Clone Information

BLAST Search Result

Clone Name	bart31c08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	229	4e-68
2	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	228	6e-68
3	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	224	9e-67
4	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	218	6e-65
5	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	174	7e-51
6	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	173	9e-51
7	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	174	2e-50
8	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	172	2e-50
9	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	172	3e-50
10	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	138	2e-40
11	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	136	1e-39
12	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	44	7e-07
13	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	34	2e-05
14	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	38	4e-05
15	MUTS2_THETN (Q8R9D0) MutS2 protein	37	0.041
16	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	36	0.070
17	Y1254_METJA (Q58651) Hypothetical protein MJ1254	35	0.12
18	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	35	0.21
19	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	35	0.21
20	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	33	0.46
21	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	33	0.46
22	RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad...	33	0.46
23	DNAK_FUSNN (Q8RH05) Chaperone protein dnaK (Heat shock protein 7...	33	0.46
24	KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase ...	33	0.60
25	USO1_YEAST (P25386) Intracellular protein transport protein USO1...	33	0.60
26	EX7S_BACSK (Q5WF61) Probable exodeoxyribonuclease VII small subu...	32	1.0
27	PHF14_HUMAN (O94880) PHD finger protein 14	32	1.0
28	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	32	1.0
29	CE290_HUMAN (O15078) Centrosomal protein Cep290	32	1.0
30	SMC6_YEAST (Q12749) Structural maintenance of chromosome 6 (DNA ...	32	1.3
31	SMC_METJA (Q59037) Chromosome partition protein smc homolog	32	1.3
32	TIG_ANAMM (Q5PBD1) Trigger factor (TF)	32	1.3
33	GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p2...	32	1.3
34	GRPE_CLOPE (Q8XIT0) Protein grpE (HSP-70 cofactor)	32	1.3
35	BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui	32	1.7
36	PHF14_MOUSE (Q9D4H9) PHD finger protein 14	32	1.7
37	Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620	32	1.7
38	PREA_BACTU (P10025) Plasmid recombination enzyme (Mobilization p...	32	1.7
39	SYA_HAEDU (Q7VLK0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	32	1.7
40	JJJ1_YEAST (P53863) J protein type 1	32	1.7
41	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	31	2.3
42	YP146_YEAST (Q12080) Protein YPL146C	31	2.3
43	MYO1_YEAST (P08964) Myosin-1 (Type II myosin)	31	2.3
44	ANFV_ANGJA (P22642) Ventricular natriuretic peptide precursor (VNP)	31	2.3
45	HISZ_THETN (Q8R880) ATP phosphoribosyltransferase regulatory sub...	31	3.0
46	MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Meroz...	31	3.0
47	CSK2B_DROME (P08182) Casein kinase II subunit beta (CK II beta)	31	3.0
48	GATE_METKA (Q8TZ12) Glutamyl-tRNA(Gln) amidotransferase subunit ...	30	3.9
49	YG18_YEAST (P53207) Hypothetical 71.4 kDa protein in SEC9-MSB2 i...	30	3.9
50	RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase	30	3.9
51	ARGB_STAES (Q8CSG0) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin...	30	3.9
52	ARGB_STAEQ (Q5HP23) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin...	30	3.9
53	TPM2_SCHMA (P42638) Tropomyosin 2 (TMII)	30	3.9
54	COAE_STAAW (P63832) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.0
55	COAE_STAAS (Q6G8N8) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.0
56	COAE_STAAR (Q6GG18) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.0
57	COAE_STAAN (P63831) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.0
58	COAE_STAAM (P63830) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.0
59	COAE_STAAC (Q5HF85) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.0
60	SYV_TREPA (O83998) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	30	5.0
61	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	30	5.0
62	MAD1_YEAST (P40957) Spindle assembly checkpoint component MAD1 (...	30	5.0
63	MET10_YEAST (P39692) Sulfite reductase [NADPH] flavoprotein comp...	30	5.0
64	VPS60_YEAST (Q03390) Vacuolar protein sorting-associated protein...	30	6.6
65	RCC1_DROME (P25171) Regulator of chromosome condensation (Chroma...	30	6.6
66	UVRB_SYMTH (Q67T57) UvrABC system protein B (Protein uvrB) (Exci...	30	6.6
67	MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II ...	30	6.6
68	LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (P...	30	6.6
69	DNAK_MYCS5 (Q4A658) Chaperone protein dnaK (Heat shock protein 7...	30	6.6
70	TPM2_DROME (P09491) Tropomyosin-2 (Tropomyosin I)	30	6.6
71	GBF1_ARATH (P42774) G-box-binding factor 1 (AtbZIP41)	30	6.6
72	FMT_LEPIN (Q8F3K6) Methionyl-tRNA formyltransferase (EC 2.1.2.9)	30	6.6
73	FMT_LEPIC (Q72S34) Methionyl-tRNA formyltransferase (EC 2.1.2.9)	30	6.6
74	LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 ...	30	6.6
75	RESA_PLAFP (Q26005) Ring-infected erythrocyte surface antigen (F...	30	6.6
76	ZYGBL_MOUSE (Q80ZJ6) Zyg-11 protein homolog (Zyg-11 homolog B-like)	29	8.6
77	CINA_THEMA (Q9S5X1) CinA-like protein	29	8.6
78	MSP1_PLAFW (P04933) Merozoite surface protein 1 precursor (Meroz...	29	8.6
79	SYV_BUCAP (Q8K9I1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	29	8.6
80	MSP1_PLAFK (P04932) Merozoite surface protein 1 precursor (Meroz...	29	8.6
81	HISZ_BACCR (Q81G08) ATP phosphoribosyltransferase regulatory sub...	29	8.6
82	RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen pr...	29	8.6
83	MSP1_PLAFM (P08569) Merozoite surface protein 1 precursor (Meroz...	29	8.6
84	MSP1_PLAFF (P13819) Merozoite surface protein 1 precursor (Meroz...	29	8.6
85	MSP1_PLAFN (P13820) Merozoite surface protein 1 precursor (Meroz...	29	8.6
86	GLMU_CARHZ (Q3AFM0) Bifunctional protein glmU [Includes: UDP-N-a...	29	8.6
87	ZYGBL_PONPY (Q5RAG3) Zyg-11 protein homolog (Zyg-11 homolog B-like)	29	8.6
88	ZYGBL_HUMAN (Q7Z7L7) Zyg-11 protein homolog (Zyg-11 homolog B-like)	29	8.6
89	MSP1_PLAFP (P50495) Merozoite surface protein 1 precursor (Meroz...	29	8.6
90	MSP1_PLAFC (P04934) Merozoite surface protein 1 precursor (Meroz...	29	8.6

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score =  229 bits (583), Expect(2) = 4e-68
 Identities = 111/128 (86%), Positives = 124/128 (96%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPY 310
           E DQL +MSTEDI+RA+RLLDNE+R++K+ELQR NLEL++ K+KIKENQEKIKLNKQLPY
Sbjct: 12  EDDQLHAMSTEDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPY 71

Query: 311 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKP 490
           LVGNIVEILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDPDNLKP
Sbjct: 72  LVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKP 131

Query: 491 GDLVGVNR 514
           GDLVGVN+
Sbjct: 132 GDLVGVNK 139



 Score = 49.3 bits (116), Expect(2) = 4e-68
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLILDTLPSEYDSRVKAMEVD
Sbjct: 139 KDSYLILDTLPSEYDSRVKAMEVD 162

to top

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score =  228 bits (581), Expect(2) = 6e-68
 Identities = 115/128 (89%), Positives = 122/128 (95%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPY 310
           + DQL SMSTE+IVRATRLLDNE RVLKDELQR NLE+E+ K+KIKENQEKIKLNKQLPY
Sbjct: 18  DDDQLASMSTENIVRATRLLDNETRVLKDELQRTNLEVESYKEKIKENQEKIKLNKQLPY 77

Query: 311 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKP 490
           LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDP+ LKP
Sbjct: 78  LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKP 137

Query: 491 GDLVGVNR 514
           GDLVGVN+
Sbjct: 138 GDLVGVNK 145



 Score = 49.3 bits (116), Expect(2) = 6e-68
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLILDTLPSEYDSRVKAMEVD
Sbjct: 145 KDSYLILDTLPSEYDSRVKAMEVD 168

to top

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score =  224 bits (571), Expect(2) = 9e-67
 Identities = 110/128 (85%), Positives = 122/128 (95%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPY 310
           E DQL SMSTEDIVRATRLL+NE+R+LK++ QR NLE ++ K+KIKENQEKIKLNKQLPY
Sbjct: 13  EEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPY 72

Query: 311 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKP 490
           LVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDPD+LKP
Sbjct: 73  LVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKP 132

Query: 491 GDLVGVNR 514
           GDLVGVN+
Sbjct: 133 GDLVGVNK 140



 Score = 49.3 bits (116), Expect(2) = 9e-67
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLILDTLPSEYDSRVKAMEVD
Sbjct: 140 KDSYLILDTLPSEYDSRVKAMEVD 163

to top

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score =  218 bits (555), Expect(2) = 6e-65
 Identities = 108/128 (84%), Positives = 121/128 (94%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPY 310
           E DQL SM+T+DI RA+RLL NE+R+LK+E QR NL+LE+VK+KIKENQEKIKLNKQLPY
Sbjct: 8   EGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPY 67

Query: 311 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKP 490
           LVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDPD LKP
Sbjct: 68  LVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKP 127

Query: 491 GDLVGVNR 514
           GDLVGVN+
Sbjct: 128 GDLVGVNK 135



 Score = 49.3 bits (116), Expect(2) = 6e-65
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLILDTLPSEYDSRVKAMEVD
Sbjct: 135 KDSYLILDTLPSEYDSRVKAMEVD 158

to top

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score =  174 bits (440), Expect(2) = 7e-51
 Identities = 84/126 (66%), Positives = 108/126 (85%)
 Frame = +2

Query: 137 DQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLV 316
           +++  MSTE+IV+ TRLLD+E++++K E+ R   EL+ +KDKIKEN EKIK+NK LPYLV
Sbjct: 31  EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90

Query: 317 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGD 496
            N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPVIGLVD + LKPGD
Sbjct: 91  SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149

Query: 497 LVGVNR 514
           LVGVN+
Sbjct: 150 LVGVNK 155



 Score = 46.6 bits (109), Expect(2) = 7e-51
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLIL+TLP+EYDSRVKAMEVD
Sbjct: 155 KDSYLILETLPTEYDSRVKAMEVD 178

to top

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score =  173 bits (439), Expect(2) = 9e-51
 Identities = 83/126 (65%), Positives = 108/126 (85%)
 Frame = +2

Query: 137 DQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLV 316
           +++  MSTE+I++ TRLLD+E++++K E+ R   EL+ +KDKIKEN EKIK+NK LPYLV
Sbjct: 31  EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 90

Query: 317 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGD 496
            N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPVIGLVD + LKPGD
Sbjct: 91  SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 149

Query: 497 LVGVNR 514
           LVGVN+
Sbjct: 150 LVGVNK 155



 Score = 46.6 bits (109), Expect(2) = 9e-51
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLIL+TLP+EYDSRVKAMEVD
Sbjct: 155 KDSYLILETLPTEYDSRVKAMEVD 178

to top

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score =  174 bits (440), Expect(2) = 2e-50
 Identities = 84/126 (66%), Positives = 108/126 (85%)
 Frame = +2

Query: 137 DQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLV 316
           +++  MSTE+IV+ TRLLD+E++++K E+ R   EL+ +KDKIKEN EKIK+NK LPYLV
Sbjct: 34  EEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLV 93

Query: 317 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGD 496
            N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPVIGLVD + LKPGD
Sbjct: 94  SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 152

Query: 497 LVGVNR 514
           LVGVN+
Sbjct: 153 LVGVNK 158



 Score = 45.4 bits (106), Expect(2) = 2e-50
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLIL+TLP++YDSRVKAMEVD
Sbjct: 158 KDSYLILETLPTDYDSRVKAMEVD 181

to top

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score =  172 bits (436), Expect(2) = 2e-50
 Identities = 82/126 (65%), Positives = 108/126 (85%)
 Frame = +2

Query: 137 DQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLV 316
           +++  MSTE+I++ TRLLD+E++++K E+ R   EL+ ++DKIKEN EKIK+NK LPYLV
Sbjct: 15  EEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLV 74

Query: 317 GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGD 496
            N++E+L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPVIGLVD + LKPGD
Sbjct: 75  SNVIELLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 133

Query: 497 LVGVNR 514
           LVGVN+
Sbjct: 134 LVGVNK 139



 Score = 46.6 bits (109), Expect(2) = 2e-50
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLIL+TLP+EYDSRVKAMEVD
Sbjct: 139 KDSYLILETLPTEYDSRVKAMEVD 162

to top

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score =  172 bits (435), Expect(2) = 3e-50
 Identities = 82/121 (67%), Positives = 105/121 (86%)
 Frame = +2

Query: 152 MSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVE 331
           MSTE+I++ TRLLD+E++++K E+ R   EL+ ++DKIKEN EKIK+NK LPYLV N++E
Sbjct: 1   MSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIE 60

Query: 332 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVN 511
           +L+++P D+ EEDGANIDLDSQRKGKC V+KTSTRQT FLPVIGLVD + LKPGDLVGVN
Sbjct: 61  LLDVDPNDQ-EEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 119

Query: 512 R 514
           +
Sbjct: 120 K 120



 Score = 46.6 bits (109), Expect(2) = 3e-50
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLIL+TLP+EYDSRVKAMEVD
Sbjct: 120 KDSYLILETLPTEYDSRVKAMEVD 143

to top

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score =  138 bits (347), Expect(2) = 2e-40
 Identities = 68/135 (50%), Positives = 99/135 (73%), Gaps = 9/135 (6%)
 Frame = +2

Query: 137 DQLD----SMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQL 304
           D+LD    ++ST+++    +LLDNE+R+ + ELQR + E   + +KIK+N+EKIK N+QL
Sbjct: 16  DELDQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQL 75

Query: 305 PYLVGNIVEILEMNPEDEAEE-----DGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLV 469
           PYLV N+VE+++MN  ++ E       G N++LD+   GK  V+KTS+RQT+FLP++GLV
Sbjct: 76  PYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLV 135

Query: 470 DPDNLKPGDLVGVNR 514
           DPD LKP DLVGVN+
Sbjct: 136 DPDKLKPNDLVGVNK 150



 Score = 47.8 bits (112), Expect(2) = 2e-40
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLILDTLPSE+DSRVKAMEVD
Sbjct: 150 KDSYLILDTLPSEFDSRVKAMEVD 173

to top

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score =  136 bits (343), Expect(2) = 1e-39
 Identities = 65/118 (55%), Positives = 90/118 (76%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           +++   TRLL+N+++V+K E QR   E   + +KIKENQEKI  NK LPYLVGN+VEIL+
Sbjct: 37  DELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILD 96

Query: 341 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNR 514
           M P++   ++ AN + ++ R GK  V+KTSTRQTIFLP+IGLV+P+ L PGDL+GVN+
Sbjct: 97  MQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNK 154



 Score = 46.2 bits (108), Expect(2) = 1e-39
 Identities = 21/24 (87%), Positives = 23/24 (95%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           +DSYLI+D LPSEYDSRVKAMEVD
Sbjct: 154 KDSYLIIDKLPSEYDSRVKAMEVD 177

to top

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 44.3 bits (103), Expect(2) = 7e-07
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQ---EKIKLNKQLPYLVGNIVE 331
           E++    R+ + E R+LK EL++  LE EN++  +KEN+    ++   +  P +VG +V 
Sbjct: 41  EELQEKARIAELESRILKLELEKKELERENLQ-LMKENEILRRELDRMRVPPLIVGTVV- 98

Query: 332 ILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVN 511
                            D   +RK   VV+K+ST  +  + V   V+PD+L PG  V +N
Sbjct: 99  -----------------DKVGERK---VVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLN 138

Query: 512 R 514
           +
Sbjct: 139 Q 139



 Score = 28.1 bits (61), Expect(2) = 7e-07
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           Q +  ++D LP   D R KAMEVD
Sbjct: 139 QQTLTVVDVLPENKDYRAKAMEVD 162

to top

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 33.9 bits (76), Expect(2) = 2e-05
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 511 QDSYLILDTLPSEYDSRVKAMEVD 582
           Q S  ++D LPSE DSRV AMEVD
Sbjct: 148 QQSMAVVDVLPSEKDSRVLAMEVD 171



 Score = 33.9 bits (76), Expect(2) = 2e-05
 Identities = 29/114 (25%), Positives = 51/114 (44%)
 Frame = +2

Query: 173 RATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPE 352
           R  + L+ E+ + +DE      EL   +  I++ +  ++  K+ P +VG + EIL     
Sbjct: 56  RRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEIL----- 110

Query: 353 DEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNR 514
               +DG             V++K+ST       V   VD + L+PG  V +N+
Sbjct: 111 ----DDGR------------VIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQ 148

to top

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 38.1 bits (87), Expect(2) = 4e-05
 Identities = 34/107 (31%), Positives = 51/107 (47%)
 Frame = +2

Query: 191 DNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED 370
           D E+R+LKD+++                +EKI L K+L Y    I ++L   P  EA   
Sbjct: 22  DVEIRILKDKVR-------------SLTKEKISLQKELEYYKNEITKLLS-PPYIEAVVL 67

Query: 371 GANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVN 511
                +D  R    VV+K+ST   + + V   VD  +LKPG +V +N
Sbjct: 68  EV---IDDNR----VVVKSSTGPNLIVNVAAGVDARSLKPGAIVALN 107



 Score = 28.1 bits (61), Expect(2) = 4e-05
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 526 ILDTLPSEYDSRVKAMEVD 582
           I+D LP  YD  VKAMEV+
Sbjct: 113 IVDVLPGRYDPLVKAMEVE 131

to top

>MUTS2_THETN (Q8R9D0) MutS2 protein|
          Length = 790

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKI-KENQEKIK-LNKQLPYLVGNIVEI 334
           E+  +    L  EV VLK+EL++   +LE+ KDKI KE +EK + + K+       +++ 
Sbjct: 533 ENAYQEVERLKKEVEVLKEELEKEKRKLESQKDKILKEAKEKAREIIKEAKQTAEEVIKR 592

Query: 335 LEMNPEDEAEEDGA 376
           ++   E E  +D A
Sbjct: 593 IKEAEEKEKNKDRA 606

to top

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 25/102 (24%), Positives = 45/102 (44%)
 Frame = +2

Query: 206 VLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 385
           +++DE  RN   L+   +K +E + K+   +  P  VGN+ EI++ N             
Sbjct: 72  MMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNH------------ 119

Query: 386 LDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVN 511
                     ++ TS     ++ ++  VD D L+PG  V +N
Sbjct: 120 ---------AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLN 152

to top

>Y1254_METJA (Q58651) Hypothetical protein MJ1254|
          Length = 469

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = +2

Query: 146 DSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKI-KLNKQL 304
           + +S   I+  T+ + NE+  LK++L+    E++N+  KIK+ ++K+ K NK L
Sbjct: 271 EKISKRKIIERTKNIKNELTSLKNKLKEKEEEIKNLAIKIKDLEDKLSKANKNL 324

to top

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 18/73 (24%), Positives = 37/73 (50%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           ED+    + L  E+  L+ + +    E +N+K +    QE++K  + +P ++G  +E ++
Sbjct: 38  EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97

Query: 341 MNPEDEAEEDGAN 379
            N    A   G+N
Sbjct: 98  QNTAIVASTTGSN 110

to top

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 20/117 (17%), Positives = 56/117 (47%)
 Frame = +2

Query: 164 DIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM 343
           D+ +  + L++++     + +    E +N+K ++   QE++K  + +P L+G ++E+++ 
Sbjct: 24  DLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDS 83

Query: 344 NPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNR 514
           N                       ++++++  T+ + ++  +D + LKP   V + R
Sbjct: 84  NTG---------------------IVQSTSGSTLCVRILSTIDRELLKPSASVALQR 119

to top

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 21/118 (17%), Positives = 52/118 (44%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           ED+    + L  E+  L+ + +    E +N+K +    QE++K  + +P ++G  +E ++
Sbjct: 38  EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97

Query: 341 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNR 514
            N                       ++ ++T    ++ ++  +D + LKP   V +++
Sbjct: 98  QN---------------------TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHK 134

to top

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 21/118 (17%), Positives = 52/118 (44%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           ED+    + L  E+  L+ + +    E +N+K +    QE++K  + +P ++G  +E ++
Sbjct: 38  EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVD 97

Query: 341 MNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNR 514
            N                       ++ ++T    ++ ++  +D + LKP   V +++
Sbjct: 98  QN---------------------TAIVGSTTGSNYYVRILSTIDRELLKPNASVALHK 134

to top

>RAD50_AQUAE (O67124) Probable DNA double-strand break repair rad50 ATPase|
          Length = 978

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
 Frame = +2

Query: 137 DQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENV---KDKIKENQEKIKLNKQLP 307
           +++D   TE  VR  +L   E+ VLKDEL     EL  +   K+K KE +E+    K+L 
Sbjct: 284 EEIDKKLTELKVRKNKLT-KELAVLKDELSFAQEELNRIEAEKEKFKEEKER---EKELE 339

Query: 308 YLVGNIVEILEMNPE 352
           + +  + EI E+  E
Sbjct: 340 HRLKKLQEIKEILKE 354

to top

>DNAK_FUSNN (Q8RH05) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 607

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 17/58 (29%), Positives = 32/58 (55%)
 Frame = +2

Query: 212 KDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 385
           K+E++R   E E   ++ K+ QE ++   +   L+    + L+ NP+  +EED  NI+
Sbjct: 480 KEEIERMTKEAEAHAEEDKKFQELVEARNKADQLISATEKTLKENPDKVSEEDKKNIE 537

to top

>KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV)
          Length = 469

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 23/90 (25%), Positives = 46/90 (51%)
 Frame = +2

Query: 146 DSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNI 325
           D  ST+D   +T LL  +++  +++ + + +E E   D++++ Q + ++ K         
Sbjct: 354 DPPSTQDAKDSTDLLGKKMQ--EEDQEEDQVEAEASADEMRKLQSE-EVEKDAGVKEEET 410

Query: 326 VEILEMNPEDEAEEDGANIDLDSQRKGKCV 415
             ++  +PEDE E D   +  DS+ K K V
Sbjct: 411 SSMVPQDPEDELETDDPEMKRDSEEKLKSV 440

to top

>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)|
          Length = 1790

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
 Frame = +2

Query: 164  DIVRATRLLDNEVRVLKDELQ---RNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEI 334
            D++      + ++  LK +L+   ++  ELE VK ++   QEKI++N +   ++ + +E 
Sbjct: 1555 DLISRINESEKDIEELKSKLRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLED 1614

Query: 335  LEMNPEDEAEEDGAN 379
            +E   +D+  E  +N
Sbjct: 1615 IERELKDKQAEIKSN 1629

to top

>EX7S_BACSK (Q5WF61) Probable exodeoxyribonuclease VII small subunit (EC|
           3.1.11.6) (Exonuclease VII small subunit)
          Length = 79

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
 Frame = +2

Query: 209 LKDELQRNNLELENVKDKIKE--------NQEKIKLNKQLPYLVGNIVEILEMNPEDEAE 364
           L ++L+  N+ LE   D  KE        +++ +K+ KQL  ++    E++E N E+EA 
Sbjct: 19  LVEKLEEGNVPLEQAIDMFKEGMDLSQSCHEKLLKVEKQLDQIMHEDGELVEANLEEEAN 78

Query: 365 E 367
           E
Sbjct: 79  E 79

to top

>PHF14_HUMAN (O94880) PHD finger protein 14|
          Length = 888

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
 Frame = +2

Query: 218 ELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQ 397
           ++Q N  E +N+KDK++  QEK+ +          + E LE       E    N  L S+
Sbjct: 632 QIQENMAEQKNIKDKLENEQEKLHVE------YNKLCESLE-------ELQNLNGKLRSE 678

Query: 398 RKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLV-GVNRTAT 523
            +G   +L   T Q + +P I L  P   KP     G  +T+T
Sbjct: 679 GQGIWALLGRITGQKLNIPAI-LRAPKERKPSKKEGGTQKTST 720

to top

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 17/78 (21%), Positives = 37/78 (47%)
 Frame = +2

Query: 146 DSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNI 325
           D + +ED+    + L   +  L+ + +    E  N+K +    QE++K  + +P ++G  
Sbjct: 30  DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 89

Query: 326 VEILEMNPEDEAEEDGAN 379
           +E ++ N        G+N
Sbjct: 90  LEAVDQNTGIVGSTTGSN 107

to top

>CE290_HUMAN (O15078) Centrosomal protein Cep290|
          Length = 1539

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
 Frame = +2

Query: 146  DSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEK-IKLNKQLPYLVGN 322
            DS S + IV  TR+ + +++ L+ ++ + N  + ++K  +KE  E+  K+NK    L   
Sbjct: 1322 DSKSWKSIV-VTRMYETKLKELETDIAKKNQSITDLKQLVKEATEREQKVNKYNEDLEQQ 1380

Query: 323  IVEILEMNPEDEAEEDGANIDLDSQR 400
            I +IL+  PE    E G   +L   R
Sbjct: 1381 I-KILKHVPEGAETEQGLKRELQVLR 1405

to top

>SMC6_YEAST (Q12749) Structural maintenance of chromosome 6 (DNA repair protein|
           RHC18) (Rad18 homolog)
          Length = 1114

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 14/52 (26%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
 Frame = +2

Query: 140 QLDSMSTEDIVR--ATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIK 289
           +LD+++ +D +R       DN  + LKD +++   EL+N++D+ +E   +++
Sbjct: 676 RLDTVTYQDKIRLKVNSSSDNGTQYLKDLIEQETKELQNIRDRYEEKLSEVR 727

to top

>SMC_METJA (Q59037) Chromosome partition protein smc homolog|
          Length = 1169

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
 Frame = +2

Query: 188 LDNEVRVLK---DELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPE-D 355
           ++N+ +VL    +EL++  +E+EN K +IKE Q+KI  N+           I+E   +  
Sbjct: 309 IENDKKVLDSSINELKKVEVEIENKKKEIKETQKKIIENRD---------SIIEKEQQIK 359

Query: 356 EAEEDGANIDLDSQR 400
           E EE   N++ + +R
Sbjct: 360 EIEEKIKNLNYEKER 374

to top

>TIG_ANAMM (Q5PBD1) Trigger factor (TF)|
          Length = 466

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 25/76 (32%), Positives = 37/76 (48%)
 Frame = +2

Query: 182 RLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEA 361
           R+L   + V++  +QR  +  E + DK+K   E         + VGN  E LE   +D  
Sbjct: 13  RILCAPLIVVECFMQRFYVVKEVLSDKLKRVYE---------FTVGN--EYLEQQVDDRL 61

Query: 362 EEDGANIDLDSQRKGK 409
            E  AN+ +D  RKGK
Sbjct: 62  REIAANVRMDGFRKGK 77

to top

>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa|
           golgin) (Golgin-245) (Protein 72.1)
          Length = 2230

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
 Frame = +2

Query: 140 QLDSMSTE--DIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEK 283
           +L+S+S+E  ++++A   L+ E+ VLKD+  +   ELE   D+ K + ++
Sbjct: 685 ELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQ 734



 Score = 29.6 bits (65), Expect = 6.6
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 188  LDNEVRVLKDELQRNNLELENVKDKIKENQEKIK 289
            L+N+V  +K EL+    ELE+V   +K  +E++K
Sbjct: 1590 LENQVYSMKAELETKKKELEHVNLSVKSKEEELK 1623

to top

>GRPE_CLOPE (Q8XIT0) Protein grpE (HSP-70 cofactor)|
          Length = 208

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +2

Query: 137 DQLDSMSTEDIV--RATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKI 286
           ++L ++  E+ +    T+ L+NE+  LKD L R + E EN + +  + +E+I
Sbjct: 51  EELQALKEENTMFKSKTKKLENELEALKDRLLRISAEYENYRKRTDKEKERI 102

to top

>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui|
          Length = 677

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 28/120 (23%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPY 310
           +TD L+ M+  +    T+  D     L + L RN ++L+N++   KEN  + +  K+   
Sbjct: 388 QTDVLNLMTDVENFTGTKK-DKRYLFLDEMLTRNLIKLDNIETDGKENIRQAR--KEAIK 444

Query: 311 LVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKC----VVLKTSTR--QTIFLPVIGLVD 472
            +   + +LE   +   ++  A  + ++Q + +C    V +K +T+  QT  +P   +V+
Sbjct: 445 CIQKCIAVLEAKADSSNQQRKAQPEQETQVQDECQSHDVDMKENTQNDQTTEIPAQPIVE 504

to top

>PHF14_MOUSE (Q9D4H9) PHD finger protein 14|
          Length = 881

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 28/96 (29%), Positives = 42/96 (43%)
 Frame = +2

Query: 218 ELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQ 397
           ++Q N  E +N+KDK++  QEK+ +          + E LE       E    N  L S+
Sbjct: 625 QIQENMAEQKNIKDKLENEQEKLHVE------YNKLCESLE-------ELQNLNGKLRSE 671

Query: 398 RKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVG 505
            +G   +L   T Q + +P I L  P   KP    G
Sbjct: 672 GQGIWALLGRITGQKLNVPAI-LRAPKERKPSKKEG 706

to top

>Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620|
          Length = 579

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/75 (25%), Positives = 33/75 (44%)
 Frame = +2

Query: 182 RLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEA 361
           R ++    ++K+  +R   E+E    K+  ++EK K  K       N+ E+ E   E E 
Sbjct: 294 RYINKVANMIKERQRRREREIEKRVKKLLRDEEKAKGRKDGKKKSVNVSEVKEEESETEE 353

Query: 362 EEDGANIDLDSQRKG 406
            E G   ++ S   G
Sbjct: 354 VEAGEEAEMPSMEIG 368

to top

>PREA_BACTU (P10025) Plasmid recombination enzyme (Mobilization protein) (GI2|
           site-specific recombinase)
          Length = 445

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = +2

Query: 146 DSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNI 325
           + +   D+V+  + L  + + L++ ++ NNL L   K   K+N+E  ++NK+L   +G +
Sbjct: 324 ERLQKTDLVKENQSLREDNKYLEETIKGNNLAL---KHSYKQNRELEEVNKELHTEIGTL 380

Query: 326 ---VEILEMN 346
              +  L+MN
Sbjct: 381 KAHIRDLQMN 390

to top

>SYA_HAEDU (Q7VLK0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
            (AlaRS)
          Length = 874

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
 Frame = +2

Query: 188  LDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEE 367
            L +++  L+D+++RN  EL++ KDK+   Q   +L KQ+  + G  V I ++   +    
Sbjct: 727  LVDKIYQLQDKIKRNEKELQHFKDKLAA-QAGAELAKQVVQINGINVVIQKLEGIESKSL 785

Query: 368  DGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDN-LKPGDLVGV 508
                 DL +Q     VV  + +   + L V    D  N +  G+LVG+
Sbjct: 786  RTMVDDLKNQLSSVIVVFGSVSADKVNLIVGVTKDLSNKVNAGELVGL 833

to top

>JJJ1_YEAST (P53863) J protein type 1|
          Length = 590

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
 Frame = +2

Query: 179 TRLLDNEVRVLKDELQRNN--LELENVKDKIK----ENQEKIKLNKQLPYLVGNIVEI-- 334
           T+L    +  ++ E++  N  L L+N+ D  K    +   K K +  L  L   + EI  
Sbjct: 359 TKLHKKNMEEIRKEMEEENITLGLDNLSDLEKFDSADESVKEKEDIDLQALQAELAEIER 418

Query: 335 --LEMNPEDEAEEDGANIDLD 391
              E + EDE+E+D  NI++D
Sbjct: 419 KLAESSSEDESEDDNLNIEMD 439

to top

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 16/79 (20%), Positives = 39/79 (49%)
 Frame = +2

Query: 143 LDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGN 322
           L +   ED+    + L+ ++     + +    E +N+K ++   QE++K  + +P ++G 
Sbjct: 22  LSTADEEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQ 81

Query: 323 IVEILEMNPEDEAEEDGAN 379
            +E+++ N        G+N
Sbjct: 82  FMEMVDQNNGIVGSTTGSN 100

to top

>YP146_YEAST (Q12080) Protein YPL146C|
          Length = 455

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 19/73 (26%), Positives = 41/73 (56%)
 Frame = +2

Query: 191 DNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED 370
           D E+++  ++  +N  + +  ++K K ++EK+KL ++L  L   + ++ E+   +E E  
Sbjct: 303 DKEIKLSINKPVKNKKKTKYQRNKAKRHEEKVKLQQELKELRQRVKDLEEVINSEETEIL 362

Query: 371 GANIDLDSQRKGK 409
            A I+ DS +  K
Sbjct: 363 SA-IESDSNKVKK 374

to top

>MYO1_YEAST (P08964) Myosin-1 (Type II myosin)|
          Length = 1928

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 12/47 (25%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +2

Query: 155  STEDIVRATRL-LDNEVRVLKDELQRNNLELENVKDKIKENQEKIKL 292
            S++ +++ ++L L+NE++ LKD +     E+++  DK+  ++E + +
Sbjct: 1001 SSQSLIKESKLKLENEIKRLKDVINSKEEEIKSFNDKLSSSEEDLDI 1047

to top

>ANFV_ANGJA (P22642) Ventricular natriuretic peptide precursor (VNP)|
          Length = 150

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
 Frame = +2

Query: 227 RNNL-ELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRK 403
           RNN+ ELEN+KD I + +E++ +N++               PE   E +   +D + +  
Sbjct: 28  RNNVQELENLKDLIHQLEERVAVNEE---------------PEVYPESEDMKMDAEEEDA 72

Query: 404 GKCVVLKTSTRQTIFLPVIGLVDPDN---LKPGDLVGVNRTA 520
           G        + + + + ++  + P++    +  DL G+ +TA
Sbjct: 73  GISPGALRQSEENLLMNIVDRIAPESPLRSRFRDLAGLAKTA 114

to top

>HISZ_THETN (Q8R880) ATP phosphoribosyltransferase regulatory subunit|
          Length = 379

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
 Frame = +2

Query: 167 IVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQ---EKIKLNKQLPYLVGNIVEIL 337
           IVR   L + +V +L++ L++ N     ++D IK+ +   E+ KL ++LP L G    + 
Sbjct: 163 IVRNLNLGNEDVNLLRELLEQKNQSA--IEDFIKQKEIKREEAKLLRELPLLFGGEEILE 220

Query: 338 EMNPEDEAEEDGANIDLD 391
           ++  E+  E +G    LD
Sbjct: 221 KLKKENFKETEGVLEYLD 238

to top

>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (230 kDa) (PY230)
          Length = 1772

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
 Frame = +2

Query: 137 DQLDSMSTE---DIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLP 307
           D+L+ M      +I    ++ + E  +LK  +      +EN++D I++ +  I+ NK+  
Sbjct: 132 DKLNDMCANNYCEIPEHLKISEEETEMLKKVILGYRKPIENIQDDIEKLEIYIERNKETV 191

Query: 308 YLVGNIV--EILEMNPEDEAEEDGANIDLDSQRKGK 409
             +  ++  E  ++ PE   + + A+ D D   K K
Sbjct: 192 AALNALIAEETKKIQPEGNEDCNDASCDSDKYNKKK 227

to top

>CSK2B_DROME (P08182) Casein kinase II subunit beta (CK II beta)|
          Length = 235

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQ 397
           L+ N    E  +D I++      LN+Q+P     +  IL++ PEDE E++    D+  Q
Sbjct: 16  LRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPEDELEDNPLQSDMTEQ 74

to top

>GATE_METKA (Q8TZ12) Glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.-)|
           (Glu-ADT subunit E)
          Length = 640

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/77 (25%), Positives = 38/77 (49%)
 Frame = +2

Query: 143 LDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGN 322
           ++    E  V A  L++   R+ KD    +NL +++VK+ ++   E       +  L+G 
Sbjct: 498 VEETGVEPKVAAATLVNTIPRLEKDGYPVDNLTIDHVKEVLRLYAEGAIAKSGIEELLGA 557

Query: 323 IVEILEMNPEDEAEEDG 373
           +    + +PE+ AEE G
Sbjct: 558 LAADPDSDPEELAEELG 574

to top

>YG18_YEAST (P53207) Hypothetical 71.4 kDa protein in SEC9-MSB2 intergenic|
           region
          Length = 620

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
 Frame = +2

Query: 134 TDQLDSMSTEDIVRATRLL----DNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQ 301
           +D LD +  + I   T+++    + +++   +E +R   +++ V D+I++N    K +  
Sbjct: 275 SDALDQLCKDIIEFRTKVVSIEKEKKMKSTYEESRRQRHQMQKVFDQIRKNHSGAKGSAN 334

Query: 302 LPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQ 439
                    E  + N EDE EED    DL  +++ +   L+ S R+
Sbjct: 335 --------TEEEDTNMEDEDEEDDTEDDLALEKRKEERDLEESNRR 372

to top

>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase|
          Length = 993

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +2

Query: 197 EVRVLKDELQRNNLELENVKDKIKENQEKIKL-------NKQLPYLVGNIVEI 334
           E+ VLK+ L+ N    + +K+ +KEN EKI +        K+L ++   I EI
Sbjct: 325 ELGVLKESLKDNKKNPDELKENLKENDEKILILDKIKEKIKELEFIEKQIYEI 377

to top

>ARGB_STAES (Q8CSG0) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 245

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 209 LKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED 370
           L + L+ +NLE    K+KIKE      LNK +   VG + EI  M  E     D
Sbjct: 85  LLERLKESNLEFFQFKEKIKELVSAEFLNKNIYGYVGKVKEINTMLLEKMLSRD 138

to top

>ARGB_STAEQ (Q5HP23) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 245

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = +2

Query: 209 LKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED 370
           L + L+ +NLE    K+KIKE      LNK +   VG + EI  M  E     D
Sbjct: 85  LLERLKESNLEFFQFKEKIKELVSAEFLNKNIYGYVGKVKEINTMLLEKMLSRD 138

to top

>TPM2_SCHMA (P42638) Tropomyosin 2 (TMII)|
          Length = 284

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           ED  R       ++ + + EL+R    LE  + KI E +E++++       VGN V+ LE
Sbjct: 156 EDADRKYDEAARKLAITEVELERAESRLEAAESKITELEEELRI-------VGNNVKSLE 208

Query: 341 MNPEDEAEEDGA 376
           ++ ++ A+ + A
Sbjct: 209 ISEQEAAQREEA 220

to top

>COAE_STAAW (P63832) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM--NPEDEAEEDG 373
           +QRNNL LE+ K ++       K ++   +++ N+ + LE+  N E   EE+G
Sbjct: 144 MQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEG 196

to top

>COAE_STAAS (Q6G8N8) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM--NPEDEAEEDG 373
           +QRNNL LE+ K ++       K ++   +++ N+ + LE+  N E   EE+G
Sbjct: 144 MQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEG 196

to top

>COAE_STAAR (Q6GG18) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM--NPEDEAEEDG 373
           +QRNNL LE+ K ++       K ++   +++ N+ + LE+  N E   EE+G
Sbjct: 144 MQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEG 196

to top

>COAE_STAAN (P63831) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM--NPEDEAEEDG 373
           +QRNNL LE+ K ++       K ++   +++ N+ + LE+  N E   EE+G
Sbjct: 144 MQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEG 196

to top

>COAE_STAAM (P63830) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM--NPEDEAEEDG 373
           +QRNNL LE+ K ++       K ++   +++ N+ + LE+  N E   EE+G
Sbjct: 144 MQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEG 196

to top

>COAE_STAAC (Q5HF85) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 207

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +2

Query: 221 LQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM--NPEDEAEEDG 373
           +QRNNL LE+ K ++       K ++   +++ N+ + LE+  N E   EE+G
Sbjct: 144 MQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEG 196

to top

>SYV_TREPA (O83998) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 956

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +2

Query: 347 PEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVG 505
           P  E E +G    L + + G+ +++ T+  +TI   V   V PD+ +   L+G
Sbjct: 232 PRTEEEGNGVPPPLGTAQVGETIIIATTRPETILADVAVAVHPDDARYQSLIG 284

to top

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +2

Query: 191 DNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQL--PYLVGNIVEILEMNPEDEAE 364
           D  VR+L+++++    ELE ++  +  N  K +L K L  PY+   +++IL         
Sbjct: 17  DPIVRLLEEKIESLTKELEKLRQDL--NWYKGELEKLLAPPYIEAIVLDIL--------- 65

Query: 365 EDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPDNLKPGDLVGVNR 514
            DG             V++++S+   + + V   +D   LKPG LV + +
Sbjct: 66  PDGK------------VIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQ 103

to top

>MAD1_YEAST (P40957) Spindle assembly checkpoint component MAD1 (Mitotic arrest|
           deficient protein 1)
          Length = 749

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKD-----ELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNI 325
           E+I+R  +L   E  +L D      L  NNL+L N +  ++ NQ  + LNK       NI
Sbjct: 374 EEIIRDWKLTKKECLILTDMNDKLRLDNNNLKLLNDEMALERNQ-ILDLNKNYE---NNI 429

Query: 326 VEILEMNPEDEAEE 367
           V +  +N E E ++
Sbjct: 430 VNLKRLNHELEQQK 443

to top

>MET10_YEAST (P39692) Sulfite reductase [NADPH] flavoprotein component (EC|
            1.8.1.2)
          Length = 1035

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
 Frame = +2

Query: 251  VKDKIKENQEKIKL----NKQLPYLVG------NIVEILEMNPEDEAEEDGANIDLDS 394
            ++D+IKEN +++K     NK   YL G      +I + L+     +AEE G  +DLD+
Sbjct: 962  IQDRIKENLDELKTAMIDNKGSFYLCGPTWPVPDITQALQDILAKDAEERGIKVDLDA 1019

to top

>VPS60_YEAST (Q03390) Vacuolar protein sorting-associated protein VPS60|
          Length = 262

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 22/87 (25%), Positives = 42/87 (48%)
 Frame = +2

Query: 137 DQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLV 316
           DQL   S + + +A + L N +  L  ++ + N +L+N++  ++ +      N + P L 
Sbjct: 47  DQLLQESNQSMNQAQQSLSNRISQLDTQIAQLNFQLQNIQKNLQRS------NNKQPSLR 100

Query: 317 GNIVEILEMNPEDEAEEDGANIDLDSQ 397
              ++IL    + E  +D     LDSQ
Sbjct: 101 KQALKILNKRKQLENMKD----SLDSQ 123

to top

>RCC1_DROME (P25171) Regulator of chromosome condensation (Chromatin-binding|
           protein Bj1)
          Length = 547

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/61 (24%), Positives = 30/61 (49%)
 Frame = +2

Query: 257 DKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTR 436
           DK  EN +K +  + LP       +  +  P+D A+++  N+D   Q++       TS++
Sbjct: 449 DKEAENVDKQEQKENLPAKASTSSKKNKTPPQDNADKEAENVDKQEQKENLPAKASTSSK 508

Query: 437 Q 439
           +
Sbjct: 509 K 509

to top

>UVRB_SYMTH (Q67T57) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 659

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/43 (41%), Positives = 27/43 (62%)
 Frame = +2

Query: 149 SMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQ 277
           S+  E IVR T LLD EV V   + Q ++L  E ++ ++K+NQ
Sbjct: 406 SLVVEQIVRPTGLLDPEVEVRPTKGQIDDLYAE-IRARVKKNQ 447

to top

>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 2116

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
 Frame = +2

Query: 131  ETDQLDSM--STEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIK-LNKQ 301
            E + L +M  S + +    R L+  V  ++ EL    L LEN++++ +  +EK++ L ++
Sbjct: 875  EKETLKAMYDSKDALEAQKRELEIRVEDMESELDEKKLALENLQNQKRSVEEKVRDLEEE 934

Query: 302  L--PYLVGNIVEILEMNPEDEAEE 367
            L     + N +E L+   E+E EE
Sbjct: 935  LQEEQKLRNTLEKLKKKYEEELEE 958

to top

>LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (PSD-Zip70)|
          Length = 600

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 152 MSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIK-ENQEKIKLNKQ 301
           + T+D+  A R    E+ V ++ELQR   E E +++K+    QE ++L  Q
Sbjct: 428 LKTQDLESALRTKGLELEVCENELQRKKNEAELLREKVNLLEQELLELRAQ 478

to top

>DNAK_MYCS5 (Q4A658) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 596

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNLELENVKDK-IKENQEKIKLNKQLP 307
           E D       E IVRA  L+D   + L+ +  + + + +   DK IKE Q+ I   K +P
Sbjct: 495 EADAKRKEEAETIVRAESLIDQVKKALEAQGDKADAKTKEESDKLIKELQDLID-KKDIP 553

Query: 308 YLVGNIVEILEM--NPEDEAEEDGANIDLDSQ 397
            L   + E+  M  N  + A++  A  D  S+
Sbjct: 554 TLKAKLEEVENMMKNFANFAQQANATKDQSSK 585

to top

>TPM2_DROME (P09491) Tropomyosin-2 (Tropomyosin I)|
          Length = 284

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
 Frame = +2

Query: 131 ETDQLDSMSTEDIVRATRLLDNEVRVLKDELQRNNL----ELENVKDKIKENQEKIKLNK 298
           + +++D ++ +  ++  R+L  +     DE+ R       ELE  +D+++  + KI   +
Sbjct: 137 DEERMDQLTNQ--LKEARMLAEDADTKSDEVSRKLAFVEDELEVAEDRVRSGESKIMELE 194

Query: 299 QLPYLVGNIVEILEMNPE 352
           +   +VGN ++ LE++ E
Sbjct: 195 EELKVVGNSLKSLEVSEE 212

to top

>GBF1_ARATH (P42774) G-box-binding factor 1 (AtbZIP41)|
          Length = 315

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           E + +    L NE + L+DELQR + E + +K +    Q++++       L    V  LE
Sbjct: 248 EQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDELQ-----RVLGAEAVANLE 302

Query: 341 MNPEDEAEEDGAN 379
            N     + +G N
Sbjct: 303 QNAAGSKDGEGTN 315

to top

>FMT_LEPIN (Q8F3K6) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 315

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +2

Query: 164 DIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM 343
           D++  T   D  + +LK +    +LE+     K+K   +K  L +      G  +EILE+
Sbjct: 233 DMIATTTFRDKRMNILKTKPSSLSLEINPTPGKLKRLDKKRLLTQCGD---GRFLEILEL 289

Query: 344 NPEDE 358
            PE++
Sbjct: 290 QPENK 294

to top

>FMT_LEPIC (Q72S34) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 315

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +2

Query: 164 DIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEM 343
           D++  T   D  + +LK +    +LE+     K+K   +K  L +      G  +EILE+
Sbjct: 233 DMIATTTFRDKRMNILKTKPSSLSLEINPTPGKLKRLDKKRLLTQCGD---GRFLEILEL 289

Query: 344 NPEDE 358
            PE++
Sbjct: 290 QPENK 294

to top

>LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 (F37/Esophageal|
           cancer-related gene-coding leucine-zipper motif) (Fez1)
          Length = 598

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = +2

Query: 140 QLDSMS--TEDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIK-ENQEKIKLNKQ 301
           +LD M   T+D+  A R    E+ V ++ELQR   E E +++K+    QE ++L  Q
Sbjct: 422 KLDGMELKTQDLESALRTKGLELEVCENELQRKKNEAELLREKVNLLEQELMELRAQ 478

to top

>RESA_PLAFP (Q26005) Ring-infected erythrocyte surface antigen (Fragment)|
          Length = 304

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = +2

Query: 161 EDIVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           E++      ++  V    +E    N+E ENV++ ++EN E+++ N +      N+ E +E
Sbjct: 167 ENVEENVEEVEENVEENVEENVEENVE-ENVEENVEENVEEVEENVE-----ENVEENVE 220

Query: 341 MNPEDEAEED 370
            N E+  EE+
Sbjct: 221 ENVEENVEEN 230

to top

>ZYGBL_MOUSE (Q80ZJ6) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 779

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 257 DKIKENQEKIKLNKQLPYLVGNIVEILEMNPE 352
           D +KE  EK +L++ +  L+GN+ E+ E+ P+
Sbjct: 589 DCLKEFPEKQELHRNMLGLLGNVAEVKELRPQ 620

to top

>CINA_THEMA (Q9S5X1) CinA-like protein|
          Length = 408

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +2

Query: 191 DNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEED 370
           D   +VL   L+ N   L  +K+KIK+   +I  N +   LV +  E+L+ NP   A   
Sbjct: 80  DAVAKVLNRSLKLNEELLSKIKEKIKKYHSEIPQNIERQALVIDGAEVLD-NPVGSAPGQ 138

Query: 371 GANIDLDSQRKGKCVVL 421
              +D      GK V+L
Sbjct: 139 LLTVD------GKIVIL 149

to top

>MSP1_PLAFW (P04933) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P195)
          Length = 1639

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK+    + NI E++E
Sbjct: 212 NELDVLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKK---TIENINELIE 257

to top

>SYV_BUCAP (Q8K9I1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 960

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = +2

Query: 167  IVRATRLLDNEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVE 331
            +V   + +D E+     EL+R N E+E +K K+  +++K+     L Y   NI++
Sbjct: 876  LVPVLKAIDKEI-----ELKRLNKEIEKIKSKMLISEKKMSNQDFLSYAPKNIID 925

to top

>MSP1_PLAFK (P04932) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P190)
          Length = 1630

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK+    + NI E++E
Sbjct: 203 NELDVLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKK---TIENINELIE 248

to top

>HISZ_BACCR (Q81G08) ATP phosphoribosyltransferase regulatory subunit|
          Length = 420

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +2

Query: 167 IVRATRLLDNEVRVLKDELQ-RNNLELENV--KDKIKENQEKIKLNKQLPYLVGNIVEIL 337
           IV+   + D E RVL+  ++ +N   L N   + K+    E ++L ++LP L GN+ E++
Sbjct: 169 IVKKLSIQDEEERVLRTYIESKNYAALSNFIGEKKLDRCDETVRLLEKLPRLFGNL-EVI 227

Query: 338 E 340
           E
Sbjct: 228 E 228

to top

>RESA_PLAFF (P13830) Ring-infected erythrocyte surface antigen precursor|
          Length = 1073

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +2

Query: 215  DELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID 385
            +E    N+E ENV++ ++EN E+++ N +      N+ E +E N E+  EE+    D
Sbjct: 1010 EENVEENVE-ENVEENVEENVEEVEENVE-----ENVEENVEENVEENVEENVEEYD 1060

to top

>MSP1_PLAFM (P08569) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P190)
          Length = 1701

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK     + NI E++E
Sbjct: 206 NELDVLKKIVFGYRKPLDNIKDNVGKMEDYIKKNKT---TIANINELIE 251

to top

>MSP1_PLAFF (P13819) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA)
          Length = 1701

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK     + NI E++E
Sbjct: 206 NELDVLKKIVFGYRKPLDNIKDNVGKMEDYIKKNKT---TIANINELIE 251

to top

>MSP1_PLAFN (P13820) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (Fragment)
          Length = 281

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK     + NI E++E
Sbjct: 215 NELDVLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKT---TIANINELIE 260

to top

>GLMU_CARHZ (Q3AFM0) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 446

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
 Frame = +2

Query: 260 KIKENQEKIKLNKQLPYLV--GNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTST 433
           K +  Q++  L   +P L+  G +VE + +  +DE E  G N  +   R  K V  + + 
Sbjct: 184 KAENAQKEYYLTDVIPLLLERGKVVETITI--QDETEVYGVNDRVQLARLTKGVYRRKA- 240

Query: 434 RQTIFLPVIGLVDPDNLKPGDLVGVNRTAT*Y*TRYLQSMTL 559
            + +    + ++DP+ +  G+ V V      Y   YL+  T+
Sbjct: 241 -EALMQEGVTIIDPETVYIGEEVVVGSDTVIYPNTYLEGKTV 281

to top

>ZYGBL_PONPY (Q5RAG3) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 766

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 257 DKIKENQEKIKLNKQLPYLVGNIVEILEMNPE 352
           D +KE  EK +L++ +  L+GN+ E+ E+ P+
Sbjct: 576 DCLKEFPEKQELHRNMLGLLGNVAEVKELRPQ 607

to top

>ZYGBL_HUMAN (Q7Z7L7) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 766

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 257 DKIKENQEKIKLNKQLPYLVGNIVEILEMNPE 352
           D +KE  EK +L++ +  L+GN+ E+ E+ P+
Sbjct: 576 DCLKEFPEKQELHRNMLGLLGNVAEVKELRPQ 607

to top

>MSP1_PLAFP (P50495) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (GP195)
          Length = 1726

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK     + NI E++E
Sbjct: 239 NELDVLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKT---TIANINELIE 284

to top

>MSP1_PLAFC (P04934) Merozoite surface protein 1 precursor (Merozoite surface|
           antigens) (PMMSA) (P195)
          Length = 1726

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 194 NEVRVLKDELQRNNLELENVKDKIKENQEKIKLNKQLPYLVGNIVEILE 340
           NE+ VLK  +      L+N+KD + + ++ IK NK     + NI E++E
Sbjct: 239 NELDVLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKT---TIANINELIE 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,281,812
Number of Sequences: 219361
Number of extensions: 832092
Number of successful extensions: 4393
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 4096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4368
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result