Clone Name | bart31g01 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK121862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103A19, full insert sequence Length = 1113 Score = 416 bits (210), Expect = e-113 Identities = 345/390 (88%) Strand = Plus / Plus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 164 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 223 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 307 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 224 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 283 Query: 308 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 367 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 284 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 343 Query: 368 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 427 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 344 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 403 Query: 428 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 487 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 404 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 463 Query: 488 gctcatgagtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacag 547 ||||||||||||||||| |||||||||||||| |||| | ||| ||| |||||| || Sbjct: 464 gctcatgagtgggagaaacatggaacatgctcatccccggtagttaaggatgaattagag 523 Query: 548 tacttcagcactgcccttgatctctgcttc 577 || |||| |||||| ||||| |||| |||| Sbjct: 524 tatttcaccactgctcttgacctctacttc 553
>dbj|AK105061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H09, full insert sequence Length = 1245 Score = 416 bits (210), Expect = e-113 Identities = 345/390 (88%) Strand = Plus / Plus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 194 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 253 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 307 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 254 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 313 Query: 308 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 367 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 314 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 373 Query: 368 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 427 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 374 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 433 Query: 428 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 487 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 434 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 493 Query: 488 gctcatgagtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacag 547 ||||||||||||||||| |||||||||||||| |||| | ||| ||| |||||| || Sbjct: 494 gctcatgagtgggagaaacatggaacatgctcatccccggtagttaaggatgaattagag 553 Query: 548 tacttcagcactgcccttgatctctgcttc 577 || |||| |||||| ||||| |||| |||| Sbjct: 554 tatttcaccactgctcttgacctctacttc 583
>dbj|AK100403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086O14, full insert sequence Length = 1222 Score = 416 bits (210), Expect = e-113 Identities = 345/390 (88%) Strand = Plus / Plus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 184 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 243 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 307 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 244 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 303 Query: 308 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 367 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 304 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 363 Query: 368 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 427 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 364 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 423 Query: 428 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 487 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 424 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 483 Query: 488 gctcatgagtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacag 547 ||||||||||||||||| |||||||||||||| |||| | ||| ||| |||||| || Sbjct: 484 gctcatgagtgggagaaacatggaacatgctcatccccggtagttaaggatgaattagag 543 Query: 548 tacttcagcactgcccttgatctctgcttc 577 || |||| |||||| ||||| |||| |||| Sbjct: 544 tatttcaccactgctcttgacctctacttc 573
>dbj|AK065055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J04, full insert sequence Length = 1107 Score = 416 bits (210), Expect = e-113 Identities = 345/390 (88%) Strand = Plus / Plus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 193 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 252 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 307 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 253 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 312 Query: 308 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 367 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 313 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 372 Query: 368 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 427 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 373 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 432 Query: 428 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 487 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 433 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 492 Query: 488 gctcatgagtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacag 547 ||||||||||||||||| |||||||||||||| |||| | ||| ||| |||||| || Sbjct: 493 gctcatgagtgggagaaacatggaacatgctcatccccggtagttaaggatgaattagag 552 Query: 548 tacttcagcactgcccttgatctctgcttc 577 || |||| |||||| ||||| |||| |||| Sbjct: 553 tatttcaccactgctcttgacctctacttc 582
>dbj|AK061505.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E09, full insert sequence Length = 1242 Score = 416 bits (210), Expect = e-113 Identities = 345/390 (88%) Strand = Plus / Plus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 192 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 251 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccac 307 ||| |||| |||||||||||||||||| ||||||| |||||||| |||||||||||| Sbjct: 252 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgctcggagccgctccag 311 Query: 308 acgttcacgatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgc 367 |||||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||| Sbjct: 312 acgttcacgatccatgggctgtggccggactacgacgacgggacctggccggcgtgctgc 371 Query: 368 cgccacaccagtttcgacatggacaagataacgcctttgaagcccactctggacaagtac 427 ||||||||||| |||||||||||||||||| ||| ||||||| || || || |||||| Sbjct: 372 cgccacaccagcttcgacatggacaagatattgcccctgaagccgacgcttgagaagtac 431 Query: 428 tggccgtccctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgg 487 ||||||||||||||||| || |||||||||||||| |||||||| | ||| ||||||||| Sbjct: 432 tggccgtccctctactgctcatcctcttccacttgcttcagtggcaaggggcccttctgg 491 Query: 488 gctcatgagtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacag 547 ||||||||||||||||| |||||||||||||| |||| | ||| ||| |||||| || Sbjct: 492 gctcatgagtgggagaaacatggaacatgctcatccccggtagttaaggatgaattagag 551 Query: 548 tacttcagcactgcccttgatctctgcttc 577 || |||| |||||| ||||| |||| |||| Sbjct: 552 tatttcaccactgctcttgacctctacttc 581
>gb|AY107592.1| Zea mays PCO142364 mRNA sequence Length = 1160 Score = 274 bits (138), Expect = 3e-70 Identities = 321/382 (84%) Strand = Plus / Plus Query: 196 gcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatctgctcctc 255 |||||| |||||||||||||||||||| | || |||||||| |||||||||||| |||| Sbjct: 163 gcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccatctgcgcctc 222 Query: 256 cacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccacacgttcac 315 ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| Sbjct: 223 cacccgccactgctgcgccaccaacggctgctgccgctcggagccgctccagacgttcac 282 Query: 316 gatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacac 375 |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 283 gatccacgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcac 342 Query: 376 cagtttcgacatggacaagataacgcctttgaagcccactctggacaagtactggccgtc 435 | ||||| |||||||||||| ||| ||||| || ||||||||||||||||| Sbjct: 343 ccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagtactggccgtc 402 Query: 436 cctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgggctcatga 495 ||||||||| || ||| || || ||||| || | ||| | |||||||||||| || Sbjct: 403 cctctactgctccaaatctggaacatgcttcagcggcaagggactcttctgggctcacga 462 Query: 496 gtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacagtacttcag 555 ||||||||| |||||||| ||||| ||||||| |||| ||| ||||||||||| |||| Sbjct: 463 gtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattacagtatttcac 522 Query: 556 cactgcccttgatctctgcttc 577 | ||||||||| |||| |||| Sbjct: 523 ccttgcccttgacctctacttc 544
>gb|BT016738.1| Zea mays clone Contig571 mRNA sequence Length = 1070 Score = 272 bits (137), Expect = 1e-69 Identities = 317/377 (84%) Strand = Plus / Plus Query: 196 gcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatctgctcctc 255 |||||| |||||||||||||||||||| | || |||||||| |||||||||||| |||| Sbjct: 227 gcagcgggagttcgactacttcgcgctctccctccagtggcccggcaccatctgcgcctc 286 Query: 256 cacccgccactgctgcgccgtcaacggctgctgccggaaggagccgctccacacgttcac 315 ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| Sbjct: 287 cacccgccactgctgcgccaccaacggctgctgccgctcggagccgctccagacgttcac 346 Query: 316 gatccacgggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacac 375 |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| ||| Sbjct: 347 gatccacgggctatggccggactacgacgacgggacctggccgtcgtgctgccgccgcac 406 Query: 376 cagtttcgacatggacaagataacgcctttgaagcccactctggacaagtactggccgtc 435 | ||||| |||||||||||| ||| ||||| || ||||||||||||||||| Sbjct: 407 ccaattcgagatggacaagatattgccactgaaggaggtgcttgacaagtactggccgtc 466 Query: 436 cctctactgttcgtcctcttccacttgtttcagtggtaggggccccttctgggctcatga 495 ||||||||| || ||| || || ||||| || | ||| | |||||||||||| || Sbjct: 467 cctctactgctccaaatctggaacatgcttcagcggcaagggactcttctgggctcacga 526 Query: 496 gtgggagaagcatggaacatgctcggcccctgctgttcgggaagaattacagtacttcag 555 ||||||||| |||||||| ||||| ||||||| |||| ||| ||||||||||| |||| Sbjct: 527 gtgggagaaacatggaacctgctctgcccctgtggttcaggatgaattacagtatttcac 586 Query: 556 cactgcccttgatctct 572 | ||||||||| |||| Sbjct: 587 ccttgcccttgacctct 603
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 38986869 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 38986810 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccgg 292 ||| |||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 38986809 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgg 38986765 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 323 gggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacaccagtttc 382 |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| Sbjct: 38986444 gggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttc 38986385 Query: 383 gacatggacaag 394 |||||||||||| Sbjct: 38986384 gacatggacaag 38986373 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 405 tgaagcccactctggacaagtactggccgtccctctactgttcgtcctcttccacttgtt 464 ||||||| || || || ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 38986216 tgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgct 38986157 Query: 465 tcagtggtaggggccccttctgggctcatgag 496 ||||||| | ||| |||||||||||||||||| Sbjct: 38986156 tcagtggcaaggggcccttctgggctcatgag 38986125 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 205 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 250 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 38990534 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 38990489 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 295 ggagccgctccacacgttcacgatcc 320 |||||||||||| ||||||||||||| Sbjct: 38986612 ggagccgctccagacgttcacgatcc 38986587
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 60502 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 60443 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccgg 292 ||| |||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 60442 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgg 60398 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 323 gggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacaccagtttc 382 |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| Sbjct: 60077 gggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttc 60018 Query: 383 gacatggacaag 394 |||||||||||| Sbjct: 60017 gacatggacaag 60006 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 405 tgaagcccactctggacaagtactggccgtccctctactgttcgtcctcttccacttgtt 464 ||||||| || || || ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 59849 tgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgct 59790 Query: 465 tcagtggtaggggccccttctgggctcatgag 496 ||||||| | ||| |||||||||||||||||| Sbjct: 59789 tcagtggcaaggggcccttctgggctcatgag 59758 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 205 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 250 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 64167 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 64122 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 295 ggagccgctccacacgttcacgatcc 320 |||||||||||| ||||||||||||| Sbjct: 60245 ggagccgctccagacgttcacgatcc 60220
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 188 gggaaggagcagcgcgagttcgactacttcgcgctggcgctgcagtggccgggcaccatc 247 |||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4849 gggaagaagcagcgggagttcgactacttcgcgctggcgctgcagtggcctggcaccatc 4790 Query: 248 tgctcctccacccgccactgctgcgccgtcaacggctgctgccgg 292 ||| |||| |||||||||||||||||| ||||||| ||||||||| Sbjct: 4789 tgcgcctcaacccgccactgctgcgccatcaacggatgctgccgg 4745 Score = 111 bits (56), Expect = 3e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 323 gggctgtggccggactacgatgacgggacttggccgtcgtgctgccgccacaccagtttc 382 |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||| ||| Sbjct: 4424 gggctgtggccggactacgacgacgggacctggccggcgtgctgccgccacaccagcttc 4365 Query: 383 gacatggacaag 394 |||||||||||| Sbjct: 4364 gacatggacaag 4353 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 405 tgaagcccactctggacaagtactggccgtccctctactgttcgtcctcttccacttgtt 464 ||||||| || || || ||||||||||||||||||||||| || |||||||||||||| | Sbjct: 4196 tgaagccgacgcttgagaagtactggccgtccctctactgctcatcctcttccacttgct 4137 Query: 465 tcagtggtaggggccccttctgggctcatgag 496 ||||||| | ||| |||||||||||||||||| Sbjct: 4136 tcagtggcaaggggcccttctgggctcatgag 4105 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 205 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 250 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 8514 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 8469 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 295 ggagccgctccacacgttcacgatcc 320 |||||||||||| ||||||||||||| Sbjct: 4592 ggagccgctccagacgttcacgatcc 4567
>ref|NM_190274.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 205 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 250 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 135 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 180 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 ttcacgatccacgggctgtggccg 334 ||||||||||| |||||||||||| Sbjct: 241 ttcacgatccatgggctgtggccg 264
>dbj|AK106167.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-B08, full insert sequence Length = 1177 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 205 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 250 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 196 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 241 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 ttcacgatccacgggctgtggccg 334 ||||||||||| |||||||||||| Sbjct: 302 ttcacgatccatgggctgtggccg 325
>dbj|AK061032.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H06, full insert sequence Length = 1047 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 205 gttcgactacttcgcgctggcgctgcagtggccgggcaccatctgc 250 ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 102 gttcgactactacgtgctggcgctgcagtggccgggcaccgtctgc 147 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 311 ttcacgatccacgggctgtggccg 334 ||||||||||| |||||||||||| Sbjct: 208 ttcacgatccatgggctgtggccg 231
>gb|AF139660.1|AF139660 Calystegia sepium RNase-like protein mRNA, complete cds Length = 981 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 327 tgtggccggactacgatgacgggacttggccgtcgtgctg 366 ||||||| || |||||||| |||||||||||||| ||||| Sbjct: 243 tgtggccagattacgatgatgggacttggccgtcttgctg 282
>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence Length = 245991 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 552 tcagcactgcccttgatctctg 573 |||||||||||||||||||||| Sbjct: 15958 tcagcactgcccttgatctctg 15979
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 112 ggcggcctgggcgctggtcgccgccg 137 ||||||| |||||||||||||||||| Sbjct: 3302223 ggcggccagggcgctggtcgccgccg 3302198
>gb|AC124829.10| Mus musculus chromosome 1, clone RP24-131G15, complete sequence Length = 189923 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 552 tcagcactgcccttgatctctg 573 |||||||||||||||||||||| Sbjct: 34281 tcagcactgcccttgatctctg 34260
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 ccgtcgggaaggagcagcgcg 203 ||||||||||||||||||||| Sbjct: 656857 ccgtcgggaaggagcagcgcg 656837 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ggcgctggtcgccgccggac 140 |||||||||||||||||||| Sbjct: 3069348 ggcgctggtcgccgccggac 3069367
>gb|AC102197.7| Mus musculus chromosome 1, clone RP24-466J11, complete sequence Length = 150253 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cagagggaaagggggagaagg 63 ||||||||||||||||||||| Sbjct: 118960 cagagggaaagggggagaagg 118980
>ref|XM_427412.1| PREDICTED: Gallus gallus similar to cadherin-related neuronal receptor 2 (LOC429857), partial mRNA Length = 1311 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 52 ctgcaggcggcctgggcgctggtcg 76
>ref|XM_414464.1| PREDICTED: Gallus gallus similar to cadherin-related neuronal receptor c02 (LOC416131), mRNA Length = 9674 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 244 ctgcaggcggcctgggcgctggtcg 268
>gb|AY519500.1| Gallus gallus CNR/Pcdh-alpha gene cluster, complete sequence Length = 187517 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 96858 ctgcaggcggcctgggcgctggtcg 96882 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 87797 ctgcaggcggcctgggcgctggtcg 87821 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 78614 ctgcaggcggcctgggcgctggtcg 78638 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 69589 ctgcaggcggcctgggcgctggtcg 69613 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 63166 ctgcaggcggcctgggcgctggtcg 63190 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 53721 ctgcaggcggcctgggcgctggtcg 53745 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 43847 ctgcaggcggcctgggcgctggtcg 43871 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 33461 ctgcaggcggcctgggcgctggtcg 33485 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 24648 ctgcaggcggcctgggcgctggtcg 24672 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 18205 ctgcaggcggcctgggcgctggtcg 18229 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 7844 ctgcaggcggcctgggcgctggtcg 7868 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 52 ctgcaggcggcctgggcgctggtcg 76
>ref|XM_967887.1| PREDICTED: Tribolium castaneum similar to CG3779-PA, isoform A (LOC661741), mRNA Length = 1567 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ctgctgccggaaggagccgct 303 ||||||||||||||||||||| Sbjct: 817 ctgctgccggaaggagccgct 797
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctg 127 ||||||||||||||||||||| Sbjct: 178004 ctgctggcggcctgggcgctg 178024
>gb|AC162880.4| Mus musculus chromosome 1, clone RP24-275N11, complete sequence Length = 164201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cagagggaaagggggagaagg 63 ||||||||||||||||||||| Sbjct: 6347 cagagggaaagggggagaagg 6367
>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete sequence Length = 229443 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 cagagggaaagggggagaagg 63 ||||||||||||||||||||| Sbjct: 127197 cagagggaaagggggagaagg 127217
>ref|NG_004818.1| Gallus gallus cadherin-related neuronal receptor 10 pseudogene (CNRV10) Length = 98944 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 18399 ctgcaggcggcctgggcgctggtcg 18423 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 9338 ctgcaggcggcctgggcgctggtcg 9362 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcg 131 |||| |||||||||||||||||||| Sbjct: 155 ctgcaggcggcctgggcgctggtcg 179
>emb|AL772311.19| Mouse DNA sequence from clone RP23-87P16 on chromosome 4, complete sequence Length = 234393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 gagggaaagggggagaaggag 65 ||||||||||||||||||||| Sbjct: 18483 gagggaaagggggagaaggag 18503
>ref|NM_145071.1| Homo sapiens cytokine inducible SH2-containing protein (CISH), mRNA Length = 2035 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 715 ctgctcctccaccagccactgctg 738
>gb|AY427442.1|AY427440S3 Leishmania amazonensis meta 1 protein gene, complete cds Length = 1905 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agagggaaagggggagaagg 63 |||||||||||||||||||| Sbjct: 1385 agagggaaagggggagaagg 1366
>gb|AC120388.11| Mus musculus chromosome 9, clone RP24-300P2, complete sequence Length = 157596 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ttctgggctcatgagtggga 501 |||||||||||||||||||| Sbjct: 8458 ttctgggctcatgagtggga 8477
>ref|XM_419571.1| PREDICTED: Gallus gallus similar to hypothetical protein DKFZp547N043 (LOC421530), mRNA Length = 1813 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 acttcgcgctggcgctgcag 232 |||||||||||||||||||| Sbjct: 170 acttcgcgctggcgctgcag 189
>gb|AC148244.3| Mus musculus chromosome 9, clone wi1-65440F10, complete sequence Length = 41220 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ttctgggctcatgagtggga 501 |||||||||||||||||||| Sbjct: 6712 ttctgggctcatgagtggga 6693
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tccttcgccccggccgccgt 186 |||||||||||||||||||| Sbjct: 89855 tccttcgccccggccgccgt 89874
>gb|BC064354.1| Homo sapiens cytokine inducible SH2-containing protein, transcript variant 2, mRNA (cDNA clone MGC:75431 IMAGE:4804249), complete cds Length = 1971 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 611 ctgctcctccaccagccactgctg 634
>gb|BC031590.1| Homo sapiens cytokine inducible SH2-containing protein, transcript variant 2, mRNA (cDNA clone MGC:34375 IMAGE:5182644), complete cds Length = 2044 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 706 ctgctcctccaccagccactgctg 729
>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence Length = 179128 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 gggaaagggggagaaggaga 66 |||||||||||||||||||| Sbjct: 140265 gggaaagggggagaaggaga 140284
>gb|AY623660.1| Homo sapiens TNF receptor-associated factor 2 (TRAF2) gene, complete cds Length = 43834 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 cgacccacccagcagccagaggga 50 |||||| ||||||||||||||||| Sbjct: 2285 cgaccctcccagcagccagaggga 2262
>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0022L07, complete sequence Length = 142134 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tccttcgccccggccgccgt 186 |||||||||||||||||||| Sbjct: 1633 tccttcgccccggccgccgt 1652
>gb|BC042767.1| Mus musculus RIKEN cDNA 4930473A06 gene, mRNA (cDNA clone IMAGE:4485078), partial cds Length = 950 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 748 gacgtgcttgctggcggcctgtgcgctg 775
>ref|XM_986746.1| PREDICTED: Mus musculus RIKEN cDNA 4930473A06 gene, transcript variant 2 (4930473A06Rik), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 2505 gacgtgcttgctggcggcctgtgcgctg 2532
>ref|XM_987819.1| PREDICTED: Mus musculus RIKEN cDNA 4930473A06 gene, transcript variant 1 (4930473A06Rik), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 2505 gacgtgcttgctggcggcctgtgcgctg 2532
>ref|XM_001001288.1| PREDICTED: Mus musculus RIKEN cDNA 4930473A06 gene, transcript variant 2 (4930473A06Rik), mRNA Length = 4525 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 2505 gacgtgcttgctggcggcctgtgcgctg 2532
>gb|AF035946.1| Homo sapiens cytokine-inducible inhibitor of signalling type IV gene, complete cds Length = 3784 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 1839 ctgctcctccaccagccactgctg 1862
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 cagagggaaagggggagaaggaga 66 ||||||| |||||||||||||||| Sbjct: 96772 cagaggggaagggggagaaggaga 96749
>gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, complete sequence Length = 157782 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agagggaaagggggagaagg 63 |||||||||||||||||||| Sbjct: 79992 agagggaaagggggagaagg 79973
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 cctgctggcggcctgggcgctggt 129 ||||||||||||||| |||||||| Sbjct: 1971333 cctgctggcggcctgcgcgctggt 1971356
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 cgacccacccagcagccagaggga 50 |||||| ||||||||||||||||| Sbjct: 165642 cgaccctcccagcagccagaggga 165619
>emb|AL031430.2|HS406M12 Human DNA sequence from clone RP3-406M12 on chromosome 1p34.1-34.3 Contains a CpG island, complete sequence Length = 159281 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ccagcagccagagggaaagg 54 |||||||||||||||||||| Sbjct: 152265 ccagcagccagagggaaagg 152284
>gb|AC093120.4| Mus musculus Strain C57BL6/J Chromosome 6 BAC, RP23-125A24, Complete Sequence, complete sequence Length = 187794 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cagagggaaagggggagaag 62 |||||||||||||||||||| Sbjct: 120695 cagagggaaagggggagaag 120714
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgctggtcgccgccggactg 142 |||||||||||||||||||| Sbjct: 161405 cgctggtcgccgccggactg 161386
>gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agagggaaagggggagaagg 63 |||||||||||||||||||| Sbjct: 111741 agagggaaagggggagaagg 111722
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 ctgctggcggcctgggcgctggtcgccg 134 |||||||||| | ||||||||||||||| Sbjct: 202347 ctgctggcggtcggggcgctggtcgccg 202374
>emb|BX936355.7| Mouse DNA sequence from clone RP24-541A1 on chromosome 4 Contains part of a novel gene and the Cbx3-ps3 gene for chromobox homolog 3 (Drosophila HP1 gamma), pseudogene 3, complete sequence Length = 144108 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 48594 gacgtgcttgctggcggcctgtgcgctg 48621
>gb|AF521878.1| Streptomyces narbonensis desosamine biosynthetic gene cluster, partial sequence Length = 17665 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggcctgggcgctggtcgccgccgg 138 ||||||||||||| |||||||||| Sbjct: 2841 ggcctgggcgctgctcgccgccgg 2864
>gb|AY013907.1| Misopates orontium isolate B27 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013906.1| Misopates orontium isolate B26 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013905.1| Antirrhinum molle isolate 17 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013904.1| Antirrhinum molle isolate 16 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013903.1| Antirrhinum molle isolate 13 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013902.1| Antirrhinum molle isolate 10 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013901.1| Antirrhinum molle isolate 3 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013900.1| Antirrhinum molle isolate 2 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013899.1| Antirrhinum graniticum isolate B24 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013898.1| Antirrhinum majus subsp. cirrhigerum isolate Gala9 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>gb|AY013897.1| Antirrhinum majus subsp. cirrhigerum isolate Muel7 SC (SC) gene, partial cds Length = 653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atccacgggctgtggccgga 336 |||||||||||||||||||| Sbjct: 67 atccacgggctgtggccgga 86
>emb|CR594144.1| full-length cDNA clone CS0DI031YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1973 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 704 ctgctcctccaccagccactgctg 727
>gb|AC096920.2| Homo sapiens chromosome 3 clone RP11-804H8, complete sequence Length = 192324 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 105755 ctgctcctccaccagccactgctg 105778
>gb|AC025419.42| Homo sapiens 12 BAC RP11-230G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170331 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ccacccagcagccagaggga 50 |||||||||||||||||||| Sbjct: 134950 ccacccagcagccagaggga 134969
>gb|AC015908.10| Homo sapiens chromosome 17, clone RP11-963H4, complete sequence Length = 158693 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agagggaaagggggagaagg 63 |||||||||||||||||||| Sbjct: 153107 agagggaaagggggagaagg 153088
>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence Length = 159838 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 ccacttgtttcagtggtagg 475 |||||||||||||||||||| Sbjct: 121802 ccacttgtttcagtggtagg 121783
>gb|DQ351534.1| Brachyhypopomus pinnicaudatus Nav1.4a (scn4aa) mRNA, partial cds Length = 2391 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gctgttcgggaagaattaca 546 |||||||||||||||||||| Sbjct: 378 gctgttcgggaagaattaca 397
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gcccgggcgtccttcgcccc 177 |||||||||||||||||||| Sbjct: 1662221 gcccgggcgtccttcgcccc 1662240
>dbj|AK039282.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330015D16 product:weakly similar to HYPOTHETICAL 71.7 KDA PROTEIN [Macaca fascicularis], full insert sequence Length = 3066 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 623 gacgtgcttgctggcggcctgtgcgctg 650
>gb|AF035229.1|AF035229 Leishmania amazonensis meta 1 gene, complete cds Length = 1621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 agagggaaagggggagaagg 63 |||||||||||||||||||| Sbjct: 1101 agagggaaagggggagaagg 1082
>gb|AC158186.2| Selaginella moellendorffii clone JGIASXY-5F17, complete sequence Length = 30844 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 482 ttctgggctcatgagtgggagaagcatggaacatgctcgg 521 |||||||| || |||||||||||||| || || ||||||| Sbjct: 12388 ttctgggcgcacgagtgggagaagcacgggacgtgctcgg 12427
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tccttcgccccggccgccgt 186 |||||||||||||||||||| Sbjct: 14142300 tccttcgccccggccgccgt 14142319
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gcgctggtcgccgccggact 141 |||||||||||||||||||| Sbjct: 2020598 gcgctggtcgccgccggact 2020579
>gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, complete sequence Length = 192732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 cccacccagcagccagaggg 49 |||||||||||||||||||| Sbjct: 155453 cccacccagcagccagaggg 155472
>ref|XM_236275.3| PREDICTED: Rattus norvegicus ataxia telangiectasia mutated homolog (human) (Atm), mRNA Length = 9015 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 caccatctgctcctccacccgcca 264 |||||||| ||||||||||||||| Sbjct: 6006 caccatctcctcctccacccgcca 6029
>gb|AF035947.1|AF035947 Homo sapiens cytokine-inducible inhibitor of signalling type 1b mRNA, complete cds Length = 5043 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 3742 ctgctcctccaccagccactgctg 3765
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 cagagggaaagggggagaag 62 |||||||||||||||||||| Sbjct: 84765 cagagggaaagggggagaag 84784
>gb|AY893118.1| Synthetic construct Homo sapiens clone FLH119803.01L cytokine inducible SH2-containing protein (CISH) mRNA, partial cds Length = 777 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 593 ctgctcctccaccagccactgctg 616
>gb|AY890637.1| Synthetic construct Homo sapiens clone FLH119807.01X cytokine inducible SH2-containing protein (CISH) mRNA, complete cds Length = 777 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 593 ctgctcctccaccagccactgctg 616
>gb|AF132297.2|AF132297 Homo sapiens cytokine-inducible SH2-containing protein (G18) mRNA, complete cds Length = 2168 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 872 ctgctcctccaccagccactgctg 895
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 actacttcgcgctggcgctg 229 |||||||||||||||||||| Sbjct: 2923355 actacttcgcgctggcgctg 2923374
>gb|AC138309.4| Mus musculus BAC clone RP23-250M10 from 13, complete sequence Length = 180449 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 gggaaagggggagaaggaga 66 |||||||||||||||||||| Sbjct: 77054 gggaaagggggagaaggaga 77073
>gb|AC006230.11|AC006230 Homo sapiens chromosome 4 clone C0287J14 map 4p16, complete sequence Length = 166998 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 ccacttgtttcagtggtagg 475 |||||||||||||||||||| Sbjct: 69076 ccacttgtttcagtggtagg 69057
>gb|U03114.2|SAU03114 Streptomyces albus lipase precursor (lip) and LipR genes, complete cds; and unknown gene Length = 4855 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tccttcgccccggccgccgt 186 |||||||||||||||||||| Sbjct: 2843 tccttcgccccggccgccgt 2824
>gb|AF050173.1|AF050173 Ovis aries mitochondrial branched chain aminotransferase precursor, mRNA, nuclear gene encoding mitochondrial protein, partial cds Length = 1399 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 gcccctgctgttcgggaaga 540 |||||||||||||||||||| Sbjct: 99 gcccctgctgttcgggaaga 118
>dbj|AP000679.7| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-21E14, complete sequence Length = 132641 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 ccacccagcagccagaggga 50 |||||||||||||||||||| Sbjct: 56324 ccacccagcagccagaggga 56343
>gb|AF079762.1|AF079762 Streptomyces venezuelae desosamine biosynthetic gene cluster, complete sequence Length = 12441 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggcctgggcgctggtcgccgccgg 138 ||||||||||||| |||||||||| Sbjct: 1534 ggcctgggcgctgctcgccgccgg 1557
>emb|AL844153.3| Mouse DNA sequence from clone RP24-147L2 on chromosome 4, complete sequence Length = 193917 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gacgtgcctgctggcggcctgggcgctg 127 ||||||| ||||||||||||| |||||| Sbjct: 72072 gacgtgcttgctggcggcctgtgcgctg 72099
>emb|Z77852.1|HSLUCA2 Human DNA sequence from clone XXcos-2 on chromosome 3, complete sequence Length = 22861 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 3240 ctgctcctccaccagccactgctg 3263
>emb|AL732552.8| Mouse DNA sequence from clone RP23-145O14 on chromosome 4, complete sequence Length = 203332 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gagggaaagggggagaaggagaca 68 ||||||||||| |||||||||||| Sbjct: 123301 gagggaaagggagagaaggagaca 123278
>dbj|D83532.1| Homo sapiens mRNA for cytokine-inducible SH2-containing protein, complete cds Length = 1742 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ctgctcctccacccgccactgctg 270 ||||||||||||| |||||||||| Sbjct: 704 ctgctcctccaccagccactgctg 727 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,227,938 Number of Sequences: 3902068 Number of extensions: 4227938 Number of successful extensions: 93108 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91988 Number of HSP's gapped (non-prelim): 1120 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)