>OLEE1_BETVE (O49813) Olee1-like protein precursor|
          Length = 166

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 31/101 (30%), Positives = 47/101 (46%)
 Frame = +2

Query: 164 ARKSSNITVVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTT 343
           A   S   V G VYCD C     +K S ++KGA+V ++C  +   +     +   ++  T
Sbjct: 21  AYSESRFFVEGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGT-----LIYSSDSET 75

Query: 344 DQHGVYKLDVPPVDGFECREGHELRSACRATLVRSSSAACN 466
           D+ G Y++   PVDG      HE    C   L +SS   C+
Sbjct: 76  DKSGTYRI---PVDG-----DHE-EEICEIALKKSSDPDCS 107

>LAT52_LYCES (P13447) Anther-specific protein LAT52 precursor|
          Length = 161

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 33/92 (35%), Positives = 40/92 (43%)
 Frame = +2

Query: 188 VVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQHGVYKL 367
           V G VYCD C     +K S  L+GA V +QC    N S   E  S+E    TD+ G YKL
Sbjct: 29  VEGKVYCDTCRVQFETKLSENLEGATVKLQCR---NISTEAETFSVEG--VTDKDGKYKL 83

Query: 368 DVPPVDGFECREGHELRSACRATLVRSSSAAC 463
            V          G      C  T+V+S    C
Sbjct: 84  TV---------NGDHENDICEVTVVKSPREDC 106

>CHE1_CHEAL (Q8LGR0) Pollen allergen Che a 1 precursor|
          Length = 168

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
 Frame = +2

Query: 146 LGGGAEARKSSNITVVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISL 325
           L G A A ++ +  V G VYCD C     ++ S  ++GA V ++C    N +A  +  + 
Sbjct: 19  LAGVANAAEN-HFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECR---NITAGTQ--TF 72

Query: 326 EAELTTDQHGVYKLDVPPVDG-FECREGHELRSACRATLVRSSSAACNVPG---LRGSTQ 493
           +AE  TD+ G Y +   PV+G FE          C   LV+S ++ C+          + 
Sbjct: 73  KAEAVTDKVGQYSI---PVNGDFE-------DDICEIELVKSPNSECSEVSHDVYAKQSA 122

Query: 494 HIALRGSRGAAACFLNPHALNF 559
            ++L  + G A+   + +AL F
Sbjct: 123 KVSLTSNNGEASDIRSANALGF 144

>LOLB_LOLPR (Q7M1X5) Major pollen allergen Lol p 11 (Lol p XI)|
          Length = 134

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 28/99 (28%), Positives = 42/99 (42%)
 Frame = +2

Query: 170 KSSNITVVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQ 349
           K     V G VYCD C     +  S  ++GA V + C           E  L+AE TTD+
Sbjct: 2   KGPGFVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCR-----PFDGGESKLKAEATTDK 56

Query: 350 HGVYKLDVPPVDGFECREGHELRSACRATLVRSSSAACN 466
            G YK+++         + H+    C   L +S   +C+
Sbjct: 57  DGWYKIEID--------QDHQ-EEICEVVLAKSPDKSCS 86

>PHLB_PHLPR (Q8H6L7) Pollen allergen Phl p 11|
          Length = 143

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = +2

Query: 170 KSSNITVVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQ 349
           K     V G VYCD C     +  S  ++GA V + C    N      E  L+AE TTD 
Sbjct: 2   KGPGFVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCR-PFNGG----ESKLKAEATTDG 56

Query: 350 HGVYKLDVPPVDGFECREGHELRSACRATLVRSSSAACN 466
            G YK+++         + H+    C   L +S    C+
Sbjct: 57  LGWYKIEID--------QDHQ-EEICEVVLAKSPDTTCS 86

>ALL1_OLEEU (P19963) Major pollen allergen (Allergen Ole e 1) (Ole e I)|
          Length = 145

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 27/97 (27%), Positives = 37/97 (38%)
 Frame = +2

Query: 176 SNITVVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQHG 355
           S   + G VYCD C     ++ S F+ GA + +QC  K N      E+       T   G
Sbjct: 9   SQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGY-----TRAEG 63

Query: 356 VYKLDVPPVDGFECREGHELRSACRATLVRSSSAACN 466
           +Y + V         E       C  TL+ S    CN
Sbjct: 64  LYSMLV---------ERDHKNEFCEITLISSGRKDCN 91

>PLAL1_PLALA (P82242) Major pollen allergen Pla l 1|
          Length = 131

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 48/139 (34%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
 Frame = +2

Query: 188 VVGSVYCDAC-SNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQHGVYK 364
           V G VYC+ C S N  ++ S  + GA+V + C  K +S      I  E    TDQ GVY+
Sbjct: 11  VEGEVYCNVCHSRNLINELSERMAGAQVQLDC--KDDSKKVIYSIGGE----TDQDGVYR 64

Query: 365 LDVPPVDGFECREGHELRSACRATLVRSSSAACN-VPGL-RGSTQHIALRGSRGAAACFL 538
           L   PV G+     HE    C   LV+SS   C+ +P L +G+ Q   +  S+       
Sbjct: 65  L---PVVGY-----HE---DCEIKLVKSSRPDCSEIPKLAKGTIQTSKVDLSKNTTITEK 113

Query: 539 NPHA--LNFRPAKRDRTLC 589
             H   L+FR AK D   C
Sbjct: 114 TRHVKPLSFR-AKTDAPGC 131

>LIGV1_LIGVU (O82015) Major pollen allergen Lig v 1|
          Length = 145

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 26/97 (26%), Positives = 37/97 (38%)
 Frame = +2

Query: 176 SNITVVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQHG 355
           S   + G VYCD C     ++ S F+ GA V +QC    N      E+       T   G
Sbjct: 9   SQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGY-----TKAEG 63

Query: 356 VYKLDVPPVDGFECREGHELRSACRATLVRSSSAACN 466
           +Y + +         E       C  TL+ SS   C+
Sbjct: 64  LYNMLI---------ERDHKNEFCEITLISSSRKDCD 91

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 457 RLQRPGPPRLHAAHRAPGLPRRRGVLPQPSRAQLPPRQAGP 579
           R + P PP      R+P LPRRR   P P R    PR+  P
Sbjct: 551 RRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSP 591

>REM2_HUMAN (Q8IYK8) GTP-binding protein REM 2 (Rad and Gem-like GTP-binding|
           protein 2)
          Length = 330

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 20/43 (46%), Positives = 23/43 (53%)
 Frame = +1

Query: 445 ELLGRLQRPGPPRLHAAHRAPGLPRRRGVLPQPSRAQLPPRQA 573
           +LL  L R G P       APG PRRRG +P P + QL   QA
Sbjct: 36  KLLAELDRSGLPS------APGAPRRRGSMPVPYKHQLRRAQA 72

>PSC13_MAIZE (P33050) Pollen-specific protein C13 precursor|
          Length = 170

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 22/93 (23%), Positives = 38/93 (40%)
 Frame = +2

Query: 188 VVGSVYCDACSNNTFSKHSFFLKGARVLIQCNFKVNSSAAPEEISLEAELTTDQHGVYKL 367
           + G VYCD C     +  + ++ GA+V ++C           ++    +  TD  G Y +
Sbjct: 37  IQGRVYCDTCRAGFVTNVTEYIAGAKVRLEC-----KHFGTGKLERAIDGVTDATGTYTI 91

Query: 368 DVPPVDGFECREGHELRSACRATLVRSSSAACN 466
                   E ++ HE    C+  LV S    C+
Sbjct: 92  --------ELKDSHE-EDICQVVLVASPRKDCD 115

>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)|
          Length = 309

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +1

Query: 469 PGPPRLHAAHRAPGLPRRRGVLPQPSRA---QLPPRQAGPHALP 591
           P PP LHAAH  P LP      P+P R    Q P    GP   P
Sbjct: 52  PPPPHLHAAHPGPALPE---YFPRPRREPGYQAPAAPPGPPGPP 92

>FUS_CDVO (P12569) Fusion glycoprotein F0 precursor [Contains: Fusion|
           glycoprotein F2; Fusion glycoprotein F1]
          Length = 662

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = -1

Query: 531 HAAAPREPRSAMCCVEPRRPGTLQAAEELRTSVARHADRSSWPSRHSKPSTGGTSSLYT 355
           H   P+  ++     + R P      EE RTS ARH+  S+  S H  P T      YT
Sbjct: 2   HRGIPKSSKTQTHTQQDRPPQPSTELEETRTSRARHSTTSAQRSTHYDPRTSDRPVSYT 60

>SLT11_EMENI (Q5AX35) Pre-mRNA-splicing factor slt11|
          Length = 385

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = +1

Query: 469 PGPPRLHAAHRAPGLPRR-----RGVLPQPSRAQLPPRQA 573
           PGP R   + R   LP R     RG  P P  AQLPP QA
Sbjct: 187 PGPVRTSESRRGTPLPGRGRGGVRGGRPFPGTAQLPPSQA 226

>CSP_PLAYO (P06914) Circumsporozoite protein precursor (CS)|
          Length = 367

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 442 PELLGRLQRPGPPRLHAAHRAPGLPRRRGVLPQPSRAQLPPRQ 570
           P+  G  Q PG P+   A + PG P+  G    P   Q PP+Q
Sbjct: 192 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQEPPQQ 234

>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)|
          Length = 347

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 460 LQRPGPPRLHAAHRAPGLPRRRGVLPQPS--RAQLPPR 567
           L RPGPP L AA   P  P  RG+ P P      LPPR
Sbjct: 117 LHRPGPPPLRAAPLLP--PGARGLPPPPPPLPPPLPPR 152

>NUCG_HUMAN (Q14249) Endonuclease G, mitochondrial precursor (EC 3.1.30.-)|
           (Endo G)
          Length = 297

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 481 RLHAAHRAPGLPRRRGVLPQPSRAQLPPRQAGP 579
           R   A  APGL  R  VLP  + A+LPP   GP
Sbjct: 26  RREDARAAPGLLGRLPVLPVAAAAELPPVPGGP 58

>Y369_TREPA (O83384) Hypothetical protein TP0369 precursor|
          Length = 516

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 457 RLQRPGPPRLHAAHRAPGLPRRRGVLPQPSRAQLPPRQAGPHALP 591
           R  RP PP +  +      P++R V P P  A  PPR+A   A P
Sbjct: 134 RPHRPSPPPVSPS---ASKPKQRAVPPSPPPASEPPREAEVQAEP 175

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 442 PELLGRLQRPGPPRLHAAHRAPGLPRRRG---VLPQPSRAQLPPRQAGPHALP 591
           P+LL   +RP  PR       P  P  RG   VLPQP   ++ P   GP   P
Sbjct: 808 PQLLPPTERPMSPR-----SLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPP 855

>PTN5_MOUSE (P54830) Tyrosine-protein phosphatase non-receptor type 5 (EC|
           3.1.3.48) (Protein-tyrosine phosphatase
           striatum-enriched) (STEP) (Neural-specific
           protein-tyrosine phosphatase)
          Length = 541

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 8/48 (16%)
 Frame = +1

Query: 469 PGPPRLHAAHRAPGLPRRRGVLPQP--------SRAQLPPRQAGPHAL 588
           P P  + A   A GLP ++  +P P           +LPP+ AG H+L
Sbjct: 11  PQPVEMEAPDEAEGLPSKQKEMPPPPPPSPPSEPAQKLPPQGAGSHSL 58

>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 17/41 (41%), Positives = 17/41 (41%)
 Frame = +1

Query: 469 PGPPRLHAAHRAPGLPRRRGVLPQPSRAQLPPRQAGPHALP 591
           PGPP L     APGLP              PP  AGPH  P
Sbjct: 419 PGPPGLDGQPGAPGLPG-------------PPGPAGPHIPP 446

>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor|
          Length = 1691

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +1

Query: 442 PELLGRLQRPGPPRLHAAHRAPGLPRRRGVLPQPSRAQLPPRQAGP 579
           P L G    PGPP L   +  PGLP  RG+     +  LP +Q  P
Sbjct: 604 PGLPGEKGHPGPPGL-PGNGLPGLPGPRGLPGDKGKDGLPGQQGLP 648


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.137    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,424,157
Number of Sequences: 219361
Number of extensions: 990253
Number of successful extensions: 5241
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5197
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)