>COPD_YEAST (P43621) Coatomer subunit delta (Delta-coat protein) (Delta-COP)|
          Length = 545

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = -3

Query: 358 SYLAPADQGRWLSDPATSARLIRFRCARVNAEGGREREVGIVPNPSCEKSMDGGSDPAPA 179
           S+ A A+     S  ATS R        +   GG  R  G  P PS   S   G+ P P 
Sbjct: 222 SHAAAAEVAPVASPMATSQRAGHSATGGMKLGGGAGRRAGAAPRPSAISSASSGTPPPPE 281

Query: 178 RESPRS 161
            + P +
Sbjct: 282 EDVPEN 287

>Y1586_HAEIN (P44263) Hypothetical protein HI1586|
          Length = 519

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 207 MDFSQLGFGTIPTSLSLPPSALTRAHLNRIRRALVAGSLNHRPWSAGARYEQLLSLVARC 386
           +DFS   +  +P  L++  +  TR  L  +   ++ GSL    W  G+ +  L+  V   
Sbjct: 17  IDFSSSVWSIVPALLAIILAIATRRVLVSLSAGIIIGSLMLSDWQIGSAFNYLVKNVVSL 76

Query: 387 VHA 395
           V+A
Sbjct: 77  VYA 79

>PHNC1_HALMA (Q5V6B8) Phosphonates import ATP-binding protein phnC 1 (EC|
           3.6.3.28)
          Length = 273

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 383 SSDQAQELLIPGASRPGTMVERSGNERSPD 294
           + DQ   L   GAS PGT  ER+G E+  D
Sbjct: 237 TDDQLDALFAAGASTPGTDAERTGTEKESD 266

>CS021_PONPY (Q5RBH3) Protein C19orf21 homolog|
          Length = 685

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -1

Query: 255 ERERWG*YQTQAARNPWTAAQIPRQPEKALDRNPPP 148
           ERERW   Q QA R   T A +   P+    R P P
Sbjct: 140 ERERWAIIQGQAVRKSGTVATLQAAPDHGDPRTPGP 175

>VGLG_VHSV0 (P27662) Spike glycoprotein precursor|
          Length = 507

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 240 PTSLSLPPSALTRAHLNRIRRALVAGSLNHRPW 338
           PTS +L     TR H +R+ +A+VAG   H PW
Sbjct: 216 PTSETLEGHLFTRTHDHRVVKAIVAG---HHPW 245

>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3|
           (ERIC-1)
          Length = 838

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 54  SPPPRRIAHRLGGPSGL-PPAREXXXXXXXXXXXXXFDRGLSRAGAGSEPP 203
           +PPPRR+  R    SGL PP R+              D G  R+GAG +PP
Sbjct: 351 APPPRRLGER----SGLKPPLRKAAVRQQKAPQEVEEDDG--RSGAGEDPP 395

>CS021_HUMAN (Q8IVT2) Protein C19orf21|
          Length = 679

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -1

Query: 255 ERERWG*YQTQAARNPWTAAQIPRQPEKALDRNPPP 148
           ERERW   Q QA R   T A +   P+    R P P
Sbjct: 140 ERERWAVIQGQAVRKSSTVATLQGTPDHGDPRTPGP 175

>RX_HUMAN (Q9Y2V3) Retinal homeobox protein Rx (Retina and anterior neural|
           fold homeobox protein)
          Length = 346

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 280 ARVNAEGGREREVGIVPNPSCEKSMDGGSDPAP 182
           A   A G +ER+  +   P+C K+ + GS+P+P
Sbjct: 53  AERGARGAKERDRRLGARPACPKAPEEGSEPSP 85


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,234,671
Number of Sequences: 219361
Number of extensions: 1835755
Number of successful extensions: 4910
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4908
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)