>EC_MAIZE (P43401) EC protein homolog (Zinc-metallothionein class II)|
          Length = 76

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +1

Query: 295 QRDHSTCRC-----CSSCATGQSS-PSGEHNNNHKAQPFLYCRCSKSSS 423
           QR+H+TC C     CS C  G+++ PSG  N          C C+  +S
Sbjct: 27  QREHTTCGCGEHCECSPCTCGRATMPSGRENRRANCSCGASCNCASCAS 75

>EC3_WHEAT (P30570) EC protein III (Zinc-metallothionein class II)|
          Length = 80

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
 Frame = +1

Query: 301 DHSTCRC-----CSSCATG-QSSPSGEHNNNHKAQPFLYCRCSKSSS 423
           +H+TC C     C+ CA G + +PSG  N          C C+   S
Sbjct: 31  EHTTCGCGEHCGCNPCACGREGTPSGRANRRANCSCGAACNCASCGS 77

>EC1_WHEAT (P30569) EC protein I/II (Zinc-metallothionein class II)|
          Length = 80

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
 Frame = +1

Query: 301 DHSTCRC-----CSSCATG-QSSPSGEHNNNHKAQPFLYCRCSKSSS 423
           +H+TC C     C+ CA G + +PSG  N          C C+   S
Sbjct: 31  EHTTCGCGEHCGCNPCACGREGTPSGRANRRANCSCGAACNCASCGS 77

>YJG4_YEAST (P47038) Hypothetical 13.9 kDa protein in SMC3-MRPL8 intergenic|
           region
          Length = 131

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 409 SSGSRGRVALCDCCCVRRTATIVRW 335
           SSGS G    C CCC+ R + +  W
Sbjct: 50  SSGSGGTCCCCCCCCLCRDSCVSTW 74

>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691|
          Length = 283

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = +1

Query: 295 QRDHS-----TCRCCSSCATGQSSPSGEHNNNHKAQPFLYCRCSKSSSQHTS 435
           Q+DH       C  C    T  S+ +  H  + +  P++ C C KS S  +S
Sbjct: 158 QQDHLGQRPYRCDICGKSFTQSSTLAVHHRTHLEPAPYICCECGKSFSNSSS 209

>NKX28_MOUSE (O70584) Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H)|
           (Homeobox protein Nkx-2.9)
          Length = 235

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
 Frame = +2

Query: 224 LSRARTPGHFSGLRSSSGDQHHRRNGTTARAVV---VHHAPPDNRRRPANTTTITKRNPS 394
           L R R PG       ++    H   G   R +V   VH  PP N  R   T+ + +   S
Sbjct: 136 LKRGRAPGITEPSDMAASSDLHAAPGLLRRVMVPVLVHDRPPSNNGRGEGTSAVPQEKCS 195

Query: 395 STAAALSHLP 424
           +  A    +P
Sbjct: 196 ARLATACPVP 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,334,627
Number of Sequences: 219361
Number of extensions: 759544
Number of successful extensions: 2611
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2603
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)