebacterium ammoniagenes putative membrane pr... 40 6.8
55ref|XM_849537.1| PREDICTED: Canis familiaris similar to Tetraspa... 40 6.8
56gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.8
57emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.8
58emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.8
59gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.8
60emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.8
61emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 6.8
62dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.8
63gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of ... 40 6.8
64ref|NM_000297.2| Homo sapiens polycystic kidney disease 2 (autos... 40 6.8
65gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.8
66gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.8
67gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.8
68gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4,... 40 6.8
69dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
70dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
71dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
72dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
73dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
74gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced prot... 40 6.8
75dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
76dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
77dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
78dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.8
79gb|AF004859.1|HSPKD01 Homo sapiens autosomal dominant polycystic... 40 6.8
80dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.8
81dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
82gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 1... 40 6.8
83dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 6.8
84dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 6.8
85dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcripti... 40 6.8
86dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcripti... 40 6.8
87dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
88gb|BC112261.1| Homo sapiens polycystic kidney disease 2 (autosom... 40 6.8
89gb|BC112263.1| Homo sapiens polycystic kidney disease 2 (autosom... 40 6.8
90dbj|AK070234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
91dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
92gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cyt... 40 6.8
93gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.8
94gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.8
95gb|U50928.1|HSU50928 Human autosomal dominant polycystic kidney ... 40 6.8
96gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
97emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
98emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on ch... 40 6.8
99dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptiona... 40 6.8 
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  184 bits (93), Expect = 2e-43
 Identities = 153/173 (88%)
 Strand = Plus / Plus

                                                                         
Query: 149   cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 208
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 18340

                                                                         
Query: 209   ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 268
             ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 18341 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 18400

                                                                  
Query: 269   gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 321
              | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 18401 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 18453



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Plus

                                                                         
Query: 378   ccccggcgtacggcgtggccgtgtacaacgtcaccaccggggagtggcaccgcgagagct 437
             ||||||||||||| ||||| ||||||||||| || || |||||||||   || ||||   
Sbjct: 18537 ccccggcgtacggggtggcggtgtacaacgtgacgacgggggagtggaggcgggagaagg 18596

                                                                 
Query: 438   cggccccgccggtgccgatgttcgcccagtgcgcggccgtgggcacccgcct 489
             |||| ||||||||||| |||||||| |||||||| || ||||| || |||||
Sbjct: 18597 cggcgccgccggtgcccatgttcgcgcagtgcgccgcggtggggacgcgcct 18648
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  184 bits (93), Expect = 2e-43
 Identities = 153/173 (88%)
 Strand = Plus / Minus

                                                                           
Query: 149     cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 208
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798674 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7798615

                                                                           
Query: 209     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 268
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 7798614 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 7798555

                                                                    
Query: 269     gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 321
                | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 7798554 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 7798502



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                           
Query: 378     ccccggcgtacggcgtggccgtgtacaacgtcaccaccggggagtggcaccgcgagagct 437
               ||||||||||||| ||||| ||||||||||| || || |||||||||   || ||||   
Sbjct: 7798418 ccccggcgtacggggtggcggtgtacaacgtgacgacgggggagtggaggcgggagaagg 7798359

                                                                   
Query: 438     cggccccgccggtgccgatgttcgcccagtgcgcggccgtgggcacccgcct 489
               |||| ||||||||||| |||||||| |||||||| || ||||| || |||||
Sbjct: 7798358 cggcgccgccggtgcccatgttcgcgcagtgcgccgcggtggggacgcgcct 7798307
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  184 bits (93), Expect = 2e-43
 Identities = 153/173 (88%)
 Strand = Plus / Minus

                                                                           
Query: 149     cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 208
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7868761 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7868702

                                                                           
Query: 209     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 268
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 7868701 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 7868642

                                                                    
Query: 269     gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 321
                | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 7868641 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 7868589



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                           
Query: 378     ccccggcgtacggcgtggccgtgtacaacgtcaccaccggggagtggcaccgcgagagct 437
               ||||||||||||| ||||| ||||||||||| || || |||||||||   || ||||   
Sbjct: 7868505 ccccggcgtacggggtggcggtgtacaacgtgacgacgggggagtggaggcgggagaagg 7868446

                                                                   
Query: 438     cggccccgccggtgccgatgttcgcccagtgcgcggccgtgggcacccgcct 489
               |||| ||||||||||| |||||||| |||||||| || ||||| || |||||
Sbjct: 7868445 cggcgccgccggtgcccatgttcgcgcagtgcgccgcggtggggacgcgcct 7868394
to top
>ref|XM_466267.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 158 ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 217
           |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 70  ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 129

                                                 
Query: 218 tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 255
           ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 130 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 167
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                            
Query: 158      ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 217
                |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 21385077 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 21385136

                                                      
Query: 218      tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 255
                ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 21385137 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 21385174



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      tggcgcgcgccgaggccggc 304
                ||||||||||||||||||||
Sbjct: 29483459 tggcgcgcgccgaggccggc 29483440
to top
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                         
Query: 158   ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 217
             |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 45030 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 45089

                                                   
Query: 218   tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 255
             ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 45090 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 45127
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 292     cgccgaggccggcgccaacgaggatc 317
               |||||||| |||||||||||||||||
Sbjct: 4281763 cgccgaggacggcgccaacgaggatc 4281788
to top
>ref|XM_852171.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 4 (LOC476516), mRNA
          Length = 1957

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 253 gcggagcgccgccgccgccccg 274
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
to top
>ref|XM_843737.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 3 (LOC476516), mRNA
          Length = 2110

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 253 gcggagcgccgccgccgccccg 274
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
to top
>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome
          Length = 12079

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 337  cggcaacccggtggccggcgacgacgcggc 366
            |||| |||| ||||||||||||||||||||
Sbjct: 3354 cggcgaccccgtggccggcgacgacgcggc 3325
to top
>tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) gene, complete cds
          Length = 53301

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 80    cagcaaagctcacacaagtcacaagc 105
             |||| |||||||||||||||||||||
Sbjct: 25446 cagccaagctcacacaagtcacaagc 25471
to top
>dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate oxidase, exon 1-3,
            complete cds
          Length = 1783

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 285  tggcgcgcgccgaggccggcgc 306
            ||||||||||||||||||||||
Sbjct: 1120 tggcgcgcgccgaggccggcgc 1099
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 335     ttcggcaacccggtggccggcg 356
               ||||||||||||||||||||||
Sbjct: 1606464 ttcggcaacccggtggccggcg 1606443



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 261     ccgccgccgccccggagttc 280
               ||||||||||||||||||||
Sbjct: 4061183 ccgccgccgccccggagttc 4061164
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 343     cccggtggccggcgacgacgcg 364
               ||||||||||||||||||||||
Sbjct: 2281355 cccggtggccggcgacgacgcg 2281376



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     cgccctggcgcgcgccgagg 299
               ||||||||||||||||||||
Sbjct: 3071963 cgccctggcgcgcgccgagg 3071982



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 336    tcggcaacccggtggccggcgacg 359
              ||||| ||||||||||||||||||
Sbjct: 310706 tcggccacccggtggccggcgacg 310729
to top
>dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hypothetical protein,
             complete and partial cds
          Length = 72195

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 80    cagcaaagctcacacaagtcacaagc 105
             |||| |||||||||||||||||||||
Sbjct: 54762 cagccaagctcacacaagtcacaagc 54787
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 290     cgcgccgaggccggcgccaacgagga 315
               |||||||||||||||||| |||||||
Sbjct: 2631514 cgcgccgaggccggcgccgacgagga 2631489
to top
>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete
              sequence
          Length = 210982

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 80     cagcaaagctcacacaagtcacaagc 105
              |||| |||||||||||||||||||||
Sbjct: 132668 cagccaagctcacacaagtcacaagc 132693
to top
>ref|XM_366139.1| Magnaporthe grisea 70-15 chromosome IV hypothetical protein
            (MG10359.4) partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 284  ctggcgcgcgccgaggccggc 304
            |||||||||||||||||||||
Sbjct: 1036 ctggcgcgcgccgaggccggc 1056
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 286     ggcgcgcgccgaggccggcgc 306
               |||||||||||||||||||||
Sbjct: 3181412 ggcgcgcgccgaggccggcgc 3181432
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      accgctcgatgcgccgcgtgt 242
                |||||||||||||||||||||
Sbjct: 10557369 accgctcgatgcgccgcgtgt 10557349
to top
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 283   cctggcgcgcgccgaggccgg 303
             |||||||||||||||||||||
Sbjct: 82002 cctggcgcgcgccgaggccgg 81982
to top
>gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complete genome
          Length = 37639

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 283  cctggcgcgcgccgaggccggcgcc 307
            ||||||||||||||||| |||||||
Sbjct: 6106 cctggcgcgcgccgaggtcggcgcc 6130
to top
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 348   tggccggcgacgacgcggcgc 368
             |||||||||||||||||||||
Sbjct: 55398 tggccggcgacgacgcggcgc 55418
to top
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 348    tggccggcgacgacgcggcgc 368
              |||||||||||||||||||||
Sbjct: 312081 tggccggcgacgacgcggcgc 312101
to top
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 348    tggccggcgacgacgcggcgc 368
              |||||||||||||||||||||
Sbjct: 190070 tggccggcgacgacgcggcgc 190050
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 286     ggcgcgcgccgaggccggcgc 306
               |||||||||||||||||||||
Sbjct: 1358844 ggcgcgcgccgaggccggcgc 1358864
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 283    cctggcgcgcgccgaggccggcgcc 307
              ||||||||||||||||| |||||||
Sbjct: 148671 cctggcgcgcgccgaggtcggcgcc 148695
to top
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 343    cccggtggccggcgacgacgcggcg 367
              |||||||||||||||||||| ||||
Sbjct: 270247 cccggtggccggcgacgacgaggcg 270271
to top
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 289   gcgcgccgaggccggcgccaa 309
             |||||||||||||||||||||
Sbjct: 89136 gcgcgccgaggccggcgccaa 89116
to top
>gb|AY528597.1| Burkholderia pseudomallei clone 167 unknown sequence
          Length = 246

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 283 cctggcgcgcgccgaggccggcgcc 307
           ||||||||||||||||| |||||||
Sbjct: 109 cctggcgcgcgccgaggtcggcgcc 85
to top
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 222    accgctcgatgcgccgcgtgt 242
              |||||||||||||||||||||
Sbjct: 113182 accgctcgatgcgccgcgtgt 113162
to top
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     ctcccacggacggagagcgcc 67
              |||||||||||||||||||||
Sbjct: 597042 ctcccacggacggagagcgcc 597022
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 288     cgcgcgccgaggccggcgcca 308
               |||||||||||||||||||||
Sbjct: 1413119 cgcgcgccgaggccggcgcca 1413099



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     ggccggcgacgacgcggcgc 368
               ||||||||||||||||||||
Sbjct: 2131561 ggccggcgacgacgcggcgc 2131580
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 286     ggcgcgcgccgaggccggcgc 306
               |||||||||||||||||||||
Sbjct: 1274325 ggcgcgcgccgaggccggcgc 1274305
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 259      cgccgccgccgccccggagttcgcc 283
                |||||||||||| ||||||||||||
Sbjct: 27926370 cgccgccgccgcgccggagttcgcc 27926394
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 222      accgctcgatgcgccgcgtgt 242
                |||||||||||||||||||||
Sbjct: 10555470 accgctcgatgcgccgcgtgt 10555450
to top
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 259   cgccgccgccgccccggagttcgcc 283
             |||||||||||| ||||||||||||
Sbjct: 89728 cgccgccgccgcgccggagttcgcc 89752
to top
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 259   cgccgccgccgccccggagttcgcc 283
             |||||||||||| ||||||||||||
Sbjct: 15704 cgccgccgccgcgccggagttcgcc 15728
to top
>dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H10, full
            insert sequence
          Length = 1850

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 222  accgctcgatgcgccgcgtgt 242
            |||||||||||||||||||||
Sbjct: 1226 accgctcgatgcgccgcgtgt 1206
to top
>dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D07, full
            insert sequence
          Length = 2009

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 222  accgctcgatgcgccgcgtgt 242
            |||||||||||||||||||||
Sbjct: 1397 accgctcgatgcgccgcgtgt 1377
to top
>dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-E06, full
           insert sequence
          Length = 811

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 259 cgccgccgccgccccggagttcgcc 283
           |||||||||||| ||||||||||||
Sbjct: 55  cgccgccgccgcgccggagttcgcc 79
to top
>dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G08, full
           insert sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 accgctcgatgcgccgcgtgt 242
           |||||||||||||||||||||
Sbjct: 248 accgctcgatgcgccgcgtgt 228
to top
>gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol phosphate synthase (trpC),
           tryptophan synthase beta subunit (trpB), and tryptophan
           synthase alpha subunit (trpA) genes, complete cds; and
           unknown gene
          Length = 5093

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 gcgcgccgaggccggcgccaa 309
           |||||||||||||||||||||
Sbjct: 442 gcgcgccgaggccggcgccaa 462
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 272   ccggagttcgccctggcgcgc 292
             |||||||||||||||||||||
Sbjct: 93998 ccggagttcgccctggcgcgc 93978
to top
>dbj|D10358.1|KPNFOLA K. aerogenes folA and apaH genes
          Length = 1654

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 365  gcgcccgaggacgccccggcg 385
            |||||||||||||||||||||
Sbjct: 1129 gcgcccgaggacgccccggcg 1109
to top
>ref|XM_480271.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 ggcggagcgccgccgccgcc 271
           ||||||||||||||||||||
Sbjct: 356 ggcggagcgccgccgccgcc 337
to top
>ref|XM_467432.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tggcgcgcgccgaggccggc 304
           ||||||||||||||||||||
Sbjct: 696 tggcgcgcgccgaggccggc 715
to top
>ref|NM_195889.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0052C09.12), mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 cgccgaggccggcgccaacg 311
           ||||||||||||||||||||
Sbjct: 510 cgccgaggccggcgccaacg 529
to top
>ref|XM_473255.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gagcgccgccgccgccccgg 275
           ||||||||||||||||||||
Sbjct: 120 gagcgccgccgccgccccgg 101
to top
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 248    ggctggcggagcgccgccgccgcc 271
              ||||||||||||| ||||||||||
Sbjct: 105617 ggctggcggagcgacgccgccgcc 105640
to top
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0052C09, complete sequence
          Length = 139468

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   cgccgaggccggcgccaacg 311
             ||||||||||||||||||||
Sbjct: 97540 cgccgaggccggcgccaacg 97559
to top
>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ctggtcttcctcatgcagtt 336
              ||||||||||||||||||||
Sbjct: 131615 ctggtcttcctcatgcagtt 131634
to top
>ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain receptor protein
           SORCS 3 (LOC533349), mRNA
          Length = 1661

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 307 caacgaggatctggtcttcc 326
           ||||||||||||||||||||
Sbjct: 679 caacgaggatctggtcttcc 660
to top
>gb|DQ157861.1| Corynebacterium ammoniagenes putative membrane protein gene, complete
            cds; and RNA polymerase beta, beta' operon, partial
            sequence
          Length = 9851

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 447  cggtgccgatgttcgcccag 466
            ||||||||||||||||||||
Sbjct: 3799 cggtgccgatgttcgcccag 3818
to top
>ref|XM_849537.1| PREDICTED: Canis familiaris similar to Tetraspanin-9 (Tspan-9)
           (Tetraspan NET-5) (LOC612996), mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 cgcgccgaggccggcgccaa 309
           ||||||||||||||||||||
Sbjct: 160 cgcgccgaggccggcgccaa 179
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     cgcgccgaggccggcgccaa 309
               ||||||||||||||||||||
Sbjct: 1848628 cgcgccgaggccggcgccaa 1848647
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 344     ccggtggccggcgacgacgc 363
               ||||||||||||||||||||
Sbjct: 3752895 ccggtggccggcgacgacgc 3752876
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 391     cgtggccgtgtacaacgtca 410
               ||||||||||||||||||||
Sbjct: 1500754 cgtggccgtgtacaacgtca 1500773
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     ggccggcgacgacgcggcgc 368
               ||||||||||||||||||||
Sbjct: 4476942 ggccggcgacgacgcggcgc 4476961
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 349     ggccggcgacgacgcggcgc 368
               ||||||||||||||||||||
Sbjct: 1209154 ggccggcgacgacgcggcgc 1209173
to top
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    ggcgcgcgccgaggccggcg 305
              ||||||||||||||||||||
Sbjct: 248502 ggcgcgcgccgaggccggcg 248483
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     acccggtggccggcgacgac 361
               ||||||||||||||||||||
Sbjct: 3307324 acccggtggccggcgacgac 3307305



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     ccggtggccggcgacgacgc 363
               ||||||||||||||||||||
Sbjct: 1696168 ccggtggccggcgacgacgc 1696187
to top
>gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of the complete genome
          Length = 12357

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  cgccgaggccggcgccaacg 311
            ||||||||||||||||||||
Sbjct: 3296 cgccgaggccggcgccaacg 3277
to top
>ref|NM_000297.2| Homo sapiens polycystic kidney disease 2 (autosomal dominant)
           (PKD2), mRNA
          Length = 5073

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 467 tgcgcggccgtgggcacccgcctcgccg 494
           ||||||||||||||| || |||||||||
Sbjct: 163 tgcgcggccgtgggcgccagcctcgccg 190
to top
>gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306,  section 337 of 469 of the
            complete genome
          Length = 11092

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  ccggtggccggcgacgacgc 363
            ||||||||||||||||||||
Sbjct: 7727 ccggtggccggcgacgacgc 7708
to top
>gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 395
            of 460 of the complete genome
          Length = 10967

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  cgccgccccggagttcgccc 284
            ||||||||||||||||||||
Sbjct: 7719 cgccgccccggagttcgccc 7700
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     cgccgccccggagttcgccc 284
               ||||||||||||||||||||
Sbjct: 4425323 cgccgccccggagttcgccc 4425304
to top
>gb|AC084732.1|AC084732 Homo sapiens BAC clone RP11-368G2 from 4, complete sequence
          Length = 181576

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 467    tgcgcggccgtgggcacccgcctcgccg 494
              ||||||||||||||| || |||||||||
Sbjct: 171145 tgcgcggccgtgggcgccagcctcgccg 171118
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 256      gagcgccgccgccgccccgg 275
                ||||||||||||||||||||
Sbjct: 26369656 gagcgccgccgccgccccgg 26369637
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     cgccgaggccggcgccaacg 311
               ||||||||||||||||||||
Sbjct: 9745015 cgccgaggccggcgccaacg 9745034
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 352      cggcgacgacgcggcgcccg 371
                ||||||||||||||||||||
Sbjct: 13705204 cggcgacgacgcggcgcccg 13705185
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     ggcggagcgccgccgccgcc 271
               ||||||||||||||||||||
Sbjct: 4005382 ggcggagcgccgccgccgcc 4005363
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 344     ccggtggccggcgacgacgcggcg 367
               |||||||||||||||| |||||||
Sbjct: 7261928 ccggtggccggcgacgccgcggcg 7261951
to top
>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 ccgacgacgtcgccgtcgac 193
           ||||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcgac 564
to top
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   ccggtggccggcgacgacgcggcg 367
             |||||||||||||||| |||||||
Sbjct: 63358 ccggtggccggcgacgccgcggcg 63381
to top
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   tggcgcgcgccgaggccggc 304
             ||||||||||||||||||||
Sbjct: 78489 tggcgcgcgccgaggccggc 78470
to top
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1311_H06
          Length = 139868

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    tggcgcgcgccgaggccggc 304
              ||||||||||||||||||||
Sbjct: 134331 tggcgcgcgccgaggccggc 134312
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 168     ggatgcccgacgacgtcgcc 187
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395
to top
>gb|AF004859.1|HSPKD01 Homo sapiens autosomal dominant polycystic kidney disease type II
           protein (PKD2) gene, exon 1
          Length = 722

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 467 tgcgcggccgtgggcacccgcctcgccg 494
           ||||||||||||||| || |||||||||
Sbjct: 163 tgcgcggccgtgggcgccagcctcgccg 190
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 346     ggtggccggcgacgacgcgg 365
               ||||||||||||||||||||
Sbjct: 4812961 ggtggccggcgacgacgcgg 4812980
to top
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    cggcgacgacgcggcgcccg 371
              ||||||||||||||||||||
Sbjct: 103318 cggcgacgacgcggcgcccg 103299
to top
>gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 17 of 32 of the
            complete genome
          Length = 10091

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  cggctggcggagcgccgccg 266
            ||||||||||||||||||||
Sbjct: 4952 cggctggcggagcgccgccg 4933
to top
>dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
             seed, ivory seed-variegation (ivs-v) mutant alele
          Length = 13370

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   ctggcggagcgccgccgccg 269
             ||||||||||||||||||||
Sbjct: 10337 ctggcggagcgccgccgccg 10356
to top
>dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
            seed, complete cds
          Length = 10104

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  ctggcggagcgccgccgccg 269
            ||||||||||||||||||||
Sbjct: 7072 ctggcggagcgccgccgccg 7091
to top
>dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2387

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  ctggcggagcgccgccgccg 269
            ||||||||||||||||||||
Sbjct: 1609 ctggcggagcgccgccgccg 1628
to top
>dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2314

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  ctggcggagcgccgccgccg 269
            ||||||||||||||||||||
Sbjct: 1567 ctggcggagcgccgccgccg 1586
to top
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0462E11
          Length = 166115

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   ggcggagcgccgccgccgcc 271
             ||||||||||||||||||||
Sbjct: 92679 ggcggagcgccgccgccgcc 92660
to top
>gb|BC112261.1| Homo sapiens polycystic kidney disease 2 (autosomal dominant), mRNA
           (cDNA clone MGC:138466 IMAGE:8327729), complete cds
          Length = 3054

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 467 tgcgcggccgtgggcacccgcctcgccg 494
           ||||||||||||||| || |||||||||
Sbjct: 184 tgcgcggccgtgggcgccagcctcgccg 211
to top
>gb|BC112263.1| Homo sapiens polycystic kidney disease 2 (autosomal dominant), mRNA
           (cDNA clone MGC:138468 IMAGE:8327731), complete cds
          Length = 3054

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 467 tgcgcggccgtgggcacccgcctcgccg 494
           ||||||||||||||| || |||||||||
Sbjct: 184 tgcgcggccgtgggcgccagcctcgccg 211
to top
>dbj|AK070234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K18, full
           insert sequence
          Length = 1816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tggcgcgcgccgaggccggc 304
           ||||||||||||||||||||
Sbjct: 697 tggcgcgcgccgaggccggc 716
to top
>dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P15, full
           insert sequence
          Length = 2455

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gagcgccgccgccgccccgg 275
           ||||||||||||||||||||
Sbjct: 304 gagcgccgccgccgccccgg 285
to top
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4,
             cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS
             (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO
             (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK
             (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG
             (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC
             (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB
             (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF
             (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ
             (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN
             (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ),
             MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV
             (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY
             (mmcY) genes, complete cds; and unknown genes
          Length = 63734

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gacgcggcgcccgaggacgc 378
             ||||||||||||||||||||
Sbjct: 17233 gacgcggcgcccgaggacgc 17214
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     acccggtggccggcgacgac 361
               ||||||||||||||||||||
Sbjct: 3303472 acccggtggccggcgacgac 3303453



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     ccggtggccggcgacgacgc 363
               ||||||||||||||||||||
Sbjct: 1719728 ccggtggccggcgacgacgc 1719747
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     cctggcgcgcgccgaggccg 302
               ||||||||||||||||||||
Sbjct: 1952428 cctggcgcgcgccgaggccg 1952409
to top
>gb|U50928.1|HSU50928 Human autosomal dominant polycystic kidney disease type II (PKD2)
           mRNA, complete cds
          Length = 5057

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 467 tgcgcggccgtgggcacccgcctcgccg 494
           ||||||||||||||| || |||||||||
Sbjct: 163 tgcgcggccgtgggcgccagcctcgccg 190
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     cgccgaggccggcgccaacg 311
               ||||||||||||||||||||
Sbjct: 9751054 cgccgaggccggcgccaacg 9751073
to top
>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
             complete sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   gagcgccgccgccgccccgg 275
             ||||||||||||||||||||
Sbjct: 10289 gagcgccgccgccgccccgg 10270
to top
>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
              sequence
          Length = 220149

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 317    ctggtcttcctcatgcagtt 336
              ||||||||||||||||||||
Sbjct: 106484 ctggtcttcctcatgcagtt 106503
to top
>dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptional factor, complete
            cds, strain:TKS
          Length = 2309

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  ctggcggagcgccgccgccg 269
            ||||||||||||||||||||
Sbjct: 1590 ctggcggagcgccgccgccg 1609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,936,314
Number of Sequences: 3902068
Number of extensions: 3936314
Number of successful extensions: 119835
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112837
Number of HSP's gapped (non-prelim): 6989
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top