ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart31f11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185177.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 394 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 453 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 454 atcacgtgcgtgaacca 470
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 35463962 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 35464021 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 35464022 atcacgtgcgtgaacca 35464038 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 5771309 ggcggcggcggtggcgcgag 5771328 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 4507144 ggctggcggcggcggtggcg 4507125
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 35554034 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 35554093 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 35554094 atcacgtgcgtgaacca 35554110 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 5770522 ggcggcggcggtggcgcgag 5770541 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 4507259 ggctggcggcggcggtggcg 4507240
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Minus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 23664 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 23605 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 23604 atcacgtgcgtgaacca 23588
>dbj|AK105978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F09, full insert sequence Length = 1474 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 412 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 471 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 472 atcacgtgcgtgaacca 488
>dbj|AK104518.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D02, full insert sequence Length = 1433 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 382 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 441 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 442 atcacgtgcgtgaacca 458
>dbj|AK071606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099J20, full insert sequence Length = 1470 Score = 113 bits (57), Expect = 7e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 470 gagttccgggggctggcggcggcggtggcgcgagcagcgacggacgatcggacggtgatc 529 |||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||| Sbjct: 408 gagttccgggggttggcggcggcggtggcgcgggcggcgacggatgaccggacggtgatc 467 Query: 530 atcacgtgcgtgaacca 546 ||||||||||||||||| Sbjct: 468 atcacgtgcgtgaacca 484
>ref|XM_463635.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacc 578 |||||||||||||||||| |||||| |||| |||||||||||||| ||||| || |||| Sbjct: 293 ggacggtgatcatcacgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacc 352 Query: 579 t 579 | Sbjct: 353 t 353
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacc 578 |||||||||||||||||| |||||| |||| |||||||||||||| ||||| || |||| Sbjct: 4204 ggacggtgatcatcacgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacc 4263 Query: 579 t 579 | Sbjct: 4264 t 4264 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggac 577 ||||||||||||| |||| |||||| |||| |||||||||||||| || ||| ||||| Sbjct: 7693 ggacggtgatcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgatggac 7751
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacc 578 |||||||||||||||||| |||||| |||| |||||||||||||| ||||| || |||| Sbjct: 40205252 ggacggtgatcatcacgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacc 40205311 Query: 579 t 579 | Sbjct: 40205312 t 40205312 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 520 gacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacct 579 ||||||||||||||||| |||||| | || |||||||||||||||||||| || ||||| Sbjct: 40199667 gacggtgatcatcacgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacct 40199726 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 539 gtgaaccaggcctgggcggcgccgggctccctgctggacctgtt 582 |||||| |||| |||||||||||||| || |||||||||||||| Sbjct: 40186698 gtgaacgaggcgtgggcggcgccggggtcgctgctggacctgtt 40186741 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggac 577 ||||||||||||| |||| |||||| |||| |||||||||||||| || ||| ||||| Sbjct: 40208741 ggacggtgatcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgatggac 40208799 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 20762287 gcggcggtggcgctagcagcgacg 20762264
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacc 578 |||||||||||||||||| |||||| |||| |||||||||||||| ||||| || |||| Sbjct: 148336 ggacggtgatcatcacgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacc 148395 Query: 579 t 579 | Sbjct: 148396 t 148396 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 520 gacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacct 579 ||||||||||||||||| |||||| | || |||||||||||||||||||| || ||||| Sbjct: 142751 gacggtgatcatcacgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacct 142810 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 539 gtgaaccaggcctgggcggcgccgggctccctgctggacctgtt 582 |||||| |||| |||||||||||||| || |||||||||||||| Sbjct: 129782 gtgaacgaggcgtgggcggcgccggggtcgctgctggacctgtt 129825 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggac 577 ||||||||||||| |||| |||||| |||| |||||||||||||| || ||| ||||| Sbjct: 151825 ggacggtgatcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgatggac 151883
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacc 578 |||||||||||||||||| |||||| |||| |||||||||||||| ||||| || |||| Sbjct: 71030 ggacggtgatcatcacgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacc 71089 Query: 579 t 579 | Sbjct: 71090 t 71090 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 520 gacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacct 579 ||||||||||||||||| |||||| | || |||||||||||||||||||| || ||||| Sbjct: 65445 gacggtgatcatcacgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacct 65504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 539 gtgaaccaggcctgggcggcgccgggctccctgctggacctgtt 582 |||||| |||| |||||||||||||| || |||||||||||||| Sbjct: 52476 gtgaacgaggcgtgggcggcgccggggtcgctgctggacctgtt 52519 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggac 577 ||||||||||||| |||| |||||| |||| |||||||||||||| || ||| ||||| Sbjct: 74519 ggacggtgatcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgatggac 74577
>dbj|AK071688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113H16, full insert sequence Length = 1334 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacc 578 |||||||||||||||||| |||||| |||| |||||||||||||| ||||| || |||| Sbjct: 321 ggacggtgatcatcacgtcggtgaacgaggcgtgggcggcgccggggtccctcctcgacc 380 Query: 579 t 579 | Sbjct: 381 t 381
>ref|XM_463633.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 696 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 520 gacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggacct 579 ||||||||||||||||| |||||| | || |||||||||||||||||||| || ||||| Sbjct: 273 gacggtgatcatcacgtcggtgaacgacgcgtgggcggcgccgggctccctcctcgacct 332
>ref|XM_463631.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 539 gtgaaccaggcctgggcggcgccgggctccctgctggacctgtt 582 |||||| |||| |||||||||||||| || |||||||||||||| Sbjct: 325 gtgaacgaggcgtgggcggcgccggggtcgctgctggacctgtt 368
>ref|XM_463636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggac 577 ||||||||||||| |||| |||||| |||| |||||||||||||| || ||| ||||| Sbjct: 293 ggacggtgatcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgatggac 351
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 519 ggacggtgatcatcacgtgcgtgaaccaggcctgggcggcgccgggctccctgctggac 577 ||||||||||||| |||| |||||| |||| |||||||||||||| || ||| ||||| Sbjct: 91 ggacggtgatcatgacgtcggtgaacgaggcgtgggcggcgccggggtcgctgatggac 149
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 206 cgggcgccggccgccgggctcagccgcg 233 ||||||||||||||||||||| |||||| Sbjct: 2731055 cgggcgccggccgccgggctcggccgcg 2731082 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 cgccgccgcggcgctcaccatc 187 |||||||||||||||||||||| Sbjct: 242817 cgccgccgcggcgctcaccatc 242796 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 tcgtcctcggcgccgccgcgg 176 ||||||||||||||||||||| Sbjct: 1420308 tcgtcctcggcgccgccgcgg 1420328 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 tcgtcctcggcgccgccgcgg 176 ||||||||||||||||||||| Sbjct: 953607 tcgtcctcggcgccgccgcgg 953627 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cgccgccgcggcgctcacca 185 |||||||||||||||||||| Sbjct: 4635941 cgccgccgcggcgctcacca 4635960 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 ccgggctcagccgcgccagg 238 |||||||||||||||||||| Sbjct: 3028663 ccgggctcagccgcgccagg 3028682
>gb|AE012091.1| Xanthomonas axonopodis pv. citri str. 306, section 469 of 469 of the complete genome Length = 14120 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 ccggcgaccagcaccaccgccgc 295 ||||||||||||||||||||||| Sbjct: 13061 ccggcgaccagcaccaccgccgc 13039
>gb|M73232.1|ASTATPASEH Avena sativa vacuolar H+-ATPase 16 kDa proteolipid subunit (vatp-P1) mRNA, complete cds Length = 821 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 159 tcctcggcgccgccgcggcgctc 181 ||||||||||||||||||||||| Sbjct: 174 tcctcggcgccgccgcggcgctc 196
>gb|BT016629.1| Zea mays clone Contig462 mRNA sequence Length = 784 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 449 ggagcgaaggaggaggcggcgg 470 |||||||||||||||||||||| Sbjct: 166 ggagcgaaggaggaggcggcgg 145
>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence Length = 173681 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 441 gagaaaagggagcgaaggagga 462 |||||||||||||||||||||| Sbjct: 143994 gagaaaagggagcgaaggagga 143973
>gb|AC147455.3| Atelerix albiventris clone LB4-341B4, complete sequence Length = 164065 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagcagcg 508 |||| |||||||||||||||||||| Sbjct: 44119 ggcgccggcggtggcgcgagcagcg 44143
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagc 504 ||||||||||||||||||||| Sbjct: 70491 ggcggcggcggtggcgcgagc 70511 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagc 504 ||||||||||||||||||||| Sbjct: 53713 ggcggcggcggtggcgcgagc 53733
>ref|NM_015976.2| Homo sapiens sorting nexin 7 (SNX7), transcript variant 1, mRNA Length = 1798 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gggctggcggcggcggtggcg 499 ||||||||||||||||||||| Sbjct: 31 gggctggcggcggcggtggcg 51
>emb|AL627442.10| Human DNA sequence from clone RP11-296E3 on chromosome 1 Contains the 3' end of the SNX7 gene for sorting nexin7, complete sequence Length = 131815 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gggctggcggcggcggtggcg 499 ||||||||||||||||||||| Sbjct: 914 gggctggcggcggcggtggcg 934
>emb|AL844584.4| Mouse DNA sequence from clone RP23-309F17 on chromosome 11 Contains the 5' end of a variant of the Sgcd gene for sarcoglycan delta (dystrophin-associated glycoprotein) and a CpG island, complete sequence Length = 196442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 aacacaacaacaatcacaaag 382 ||||||||||||||||||||| Sbjct: 121357 aacacaacaacaatcacaaag 121377
>emb|CR610212.1| full-length cDNA clone CS0DI035YG01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1736 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gggctggcggcggcggtggcg 499 ||||||||||||||||||||| Sbjct: 8 gggctggcggcggcggtggcg 28
>gb|AE012445.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 353 of 460 of the complete genome Length = 11728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 gctggcggcggcggtggcgcg 501 ||||||||||||||||||||| Sbjct: 4043 gctggcggcggcggtggcgcg 4023
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 gggcgccggccgccgggctca 227 ||||||||||||||||||||| Sbjct: 826006 gggcgccggccgccgggctca 825986
>gb|AC095031.2| Homo sapiens chromosome 1 clone RP11-14P1, complete sequence Length = 165165 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 gggctggcggcggcggtggcg 499 ||||||||||||||||||||| Sbjct: 144559 gggctggcggcggcggtggcg 144579
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagcagcg 508 |||| |||||||||||||||||||| Sbjct: 974675 ggcgccggcggtggcgcgagcagcg 974699
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gctggcggcggcggtggcgcg 501 ||||||||||||||||||||| Sbjct: 1063633 gctggcggcggcggtggcgcg 1063653
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ccttcgtcctcggcgccgccgcggc 177 |||||||||| |||||||||||||| Sbjct: 5757650 ccttcgtcctgggcgccgccgcggc 5757626 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 8220815 gcggcggtggcgctagcagcgacg 8220838
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagc 504 ||||||||||||||||||||| Sbjct: 24467818 ggcggcggcggtggcgcgagc 24467838 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagc 504 ||||||||||||||||||||| Sbjct: 24451040 ggcggcggcggtggcgcgagc 24451060 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctggcggcggcggtggcgc 500 |||||||||||||||||||| Sbjct: 28279910 gctggcggcggcggtggcgc 28279929
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ccttcgtcctcggcgccgccgcggc 177 |||||||||| |||||||||||||| Sbjct: 73179 ccttcgtcctgggcgccgccgcggc 73155
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ccttcgtcctcggcgccgccgcggc 177 |||||||||| |||||||||||||| Sbjct: 149797 ccttcgtcctgggcgccgccgcggc 149773
>dbj|AK104048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H03, full insert sequence Length = 1710 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 ccttcgtcctcggcgccgccgcggc 177 |||||||||| |||||||||||||| Sbjct: 280 ccttcgtcctgggcgccgccgcggc 304
>dbj|AK103442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129D17, full insert sequence Length = 1664 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagc 504 ||||||||||||||||||||| Sbjct: 1315 ggcggcggcggtggcgcgagc 1335
>dbj|AK071518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101M15, full insert sequence Length = 1724 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 ccttcgtcctcggcgccgccgcggc 177 |||||||||| |||||||||||||| Sbjct: 289 ccttcgtcctgggcgccgccgcggc 313
>gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, complete sequence Length = 202915 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 441 gagaaaagggagcgaaggaggaggc 465 |||||||||||| |||||||||||| Sbjct: 102733 gagaaaagggagggaaggaggaggc 102709
>ref|XM_483052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgagcagc 507 ||||||||||| |||||||||||| Sbjct: 994 ggcggcggcggcggcgcgagcagc 1017
>gb|AY722648.1| Canine papillomavirus 2, complete genome Length = 8101 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 aggaggaggcggcggagttc 475 |||||||||||||||||||| Sbjct: 3193 aggaggaggcggcggagttc 3174
>gb|AY781412.1| Chlamydomonas incerta pyruvate dehydrogenase kinase-like protein (pdk) gene, complete cds Length = 7295 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 1435 ggggctggcggcggcggtgg 1416
>gb|AC116601.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0079B05, complete sequence Length = 159382 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 33228 ggcggcggcggtggcgcgag 33209
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tcggcgccgccgcggcgctc 181 |||||||||||||||||||| Sbjct: 1948912 tcggcgccgccgcggcgctc 1948931
>gb|AY731530.1| Arachis hypogaea clone PM711 microsatellite sequence Length = 300 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgagcagc 507 ||||||||||| |||||||||||| Sbjct: 94 ggcggcggcggcggcgcgagcagc 71
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 gctggcggcggcggtggcgc 500 |||||||||||||||||||| Sbjct: 64152 gctggcggcggcggtggcgc 64171
>gb|AY355293.1| Oryza sativa (japonica cultivar-group) Squiq LTR retrotransposon complete sequence Length = 8600 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 5895 ggcggcggcggtggcgcgag 5876
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcggcgccgccgcggcgctc 181 |||||||||||||||||||| Sbjct: 1482193 tcggcgccgccgcggcgctc 1482174
>gb|AY526434.1| Arachis hypogaea clone PM678 microsatellite sequence Length = 305 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgagcagc 507 ||||||||||| |||||||||||| Sbjct: 52 ggcggcggcggcggcgcgagcagc 29
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ccgccgcggcgctcaccatcgtcg 191 ||||||||||||| |||||||||| Sbjct: 66175 ccgccgcggcgctgaccatcgtcg 66152
>ref|XM_977043.1| PREDICTED: Mus musculus cDNA sequence BC053440 (BC053440), mRNA Length = 2987 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 623 ggggctggcggcggcggtgg 604 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 581 ggggctggcggcggcggtgg 562
>ref|XM_134209.7| PREDICTED: Mus musculus cDNA sequence BC053440 (BC053440), mRNA Length = 2987 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 623 ggggctggcggcggcggtgg 604 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 581 ggggctggcggcggcggtgg 562
>ref|XM_977182.1| PREDICTED: Mus musculus cDNA sequence BC053440 (BC053440), mRNA Length = 2863 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 497 ggggctggcggcggcggtgg 478 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 455 ggggctggcggcggcggtgg 436
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cggcgcgtcaggtggtggcc 154 |||||||||||||||||||| Sbjct: 1333899 cggcgcgtcaggtggtggcc 1333918
>gb|AY345222.1| Oryza sativa (japonica cultivar-group) transcription factor MADS47-2 mRNA, complete cds Length = 966 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 3 ggctggcggcggcggtggcg 22
>gb|AY345221.1| Oryza sativa (japonica cultivar-group) transcription factor MADS47 mRNA, complete cds Length = 960 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 3 ggctggcggcggcggtggcg 22
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 cctcggcgccgccgcggcgc 179 |||||||||||||||||||| Sbjct: 3216591 cctcggcgccgccgcggcgc 3216572
>ref|XM_811341.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507049.179) partial mRNA Length = 3402 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 443 gaaaagggagcgaaggaggaggcggcgg 470 ||||| ||||||||||| |||||||||| Sbjct: 733 gaaaaaggagcgaaggaagaggcggcgg 760
>gb|AC123529.3| Mus musculus BAC clone RP23-425M11 from chromosome 8, complete sequence Length = 181535 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 114135 ggggctggcggcggcggtgg 114154 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 114093 ggggctggcggcggcggtgg 114112
>ref|XM_544223.2| PREDICTED: Canis familiaris similar to dachshund b (LOC487095), mRNA Length = 2412 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 cgggggctggcggcggcggtggcg 499 ||||||||||||||||||| |||| Sbjct: 389 cgggggctggcggcggcggcggcg 366
>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence Length = 230139 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 36260 ggggctggcggcggcggtgg 36279 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ggggctggcggcggcggtgg 497 |||||||||||||||||||| Sbjct: 36218 ggggctggcggcggcggtgg 36237
>gb|AC135462.22| Medicago truncatula clone mth2-35o17, complete sequence Length = 118383 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 aacacaacaacaatcacaaa 381 |||||||||||||||||||| Sbjct: 31063 aacacaacaacaatcacaaa 31082
>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence Length = 130555 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 aacacaacaacaatcacaaa 381 |||||||||||||||||||| Sbjct: 109522 aacacaacaacaatcacaaa 109503
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 139 ggcggcggcggtggcgcgag 158
>gb|AY190297.1| Streptomyces tendae xylanase gene, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cctcggcgccgccgcggcgc 179 |||||||||||||||||||| Sbjct: 135 cctcggcgccgccgcggcgc 154
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 1234516 ggcggcggcggtggcgcgag 1234497
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cggcgccgccgcggcgctca 182 |||||||||||||||||||| Sbjct: 296260 cggcgccgccgcggcgctca 296279
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cggcgccgccgcggcgctca 182 |||||||||||||||||||| Sbjct: 21327 cggcgccgccgcggcgctca 21346
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 cggcgccgccgcggcgctca 182 |||||||||||||||||||| Sbjct: 310132 cggcgccgccgcggcgctca 310151
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcggcgccgccgcggcgctc 181 |||||||||||||||||||| Sbjct: 1369302 tcggcgccgccgcggcgctc 1369283
>emb|AJ536158.1|OSA536158 Oryza sativa (japonica cultivar-group) mRNA for MADS Domain containing Protein Length = 1045 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 3 ggctggcggcggcggtggcg 22
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 ccgccgcggcgctcaccatcgtcg 191 ||||||||||||| |||||||||| Sbjct: 49770 ccgccgcggcgctgaccatcgtcg 49747
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 25161 ggctggcggcggcggtggcg 25180
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 118754 ggcggcggcggtggcgcgag 118735
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 59862 ggcggcggcggtggcgcgag 59843
>dbj|AB169766.1| Macaca fascicularis brain cDNA, clone: QtrA-11757, similar to human tubulin, beta, 5 (TUBB5), mRNA, RefSeq: NM_006087.2 Length = 2380 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcggcggcggtggcgcgagc 504 |||||||||||||||||||| Sbjct: 110 gcggcggcggtggcgcgagc 91
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 gagcgaaggaggaggcggcggagt 473 |||||||||||||||||| ||||| Sbjct: 221897 gagcgaaggaggaggcggaggagt 221874
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 19351220 ggctggcggcggcggtggcg 19351201 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 1234516 ggcggcggcggtggcgcgag 1234497
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gctggcggcggcggtggcgc 500 |||||||||||||||||||| Sbjct: 14758514 gctggcggcggcggtggcgc 14758495
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgagcagc 507 ||||||||||| |||||||||||| Sbjct: 24044546 ggcggcggcggcggcgcgagcagc 24044523
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 24785553 gcggcggtggcgctagcagcgacg 24785576 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 24779793 gcggcggtggcgctagcagcgacg 24779816
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 35478349 ggcggcggcggtggcgcgag 35478368
>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR09L14, complete sequence Length = 167368 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 gagcgaaggaggaggcggcggagt 473 |||||||||||||||||| ||||| Sbjct: 131717 gagcgaaggaggaggcggaggagt 131694
>dbj|AB181854.1| Malus x domestica MdADC mRNA for arginine decarboxylase, complete cds Length = 3344 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 tccggcgaccagcaccaccgccgc 295 ||||||||||| |||||||||||| Sbjct: 778 tccggcgaccatcaccaccgccgc 801
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 112436 ggctggcggcggcggtggcg 112417
>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0066C06 Length = 162304 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 105245 gcggcggtggcgctagcagcgacg 105222
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cggccgccgggctcagccgc 232 |||||||||||||||||||| Sbjct: 3452406 cggccgccgggctcagccgc 3452425
>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0481F05 Length = 139739 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgagcagc 507 ||||||||||| |||||||||||| Sbjct: 71946 ggcggcggcggcggcgcgagcagc 71923
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 113178 gcggcggtggcgctagcagcgacg 113201
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 14320 gcggcggtggcgctagcagcgacg 14343
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gctggcggcggcggtggcgc 500 |||||||||||||||||||| Sbjct: 43903 gctggcggcggcggtggcgc 43884
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 20004 gcggcggtggcgctagcagcgacg 20027 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 gcggcggtggcgcgagcagcgacg 511 ||||||||||||| |||||||||| Sbjct: 14244 gcggcggtggcgctagcagcgacg 14267
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 89870 ggcggcggcggtggcgcgag 89889
>dbj|AK068192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135O21, full insert sequence Length = 2200 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 gcggcggcggtggcgcgagc 504 |||||||||||||||||||| Sbjct: 54 gcggcggcggtggcgcgagc 35
>gb|AF121865.1|AF121865 Streptomyces avermitilis endo-1,4-beta-xylanase (xyl30) gene, complete cds Length = 2524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cctcggcgccgccgcggcgc 179 |||||||||||||||||||| Sbjct: 265 cctcggcgccgccgcggcgc 284
>dbj|AK066738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087I11, full insert sequence Length = 2277 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 41 ggcggcggcggtggcgcgag 22
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gagcgaaggaggaggcggcg 469 |||||||||||||||||||| Sbjct: 1840760 gagcgaaggaggaggcggcg 1840779
>gb|U47026.1|ALU47026 Alcaligenes latus poly(3-hydroxyalkanoate) synthesis (phaC, phaA, and phaB) genes, complete cds Length = 4674 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 cgtggcggaggccacggcgc 140 |||||||||||||||||||| Sbjct: 355 cgtggcggaggccacggcgc 336
>emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbose (acb) gene cluster, strain SE50/110 Length = 41323 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 tccagtaccgggcgccggccgccg 221 |||||||||||||||||| ||||| Sbjct: 17141 tccagtaccgggcgccgggcgccg 17164
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 ccggcgaccagcaccaccgccgca 296 ||||||||||||||| |||||||| Sbjct: 4304951 ccggcgaccagcaccgccgccgca 4304974
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gctggcggcggcggtggcgc 500 |||||||||||||||||||| Sbjct: 4072113 gctggcggcggcggtggcgc 4072094
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 gtggtggccttcgtcctcggcgccgccg 173 ||||||||||||||| ||| |||||||| Sbjct: 1674662 gtggtggccttcgtcgtcgacgccgccg 1674635
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 ggctggcggcggcggtggcg 499 |||||||||||||||||||| Sbjct: 19362496 ggctggcggcggcggtggcg 19362477 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ggcggcggcggtggcgcgag 503 |||||||||||||||||||| Sbjct: 1234513 ggcggcggcggtggcgcgag 1234494
>gb|AC147646.2| Gallus gallus BAC clone CH261-13L1 from chromosome unknown, complete sequence Length = 238934 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 catggagaaaagggagcgaa 456 |||||||||||||||||||| Sbjct: 71950 catggagaaaagggagcgaa 71931 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,923,407 Number of Sequences: 3902068 Number of extensions: 4923407 Number of successful extensions: 146106 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 139642 Number of HSP's gapped (non-prelim): 6464 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
