ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR626933.1| Triticum turgidum 44 0.52
2emb|CR626929.1| Triticum aestivum 44 0.52
3dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox ... 44 0.52
4gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.52
5gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN... 44 0.52
6gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN... 44 0.52
7gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome... 42 2.0
8ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa836... 42 2.0
9ref|XM_478450.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
10gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, co... 42 2.0
11gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, com... 42 2.0
12gb|AC123533.4| Mus musculus BAC clone RP23-269E2 from chromosome... 42 2.0
13ref|XM_846405.1| PREDICTED: Canis familiaris similar to chondroi... 42 2.0
14gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, co... 42 2.0
15gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, c... 42 2.0
16dbj|AK054933.1| Homo sapiens cDNA FLJ30371 fis, clone BRACE2007836 42 2.0
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
19dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
24emb|AL929455.8| Mouse DNA sequence from clone RP23-463J10 on chr... 42 2.0
25ref|XM_468763.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
26ref|XM_468762.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
27gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 40 8.1
28gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
29ref|NM_177407.2| Mus musculus calcium/calmodulin-dependent prote... 40 8.1
30gb|AC112929.12| Mus musculus chromosome 14, clone RP23-432A7, co... 40 8.1
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
32gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 40 8.1
33emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg... 40 8.1
34gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosom... 40 8.1
35gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome... 40 8.1
36gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosom... 40 8.1
37gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, comple... 40 8.1
38gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, com... 40 8.1
39emb|AL593856.8| Human DNA sequence from clone RP11-8J9 on chromo... 40 8.1
40emb|AL365230.8| Human DNA sequence from clone RP11-384G23 on chr... 40 8.1
41emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase 40 8.1
42gb|AC093453.40| Canis familiaris strain Doberman Pinscher clone ... 40 8.1
43gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complet... 40 8.1
44gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, comp... 40 8.1
45dbj|AK083245.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.1
46gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 8.1
47dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
48dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
50emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chro... 40 8.1
51gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G... 40 8.1
52gb|AC079610.4| Homo sapiens BAC clone RP11-105N14 from 2, comple... 40 8.1
53dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
54dbj|AK122410.2| Mus musculus mRNA for mKIAA0968 protein 40 8.1
55gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, co... 40 8.1
56gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, co... 40 8.1
57dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
58gb|AC005747.1|AC005747 Homo sapiens chromosome 17, clone hRPK.15... 40 8.1
59gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
60gb|AC134623.5| Mus musculus BAC clone RP23-20K21 from 8, complet... 40 8.1
61emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, co... 40 8.1
62dbj|AB011076.1| Homo sapiens mRNA for UTF1, complete cds 40 8.1 
>emb|CR626933.1| Triticum turgidum
          Length = 25216

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 426   tactccctccgtaaagaaatat 447
             ||||||||||||||||||||||
Sbjct: 11672 tactccctccgtaaagaaatat 11693
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>emb|CR626929.1| Triticum aestivum
          Length = 20745

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 426   tactccctccgtaaagaaatat 447
             ||||||||||||||||||||||
Sbjct: 14390 tactccctccgtaaagaaatat 14411
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>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds
          Length = 9755

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  tactccctccgtaaagaaatat 447
            ||||||||||||||||||||||
Sbjct: 7969 tactccctccgtaaagaaatat 7990
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 61      ccccgcgccggatcgcgcatcg 82
               ||||||||||||||||||||||
Sbjct: 4365151 ccccgcgccggatcgcgcatcg 4365172
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>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene,
            complete cds; and Stowaway MITE and gypsy retrotransposon
            Sukkula, complete sequence
          Length = 12464

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  tactccctccgtaaagaaatat 447
            ||||||||||||||||||||||
Sbjct: 4947 tactccctccgtaaagaaatat 4968
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>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene,
            complete cds; and Stowaway MITE and gypsy retrotransposon
            Sukkula, complete sequence
          Length = 12233

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 426  tactccctccgtaaagaaatat 447
            ||||||||||||||||||||||
Sbjct: 4716 tactccctccgtaaagaaatat 4737
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>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence
          Length = 193364

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    ccatctcttctcccctccccc 64
             |||||||||||||||||||||
Sbjct: 20375 ccatctcttctcccctccccc 20355
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>ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa8362 predicted mRNA
          Length = 1782

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  gctgccgccggcgcgggaggc 121
            |||||||||||||||||||||
Sbjct: 1704 gctgccgccggcgcgggaggc 1724
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>ref|XM_478450.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 453

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 gctgccgccggcgcgggaggc 121
           |||||||||||||||||||||
Sbjct: 335 gctgccgccggcgcgggaggc 355
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>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence
          Length = 190317

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     ccatctcttctcccctccccc 64
              |||||||||||||||||||||
Sbjct: 150180 ccatctcttctcccctccccc 150200



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     ccatctcttctcccctcccc 63
              ||||||||||||||||||||
Sbjct: 150132 ccatctcttctcccctcccc 150151
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>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence
          Length = 195563

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     ccatctcttctcccctccccc 64
              |||||||||||||||||||||
Sbjct: 185486 ccatctcttctcccctccccc 185466



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     ccatctcttctcccctcccc 63
              ||||||||||||||||||||
Sbjct: 185534 ccatctcttctcccctcccc 185515
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>gb|AC123533.4| Mus musculus BAC clone RP23-269E2 from chromosome 14, complete sequence
          Length = 187119

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    tccatctcttctcccctcccc 63
             |||||||||||||||||||||
Sbjct: 29878 tccatctcttctcccctcccc 29898
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>ref|XM_846405.1| PREDICTED: Canis familiaris similar to chondroitin sulfate
           proteoglycan 5 (neuroglycan C) (LOC609188), mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 110 ggcgcgggaggcgtccgcggccgtg 134
           ||||| |||||||||||||||||||
Sbjct: 96  ggcgctggaggcgtccgcggccgtg 120
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>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence
          Length = 236164

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    tccatctcttctcccctcccc 63
             |||||||||||||||||||||
Sbjct: 83083 tccatctcttctcccctcccc 83063
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>gb|AC110285.14| Homo sapiens chromosome 17, clone RP11-1055B8, complete sequence
          Length = 119991

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    tggaggcccctcggggctgcc 106
             |||||||||||||||||||||
Sbjct: 65986 tggaggcccctcggggctgcc 66006
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>dbj|AK054933.1| Homo sapiens cDNA FLJ30371 fis, clone BRACE2007836
          Length = 1890

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 86   tggaggcccctcggggctgcc 106
            |||||||||||||||||||||
Sbjct: 1031 tggaggcccctcggggctgcc 1051
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 101      gctgccgccggcgcgggaggc 121
                |||||||||||||||||||||
Sbjct: 20178950 gctgccgccggcgcgggaggc 20178970
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 423     gtgtactccctccgtaaagaa 443
               |||||||||||||||||||||
Sbjct: 9943590 gtgtactccctccgtaaagaa 9943610
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     gctgccgccggcgcgggaggc 121
               |||||||||||||||||||||
Sbjct: 8714533 gctgccgccggcgcgggaggc 8714513
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>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699D11
          Length = 140825

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   gctgccgccggcgcgggaggc 121
             |||||||||||||||||||||
Sbjct: 31990 gctgccgccggcgcgggaggc 31970
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>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1372_D12
          Length = 179898

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   gctgccgccggcgcgggaggc 121
             |||||||||||||||||||||
Sbjct: 81338 gctgccgccggcgcgggaggc 81358
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>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0521F09
          Length = 164823

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 423    gtgtactccctccgtaaagaa 443
              |||||||||||||||||||||
Sbjct: 124552 gtgtactccctccgtaaagaa 124572
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>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0413A11
          Length = 188440

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 423   gtgtactccctccgtaaagaa 443
             |||||||||||||||||||||
Sbjct: 18283 gtgtactccctccgtaaagaa 18303
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>emb|AL929455.8| Mouse DNA sequence from clone RP23-463J10 on chromosome 2, complete
             sequence
          Length = 84387

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 383   atgcgtgcacgcacgcatgtatgca 407
             |||||||||| ||||||||||||||
Sbjct: 16972 atgcgtgcacacacgcatgtatgca 16996
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>ref|XM_468763.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4371

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 ctggatctggatccggatcc 45
          ||||||||||||||||||||
Sbjct: 59 ctggatctggatccggatcc 78
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>ref|XM_468762.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 26 ctggatctggatccggatcc 45
          ||||||||||||||||||||
Sbjct: 59 ctggatctggatccggatcc 78
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>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence
          Length = 130987

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ggcgcgggatctgagccgcc 202
             ||||||||||||||||||||
Sbjct: 24332 ggcgcgggatctgagccgcc 24313
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18,
              complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    gtactccctccgtaaagaaa 444
              ||||||||||||||||||||
Sbjct: 126902 gtactccctccgtaaagaaa 126883
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>ref|NM_177407.2| Mus musculus calcium/calmodulin-dependent protein kinase II alpha
            (Camk2a), transcript variant 2, mRNA
          Length = 4949

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   catctcttctcccctccccc 64
            ||||||||||||||||||||
Sbjct: 4751 catctcttctcccctccccc 4732
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>gb|AC112929.12| Mus musculus chromosome 14, clone RP23-432A7, complete sequence
          Length = 181674

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 472    attgtggctgaaacaatcat 491
              ||||||||||||||||||||
Sbjct: 150686 attgtggctgaaacaatcat 150705
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ctggatctggatccggatcc 45
                ||||||||||||||||||||
Sbjct: 17579741 ctggatctggatccggatcc 17579722



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ctggatctggatccggatcc 45
                ||||||||||||||||||||
Sbjct: 17574260 ctggatctggatccggatcc 17574241
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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete
             sequence
          Length = 97152

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ctggatctggatccggatcc 45
             ||||||||||||||||||||
Sbjct: 80817 ctggatctggatccggatcc 80836



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ctggatctggatccggatcc 45
             ||||||||||||||||||||
Sbjct: 75336 ctggatctggatccggatcc 75355
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>emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg6 gene)
          Length = 2007

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 419  taatgtgtactccctccgtaaagaaata 446
            |||| ||||||||||| |||||||||||
Sbjct: 1885 taatatgtactccctctgtaaagaaata 1912
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>gb|AC129212.4| Mus musculus BAC clone RP24-373G21 from chromosome 15, complete
             sequence
          Length = 174846

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 399   atgtatgcatatagtatatgtaat 422
             ||||||| ||||||||||||||||
Sbjct: 36452 atgtatgtatatagtatatgtaat 36429
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>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence
          Length = 159308

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     catctcttctcccctccccc 64
              ||||||||||||||||||||
Sbjct: 148854 catctcttctcccctccccc 148873
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>gb|AC124431.4| Mus musculus BAC clone RP24-243J21 from chromosome 18, complete sequence
          Length = 143099

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     catctcttctcccctccccc 64
              ||||||||||||||||||||
Sbjct: 104804 catctcttctcccctccccc 104785
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>gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, complete sequence
          Length = 203804

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 472    attgtggctgaaacaatcat 491
              ||||||||||||||||||||
Sbjct: 172703 attgtggctgaaacaatcat 172684
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>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence
          Length = 165614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    gacttgttgacccatcattt 569
              ||||||||||||||||||||
Sbjct: 131799 gacttgttgacccatcattt 131780
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>emb|AL593856.8| Human DNA sequence from clone RP11-8J9 on chromosome 1 Contains the 5'
              end of the ATPAF1 gene for ATP synthase mitochondrial F1
              complex assembly factor 1, a secreted protein of unknown
              function (SPUF) pseudogene, three novel genes, gene
              KIAA0494, a novel pseudogene and the 5' end of the CYP4B1
              gene for cytochrome P450 family 4 subfamily B polypeptide
              1, complete sequence
          Length = 157373

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    agacagccgtggtggtgggt 525
              ||||||||||||||||||||
Sbjct: 136699 agacagccgtggtggtgggt 136680
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>emb|AL365230.8| Human DNA sequence from clone RP11-384G23 on chromosome 13, complete
             sequence
          Length = 99257

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    ccatctcttctcccctcccc 63
             ||||||||||||||||||||
Sbjct: 24530 ccatctcttctcccctcccc 24511
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>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase
          Length = 5574

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 424  tgtactccctccgtaaagaaatat 447
            ||||||||||||||| ||||||||
Sbjct: 2345 tgtactccctccgtacagaaatat 2322
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>gb|AC093453.40| Canis familiaris strain Doberman Pinscher clone rp81-252i15, complete
             sequence
          Length = 140024

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   ggcgtccgcggccgtgcgag 138
             ||||||||||||||||||||
Sbjct: 36654 ggcgtccgcggccgtgcgag 36673
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>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
          Length = 195930

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    atccatctcttctcccctcc 61
             ||||||||||||||||||||
Sbjct: 47064 atccatctcttctcccctcc 47045
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>gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, complete cds
          Length = 1957

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 419  taatgtgtactccctccgtaaagaaata 446
            |||| ||||||||||| |||||||||||
Sbjct: 1835 taatatgtactccctctgtaaagaaata 1862
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>dbj|AK083245.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630031A06
            product:calcium/calmodulin-dependent protein kinase II
            alpha, full insert sequence
          Length = 4949

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   catctcttctcccctccccc 64
            ||||||||||||||||||||
Sbjct: 4751 catctcttctcccctccccc 4732
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     ctcggggctgccgccggcgc 114
              ||||||||||||||||||||
Sbjct: 129196 ctcggggctgccgccggcgc 129215
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 425      gtactccctccgtaaagaaa 444
                ||||||||||||||||||||
Sbjct: 12377273 gtactccctccgtaaagaaa 12377292
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 425      gtactccctccgtaaagaaa 444
                ||||||||||||||||||||
Sbjct: 20982301 gtactccctccgtaaagaaa 20982320
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ctggatctggatccggatcc 45
                ||||||||||||||||||||
Sbjct: 17573282 ctggatctggatccggatcc 17573263



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       ctggatctggatccggatcc 45
                ||||||||||||||||||||
Sbjct: 17567801 ctggatctggatccggatcc 17567782
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>emb|AL805980.28| Mouse DNA sequence from clone RP23-49C8 on chromosome X, complete
             sequence
          Length = 172618

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    cccctcccccgcgccggatc 74
             ||||||||||||||||||||
Sbjct: 26058 cccctcccccgcgccggatc 26077
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>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete
             sequence
          Length = 133379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   aaagaaatatcatggtcatg 457
             ||||||||||||||||||||
Sbjct: 56383 aaagaaatatcatggtcatg 56364
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>gb|AC079610.4| Homo sapiens BAC clone RP11-105N14 from 2, complete sequence
          Length = 161031

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gcttgggtttggtactatcc 240
             ||||||||||||||||||||
Sbjct: 89758 gcttgggtttggtactatcc 89739
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>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1274F11
          Length = 171257

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   gtactccctccgtaaagaaa 444
             ||||||||||||||||||||
Sbjct: 74390 gtactccctccgtaaagaaa 74409
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>dbj|AK122410.2| Mus musculus mRNA for mKIAA0968 protein
          Length = 4791

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   catctcttctcccctccccc 64
            ||||||||||||||||||||
Sbjct: 4739 catctcttctcccctccccc 4720
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>gb|AC099736.10| Mus musculus chromosome 15, clone RP23-228F5, complete sequence
          Length = 186137

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 399    atgtatgcatatagtatatgtaat 422
              ||||||| ||||||||||||||||
Sbjct: 103533 atgtatgtatatagtatatgtaat 103556
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>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence
          Length = 211915

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 397   gcatgtatgcatatagtatatgta 420
             ||||||||| ||||||||||||||
Sbjct: 72279 gcatgtatgtatatagtatatgta 72302
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone: P0478E02
          Length = 140715

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  gtactccctccgtaaagaaa 444
            ||||||||||||||||||||
Sbjct: 3601 gtactccctccgtaaagaaa 3620
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>gb|AC005747.1|AC005747 Homo sapiens chromosome 17, clone hRPK.150_K_15, complete sequence
          Length = 166701

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 383    atgcgtgcacgcacgcatgtatgc 406
              |||||||||| |||||||||||||
Sbjct: 120384 atgcgtgcacacacgcatgtatgc 120361
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 425      gtactccctccgtaaagaaa 444
                ||||||||||||||||||||
Sbjct: 12384613 gtactccctccgtaaagaaa 12384632
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>gb|AC134623.5| Mus musculus BAC clone RP23-20K21 from 8, complete sequence
          Length = 234976

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    catgtatgcatatagtatat 417
              ||||||||||||||||||||
Sbjct: 139431 catgtatgcatatagtatat 139412
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>emb|CT010408.3| Pan troglodytes chromosome X BAC RP43-014H14, complete sequence
          Length = 172332

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   tatagtatatgtaatgtgta 427
             ||||||||||||||||||||
Sbjct: 40696 tatagtatatgtaatgtgta 40677
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>dbj|AB011076.1| Homo sapiens mRNA for UTF1, complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gccgccggcgcgggaggcgtccgc 127
           ||||| ||||||||||||||||||
Sbjct: 672 gccgcgggcgcgggaggcgtccgc 649


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,018,023
Number of Sequences: 3902068
Number of extensions: 4018023
Number of successful extensions: 92559
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91786
Number of HSP's gapped (non-prelim): 773
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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