Clone Information

BLAST Search Result

Clone Name	bart31f10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CPSF5_XENLA (Q6DJE4) Cleavage and polyadenylation specificity fa...	110	2e-24
2	CPSF5_BRARE (Q7T3C6) Cleavage and polyadenylation specificity fa...	110	2e-24
3	CPSF5_RAT (Q4KM65) Cleavage and polyadenylation specificity fact...	109	6e-24
4	CPSF5_PONPY (Q5RAI8) Cleavage and polyadenylation specificity fa...	109	6e-24
5	CPSF5_MOUSE (Q9CQF3) Cleavage and polyadenylation specificity fa...	109	6e-24
6	CPSF5_HUMAN (O43809) Cleavage and polyadenylation specificity fa...	109	6e-24
7	CPSF5_BOVIN (Q3ZCA2) Cleavage and polyadenylation specificity fa...	109	6e-24
8	SYN3_HUMAN (O14994) Synapsin-3 (Synapsin III)	35	0.15
9	SMYD4_HUMAN (Q8IYR2) SET and MYND domain-containing protein 4	35	0.19
10	RPA1_HUMAN (O95602) DNA-directed RNA polymerase I largest subuni...	33	0.43
11	SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	33	0.73
12	MTCH1_MOUSE (Q791T5) Mitochondrial carrier homolog 1 (Mitochondr...	32	0.96
13	ZAR1_HUMAN (Q86SH2) Zygote arrest 1 (Oocyte-specific maternal ef...	32	1.3
14	UNG_PRVIF (P52506) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)	32	1.6
15	MYSC_ACACA (P10569) Myosin IC heavy chain	32	1.6
16	ISL2_CHICK (P53410) Insulin gene enhancer protein ISL-2 (Islet-2...	32	1.6
17	CAPS2_HUMAN (Q86UW7) Calcium-dependent secretion activator 2 (Ca...	31	2.1
18	UNG_PRVKA (P52507) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)	31	2.1
19	PTPRN_HUMAN (Q16849) Receptor-type tyrosine-protein phosphatase-...	31	2.1
20	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	31	2.1
21	TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.2...	31	2.8
22	IF2_MYCPA (Q73VV4) Translation initiation factor IF-2	31	2.8
23	ADRB1_RAT (P18090) Beta-1 adrenergic receptor (Beta-1 adrenocept...	31	2.8
24	CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel ...	31	2.8
25	TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-d...	30	3.6
26	TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein	30	3.6
27	CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cycli...	30	3.6
28	SMCA2_HUMAN (P51531) Probable global transcription activator SNF...	30	3.6
29	TEGU_EBV (P03186) Large tegument protein	30	3.6
30	NLE1_MOUSE (Q8VEJ4) Notchless homolog 1	30	4.8
31	SIPA1_HUMAN (Q96FS4) Signal-induced proliferation-associated pro...	30	4.8
32	RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun...	30	4.8
33	KLF1_MOUSE (P46099) Krueppel-like factor 1 (Erythroid krueppel-l...	30	4.8
34	SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inosit...	30	4.8
35	SYN3_RAT (O70441) Synapsin-3 (Synapsin III)	30	4.8
36	SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)	30	4.8
37	SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	30	6.2
38	ADRB1_MOUSE (P34971) Beta-1 adrenergic receptor (Beta-1 adrenoce...	30	6.2
39	LRIG1_MOUSE (P70193) Leucine-rich repeats and immunoglobulin-lik...	30	6.2
40	UL51_PRVKA (Q85227) Protein UL51	30	6.2
41	PTPRN_BOVIN (P56722) Receptor-type tyrosine-protein phosphatase-...	30	6.2
42	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	6.2
43	NIFA_AZOCA (P09133) Nif-specific regulatory protein	30	6.2
44	NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytopl...	29	8.1
45	TREA_EMENI (P78617) Acid trehalase precursor (EC 3.2.1.28) (Alph...	29	8.1
46	NLE1_PONPY (Q5RFF8) Notchless homolog 1	29	8.1
47	NLE1_HUMAN (Q9NVX2) Notchless homolog 1	29	8.1
48	PKHA4_RAT (P60669) Pleckstrin homology domain-containing family ...	29	8.1
49	MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (A...	29	8.1
50	NAGPA_HUMAN (Q9UK23) N-acetylglucosamine-1-phosphodiester alpha-...	29	8.1
51	FOXO3_HUMAN (O43524) Forkhead box protein O3A (Forkhead in rhabd...	29	8.1
52	DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor...	29	8.1
53	LYOX_CHICK (Q05063) Protein-lysine 6-oxidase precursor (EC 1.4.3...	29	8.1
54	HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated...	25	9.4

>CPSF5_XENLA (Q6DJE4) Cleavage and polyadenylation specificity factor 5|
          Length = 227

 Score =  110 bits (276), Expect = 2e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFEP 155

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 156 PQYPYIPAHITKPKEHKKLFLVQL 179

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>CPSF5_BRARE (Q7T3C6) Cleavage and polyadenylation specificity factor 5|
          Length = 228

 Score =  110 bits (276), Expect = 2e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 38  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLL 97

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 98  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFEP 156

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQL 180

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>CPSF5_RAT (Q4KM65) Cleavage and polyadenylation specificity factor 5|
           (Nucleoside diphosphate-linked moiety X motif 21) (Nudix
           motif 21)
          Length = 227

 Score =  109 bits (272), Expect = 6e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEP 155

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 156 PQYPYIPAHITKPKEHKKLFLVQL 179

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>CPSF5_PONPY (Q5RAI8) Cleavage and polyadenylation specificity factor 5|
           (Nucleoside diphosphate-linked moiety X motif 21) (Nudix
           motif 21)
          Length = 227

 Score =  109 bits (272), Expect = 6e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEP 155

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 156 PQYPYIPAHITKPKEHKKLFLVQL 179

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>CPSF5_MOUSE (Q9CQF3) Cleavage and polyadenylation specificity factor 5|
           (Nucleoside diphosphate-linked moiety X motif 21) (Nudix
           motif 21)
          Length = 227

 Score =  109 bits (272), Expect = 6e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEP 155

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 156 PQYPYIPAHITKPKEHKKLFLVQL 179

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>CPSF5_HUMAN (O43809) Cleavage and polyadenylation specificity factor 5|
           (Cleavage and polyadenylation specificity factor 25 kDa
           subunit) (CPSF 25 kDa subunit) (Pre-mRNA cleavage factor
           Im 25-kDa subunit) (Nucleoside diphosphate-linked moiety
           X motif 21) (
          Length = 227

 Score =  109 bits (272), Expect = 6e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEP 155

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 156 PQYPYIPAHITKPKEHKKLFLVQL 179

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>CPSF5_BOVIN (Q3ZCA2) Cleavage and polyadenylation specificity factor 5|
           (Nucleoside diphosphate-linked moiety X motif 21) (Nudix
           motif 21)
          Length = 227

 Score =  109 bits (272), Expect = 6e-24
 Identities = 59/144 (40%), Positives = 80/144 (55%)
 Frame = +1

Query: 121 VAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVLL 300
           + +YPL  Y FG K+       + A R  R++  F   G+R  V GVL+V     PHVLL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 301 LQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGMWWRSEFDA 480
           LQ+  + F LPGG L P E +++GLKR ++  L  +D      W I +CIG WWR  F+ 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEP 155

Query: 481 RPFPYPPPNTRASKECVKLFLVRL 552
             +PY P +    KE  KLFLV+L
Sbjct: 156 PQYPYIPAHITKPKEHKKLFLVQL 179

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>SYN3_HUMAN (O14994) Synapsin-3 (Synapsin III)|
          Length = 580

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +3

Query: 228 GSRAPD-LRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQA--CRARSPRPE 377
           G  AP  LRPW P  ++  SP +A   G +L  P P  PPQ    +A+SP+P+
Sbjct: 400 GGTAPSPLRPWAPQIKSAKSPGQAQ-LGPQLGQPQPRPPPQGGPRQAQSPQPQ 451



 Score = 32.7 bits (73), Expect = 0.73
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
 Frame = +3

Query: 261 PAGRAVGSPA--RAAPAGQELLLPAPGRP--------PQACRARSPRPETQALQQASG*G 410
           P  +  GSP+  R +P GQ+ L P  G P        PQ  RA S     QA +  +   
Sbjct: 448 PQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLA 507

Query: 411 SKRRPPLADR 440
           S+ RPP+  R
Sbjct: 508 SQPRPPVQGR 517

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>SMYD4_HUMAN (Q8IYR2) SET and MYND domain-containing protein 4|
          Length = 804

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = +1

Query: 145 YYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVELSGHPHVL--LLQVRNS 318
           Y  G   +RP   + +   A R  A F      TC+  + + +  G+P  L   + +R +
Sbjct: 91  YSKGVSHSRPNTEDMSLCHANRSAALFHLGQYETCLKDINIAQTHGYPERLQPKIMLRKA 150

Query: 319 SFLLPGGRLRPAEQDLQGLKRKLSSKLAAED 411
             L+  GRL+ A Q +  L+R  ++  A  D
Sbjct: 151 ECLVALGRLQEASQTISDLERNFTATPALAD 181

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>RPA1_HUMAN (O95602) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
            (RNA polymerase I 194 kDa subunit) (RPA194)
          Length = 1717

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +1

Query: 277  SGHPHVLLLQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIGM 456
            S HP+ LL   R  +FL    +++ A + L         KL +E+RNG   W  G  + M
Sbjct: 1077 SKHPNTLL---RRGAFLSYSQKIQEAVKAL---------KLESENRNGRRPWDSGRMLRM 1124

Query: 457  WWRSEFDAR 483
            W+  + ++R
Sbjct: 1125 WYELDEESR 1133

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>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +3

Query: 246  LRPWRPAG-RAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRR 422
            L P RP   R V  PAR AP         P RPP    ARSP P   A ++  G G+   
Sbjct: 1100 LEPKRPPPPRPVAPPARPAP---------PQRPPPPSGARSPAP---ARKEFGGVGAPPS 1147

Query: 423  PPLADRRV 446
            P +A R +
Sbjct: 1148 PGVARREI 1155

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>MTCH1_MOUSE (Q791T5) Mitochondrial carrier homolog 1 (Mitochondrial|
           carrier-like protein 1)
          Length = 389

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 10/62 (16%)
 Frame = +3

Query: 228 GSRAPDLRPWRP------AGRAVGSPAR-AAPAGQELLLPAPGR-PPQACRA--RSPRPE 377
           G+  P++ PW P      AG   G+ AR  APAG E    A  R PP A RA  R PRP 
Sbjct: 2   GASDPEVAPWAPGGAAGMAGAGAGAGARGGAPAGVE----ARARDPPPAHRAHPRHPRPA 57

Query: 378 TQ 383
            Q
Sbjct: 58  AQ 59

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>ZAR1_HUMAN (Q86SH2) Zygote arrest 1 (Oocyte-specific maternal effect factor)|
          Length = 424

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
 Frame = +3

Query: 255 WRPAGRAVGSPARAAPAGQEL---LLPAPGRPPQACRARSPRPETQALQQASG*GSKRRP 425
           W         P R A  G+      L +PG+PP A RAR      +A     G  S R P
Sbjct: 253 WEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEG-PSPRSP 311

Query: 426 PLADRRVHWHVVEIR---IRCQAISI--SASKHTCIQGMRKAVLGQ 548
            L   R+ +  +E +     C+  +I   ++   C+QG  K    Q
Sbjct: 312 ELGKERLRFQFLEQKYGYYHCKDCNIRWESAYVWCVQGTNKVYFKQ 357

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>UNG_PRVIF (P52506) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 315

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +3

Query: 264 AGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG 404
           A  A  + A AAPAG       P RPP A R     P   A   A+G
Sbjct: 28  ASNAATAAAAAAPAGAGAGASKPARPPAAARPAKGTPAASAATTATG 74

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>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 261  PAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRP 374
            P GR + +P  AAP G+    P  G PP   R  +P P
Sbjct: 1095 PGGRGMPAPGGAAPRGRGAPPPGAGGPPGGGRGGAPPP 1132

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>ISL2_CHICK (P53410) Insulin gene enhancer protein ISL-2 (Islet-2) (Fragment)|
          Length = 319

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 261 PAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRRPPLADR 440
           P G A   P   AP    L  P PGRPP       PRP++    + +   ++ R  L ++
Sbjct: 110 PDGAAARGPRSPAPPPAHLAEPVPGRPP------GPRPQSHKAAEKT---TRVRTVLNEK 160

Query: 441 RVH 449
           ++H
Sbjct: 161 QLH 163

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>CAPS2_HUMAN (Q86UW7) Calcium-dependent secretion activator 2 (Calcium-dependent|
           activator protein for secretion 2) (CAPS-2)
          Length = 1296

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = +3

Query: 273 AVGSPARAAPAG-QELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRRPPLADRRVH 449
           A GS  RA PA  +E    APGR      ARS  P    L +      ++     +RR+ 
Sbjct: 25  AAGSSQRAPPAPTREGRRDAPGRAGGGGAARSVSPSPSVLSEGRDEPQRQLDDEQERRIR 84

Query: 450 WHVVEIRIRCQAISISASKHT 512
             +    +RC A   +A + T
Sbjct: 85  LQLYVFVVRCIAYPFNAKQPT 105

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>UNG_PRVKA (P52507) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 316

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = +3

Query: 264 AGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRRPP 428
           A  A  + A AAPAG       P RP  A R     P   A   A+G  +   PP
Sbjct: 29  ASNAATAAAAAAPAGAGAGASKPARPSAAARPAKGTPAASAATTATGADASAPPP 83

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>PTPRN_HUMAN (Q16849) Receptor-type tyrosine-protein phosphatase-like N|
           precursor (R-PTP-N) (PTP IA-2) (Islet cell antigen 512)
           (ICA 512) (Islet cell autoantigen 3)
          Length = 979

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 234 RAPDLRPW--RPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRP 374
           R P LRP   RP  R+  +P R  PAG+ LL   P     A + R P+P
Sbjct: 112 RIPRLRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQP 160

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>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 270 RAVG-SPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRR 422
           RAVG  P+ AAPA      P PG PP +  A  PR   +    ++G   +RR
Sbjct: 218 RAVGRGPSSAAPAAPGRTPPPPGPPPLSEAAPKPRAAARTPAASAGRIERRR 269

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>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 261 PAGRAVGSPARAAPAGQELLLPAPGR--PPQACRARSPRPETQALQQASG*GSKRR 422
           P GRA  SPA+A+PAG      +PGR  P QA  AR+        + +SG  S  R
Sbjct: 50  PPGRA--SPAQASPAGTPPGRASPGRASPAQASPARASPALASLSRSSSGRSSSAR 103

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>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2|
          Length = 925

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 261 PAGRAVG-SPARAAPAGQELLLPAPGRPPQACRARSPRP 374
           PA +A   +PAR  PA      PAPG+P      + PRP
Sbjct: 118 PAAQATPEAPARPGPAAARPSAPAPGQPKPPAPGQPPRP 156



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 237 APDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRP 374
           A    P  PA     +   +APA  +   PAPG+PP+      PRP
Sbjct: 119 AAQATPEAPARPGPAAARPSAPAPGQPKPPAPGQPPRPGATPGPRP 164

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>ADRB1_RAT (P18090) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 466

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +3

Query: 246 LRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRRP 425
           LR +R A + V    +   + +   L  P RPP    + SP P   A   A+G  SKRRP
Sbjct: 245 LRVFREAQKQV----KKIDSCERRFLTGPPRPPSPAPSPSPGPPRPADSLANGRSSKRRP 300

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>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 228  GSRAPDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQ 395
            G R P  +     G +V     A PAG + LLP P R  QA RAR P+   +++Q+
Sbjct: 2309 GPREPLAQDSPGRGPSVCLARAARPAGPQRLLPGP-RTGQAPRARLPQKPARSVQR 2363

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>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
            kinase)
          Length = 1321

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
 Frame = +3

Query: 237  APDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRP-----PQACRARSPRPETQALQQ 395
            A DLRP +P GR +G P RA    +    PAP  P       A R  S  P +Q+L +
Sbjct: 1203 AADLRPKQPPGRGLG-PGRAQAGARP---PAPRSPRLPASTSAARNASASPRSQSLSR 1256

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>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein|
          Length = 1729

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
 Frame = +3

Query: 228 GSRAPDLR---PWRPAGRAVGSPARAA-PAGQELLLPAPGRPPQACRARSP---RPETQA 386
           GS   D R   P +P  RA+  PA+ A PA   LL+P   RPP+   A  P   +    A
Sbjct: 28  GSEPGDTRAKPPVKPKPRAL--PAKPALPAKPSLLVPVGPRPPRGPLAELPSARKMNMPA 85

Query: 387 LQQASG*GSKRRPPLADR 440
             Q  G GSKR  P A R
Sbjct: 86  GPQPYG-GSKRPLPFAPR 102

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>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent|
           kinase inhibitor p57) (p57KIP2)
          Length = 316

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
 Frame = +3

Query: 261 PAGRAVGSPARA-----APAGQELLLPAPGRPPQACRARSPRPETQA-----LQQASG*G 410
           P   AV +PA A     APA   +  PAP   P    A +P P   A      +Q +  G
Sbjct: 172 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQG 231

Query: 411 SKRRPPLADR 440
            + + PLAD+
Sbjct: 232 QRGQEPLADQ 241

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>SMCA2_HUMAN (P51531) Probable global transcription activator SNF2L2 (EC|
           3.6.1.-) (ATP-dependent helicase SMARCA2) (SNF2-alpha)
           (SWI/SNF-related matrix associated actin dependent
           regulator of chromatin subfamily A member 2) (hBRM)
          Length = 1586

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 237 APDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG 404
           AP  RP  PA  A   P  AA  G  +  PAPG+P    + +  +     +Q+  G
Sbjct: 278 APGGRP-SPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQG 332

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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
 Frame = +3

Query: 231 SRAPDLRPWRPAGRAVGSPARAAPAGQELL------------LPAPGRPPQACRARSPRP 374
           S AP       A  A  +PA AAPA    L            +PAP  PP+A  +    P
Sbjct: 352 SAAPASAAPASAAPASAAPASAAPASSPPLFIPIPGLGHTPGVPAPSTPPRA--SSGAAP 409

Query: 375 ETQALQQASG*GSKRRPPLADRRV 446
           +T   ++  G  S  + P + RR+
Sbjct: 410 QTPKRKKGLGKDSPHKKPTSGRRL 433

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>NLE1_MOUSE (Q8VEJ4) Notchless homolog 1|
          Length = 484

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = +1

Query: 256 GVLLVELSGHPHVLLLQVRNSSFLLPGGRLRPAE-----QDLQGLKRKLSSKLAA 405
           GVL   L GH H +     ++ + L  G   PAE     QDLQG  ++L  + ++
Sbjct: 276 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASS 330

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>SIPA1_HUMAN (Q96FS4) Signal-induced proliferation-associated protein 1 (Sipa-1)|
           (GTPase-activating protein Spa-1) (p130 SPA-1)
          Length = 1042

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 28/78 (35%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
 Frame = +3

Query: 276 VGSPARA-APAGQELL----LPAPGRPPQACRARSPRPETQALQQASG*GSKRRPPL-AD 437
           VGSP R  APA  + L    L  P RPP       PRP    L ++     + RPP  A 
Sbjct: 8   VGSPRRGMAPASTDDLFARKLRQPARPPLTPHTFEPRPVRGPLLRSGSDAGEARPPTPAS 67

Query: 438 RRVHWHVVEIRIRCQAIS 491
            R   H  E   R  A S
Sbjct: 68  PRARAHSHEEASRPAATS 85

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>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RNA polymerase II subunit 1)
          Length = 1599

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 425 TTGRSASALACGGDQNSMPGHF-HIRL 502
           TT R     +CGGD  S PGHF HI L
Sbjct: 54  TTDRMYLCQSCGGDNFSCPGHFGHIEL 80

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>KLF1_MOUSE (P46099) Krueppel-like factor 1 (Erythroid krueppel-like|
           transcription factor) (EKLF) (Erythroid transcription
           factor)
          Length = 358

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
 Frame = +2

Query: 422 TTTGRSASALACG----GDQNSMPGHFHIRLQTHVHPRNA*SCSWSGCPW 559
           T   +  +A  CG    G   S   H    L+TH   +   +CSW GC W
Sbjct: 266 TLAPKRQAAHTCGHEGCGKSYSKSSHLKAHLRTHTGEKPY-ACSWDGCDW 314

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>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = +3

Query: 261  PAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRRPPLADR 440
            P  R V  PAR AP         P RPP    ARSP P   A ++  G G+   P +  R
Sbjct: 1106 PPPRPVAPPARPAP---------PQRPPPPSGARSPAP---ARKEFGGVGAPPSPGVTRR 1153

Query: 441  RV 446
             +
Sbjct: 1154 EM 1155

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>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +3

Query: 228 GSRAPD-LRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQA--CRARSPRP 374
           G+  P  LRPW P  ++  SP +    G  L  P P  PPQ    +A+SP+P
Sbjct: 399 GASVPSPLRPWGPQTKSAKSPGQ-GQLGPLLGQPQPRPPPQGGPRQAQSPQP 449



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
 Frame = +3

Query: 213 QGQLRGSRAPDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRP--------PQACRARSP 368
           QG  R +++P     +P      S  R +P GQ+ + P  G P        PQ  RA   
Sbjct: 438 QGGPRQAQSP-----QPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRASGG 492

Query: 369 RPETQALQQASG*GSKRRPPLADR 440
               QA +  +   S  RPP+  R
Sbjct: 493 SSPNQASKPTASLSSHTRPPVQGR 516

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>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
 Frame = +3

Query: 213 QGQLRGSRAPDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRP--------PQACRARSP 368
           QG  R +++P     +P      S  R +P GQ+ + P  G P        PQ  RA   
Sbjct: 438 QGGPRQAQSP-----QPPRSRSPSQQRLSPQGQQPVSPQSGSPQQQRSPGSPQLSRASGG 492

Query: 369 RPETQALQQASG*GSKRRPPLADR 440
               QA + ++   S  RPP+  R
Sbjct: 493 SSPNQASKPSASLSSHNRPPVQGR 516

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>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1575

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +3

Query: 237  APDLRPWRPAG-RAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GS 413
            A  L P RP   R V  P R AP         P RPP    ARSP P     ++  G G+
Sbjct: 1100 AQPLEPKRPPPPRPVAPPTRPAP---------PQRPPPPSGARSPAP---TRKEFGGIGA 1147

Query: 414  KRRPPLADRRV 446
               P +A R +
Sbjct: 1148 PPSPGVARREM 1158

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>ADRB1_MOUSE (P34971) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 466

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +3

Query: 246 LRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG*GSKRRP 425
           LR +R A + V    +   + +   L  P RPP    + SP P   A   A+G  SKRRP
Sbjct: 245 LRVFREAQKQV----KKIDSCERRFLGGPARPPSPEPSPSPGPPRPADSLANGRSSKRRP 300

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>LRIG1_MOUSE (P70193) Leucine-rich repeats and immunoglobulin-like domains protein|
            1 precursor (LIG-1)
          Length = 1091

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +1

Query: 286  PHVLLLQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGE 444
            PH       + S  L GG L P+  D   +   L +K A+ D NGD  W + +
Sbjct: 969  PHHPYSGTADGSHTLSGGSLYPSNHDR--ILPSLKNKAASADGNGDSSWTLAK 1019

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>UL51_PRVKA (Q85227) Protein UL51|
          Length = 236

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 264 AGRAVGSPARAAPAGQELLLPAPGRP-PQACRAR--SPRPETQALQQASG 404
           A R   +P RAAPAG  L LP P +P P+A  AR   P P  +A +   G
Sbjct: 155 ARRRQPAPVRAAPAG--LGLPVPAQPAPRATAARPAPPPPPEEAGEDEEG 202

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>PTPRN_BOVIN (P56722) Receptor-type tyrosine-protein phosphatase-like N|
           precursor (R-PTP-N) (Islet cell autoantigen 512)
           (ICA512)
          Length = 979

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +3

Query: 234 RAPDLRPWRPAGRAVGS--PARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG 404
           R P LRP  P  R      P R  PAG+ LL   P     A + R PRP     +  +G
Sbjct: 112 RIPRLRPPEPHPRDRSGLVPRRPGPAGELLLQGIPTGSAPALQHRLPRPSVGGGRAGAG 170

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 11/84 (13%)
 Frame = +3

Query: 225 RGSRAPDL----RPWRPAGRAVGSPARAAPAGQELLLPAP-------GRPPQACRARSPR 371
           R  R+P L     P  P  R   SP R +P  Q    P+P         PP   R  SP 
Sbjct: 562 RRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPS 621

Query: 372 PETQALQQASG*GSKRRPPLADRR 443
           P+++     S    +R  P A RR
Sbjct: 622 PQSKRRVSHSPPPKQRSSPAAKRR 645

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>NIFA_AZOCA (P09133) Nif-specific regulatory protein|
          Length = 615

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 246 LRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPR-PETQALQQA 398
           L P  PA  A  +PA A+PA     LP      +AC A  PR  E + L QA
Sbjct: 528 LTPLSPAPLATAAPAAASPAPAADSLPVTCPGTEACPAVPPRQSEKEQLLQA 579

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>NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell|
           transcription factor NFAT1) (NFAT pre-existing subunit)
           (NF-ATp)
          Length = 925

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +3

Query: 258 RPAGRAVGSPARAAPAGQELLLPAP-GRPPQACRARSPRPETQALQQASG*GSKRRPPLA 434
           RPA R+    A+   +  E L+  P G  PQ  R+ SP+P +    Q  G      PP+A
Sbjct: 240 RPASRSSSPGAKRRHSCAEALVALPPGASPQRSRSPSPQPSSHVAPQDHG-SPAGYPPVA 298

Query: 435 DRRV 446
              V
Sbjct: 299 GSAV 302

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>TREA_EMENI (P78617) Acid trehalase precursor (EC 3.2.1.28)|
           (Alpha,alpha-trehalase) (Alpha,alpha-trehalose
           glucohydrolase)
          Length = 1054

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 485 GLASNSDLHHMPMHSPI 435
           GLA N+ LHH+P H P+
Sbjct: 834 GLADNATLHHLPPHGPL 850

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>NLE1_PONPY (Q5RFF8) Notchless homolog 1|
          Length = 484

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +1

Query: 256 GVLLVELSGHPHVLLLQVRNSSFLLPGGRLRPAE-----QDLQGLKRKLSSK 396
           GVL   L GH H +     ++ + L  G   PAE     QDLQG  ++L  +
Sbjct: 276 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKER 327

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>NLE1_HUMAN (Q9NVX2) Notchless homolog 1|
          Length = 484

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +1

Query: 256 GVLLVELSGHPHVLLLQVRNSSFLLPGGRLRPAE-----QDLQGLKRKLSSK 396
           GVL   L GH H +     ++ + L  G   PAE     QDLQG  ++L  +
Sbjct: 276 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKER 327

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>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +3

Query: 243 DLRP---WRPAGRAVGSPA--RAAPAGQELLLPAPGRPPQACRARSPRPETQALQQASG 404
           D+RP   W P  + +  P   R  P  +       GRPP++ + R+P   TQ+ Q +SG
Sbjct: 277 DVRPPLDWGPQRQTLSRPPIPRRGPFSEA----GGGRPPRSPQLRTPEHRTQSTQVSSG 331

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>MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (ATP-dependent|
            RNA helicase mle) (Protein male-less) (Protein no action
            potential)
          Length = 1293

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 554  GNLTKNSFTHSLDARVFGGGYGN 486
            G  T +SF    + R FGGGYGN
Sbjct: 1185 GRFTNSSFGRRGNGRTFGGGYGN 1207

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>NAGPA_HUMAN (Q9UK23) N-acetylglucosamine-1-phosphodiester|
           alpha-N-acetylglucosaminidase precursor (EC 3.1.4.45)
           (Phosphodiester alpha-GlcNAcase) (Mannose
           6-phosphate-uncovering enzyme)
          Length = 515

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = -3

Query: 441 ADLPVVVAVSILSR*LAGELAFQALEILLGRPEAAAREQEGG 316
           A+L ++++ +  +R L G+ A+  L+ + G P AA +EQ GG
Sbjct: 467 ANLSLLLSRAERNRRLHGDYAYHPLQEMNGEPLAAEKEQPGG 508

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>FOXO3_HUMAN (O43524) Forkhead box protein O3A (Forkhead in|
           rhabdomyosarcoma-like 1) (AF6q21 protein)
          Length = 673

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +1

Query: 34  APACIGERVDMGLEMAPVATESSPEQQPEVAIYPLCRYYFGAKDARPCAGETAAD 198
           APA       + +E+ P   E  P+ +P    +PL R    A  A+P +GETAAD
Sbjct: 4   APASPAPLSPLEVELDP---EFEPQSRPRSCTWPLQRPELQASPAKP-SGETAAD 54

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>DRD4_HUMAN (P21917) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)|
           dopamine receptor)
          Length = 467

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = +3

Query: 216 GQLRGSRAPDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPE 377
           G  RG   PD  P  P     G P    P G +   PAPG PP  C +    P+
Sbjct: 316 GLPRGPCGPDCAPPAP-----GLPQD--PCGPDCAPPAPGLPPDPCGSNCAPPD 362

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>LYOX_CHICK (Q05063) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl|
           oxidase)
          Length = 420

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 255 WRPAGRAVGSPARAAPAGQELLLPAPGRPPQACRARSPRPETQALQQAS---G*GSKRRP 425
           ++P  R  G+   ++P    LLL   G  P+A  A + RP+ +   QA       S RR 
Sbjct: 56  YQPPRRRQGAEPASSPV---LLLRGNGSVPRAAAAAAARPQPEPQPQAQPQPRPRSSRRQ 112

Query: 426 PLADRRVHW 452
           PL  R  HW
Sbjct: 113 PLGRR--HW 119

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>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 25.0 bits (53), Expect(2) = 9.4
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 16   RAPNPTAPACIGE---RVDMGLEMAPVATESSPEQQPE 120
            R+P+ ++P  +G+    + +GL   P++T  +P +QPE
Sbjct: 966  RSPS-SSPGQLGQPPGELSLGLATGPLSTPETPPRQPE 1002



 Score = 22.3 bits (46), Expect(2) = 9.4
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 225  RGSRAPDLRPWRPAGRAVGSPARAAPAGQELLLPAPGRPP 344
            RG  +P      P      +P RA+ +   LLLP    PP
Sbjct: 1022 RGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPP 1061


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,593,767
Number of Sequences: 219361
Number of extensions: 1544459
Number of successful extensions: 6578
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 5944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6533
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result