ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EZY1_CHLRE (Q08354) Ezy-1 protein precursor 33 0.62
2SELD2_EUBAC (Q9L473) Selenide, water dikinase 2 (EC 2.7.9.3) (Se... 29 8.9
3GATA_METTH (O27540) Glutamyl-tRNA(Gln) amidotransferase subunit ... 29 8.9
4PDR1_ORYSA (Q7PC80) Probable pleiotropic drug resistance protein 1 29 8.9

>EZY1_CHLRE (Q08354) Ezy-1 protein precursor|
          Length = 453

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/49 (38%), Positives = 21/49 (42%)
 Frame = -2

Query: 527 DLEDEVPGLDVLGERIGEVGREGDAGAGEHRGPDLHVAVALVDRRERGG 381
           D  D++PGL        E G EGD G GE  G    V    VD    GG
Sbjct: 259 DFLDKMPGLKAAFTGKAEPGAEGDDGEGEEEGEAQDVGEDAVDSSSSGG 307



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>SELD2_EUBAC (Q9L473) Selenide, water dikinase 2 (EC 2.7.9.3) (Selenophosphate|
           synthetase 2) (Selenium donor protein 2)
          Length = 367

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +3

Query: 186 HPRFYLQDASLRQLDVLTANASAAAGVLSTVLQVTVASRNPNDRVGVYYDRLDVYASYKY 365
           HP   L +++ +  DVL        G+++T ++  +  +   D V      L+ YA+  +
Sbjct: 177 HPGRVLSNSAAKVGDVLVLTKPLGTGIINTGIKAGIVGQQTVDEVVKIMTHLNKYAALAF 236

Query: 366 QQITLASA 389
             I + SA
Sbjct: 237 DDIRVNSA 244



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>GATA_METTH (O27540) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 454

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
 Frame = -2

Query: 587 DVVVAGDPAAHLPPDAAVDLDLEDEVPG---------LDVLGERIGEVGREGDAGAGEHR 435
           DV+   DPA     D++ DL++E E+ G         L+V  E I EV  +G  GA E  
Sbjct: 226 DVISGYDPADPTTLDSSPDLEVERELKGLRVGVVREFLEVTDEAIDEV-IQGKLGAMEDE 284

Query: 434 GPDL 423
           G ++
Sbjct: 285 GAEI 288



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>PDR1_ORYSA (Q7PC80) Probable pleiotropic drug resistance protein 1|
          Length = 1468

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 24/78 (30%), Positives = 34/78 (43%)
 Frame = +3

Query: 354  SYKYQQITLASALPPVYQGHGDVEVWSPVLSGPSVPFAPYLADALAKDVQAGYLILQVKI 533
            S  ++ I  +  +P   + HG VE    +L G S  F P +  AL     AG   L   +
Sbjct: 870  SLTFEDIKYSVDMPQEMKAHGIVEDRLELLKGVSGCFRPGVLTALMGVSGAGKTTLMDVL 929

Query: 534  DGRVRWKVGSWISGHYHI 587
             GR   K G +I G+  I
Sbjct: 930  AGR---KTGGYIEGNISI 944


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.281   0.0837    0.206 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,858,217
Number of Sequences: 219361
Number of extensions: 776350
Number of successful extensions: 1143
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 18 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 45 (21.8 bits)
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