ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart31g12 |
|---|---|
| Clone Library Name | barley_pub |
>PPM1F_HUMAN (P49593) Ca(2+)/calmodulin-dependent protein kinase phosphatase (EC| 3.1.3.16) (CaM-kinase phosphatase) (CaMKPase) (Partner of PIX 2) (hFEM-2) (Protein phosphatase 1F) Length = 454 Score = 43.1 bits (100), Expect = 6e-04 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +3 Query: 444 RRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 RR MED H+ + + G L P+ A++ VFDGHGG DAA Y Sbjct: 166 RRKMEDRHVSLPSFNQLFG--LSDPVNRAYFAVFDGHGGVDAARY 208
>PPM1F_MOUSE (Q8CGA0) Ca(2+)/calmodulin-dependent protein kinase phosphatase (EC| 3.1.3.16) (CaM-kinase phosphatase) (CaMKPase) (Protein phosphatase 1F) Length = 452 Score = 38.9 bits (89), Expect = 0.011 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = +3 Query: 444 RRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 RR MED H+ + + G L + A++ VFDGHGG DAA Y Sbjct: 163 RRKMEDRHVSLPAFNHLFG--LSDSVHRAYFAVFDGHGGVDAARY 205
>PPM1F_RAT (Q9WVR7) Ca(2+)/calmodulin-dependent protein kinase phosphatase (EC| 3.1.3.16) (CaM-kinase phosphatase) (CaMKPase) (Partner of PIX 2) (Protein phosphatase 1F) Length = 450 Score = 38.9 bits (89), Expect = 0.011 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = +3 Query: 444 RRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 RR MED H+ + + G L + A++ VFDGHGG DAA Y Sbjct: 162 RRKMEDRHVSLPAFNHLFG--LSDSVHRAYFAVFDGHGGVDAARY 204
>PP2CL_MOUSE (Q8BHN0) Protein phosphatase 2C isoform epsilon (EC 3.1.3.16)| (PP2C-epsilon) (Protein phosphatase 1L) (Protein phosphatase 1-like) Length = 360 Score = 34.7 bits (78), Expect = 0.20 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R +MED + DL+ + P + +G+FDGHGG AA Y Sbjct: 100 GRRDHMEDRFEVLTDLANKTHP--------SIFGIFDGHGGETAAEY 138
>PP2CL_HUMAN (Q5SGD2) Protein phosphatase 2C isoform epsilon (EC 3.1.3.16)| (PP2C-epsilon) (Protein phosphatase 1L) (Protein phosphatase 1-like) Length = 360 Score = 34.7 bits (78), Expect = 0.20 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R +MED + DL+ + P + +G+FDGHGG AA Y Sbjct: 100 GRRDHMEDRFEVLTDLANKTHP--------SIFGIFDGHGGETAAEY 138
>PP2C2_YEAST (P39966) Protein phosphatase 2C homolog 2 (EC 3.1.3.16) (PP2C-2)| Length = 464 Score = 33.9 bits (76), Expect = 0.35 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R MED HI ++ + + AFYG+FDGHGG A Y Sbjct: 31 GWRMSMEDSHILEPNVLTKSDKDHI-----AFYGIFDGHGGAKVAEY 72
>PP2C3_YEAST (P34221) Protein phosphatase 2C homolog 3 (EC 3.1.3.16) (PP2C-3)| Length = 468 Score = 33.5 bits (75), Expect = 0.45 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R MED HI +L A + AFYG+FDGHGG A + Sbjct: 31 GWRMSMEDAHIVEPNLLAESDEEHL-----AFYGIFDGHGGSSVAEF 72
>PP2C2_SCHPO (Q09172) Protein phosphatase 2C homolog 2 (EC 3.1.3.16) (PP2C-2)| Length = 370 Score = 32.7 bits (73), Expect = 0.77 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +3 Query: 522 PSAFYGVFDGHGGPDAAAY 578 P++F+GVFDGHGG A Y Sbjct: 55 PTSFFGVFDGHGGDRVAKY 73
>XYLT1_HUMAN (Q86Y38) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)| (XylT-I) (XT-I) (Peptide O-xylosyltransferase 1) Length = 959 Score = 31.2 bits (69), Expect = 2.2 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -2 Query: 169 PEGGKERRSLPAKTAARSVPTRGGARVSGGRSPFQRSR 56 P +ERR LPA+ AA GG GGR P R+R Sbjct: 61 PAPRRERRDLPAEPAAARGGGGGGGGGGGGRGPQARAR 98
>PP2C_PARTE (P49444) Protein phosphatase 2C (EC 3.1.3.16) (PP2C)| Length = 300 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R MED HI D+ + + +GVFDGHGG + A + Sbjct: 31 GWRNTMEDAHIHRHDIIQDV----------SVFGVFDGHGGREVAQF 67
>PP2CG_BOVIN (P79126) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)| (PP2C-gamma) (Protein phosphatase magnesium-dependent 1 gamma) (Protein phosphatase 1B) (Magnesium-dependent calcium inhibitable phosphatase) (MCPP) Length = 543 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R MED H I +L + +A + V+DGHGG + A Y Sbjct: 34 GWRVSMEDAHNCIQELDSE----------TAMFSVYDGHGGEEVALY 70
>PP2CE_MOUSE (Q8BU27) Protein phosphatase 2C isoform eta (EC 3.1.3.16)| (PP2C-eta) (PP2CE) (Protein phosphatase 1M) Length = 406 Score = 30.4 bits (67), Expect = 3.8 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%) Frame = +3 Query: 504 LLVCP---LPSAFYGVFDGHGGPDAA 572 L VCP L ++ +FDGHGGP AA Sbjct: 54 LTVCPEEFLTGHYWALFDGHGGPAAA 79
>PP2CG_HUMAN (O15355) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)| (PP2C-gamma) (Protein phosphatase magnesium-dependent 1 gamma) (Protein phosphatase 1C) Length = 546 Score = 30.0 bits (66), Expect = 5.0 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 438 GPRRYMEDEHIRIDDLSARLGPLLVCPLPSAFYGVFDGHGGPDAAAY 578 G R MED H I +L + +A + V+DGHGG + A Y Sbjct: 34 GWRVSMEDAHNCIPELDSE----------TAMFSVYDGHGGEEVALY 70
>CD014_BOVIN (Q32LB9) Protein C4orf14 homolog| Length = 694 Score = 30.0 bits (66), Expect = 5.0 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%) Frame = -2 Query: 190 RRLSGQRPEGGKERRSLPAKTA-----ARSVPTRGGARVSGGRSPFQRSRWILGHGFLI 29 +R SG RP GG++ +LP+K++ R + + G V S QRS G +L+ Sbjct: 287 QRSSGDRPRGGEDNANLPSKSSTVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLV 345
>FTSZ3_PYRFU (Q8U0S7) Cell division protein ftsZ homolog 3| Length = 366 Score = 29.6 bits (65), Expect = 6.5 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%) Frame = +3 Query: 345 MGLANTDGATSVSAETLQFVPNIRSGSFADIGPRRYMEDEHIRIDDLSARL-------GP 503 + L + G ++ A L+FV GSFA +G Y + + +I LS + G Sbjct: 192 LALIDVPGEQTLDASDLKFVLRAM-GSFATVG---YAKADATKIKSLSRLIIRSFENEGL 247 Query: 504 LLVCPLPSAFYGVFDGHGGPDA 569 L + SA YG+ HG P+A Sbjct: 248 YLDVNIESALYGLVAIHGPPEA 269
>TRPF_CHLTR (O84331) N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24)| (PRAI) Length = 208 Score = 26.9 bits (58), Expect(2) = 7.0 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -2 Query: 76 SPFQRSRWILGHGFLIW 26 SPFQ + W+LG G +W Sbjct: 144 SPFQHNNWMLGGGVNLW 160 Score = 21.2 bits (43), Expect(2) = 7.0 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 105 GGERGSPEDGRLSS 64 GGERGSP D + S Sbjct: 131 GGERGSPFDWKAFS 144
>PP2C2_ARATH (O04719) Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic| acid-insensitive 2) Length = 423 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3 Query: 519 LPSAFYGVFDGHGGPDAAAY 578 L + F+GV+DGHGG A Y Sbjct: 156 LSAHFFGVYDGHGGSQVANY 175
>XYLT1_PANTR (Q5QQ57) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)| (Peptide O-xylosyltransferase 1) Length = 945 Score = 29.3 bits (64), Expect = 8.5 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -2 Query: 169 PEGGKERRSLPAK-TAARSVPTRGGARVSGGRSPFQRSR 56 P +ERR LPA+ AAR GG GGR P R+R Sbjct: 59 PAPRRERRDLPAEPAAARGGGGGGGGCGGGGRGPQARAR 97
>PHY1_CERPU (P25848) Light-sensor Protein kinase [Includes: Phytochrome;| Protein kinase (EC 2.7.11.1)] Length = 1307 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +1 Query: 58 EIAGKATVLRRPALPPSSARIERLF*PADFSFLSPLLVAGRRDG 189 ++ G T +R P SSA +E+ D S L+P+ V RR G Sbjct: 117 DVLGIGTDIRTLFTPSSSAALEKAAATQDISLLNPITVHCRRSG 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,920,515 Number of Sequences: 219361 Number of extensions: 1310653 Number of successful extensions: 3481 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3478 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
