ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1FBX17_RAT (Q6AY27) F-box only protein 17 38 0.017
2FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26) 38 0.022
3CSP_PLACL (P08675) Circumsporozoite protein precursor (CS) 35 0.19
4VE2_BPV3 (Q8BDD6) Regulatory protein E2 34 0.24
5FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci... 34 0.32
6FBX6_HUMAN (Q9NRD1) F-box only protein 6 (F-box/G-domain protein 2) 33 0.42
7FBX44_MOUSE (Q8BK26) F-box only protein 44 (F-box only protein 6a) 33 0.42
8FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b) 33 0.54
9FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26) 33 0.54
10IF2_PROAC (Q6A7M5) Translation initiation factor IF-2 32 0.93
11FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30)... 32 0.93
12LEUK_HUMAN (P16150) Leukosialin precursor (Leucocyte sialoglycop... 32 1.2
13FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b) (... 32 1.2
14IF2_CORGL (Q8NP40) Translation initiation factor IF-2 31 2.1
15ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII... 31 2.1
16IF2_PASMU (P57873) Translation initiation factor IF-2 31 2.1
17FBX27_MACFA (Q9N0C8) F-box only protein 27 30 3.5
18KR1_HHV2H (P13287) Serine/threonine-protein kinase (EC 2.7.11.1) 30 3.5
19IE68_SHV21 (Q01042) Immediate-early protein 30 3.5
20FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3 30 3.5
21H3_ACRFO (P22843) Histone H3 30 4.6
22FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leuc... 30 4.6
23NEST_RAT (P21263) Nestin 30 4.6
24FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain prote... 30 4.6
25FBX2_MOUSE (Q80UW2) F-box only protein 2 30 4.6
26GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1) 30 6.0
27H3_VOLCA (P08437) Histone H3 30 6.0
28H3_GRIJA (Q7XYZ0) Histone H3 30 6.0
29H3_CHLRE (P50564) Histone H3 30 6.0
30H3_CAEEL (P08898) Histone H3 30 6.0
31H31_SCHPO (P09988) Histone H3.1/H3.2 30 6.0
32MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor (... 30 6.0
33FRS3_HUMAN (O43559) Fibroblast growth factor receptor substrate ... 29 7.9
34H3_WHEAT (P68428) Histone H3 29 7.9
35H3_URECA (P84239) Histone H3 29 7.9
36H3_TIGCA (P84237) Histone H3 29 7.9
37H3_STRPU (P06352) Histone H3, embryonic 29 7.9
38H3_STRDR (P69079) Histone H3, embryonic 29 7.9
39H3_SOLST (P69078) Histone H3, embryonic 29 7.9
40H3_PYCHE (P69077) Histone H3, embryonic 29 7.9
41H3_PSAMI (P69076) Histone H3, embryonic 29 7.9
42H3_PORAF (P84232) Histone H3 29 7.9
43H3_PLADU (P84235) Histone H3 29 7.9
44H3_PISOC (P69075) Histone H3, embryonic 29 7.9
45H3_PISBR (P69074) Histone H3, embryonic 29 7.9
46H3_PETCR (P69248) Histone H3 29 7.9
47H3_PEA (P68427) Histone H3 29 7.9
48H3_PARLI (P69073) Histone H3, embryonic 29 7.9
49H3_ONOVI (P68430) Histone H3 29 7.9
50H3_ONCMY (P84234) Histone H3 29 7.9
51H3_MORAP (Q9HDN1) Histone H3 29 7.9
52H3_LYTPI (P69072) Histone H3, embryonic 29 7.9
53H3_ICTBU (P84231) Histone H3 29 7.9
54H3_EUPES (Q71T45) Histone H3 29 7.9
55H3_ENCAL (P08903) Histone H3 29 7.9
56H3_DROME (P02299) Histone H3 29 7.9
57H3_DROHY (P84236) Histone H3 29 7.9
58H3_DERIM (P69071) Histone H3, embryonic 29 7.9
59H3_CHITH (P84238) Histone H3 (H3) 29 7.9
60H3_CAIMO (P84230) Histone H3 29 7.9
61H3_BRANA (Q6LCK1) Histone H3 29 7.9
62H3_ASPOF (Q6LBE3) Histone H3 29 7.9
63H3_ARATH (P59226) Histone H3 29 7.9
64H3T_HUMAN (Q16695) Histone H3.4 (H3t) (H3/t) (H3/g) 29 7.9
65H32_ORYSA (P08860) Histone H3 29 7.9
66H32_MOUSE (P84228) Histone H3.2 29 7.9
67H32_MAIZE (Q53X03) Histone H3 type 2 29 7.9
68H32_BOVIN (P84227) Histone H3.2 29 7.9
69H31_XENLA (P84233) Histone H3.1 29 7.9
70H31_ORYSA (P69247) Histone H3 29 7.9
71H31_MOUSE (P68433) Histone H3.1 29 7.9
72H31_MEDSA (P68429) Histone H3.1 (Major histone H3) 29 7.9
73H31_MAIZE (P69246) Histone H3 type 1 29 7.9
74H31_HUMAN (P68431) Histone H3.1 (H3/a) (H3/b) (H3/c) (H3/d) (H3/... 29 7.9
75H31_CHICK (P84229) Histone H3 (Histone H3 class I) 29 7.9
76H31_BOVIN (P68432) Histone H3.1 29 7.9
77RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-ri... 29 7.9
78FBX27_MOUSE (Q6DIA9) F-box only protein 27 29 7.9
79RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1 29 7.9
80RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1 29 7.9
81RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1 29 7.9
82RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1 29 7.9
83RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain... 29 7.9
84CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21 29 7.9
85PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-c... 29 7.9 
>FBX17_RAT (Q6AY27) F-box only protein 17|
          Length = 250

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +1

Query: 7   MRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 150
           M + +  +L  LP  ++L++L+ VP  A + RC    + WRDLV  PS
Sbjct: 10  MTEAQHMALAELPPELLLQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57
to top
>FBX17_MOUSE (Q9QZM8) F-box only protein 17 (F-box only protein 26)|
          Length = 286

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +1

Query: 4   EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 150
           +M +    +L +LP  +++++L+ VP  A + RC    + WRDLV  PS
Sbjct: 9   QMTEARRLALTKLPPELLVQVLSHVPPRALVTRCRPVCRAWRDLVDGPS 57
to top
>CSP_PLACL (P08675) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 42/130 (32%), Positives = 49/130 (37%), Gaps = 4/130 (3%)
 Frame = -1

Query: 456 ADGQAVDGGPRFRLCLRLRLGAEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTG--A 283
           ADG   + G R     R   GA A +   A  G R     + A GAR E   +   G  A
Sbjct: 98  ADGARAEDGARAEDGARAEDGARAEDGARAADGARAADGARAADGARAEDGARAEDGARA 157

Query: 282 EDRPRRADEAGARRPFPALATLPAEEAD--EGGXXXXXXXXXXAQEGRLGDEVAPALARG 109
           ED  R AD  GAR    A A   A  AD               A +G   ++ APA  R 
Sbjct: 158 EDGARAAD--GARAADGARAADGARAADGARAADGARAADGARAADGARAEDGAPAGNR- 214

Query: 108 RAAEEVGDAG 79
               E G AG
Sbjct: 215 ----EGGQAG 220



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 42/143 (29%), Positives = 50/143 (34%), Gaps = 4/143 (2%)
 Frame = -1

Query: 492 RGEHVARARE*VADGQAVDGGPRFRLCLRLRLGAEAHEERAAVRGERHDAVVQEASGARD 313
           R E  ARA    ADG     G R     R   GA A +   A  G R     + A GAR 
Sbjct: 120 RAEDGARA----ADGARAADGARAADGARAEDGARAEDGARAEDGARAADGARAADGARA 175

Query: 312 EGAKQGTTGAE--DRPRRADEAGARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLG 139
               +   GA   D  R AD A A     A    PA    EGG           Q G  G
Sbjct: 176 ADGARAADGARAADGARAADGARAADGARAEDGAPAGNR-EGGQAGAGGNQAGGQAGAGG 234

Query: 138 DEVAPALARG--RAAEEVGDAGH 76
           ++       G  +A  + G  G+
Sbjct: 235 NQAGGQAGAGGNQAGGQAGAGGN 257
to top
>VE2_BPV3 (Q8BDD6) Regulatory protein E2|
          Length = 414

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = -2

Query: 503 SQRSGGSTWHAPESRLQTARRS-TAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRP 327
           ++R G  T   P  +  + RRS ++G D         +P  +RS  R  +   + S  RP
Sbjct: 208 NRRRGPQTRGHPRHKSASFRRSASSGSDTRDSRGRSRSPSSSRSRSRSRSRSPSGSHSRP 267

Query: 326 AAPGTKEPSRGRP 288
            AP   +   GRP
Sbjct: 268 RAPHVPDQETGRP 280
to top
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +1

Query: 19  EAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLR 159
           E  S+ RLP+H +++I + +P    L RCA   +RW +L  +P   R
Sbjct: 110 EQASIDRLPDHSMVQIFSFLP-TNQLCRCARVCRRWYNLAWDPRLWR 155
to top
>FBX6_HUMAN (Q9NRD1) F-box only protein 6 (F-box/G-domain protein 2)|
          Length = 293

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 28  SLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 165
           S+  LPE+++LE+   VP    L  C      WRDL+   +  +R+
Sbjct: 12  SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRK 57
to top
>FBX44_MOUSE (Q8BK26) F-box only protein 44 (F-box only protein 6a)|
          Length = 255

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 40  LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 165
           LPE+++LE+   +P    L RC      WRDL+   +  +R+
Sbjct: 9   LPENILLELFIHIPARQLLLRCRPVCSLWRDLIDLVTLWKRK 50
to top
>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)|
          Length = 295

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 40  LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 165
           LPE+++LE+   +P    L  C    + WRDL+   S  +R+
Sbjct: 7   LPENILLELFIHIPAPQLLRNCRLVCRLWRDLIDVVSLWKRK 48
to top
>FBX17_HUMAN (Q96EF6) F-box only protein 17 (F-box only protein 26)|
          Length = 278

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 10  RDPEAPSLV--RLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPS 150
           R P  PSL    LP  +++++L+ VP  + + RC    + WRD+V  P+
Sbjct: 9   RLPADPSLALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPT 57
to top
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2|
          Length = 964

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = -2

Query: 392 PKRTRSAPRCEASGTTRSSKRPAAPGTKE------PSRGRPGPRTDHGART 258
           PK    AP+ +    ++S K  A PG +       PS  RPGPR   G RT
Sbjct: 157 PKPHAPAPKPKPGAPSKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRT 207
to top
>FBX44_HUMAN (Q9H4M3) F-box only protein 44 (F-box protein FBX30)|
           (F-box/G-domain protein 3)
          Length = 255

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 40  LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 165
           LPE+++LE+   VP    L  C      WRDL+   +  +R+
Sbjct: 9   LPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRK 50
to top
>LEUK_HUMAN (P16150) Leukosialin precursor (Leucocyte sialoglycoprotein)|
           (Sialophorin) (Galactoglycoprotein) (GALGP) (CD43
           antigen)
          Length = 400

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
 Frame = -2

Query: 515 SKNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSS 336
           S   S R+ G+      S L+T+R  T+GP            K T   P   A+ +  +S
Sbjct: 139 SPETSSRTSGAPVTTAASSLETSR-GTSGPPLTMATVSLETSKGTSGPPVTMATDSLETS 197

Query: 335 KRPAAP------GTKEPSRGRPGPR 279
                P      G+ EPS G  GP+
Sbjct: 198 TGTTGPPVTMTTGSLEPSSGASGPQ 222
to top
>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)|
           (F-box/G-domain protein 2)
          Length = 284

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 40  LPEHVVLEILARVPGVADLFRCAAARKRWRDLVTEPSFLRRR 165
           LPE+++LE+   VP    L  C      WRDL+   +  +R+
Sbjct: 7   LPENILLELFTHVPAPQLLRNCRLVCSLWRDLIDVMTLWKRK 48
to top
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 37/166 (22%), Positives = 58/166 (34%), Gaps = 18/166 (10%)
 Frame = -1

Query: 453 DGQAVDGGPRFRLCLRLRLGAEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDR 274
           DGQ   GG R               + A   G R     +   G+R +G      GA+  
Sbjct: 258 DGQGNRGGQR---------------QGAGAGGPRPQGGPRPQGGSRPQGGS--AQGAQGA 300

Query: 273 PRRADEAGARRPFPAL-----ATLPAEEADEGGXXXXX-------------XXXXXAQEG 148
           P +  + G RRP PA+       +PA+   +GG                        + G
Sbjct: 301 PSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQAGGGAGGGFNRGGGTGGGAGRGG 360

Query: 147 RLGDEVAPALARGRAAEEVGDAGHARQDLQHDMLRQPHQRGRFRIP 10
           R G   A A  R   A   G     ++  +++ ++ P+  G  R+P
Sbjct: 361 RRGG-TAGAFGRPGGAPRRGRKSKRQKRNEYESMQAPNVIGGVRLP 405
to top
>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2|
           (Elongin A2) (EloA2) (Transcription elongation factor B
           polypeptide 3B)
          Length = 753

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
 Frame = -2

Query: 476 HAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEA--SGTTRSS----------- 336
           H+PE R +TARR+  G            P+  R  PR     SG  R+S           
Sbjct: 124 HSPEHR-RTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGRYRASPTRTAPLRMPE 182

Query: 335 -KRPAAPGTKEPSRG 294
              PAAPG K+P RG
Sbjct: 183 GPEPAAPG-KQPGRG 196
to top
>IF2_PASMU (P57873) Translation initiation factor IF-2|
          Length = 833

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -1

Query: 381 EERAAVRGER-HDAVVQEASGARDEGAKQGTTGAEDRPRRADEAGARRPFPALATLPAEE 205
           EE+A +  E+   A  +EA  A+   A       E   RRA+EA  RR    LA   AEE
Sbjct: 79  EEKARLEAEKAKQAKAEEAKKAQAVSAPTKAVDVEKEKRRAEEAELRRKADELARQKAEE 138
to top
>FBX27_MACFA (Q9N0C8) F-box only protein 27|
          Length = 280

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 4   EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 138
           E    EA  L +LP  ++L +L+ VP    L RC    + WR LV
Sbjct: 19  ESEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 63
to top
>KR1_HHV2H (P13287) Serine/threonine-protein kinase (EC 2.7.11.1)|
          Length = 481

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = +1

Query: 277 VLGPGRPLLGSFVPGAAGLLDDRVVPLASHRGALLVRFGXXXXXXXXX-----XSGPAVD 441
           V G G  + G+ +PG+ G + D   P   HR  ++V+ G               + PA+ 
Sbjct: 186 VTGLGFAIHGALIPGSEGCVFDSSHPNYPHR--VIVKAGWYASTSHEARLLRRLNHPAIL 243

Query: 442 RLAVCNLLSG-ACHVLPPLRCDWF 510
            L   +++SG  C VLP   CD +
Sbjct: 244 PLLDLHVVSGVTCLVLPKYHCDLY 267
to top
>IE68_SHV21 (Q01042) Immediate-early protein|
          Length = 407

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 33/134 (24%), Positives = 47/134 (35%), Gaps = 12/134 (8%)
 Frame = -1

Query: 393 AEAHEERAAVRGERHDAVVQEASGARDEGAKQGTTGAEDRP------------RRADEAG 250
           AEA EE A    E  +A  +EA  A +E A++    AE+                A+E  
Sbjct: 126 AEAEEEEA----EEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEA 181

Query: 249 ARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDAGHAR 70
                 A     AEEA+E             +E    +E   A     A EE  +A    
Sbjct: 182 EEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEA---EEAEEEAEEAEEEE 238

Query: 69  QDLQHDMLRQPHQR 28
           ++      R PH +
Sbjct: 239 EEAGPSTPRLPHYK 252
to top
>FGD3_MOUSE (O88842) FYVE, RhoGEF and PH domain-containing protein 3|
          Length = 733

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
 Frame = -1

Query: 405 LRLGAEAHEERAAVRGERHDAVVQEASGA-----RDEGAKQGTTGAEDRPRRADEAGARR 241
           L +G  AH    +      D+  +E SGA     RD G    ++         +E+    
Sbjct: 36  LPIGPGAHRGAHSSSAPAGDSSTREPSGAMKIPNRDSGIDSPSSSVASENFPCEESSEGS 95

Query: 240 PFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEV 91
           P PA+  LP+E A +             ++  +G+E  P +   R  E+V
Sbjct: 96  PSPAILGLPSETASD--SRVPQDNPQEEEDSGVGEEPDPKVTLFRPQEDV 143
to top
>H3_ACRFO (P22843) Histone H3|
          Length = 135

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +    +   PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAAAKSAPATGGVKKPHRYRPG 44
to top
>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +1

Query: 28  SLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVTE 144
           +LV LP+ V+LEI + +P V D  R +    RW+ LV +
Sbjct: 3   TLVELPDSVLLEIFSYLP-VRDRIRISRVCHRWKRLVDD 40
to top
>NEST_RAT (P21263) Nestin|
          Length = 1805

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 18/120 (15%)
 Frame = -1

Query: 387  AHEERAAVRGERHDAVVQEA-SGAR--DEGAKQGTTGAEDRPRRADEA------------ 253
            A EE +   GE  DA  + A SGA+    GA  G    +D  +R D              
Sbjct: 1602 ADEEESGEEGEEEDADEEGAESGAQWWGSGASGGGCKVQDIAQRGDPVQESVGVSGLWDD 1661

Query: 252  ---GARRPFPALATLPAEEADEGGXXXXXXXXXXAQEGRLGDEVAPALARGRAAEEVGDA 82
               GA    PAL  +  + A+  G           +EG++ D +            VGDA
Sbjct: 1662 GLRGAAANVPALEMVSQDSAEPSGSEESESASLEGEEGQVTDHLDAPQEVTSMVPGVGDA 1721
to top
>FBX27_HUMAN (Q8NI29) F-box only protein 27 (F-box/G-domain protein 5)|
          Length = 283

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 4   EMRDPEAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 138
           E    EA  L +LP  ++L +L+ VP    L RC    + WR LV
Sbjct: 17  EPEPEEALDLSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALV 61
to top
>FBX2_MOUSE (Q80UW2) F-box only protein 2|
          Length = 297

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 31  LVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLVT-EPSFLRRRWPEG 177
           L  LPE ++L +LA +P    +  C     RW++LV   P +L +   EG
Sbjct: 51  LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEG 100
to top
>GAK_RAT (P97874) Cyclin G-associated kinase (EC 2.7.11.1)|
          Length = 1305

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 356  SGTTRSSKRPAAPGTKEPSRGRPGPRTDHGART 258
            S ++  + RP APGT  P + +P PR     R+
Sbjct: 1114 SNSSWQTTRPTAPGTSWPPQAKPAPRASEQLRS 1146
to top
>H3_VOLCA (P08437) Histone H3|
          Length = 134

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + + T  + K PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLA-TKAARKTPATGGVKKPHRYRPG 43
to top
>H3_GRIJA (Q7XYZ0) Histone H3|
          Length = 135

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA+ G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPASGGVKKPHRFRPG 44
to top
>H3_CHLRE (P50564) Histone H3|
          Length = 134

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + + T  + K PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLA-TKAARKTPATGGVKKPHRYRPG 43
to top
>H3_CAEEL (P08898) Histone H3|
          Length = 135

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA+ G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPASGGVKKPHRYRPG 44
to top
>H31_SCHPO (P09988) Histone H3.1/H3.2|
          Length = 135

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLASKAARKAAPATGGVKKPHRYRPG 44
to top
>MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 831

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/74 (29%), Positives = 30/74 (40%)
 Frame = -2

Query: 506 QSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRP 327
           Q+ + G S   AP SR  T+  +T+             PK   S P     G + SS+ P
Sbjct: 542 QTPKPGTSHPTAPTSRTSTSLMTTSS-----RSDSTQTPKPGTSQPMVPIPGASTSSQ-P 595

Query: 326 AAPGTKEPSRGRPG 285
           A P    P   +PG
Sbjct: 596 ATPSGSSPQTPKPG 609
to top
>FRS3_HUMAN (O43559) Fibroblast growth factor receptor substrate 3 (FGFR|
           substrate 3) (Suc1-associated neurotrophic factor target
           2) (SNT-2) (FGFR signalling adaptor SNT2)
          Length = 491

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/77 (27%), Positives = 30/77 (38%)
 Frame = -2

Query: 512 KNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSK 333
           ++Q+Q+ GG      +SR      S   PD          P  TR+A R   S     ++
Sbjct: 332 ESQAQQLGGEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLTR 391

Query: 332 RPAAPGTKEPSRGRPGP 282
           R  +P        RPGP
Sbjct: 392 RRGSPRVFNFDFRRPGP 408
to top
>H3_WHEAT (P68428) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_URECA (P84239) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_TIGCA (P84237) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_STRPU (P06352) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_STRDR (P69079) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_SOLST (P69078) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PYCHE (P69077) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PSAMI (P69076) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PORAF (P84232) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PLADU (P84235) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PISOC (P69075) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PISBR (P69074) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_PETCR (P69248) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_PEA (P68427) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_PARLI (P69073) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_ONOVI (P68430) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_ONCMY (P84234) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_MORAP (Q9HDN1) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_LYTPI (P69072) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_ICTBU (P84231) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_EUPES (Q71T45) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_ENCAL (P08903) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_DROME (P02299) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_DROHY (P84236) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_DERIM (P69071) Histone H3, embryonic|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_CHITH (P84238) Histone H3 (H3)|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_CAIMO (P84230) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H3_BRANA (Q6LCK1) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_ASPOF (Q6LBE3) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3_ARATH (P59226) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H3T_HUMAN (Q16695) Histone H3.4 (H3t) (H3/t) (H3/g)|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKVARKSAPATGGVKKPHRYRPG 44
to top
>H32_ORYSA (P08860) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H32_MOUSE (P84228) Histone H3.2|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H32_MAIZE (Q53X03) Histone H3 type 2|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H32_BOVIN (P84227) Histone H3.2|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H31_XENLA (P84233) Histone H3.1|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H31_ORYSA (P69247) Histone H3|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H31_MOUSE (P68433) Histone H3.1|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H31_MEDSA (P68429) Histone H3.1 (Major histone H3)|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H31_MAIZE (P69246) Histone H3 type 1|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRFRPG 44
to top
>H31_HUMAN (P68431) Histone H3.1 (H3/a) (H3/b) (H3/c) (H3/d) (H3/f) (H3/h)|
           (H3/i) (H3/j) (H3/k) (H3/l)
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H31_CHICK (P84229) Histone H3 (Histone H3 class I)|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>H31_BOVIN (P68432) Histone H3.1|
          Length = 135

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -2

Query: 455 QTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSRGRPG 285
           QTAR+ST G                  APR + +        PA  G K+P R RPG
Sbjct: 5   QTARKSTGG-----------------KAPRKQLATKAARKSAPATGGVKKPHRYRPG 44
to top
>RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-rich 2|
           (RNA-binding protein srp-4) (CeSRp40)
          Length = 281

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/79 (25%), Positives = 31/79 (39%)
 Frame = -2

Query: 515 SKNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSS 336
           S+++S R    +     SR   ARR + G D         +PK+ RS  R  +   +RS 
Sbjct: 189 SRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKK-RSDKRARSESKSRSR 247

Query: 335 KRPAAPGTKEPSRGRPGPR 279
                  +  P    P P+
Sbjct: 248 SGGRRSRSNSPPNRSPSPK 266
to top
>FBX27_MOUSE (Q6DIA9) F-box only protein 27|
          Length = 280

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 13  DP-EAPSLVRLPEHVVLEILARVPGVADLFRCAAARKRWRDLV 138
           DP E   L RLP  ++L +L+ VP    L  C    + WR LV
Sbjct: 16  DPQEVLDLSRLPPELLLLVLSHVPPRTLLMHCRRVCRAWRALV 58
to top
>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -2

Query: 512 KNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSK 333
           K +S  SG S+  +  S       ST+                + ++ R  +S T+RSS 
Sbjct: 64  KRRSASSGSSSTRSRSS-------STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS 116

Query: 332 RPAAPGTKEPSRGRPGPRTDHGARTK 255
             ++ G+  PSR R   R    +++K
Sbjct: 117 SSSSSGSPSPSRRRHDNRRRSRSKSK 142
to top
>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -2

Query: 512 KNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSK 333
           K +S  SG S+  +  S       ST+                + ++ R  +S T+RSS 
Sbjct: 64  KRRSASSGSSSTRSRSS-------STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS 116

Query: 332 RPAAPGTKEPSRGRPGPRTDHGARTK 255
             ++ G+  PSR R   R    +++K
Sbjct: 117 SSSSSGSPSPSRRRHDNRRRSRSKSK 142
to top
>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -2

Query: 512 KNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSK 333
           K +S  SG S+  +  S       ST+                + ++ R  +S T+RSS 
Sbjct: 64  KRRSASSGSSSTRSRSS-------STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS 116

Query: 332 RPAAPGTKEPSRGRPGPRTDHGARTK 255
             ++ G+  PSR R   R    +++K
Sbjct: 117 SSSSSGSPSPSRRRHDNRRRSRSKSK 142
to top
>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -2

Query: 512 KNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSK 333
           K +S  SG S+  +  S       ST+                + ++ R  +S T+RSS 
Sbjct: 64  KRRSASSGSSSTRSRSS-------STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS 116

Query: 332 RPAAPGTKEPSRGRPGPRTDHGARTK 255
             ++ G+  PSR R   R    +++K
Sbjct: 117 SSSSSGSPSPSRRRHDNRRRSRSKSK 142
to top
>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related|
           protein LDC2)
          Length = 305

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/86 (24%), Positives = 36/86 (41%)
 Frame = -2

Query: 512 KNQSQRSGGSTWHAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSK 333
           K +S  SG S+  +  S       ST+                + ++ R  +S T+RSS 
Sbjct: 64  KRRSASSGSSSTRSRSS-------STSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSS 116

Query: 332 RPAAPGTKEPSRGRPGPRTDHGARTK 255
             ++ G+  PSR R   R    +++K
Sbjct: 117 SSSSSGSPSPSRRRHDNRRRSRSKSK 142
to top
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
 Frame = -2

Query: 515 SKNQSQ-RSGGSTWHAPESRLQTARRSTA-----GPDXXXXXXXXXAPKRTRSAPRCEAS 354
           S+++S+ RS     H+  SR ++  RS +      P          +P R+RS  RC +S
Sbjct: 259 SRSRSRSRSRSPLSHSRSSRSRSRSRSRSRSRSRSPLSHSRSSRSRSPSRSRSPSRCASS 318

Query: 353 GTTRSSKRPAAPGTKEPSRGRPGPRTDHG 267
            +   + RP    +   +   P PR   G
Sbjct: 319 RSRSPAHRPRRHSSSRVNPPGPPPRRPAG 347
to top
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = -2

Query: 476  HAPESRLQTARRSTAGPDXXXXXXXXXAPKRTRSAPRCEASGTTRSSKRPAAPGTKEPSR 297
            H PES  Q     T+ P+           +R  S PR +AS    SS+  AAPG   PS 
Sbjct: 1199 HQPESLSQPVSPRTSEPESQGISKMKPPSQRCVS-PREKASTPPDSSRAWAAPGDSSPST 1257

Query: 296  GR 291
             R
Sbjct: 1258 RR 1259


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,111,894
Number of Sequences: 219361
Number of extensions: 845706
Number of successful extensions: 3954
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 3610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3934
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top