ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytopl... 30 4.6

>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 396  HHMAPSPMEGAPGNSPWRSPMQFQTPMSG 482
            H +A SP+ G P  SP   PM +Q+P SG
Sbjct: 932  HPLASSPLSGPP--SPQLQPMPYQSPSSG 958


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,132,970
Number of Sequences: 219361
Number of extensions: 853610
Number of successful extensions: 2801
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2801
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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