ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart31g05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 379 bits (191), Expect = e-102 Identities = 293/327 (89%) Strand = Plus / Plus Query: 263 ggcgacggcggtgctgataggcggcacgctggcgctgatcctgacggcggggacgtggaa 322 |||| ||||| | ||||| ||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 18857132 ggcggcggcgatcctgatcggcgggacggtggcgctgatcctgacggcggggacatggaa 18857191 Query: 323 ggtgaagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccgggac 382 ||||||| | |||||||||| |||||| | ||| ||||||||||||||||||| || | Sbjct: 18857192 ggtgaagatgaaggagtcgcgcgagaagatctgcgacaaggggtgggagtgctcgggtag 18857251 Query: 383 caagtactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacct 442 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18857252 caagtactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacct 18857311 Query: 443 cttcgccaagcgcaacttccccgtcgccaaggccgtcggcttctgggactaccaggcctt 502 |||| ||||||||||| |||||||||| | |||||||||||||||||||||||| |||| Sbjct: 18857312 cttctccaagcgcaacagccccgtcgcccacgccgtcggcttctgggactaccagtcctt 18857371 Query: 503 catcaccgccgcctccctcttcgagaaccagggcttctgcaccaccggcggcatcgacat 562 ||||||||||||| ||||||||||| || |||||||||||||||||||||| | || Sbjct: 18857372 catcaccgccgccgccctcttcgagcccctcggcttctgcaccaccggcggcaagcagat 18857431 Query: 563 gcagatgatggagctctgcgccttcct 589 ||||||||||||||||||||||||||| Sbjct: 18857432 gcagatgatggagctctgcgccttcct 18857458
>dbj|AK103755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143D05, full insert sequence Length = 1649 Score = 379 bits (191), Expect = e-102 Identities = 293/327 (89%) Strand = Plus / Plus Query: 263 ggcgacggcggtgctgataggcggcacgctggcgctgatcctgacggcggggacgtggaa 322 |||| ||||| | ||||| ||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 376 ggcggcggcgatcctgatcggcgggacggtggcgctgatcctgacggcggggacatggaa 435 Query: 323 ggtgaagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccgggac 382 ||||||| | |||||||||| |||||| | ||| ||||||||||||||||||| || | Sbjct: 436 ggtgaagatgaaggagtcgcgcgagaagatctgcgacaaggggtgggagtgctcgggtag 495 Query: 383 caagtactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacct 442 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 caagtactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacct 555 Query: 443 cttcgccaagcgcaacttccccgtcgccaaggccgtcggcttctgggactaccaggcctt 502 |||| ||||||||||| |||||||||| | |||||||||||||||||||||||| |||| Sbjct: 556 cttctccaagcgcaacagccccgtcgcccacgccgtcggcttctgggactaccagtcctt 615 Query: 503 catcaccgccgcctccctcttcgagaaccagggcttctgcaccaccggcggcatcgacat 562 ||||||||||||| ||||||||||| || |||||||||||||||||||||| | || Sbjct: 616 catcaccgccgccgccctcttcgagcccctcggcttctgcaccaccggcggcaagcagat 675 Query: 563 gcagatgatggagctctgcgccttcct 589 ||||||||||||||||||||||||||| Sbjct: 676 gcagatgatggagctctgcgccttcct 702
>dbj|AK069564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019G16, full insert sequence Length = 1455 Score = 379 bits (191), Expect = e-102 Identities = 293/327 (89%) Strand = Plus / Plus Query: 263 ggcgacggcggtgctgataggcggcacgctggcgctgatcctgacggcggggacgtggaa 322 |||| ||||| | ||||| ||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 159 ggcggcggcgatcctgatcggcgggacggtggcgctgatcctgacggcggggacatggaa 218 Query: 323 ggtgaagctcaaggagtcgcaggagaaggtgtgcaacaaggggtgggagtgctccgggac 382 ||||||| | |||||||||| |||||| | ||| ||||||||||||||||||| || | Sbjct: 219 ggtgaagatgaaggagtcgcgcgagaagatctgcgacaaggggtgggagtgctcgggtag 278 Query: 383 caagtactgctgcaaccagaccatcaccgacttcttcaaggtgtaccagttcgagaacct 442 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 caagtactgctgcaacgacaccatcaccgacttcttcaaggtgtaccagttcgagaacct 338 Query: 443 cttcgccaagcgcaacttccccgtcgccaaggccgtcggcttctgggactaccaggcctt 502 |||| ||||||||||| |||||||||| | |||||||||||||||||||||||| |||| Sbjct: 339 cttctccaagcgcaacagccccgtcgcccacgccgtcggcttctgggactaccagtcctt 398 Query: 503 catcaccgccgcctccctcttcgagaaccagggcttctgcaccaccggcggcatcgacat 562 ||||||||||||| ||||||||||| || |||||||||||||||||||||| | || Sbjct: 399 catcaccgccgccgccctcttcgagcccctcggcttctgcaccaccggcggcaagcagat 458 Query: 563 gcagatgatggagctctgcgccttcct 589 ||||||||||||||||||||||||||| Sbjct: 459 gcagatgatggagctctgcgccttcct 485
>gb|AY105990.1| Zea mays PCO087835 mRNA sequence Length = 1619 Score = 349 bits (176), Expect = 6e-93 Identities = 275/308 (89%) Strand = Plus / Plus Query: 282 ggcggcacgctggcgctgatcctgacggcggggacgtggaaggtgaagctcaaggagtcg 341 ||||||||| | |||||| | || ||||||||||||||||||| ||| | ||| ||||| Sbjct: 384 ggcggcacgattgcgctggtgctcacggcggggacgtggaaggccaagataaagaagtcg 443 Query: 342 caggagaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccag 401 ||||||||| | || |||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 444 caggagaagatctgtaacaaggggtgggagtgctcggggagcaagtactgctgcaacgac 503 Query: 402 accatcaccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttc 461 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 504 accatcaccgacttcttcaaggtgtacaagttcgagaacctcttcgccaagcgcaacacc 563 Query: 462 cccgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctc 521 |||||||| | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 564 cccgtcgcgcacgccgtcgggttctgggactaccaggccttcatcaccgccgcggccctc 623 Query: 522 ttcgagaaccagggcttctgcaccaccggcggcatcgacatgcagatgatggagctctgc 581 |||||| |||||| ||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 624 ttcgagccccaggggttctgcaccaccggcggcaagcagatgcagatgatggagctctgc 683 Query: 582 gccttcct 589 |||||||| Sbjct: 684 gccttcct 691
>emb|Z99959.1|MAZ99959 Musa acuminata mRNA for putative chitinase (clone pBAN EU41) Length = 715 Score = 167 bits (84), Expect = 5e-38 Identities = 156/180 (86%) Strand = Plus / Plus Query: 348 aaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccatc 407 ||||||||||||||||||||||||||| ||| | | |||||||||||| | |||||| Sbjct: 156 aaggtgtgcaacaaggggtgggagtgcagcggcagtatctactgctgcaacgacaccatc 215 Query: 408 accgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttccccgtc 467 | ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 216 agcgactacttcaaggtgtaccagttcgagaacctcttcagcaagcgcaactcccccgtg 275 Query: 468 gccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctcttcgag 527 || | |||||||||||||||||||||||| |||||||| ||||||||| ||| |||| Sbjct: 276 gcgcacgccgtcggcttctgggactaccagtccttcatccttgccgcctccgtctacgag 335
>ref|XM_507595.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117 mRNA Length = 1260 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 524 cgag 527 |||| Sbjct: 378 cgag 381
>ref|XM_483389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1260 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 524 cgag 527 |||| Sbjct: 378 cgag 381
>ref|XM_507594.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117 mRNA Length = 1262 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 200 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 259 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 260 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 319 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 320 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 379 Query: 524 cgag 527 |||| Sbjct: 380 cgag 383
>ref|XM_507298.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1081_B12.117 mRNA Length = 1272 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 524 cgag 527 |||| Sbjct: 378 cgag 381
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 25970002 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 25969943 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 25969942 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 25969883 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 25969882 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 25969823 Query: 524 cgag 527 |||| Sbjct: 25969822 cgag 25969819 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tggtgacggtgctgctgctg 260 |||||||||||||||||||| Sbjct: 5662526 tggtgacggtgctgctgctg 5662507
>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1186_G01 Length = 112077 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 5563 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 5504 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 5503 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 5444 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 5443 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 5384 Query: 524 cgag 527 |||| Sbjct: 5383 cgag 5380
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 54879 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 54820 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 54819 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 54760 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 54759 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 54700 Query: 524 cgag 527 |||| Sbjct: 54699 cgag 54696
>dbj|AK106190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E01, full insert sequence Length = 1272 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 524 cgag 527 |||| Sbjct: 378 cgag 381
>dbj|AK104718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A09, full insert sequence Length = 1260 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 524 cgag 527 |||| Sbjct: 378 cgag 381
>dbj|AK102814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M05, full insert sequence Length = 1262 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 200 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 259 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 260 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 319 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 320 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 379 Query: 524 cgag 527 |||| Sbjct: 380 cgag 383
>dbj|AK060080.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D01, full insert sequence Length = 1260 Score = 123 bits (62), Expect = 7e-25 Identities = 154/184 (83%), Gaps = 3/184 (1%) Strand = Plus / Plus Query: 347 gaaggtgtgcaacaaggggtgggagtgctccgggaccaagtactgctgcaaccagaccat 406 ||||| |||| ||||||||||||||||| ||||| | || |||||||||| | ||||| Sbjct: 198 gaaggcgtgcgacaaggggtgggagtgcagcgggagccggttctgctgcaacgacaccat 257 Query: 407 caccgacttcttcaaggtgtaccagttcgagaacctcttcgccaagcgcaacttcc---c 463 |||||||| |||||||| ||||||||||||| | ||||||||| | |||||| || | Sbjct: 258 caccgactacttcaaggcgtaccagttcgaggagctcttcgcccaccgcaacgaccgctc 317 Query: 464 cgtcgccaaggccgtcggcttctgggactaccaggccttcatcaccgccgcctccctctt 523 ||||| | |||| ||| |||||||||||||| |||||||||||||||||| | ||||| Sbjct: 318 gctcgcccacgccgccgggttctgggactaccacgccttcatcaccgccgccgcgctctt 377 Query: 524 cgag 527 |||| Sbjct: 378 cgag 381
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 561 atgcagatgatggagctctgcgccttcct 589 ||||||||||||||||||| ||||||||| Sbjct: 8844980 atgcagatgatggagctctacgccttcct 8845008 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 561 atgcagatgatggagctctgcgccttcct 589 ||||||||| |||||||||||| |||||| Sbjct: 6638131 atgcagatggtggagctctgcggcttcct 6638159
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 561 atgcagatgatggagctctgcgccttcct 589 ||||||||||||||||||| ||||||||| Sbjct: 8844863 atgcagatgatggagctctacgccttcct 8844891 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 561 atgcagatgatggagctctgcgccttcct 589 ||||||||| |||||||||||| |||||| Sbjct: 6638006 atgcagatggtggagctctgcggcttcct 6638034
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 561 atgcagatgatggagctctgcgccttcct 589 ||||||||||||||||||| ||||||||| Sbjct: 33609 atgcagatgatggagctctacgccttcct 33637
>gb|AF007099.1|AF007099 Bromheadia finlaysoniana clone OCHS8 chalcone synthase (CHS) mRNA, complete cds Length = 1439 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||||||||||||| Sbjct: 417 cttctgcaccaccagcggcatcgacatgc 445
>gb|AF007098.1|AF007098 Bromheadia finlaysoniana clone OCHS4 chalcone synthase (CHS) mRNA, complete cds Length = 1382 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||||||||||||| Sbjct: 412 cttctgcaccaccagcggcatcgacatgc 440
>gb|AF007097.1|AF007097 Bromheadia finlaysoniana clone OCHS3 chalcone synthase (CHS) mRNA, complete cds Length = 1445 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||||||||||||| Sbjct: 422 cttctgcaccaccagcggcatcgacatgc 450
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 294 gcgctgatcctgacggcggggacg 317 |||||||||||||||||||||||| Sbjct: 754258 gcgctgatcctgacggcggggacg 754235
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 239 cgtggtgacggtgctgctgctggg 262 |||||||||||||||||||||||| Sbjct: 2249143 cgtggtgacggtgctgctgctggg 2249120
>gb|AY898625.1| Acidovorax avenae subsp. citrulli lytic murein transglycosylase, SAM-dependent methyltransferase, HrcC, HrpD5, HrpB1, HrpB2, HrcJ, HrpB4, HrpF, HrcN, hypothetical protein, GALA, HrcT, HrcU, HrcV, HpaP, HrcQ, HrcR, HrcS, HpaA, HpaB, HrpG, HrpX, and chorismate mutase genes, complete cds; anthranilate para-aminobenzoate synthase component I gene, partial cds; and unknown genes Length = 36584 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 gacggtgctgctgctgggggcg 266 |||||||||||||||||||||| Sbjct: 23955 gacggtgctgctgctgggggcg 23934
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 285 ggcacgctggcgctgatcctg 305 ||||||||||||||||||||| Sbjct: 3564961 ggcacgctggcgctgatcctg 3564941
>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence Length = 163721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 gaaccagggcttctgcaccac 547 ||||||||||||||||||||| Sbjct: 136880 gaaccagggcttctgcaccac 136860
>ref|NM_001030552.1| Gallus gallus ClpX caseinolytic peptidase X homolog (E. coli) (CLPX), mRNA Length = 3757 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aggagaaggtgtgcaacaagg 363 ||||||||||||||||||||| Sbjct: 1202 aggagaaggtgtgcaacaagg 1222
>gb|AY232492.1| Anthurium andraeanum putative chalcone synthase (CHS1) mRNA, complete cds Length = 1514 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 483 cttctgcaccaccagcggcgtcgacatgc 511
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 agatcgtggtgacggtgctgc 255 ||||||||||||||||||||| Sbjct: 141361 agatcgtggtgacggtgctgc 141341
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 caccgaagcaatccagatcga 55 ||||||||||||||||||||| Sbjct: 5374622 caccgaagcaatccagatcga 5374642
>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence Length = 191038 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 gaaccagggcttctgcaccac 547 ||||||||||||||||||||| Sbjct: 183520 gaaccagggcttctgcaccac 183540
>gb|AY257214.1| Ipomoea alba chalcone synthase (CHS-D) mRNA, partial cds Length = 939 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 180 cttctgcaccaccagcggcgtcgacatgc 208
>gb|AY257204.1| Ipomoea hederacea chalcone synthase (CHS-D) gene, exon 2 and partial cds Length = 844 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 181 cttctgcaccaccagcggcgtcgacatgc 209
>emb|CR733868.2|CNS0GT17 Tetraodon nigroviridis full-length cDNA Length = 1858 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 326 atcgtggtgacggcgctgctgctgg 350
>emb|CR731321.2|CNS0GR8E Tetraodon nigroviridis full-length cDNA Length = 1797 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 306 atcgtggtgacggcgctgctgctgg 330
>emb|CR724189.2|CNS0GLQB Tetraodon nigroviridis full-length cDNA Length = 1981 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 327 atcgtggtgacggcgctgctgctgg 351
>emb|CR701279.2|CNS0G423 Tetraodon nigroviridis full-length cDNA Length = 1312 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 317 atcgtggtgacggcgctgctgctgg 341
>emb|CR699265.2|CNS0G2I5 Tetraodon nigroviridis full-length cDNA Length = 1505 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 328 atcgtggtgacggcgctgctgctgg 352
>ref|XM_536224.2| PREDICTED: Canis familiaris similar to Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 (LOC479077), mRNA Length = 4109 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gtggtgacggtgctgctgctg 260 ||||||||||||||||||||| Sbjct: 448 gtggtgacggtgctgctgctg 468
>emb|CR681381.2|CNS0FOPD Tetraodon nigroviridis full-length cDNA Length = 2078 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 318 atcgtggtgacggcgctgctgctgg 342
>emb|CR676740.2|CNS0FL4W Tetraodon nigroviridis full-length cDNA Length = 1566 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 160 atcgtggtgacggcgctgctgctgg 184
>emb|CR665561.2|CNS0FCIN Tetraodon nigroviridis full-length cDNA Length = 2027 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 331 atcgtggtgacggcgctgctgctgg 355
>emb|CR662594.2|CNS0FA88 Tetraodon nigroviridis full-length cDNA Length = 2092 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 327 atcgtggtgacggcgctgctgctgg 351
>emb|CR659457.2|CNS0F7T3 Tetraodon nigroviridis full-length cDNA Length = 1930 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 327 atcgtggtgacggcgctgctgctgg 351
>emb|CR657849.2|CNS0F6KF Tetraodon nigroviridis full-length cDNA Length = 2085 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 atcgtggtgacggtgctgctgctgg 261 ||||||||||||| ||||||||||| Sbjct: 324 atcgtggtgacggcgctgctgctgg 348
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 gaaccagggcttctgcaccac 547 ||||||||||||||||||||| Sbjct: 154315 gaaccagggcttctgcaccac 154295
>ref|XM_969484.1| PREDICTED: Tribolium castaneum similar to CG6154-PA, isoform A (LOC663439), mRNA Length = 2613 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 gtgacggtgctgctgctgggggcgacggc 271 ||||||||||||||||||| |||| |||| Sbjct: 886 gtgacggtgctgctgctggcggcggcggc 914
>gb|DQ421809.1| Anthurium andraeanum chalcone synthase (CHS) gene, complete cds Length = 1700 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 914 cttctgcaccaccagcggcgtcgacatgc 942
>gb|DQ089652.1| Phalaenopsis hybrid cultivar chalcone synthase (CHS5) gene, complete cds Length = 1855 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 577 cttctgcaccaccagcggcgtcgacatgc 605
>emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 in linkage group 23, complete sequence Length = 169760 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 tcatcaccgccgcctccctct 522 ||||||||||||||||||||| Sbjct: 153828 tcatcaccgccgcctccctct 153848
>emb|AJ719607.1| Gallus gallus mRNA for hypothetical protein, clone 4h24 Length = 3757 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aggagaaggtgtgcaacaagg 363 ||||||||||||||||||||| Sbjct: 1202 aggagaaggtgtgcaacaagg 1222
>dbj|AB207101.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: K1 Length = 45779 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 gacggtgctgctgctgggggc 265 ||||||||||||||||||||| Sbjct: 26450 gacggtgctgctgctgggggc 26430
>dbj|AB232914.1| Iris x hollandica IhCHS1 mRNA for chalcone synthase, complete cds Length = 1471 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 468 cttctgcaccaccagcggcgtcgacatgc 496
>dbj|AB219147.1| Iris germanica IgCHS1 mRNA for chalcone synthase, complete cds Length = 1409 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 387 cttctgcaccaccagcggcgtcgacatgc 415
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 ggcgctgatcctgacggcggggacg 317 |||||||| |||||||||||||||| Sbjct: 3835719 ggcgctgaccctgacggcggggacg 3835695
>gb|AF358659.1|AF358659 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDUS1 allele, complete cds Length = 12821 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 12038 cttctgcaccaccagcggcgtcgacatgc 12066
>gb|AF358658.1|AF358658 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex10 allele, complete cds Length = 4781 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 3998 cttctgcaccaccagcggcgtcgacatgc 4026
>gb|AF358657.1|AF358657 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDUS2 allele, complete cds Length = 6135 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 5352 cttctgcaccaccagcggcgtcgacatgc 5380
>gb|AF358656.1|AF358656 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex22 allele, partial cds Length = 4862 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 4142 cttctgcaccaccagcggcgtcgacatgc 4170
>gb|AF358655.1|AF358655 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex9 allele, complete cds Length = 4856 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 4073 cttctgcaccaccagcggcgtcgacatgc 4101
>gb|AF358654.1|AF358654 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex27 allele, complete cds Length = 5147 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 4364 cttctgcaccaccagcggcgtcgacatgc 4392
>gb|AF167991.1|AF167991 Acorus gramineus similar to chaltone synthase gene sequence Length = 823 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 94 cttctgcaccaccagcggcgtcgacatgc 122
>gb|AF111945.1|AF111945 Rhodobacter sphaeroides strain 2.4.1T quinol oxidase subunit II (qoxB) and quinol oxidase subunit I (qoxA) genes, complete cds Length = 3462 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 agatcgtggtgacggtgctgc 255 ||||||||||||||||||||| Sbjct: 1336 agatcgtggtgacggtgctgc 1356
>gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, complete sequence Length = 201464 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gacggtgctgctgctgggggc 265 ||||||||||||||||||||| Sbjct: 148612 gacggtgctgctgctgggggc 148632
>gb|AF206310.1|AF206310 Acorus tatarinowii chalcone sythase (CHS) gene, partial sequence Length = 550 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 66 cttctgcaccaccagcggcgtcgacatgc 94
>dbj|AB058639.2| Lilium hybrid division I LhCHSB mRNA for chalcone synthase, partial cds Length = 1359 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 436 cttctgcaccaccagcggcgtcgacatgc 464
>dbj|AB168090.1| Chlamydomonas reinhardtii Lcr1 mRNA for low-CO2 inducible Myb transcription factor LCR1, complete cds Length = 3216 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gcaccaccggcggcatcgaca 561 ||||||||||||||||||||| Sbjct: 975 gcaccaccggcggcatcgaca 955
>dbj|AB168089.1| Chlamydomonas reinhardtii Lcr1 gene for low-CO2 inducible Myb transcription factor LCR1, complete cds Length = 16651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 gcaccaccggcggcatcgaca 561 ||||||||||||||||||||| Sbjct: 7904 gcaccaccggcggcatcgaca 7884
>dbj|AB004905.1| Ipomoea purpurea DNA for chalcone synthase, complete cds Length = 5718 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 4272 cttctgcaccaccagcggcgtcgacatgc 4300
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 tgctgctgggggcgacggcgg 273 ||||||||||||||||||||| Sbjct: 2599230 tgctgctgggggcgacggcgg 2599210 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cggcacgctggcgctgatcc 303 |||||||||||||||||||| Sbjct: 3185396 cggcacgctggcgctgatcc 3185377
>emb|AL713939.6|CNS07YPL Oryza sativa chromosome 12, . BAC OJ1722_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 561 atgcagatgatggagctctgcgccttcct 589 ||||||||| |||||||||||| |||||| Sbjct: 56136 atgcagatggtggagctctgcggcttcct 56164
>gb|AC132393.4| Mus musculus BAC clone RP23-386K20 from 1, complete sequence Length = 220050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 559 acatgcagatgatggagctct 579 ||||||||||||||||||||| Sbjct: 134773 acatgcagatgatggagctct 134793
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds Length = 1684 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 533 gggcttctgcaccaccggcggcatcgaca 561 ||||||| ||||||||||||||| ||||| Sbjct: 950 gggcttcggcaccaccggcggcaccgaca 978
>dbj|AB027533.1| Ipomoea nil CHS-D gene for chalcone synthase, complete cds Length = 9614 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 3959 cttctgcaccaccagcggcgtcgacatgc 3987
>dbj|AB037680.1| Ipomoea batatas mRNA for chalcone synthase CHS-LF1, complete cds Length = 1212 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| |||| |||||||||| Sbjct: 384 cttctgcaccaccagcgggatcgacatgc 412
>dbj|AB037393.1| Ipomoea batatas chs-DIV mRNA for chalcone synthase CHS-DIV, complete cds Length = 1213 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| |||| |||||||||| Sbjct: 384 cttctgcaccaccagcgggatcgacatgc 412
>dbj|AB001818.1| Ipomoea nil mRNA for chalcone synthase, complete cds Length = 1438 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 464 cttctgcaccaccagcggcgtcgacatgc 492
>dbj|AB001826.1| Ipomoea purpurea mRNA for chalcone synthase, complete cds Length = 1518 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 536 cttctgcaccaccggcggcatcgacatgc 564 ||||||||||||| ||||| ||||||||| Sbjct: 504 cttctgcaccaccagcggcgtcgacatgc 532
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gcggcacgctggcgctgatcctga 306 ||||||||||||| |||||||||| Sbjct: 478838 gcggcacgctggccctgatcctga 478815
>ref|NM_001003162.1| Canis familiaris integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) (ITGB3), mRNA Length = 2374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cggtgctgctgctgggggcg 266 |||||||||||||||||||| Sbjct: 26 cggtgctgctgctgggggcg 45
>gb|AC170424.1| Rhesus Macaque BAC CH250-53N5 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 175619 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gtgtgcaacaaggggtggga 370 |||||||||||||||||||| Sbjct: 105887 gtgtgcaacaaggggtggga 105868
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ctgggggcgacggcggtgct 277 |||||||||||||||||||| Sbjct: 739913 ctgggggcgacggcggtgct 739894
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 aatccagatcgagcaccccgagct 67 |||||||||||| ||||||||||| Sbjct: 3756468 aatccagatcgaacaccccgagct 3756445
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 atcgtggtgacggtgctgctgctg 260 |||||| ||||||||||||||||| Sbjct: 1832487 atcgtgctgacggtgctgctgctg 1832464
>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence Length = 171000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tgctgctgggggcgacggcg 272 |||||||||||||||||||| Sbjct: 137895 tgctgctgggggcgacggcg 137914
>ref|XM_369372.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06092.4) partial mRNA Length = 1008 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 taggcggcacgctggcgctg 299 |||||||||||||||||||| Sbjct: 374 taggcggcacgctggcgctg 355
>ref|XM_960596.1| Neurospora crassa OR74A hypothetical protein (NCU02558.1) partial mRNA Length = 1881 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tggtgacggtgctgctgctg 260 |||||||||||||||||||| Sbjct: 959 tggtgacggtgctgctgctg 940
>ref|XM_331756.1| Neurospora crassa OR74A hypothetical protein (NCU02558.1) partial mRNA Length = 1881 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tggtgacggtgctgctgctg 260 |||||||||||||||||||| Sbjct: 959 tggtgacggtgctgctgctg 940
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 atcgtggtgacggtgctgctgctg 260 |||||| ||||||||||||||||| Sbjct: 3073356 atcgtgctgacggtgctgctgctg 3073333
>gb|AE009108.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 134 of 256 of the complete sequence Length = 11709 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 acgctggcgctgatcctgacggcgggga 315 |||||||||||||||| | ||||||||| Sbjct: 3084 acgctggcgctgatccgggcggcgggga 3057
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 aacaagatcgtggtgacggt 250 |||||||||||||||||||| Sbjct: 79668 aacaagatcgtggtgacggt 79649
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 caccggcggcatcgacatgc 564 |||||||||||||||||||| Sbjct: 1698458 caccggcggcatcgacatgc 1698477
>ref|XM_386423.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06247.1) partial mRNA Length = 1653 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 gcggtgctgataggcggcacgctg 293 |||||||||| ||||||||||||| Sbjct: 567 gcggtgctgagaggcggcacgctg 544
>ref|XM_570988.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE02800) partial mRNA Length = 888 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ctgggggcgacggcggtgct 277 |||||||||||||||||||| Sbjct: 167 ctgggggcgacggcggtgct 148
>ref|XM_843937.1| PREDICTED: Canis familiaris hypothetical LOC55248, transcript variant 1 (LOC612794), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 accagaccatcaccgacttc 416 |||||||||||||||||||| Sbjct: 274 accagaccatcaccgacttc 293
>ref|XM_852593.1| PREDICTED: Canis familiaris hypothetical LOC55248, transcript variant 2 (LOC612794), mRNA Length = 862 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 accagaccatcaccgacttc 416 |||||||||||||||||||| Sbjct: 274 accagaccatcaccgacttc 293
>gb|AC002456.2| Homo sapiens BAC clone CTB-13L3 from 7, complete sequence Length = 156399 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggaaggtgaagctcaaggag 338 |||||||||||||||||||| Sbjct: 117332 ggaaggtgaagctcaaggag 117351
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 atcgtggtgacggtgctgctgctg 260 |||||| ||||||||||||||||| Sbjct: 2803432 atcgtgctgacggtgctgctgctg 2803409
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 250 tgctgctgctgggggcgacggcggtgctgataggcggcac 289 |||||||| |||| || ||||||||||||| |||||||| Sbjct: 3169270 tgctgctggtgggcgccccggcggtgctgatgggcggcac 3169231
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 acggtgctgctgctgggggc 265 |||||||||||||||||||| Sbjct: 29258 acggtgctgctgctgggggc 29239
>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2, complete sequence Length = 261927 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gagtcgcaggagaaggtgtg 355 |||||||||||||||||||| Sbjct: 34350 gagtcgcaggagaaggtgtg 34369
>gb|AE005703.1| Caulobacter crescentus CB15 section 29 of 359 of the complete genome Length = 11092 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 acttccccgtcgccaaggcc 476 |||||||||||||||||||| Sbjct: 8984 acttccccgtcgccaaggcc 9003
>ref|NM_001014459.1| Drosophila melanogaster dpr3 CG33516-PA (dpr3) mRNA, complete cds Length = 1848 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tgctgctgggggcgacggcg 272 |||||||||||||||||||| Sbjct: 891 tgctgctgggggcgacggcg 872
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 acgctggcgctgatcctgacggcgggga 315 |||||||||||||||| | ||||||||| Sbjct: 1479774 acgctggcgctgatccgggcggcgggga 1479747
>gb|AD001672.1| Persea americana chalcone synthase (CHS) mRNA, complete cds Length = 1483 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ttctgcaccaccggcggcatcgacatgc 564 |||||||||||| ||||| ||||||||| Sbjct: 470 ttctgcaccaccagcggcgtcgacatgc 497
>gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216030 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ctgctctgaccaccggagga 181 |||||||||||||||||||| Sbjct: 114095 ctgctctgaccaccggagga 114114
>emb|BX005480.12| Mouse DNA sequence from clone RP23-142M12 on chromosome X, complete sequence Length = 196326 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 gacatgcagatgatggagct 577 |||||||||||||||||||| Sbjct: 147717 gacatgcagatgatggagct 147698
>gb|AC009238.4| Homo sapiens BAC clone RP11-468G5 from 2, complete sequence Length = 202361 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggaaggtgaagctcaaggag 338 |||||||||||||||||||| Sbjct: 86706 ggaaggtgaagctcaaggag 86725
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tggtgacggtgctgctgctg 260 |||||||||||||||||||| Sbjct: 117902 tggtgacggtgctgctgctg 117883
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tggtgacggtgctgctgctg 260 |||||||||||||||||||| Sbjct: 17151 tggtgacggtgctgctgctg 17132
>ref|XM_316488.2| Anopheles gambiae str. PEST ENSANGP00000025112 (ENSANGG00000021508), partial mRNA Length = 1291 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ggtgacggtgctgctgctgg 261 |||||||||||||||||||| Sbjct: 415 ggtgacggtgctgctgctgg 434
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 455 caacttccccgtcgccaaggccgtcggc 482 ||||||||| |||| ||||||||||||| Sbjct: 5482517 caacttcccggtcggcaaggccgtcggc 5482490
>gb|AF116270.1|AF116270 Canis familiaris platelet glycoprotein IIIa (GPIIIa) mRNA, complete cds Length = 2355 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cggtgctgctgctgggggcg 266 |||||||||||||||||||| Sbjct: 26 cggtgctgctgctgggggcg 45
>gb|AF170525.1|AF170525 Canis familiaris glycoprotein GPIIIa (GPIIIa) mRNA, complete cds Length = 2374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cggtgctgctgctgggggcg 266 |||||||||||||||||||| Sbjct: 26 cggtgctgctgctgggggcg 45
>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete sequence Length = 346734 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tgctgctgggggcgacggcg 272 |||||||||||||||||||| Sbjct: 182579 tgctgctgggggcgacggcg 182598
>gb|AC004716.1|AC004716 Drosophila melanogaster DNA sequence (P1 DS00164 (D269)), complete sequence Length = 86391 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 tgctgctgggggcgacggcg 272 |||||||||||||||||||| Sbjct: 38711 tgctgctgggggcgacggcg 38730
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 535 gcttctgcaccaccggcggcatcgacat 562 |||||||| | ||||||||||||||||| Sbjct: 155853 gcttctgcccgaccggcggcatcgacat 155826
>gb|AF026065.1|AF026065 Ralstonia sp. E2 positive phenol-degradative gene regulator (poxR), phenol hydroxylase components (poxA, poxB, poxC, poxD, poxE, poxF), and ferredoxin-like protein (poxG) genes, complete cds Length = 9511 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gtgacggtgctgctgctggg 262 |||||||||||||||||||| Sbjct: 2788 gtgacggtgctgctgctggg 2807
>gb|AC140224.4| Mus musculus BAC clone RP24-483E8 from 1, complete sequence Length = 175026 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gaaggtgaagctcaaggagt 339 |||||||||||||||||||| Sbjct: 36436 gaaggtgaagctcaaggagt 36417
>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ttctgcaccaccggcggcatcgacatgc 564 |||||||||||| ||||| ||||||||| Sbjct: 403 ttctgcaccaccagcggcgtcgacatgc 430
>dbj|AB002582.1| Perilla frutescens mRNA for chalcone synthase, complete cds Length = 1577 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 ttctgcaccaccggcggcatcgacatgc 564 |||||||||||| ||||| ||||||||| Sbjct: 460 ttctgcaccaccagcggcgtcgacatgc 487 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,892,588 Number of Sequences: 3902068 Number of extensions: 3892588 Number of successful extensions: 87952 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86219 Number of HSP's gapped (non-prelim): 1733 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
