ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart31c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ARR8_ARATH (O80365) Two-component response regulator ARR8 (Respo... 173 4e-43
2ARR9_ARATH (O80366) Two-component response regulator ARR9 (Respo... 173 4e-43
3ARR17_ARATH (Q9FPR6) Two-component response regulator ARR17 132 7e-31
4ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3 132 9e-31
5ARR5_ARATH (Q9SB04) Two-component response regulator ARR5 (Respo... 129 8e-30
6ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6 129 8e-30
7ARR4_ARATH (O82798) Two-component response regulator ARR4 (Respo... 129 8e-30
8ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7 127 2e-29
9ARR15_ARATH (Q7G8V2) Two-component response regulator ARR15 127 2e-29
10ARR16_ARATH (Q9SHC2) Two-component response regulator ARR16 126 4e-29
11PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37... 57 4e-08
12APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3... 57 5e-08
13APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5... 56 8e-08
14REGA_DICDI (Q23917) 3',5'-cyclic-nucleotide phosphodiesterase re... 54 3e-07
15PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73... 54 3e-07
16APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7... 52 2e-06
17FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.... 51 2e-06
18RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3) 51 2e-06
19RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3) 51 2e-06
20ARR21_ARATH (Q9LYP5) Putative two-component response regulator A... 51 3e-06
21ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Rec... 51 3e-06
22APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9... 51 3e-06
23ARR12_ARATH (P62598) Two-component response regulator ARR12 49 8e-06
24CHEY_PSEAE (Q51455) Chemotaxis protein cheY 48 2e-05
25CHEY_HELPY (P71403) Chemotaxis protein cheY homolog 48 2e-05
26PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95... 47 4e-05
27CHEY_HELPJ (Q9ZM64) Chemotaxis protein cheY homolog 47 4e-05
28YCF27_GUITH (O78428) Probable transcriptional regulator ycf27 (O... 46 6e-05
29PLED_CAUCR (Q9A5I5) Response regulator pleD (Stalked cell differ... 46 6e-05
30RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular ... 46 8e-05
31RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular ... 46 8e-05
32ARR10_ARATH (O49397) Two-component response regulator ARR10 (Rec... 45 1e-04
33RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Ca... 45 1e-04
34ARR1_ARATH (Q940D0) Two-component response regulator ARR1 45 2e-04
35APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1... 44 2e-04
36CHEY_CAMJE (P71129) Chemotaxis protein cheY homolog 44 3e-04
37PHOB_PSEAE (P23620) Phosphate regulon transcriptional regulatory... 44 4e-04
38YCF27_CYAPA (P48259) Probable transcriptional regulator ycf27 (O... 43 5e-04
39ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14 43 5e-04
40ARR13_ARATH (Q9ZVD3) Putative two-component response regulator A... 42 0.001
41CHEY_SALTY (P0A2D5) Chemotaxis protein cheY 42 0.001
42CHEY_SALTI (P0A2D6) Chemotaxis protein cheY 42 0.001
43YCF27_CYACA (Q9TLQ4) Probable transcriptional regulator ycf27 (O... 42 0.001
44ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Recei... 42 0.001
45YKOG_BACSU (O34903) Hypothetical sensory transduction protein ykoG 42 0.002
46AFSQ1_STRCO (Q04942) Transcriptional regulatory protein afsQ1 42 0.002
47Y2151_LEPIN (P24086) Hypothetical protein LA_2151 (ORF 2) 41 0.002
48Y1769_LEPIC (Q72RH6) Hypothetical protein LIC_11769 41 0.002
49CHEY_YEREN (Q93P00) Chemotaxis protein cheY 41 0.003
50PILG_PSEAE (P46384) Protein pilG 41 0.003
51RCP1_SYNY3 (Q55169) Response regulator rcp1 41 0.003
52CHEY_YERPE (Q8D0P1) Chemotaxis protein cheY 40 0.004
53ARR19_ARATH (Q9M9B9) Putative two-component response regulator A... 40 0.004
54PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory... 40 0.004
55PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory... 40 0.004
56PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory... 40 0.004
57PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory... 40 0.004
58CHEY_SHIFL (P0AE69) Chemotaxis protein cheY 40 0.005
59CHEY_ENTCL (Q9FAD7) Chemotaxis protein cheY 40 0.005
60CHEY_ECOLI (P0AE67) Chemotaxis protein cheY 40 0.005
61CHEY_ECOL6 (Q8FGP6) Chemotaxis protein cheY 40 0.005
62CHEY_ECO57 (P0AE68) Chemotaxis protein cheY 40 0.005
63NTRC_RHIME (P10577) Nitrogen assimilation regulatory protein 40 0.006
64RPFG_XANC8 (Q4UU85) Response regulator rpfG 39 0.008
65NTRC_BRASR (P10576) Nitrogen assimilation regulatory protein 39 0.010
66PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory... 39 0.014
67CHEV_BACSU (P37599) Chemotaxis protein cheV 38 0.018
68PHOB_HAEIN (P45189) Phosphate regulon transcriptional regulatory... 38 0.018
69PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1 (... 38 0.018
70PHOB_RHIME (Q52990) Phosphate regulon transcriptional regulatory... 38 0.023
71YCF27_PORAE (P28835) Probable transcriptional regulator ycf27 (O... 37 0.030
72NTRC_AZOBR (P45671) Nitrogen assimilation regulatory protein 37 0.030
73ARR20_ARATH (Q9LZJ8) Putative two-component response regulator A... 37 0.030
74CTRA_CAUCR (Q45994) Cell cycle transcriptional regulator ctrA (R... 37 0.039
75LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN... 37 0.039
76YCF27_PORPU (P51358) Probable transcriptional regulator ycf27 (O... 37 0.051
77YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (O... 37 0.051
78CYAB_STIAU (P40138) Adenylate cyclase 2 (EC 4.6.1.1) (ATP pyroph... 36 0.088
79NTRC_KLEPN (P03029) Nitrogen assimilation regulatory protein 35 0.11
80BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC ... 35 0.15
81REGX3_MYCSM (Q9F868) Sensory transduction protein regX3 34 0.26
82CHEB_BACSU (Q05522) Chemotaxis response regulator protein-glutam... 34 0.26
83BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC ... 34 0.26
84BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC ... 34 0.26
85HNR_SHIFL (P0AEV3) Protein hnr 34 0.33
86HNR_ECOLI (P0AEV1) Protein hnr 34 0.33
87HNR_ECO57 (P0AEV2) Protein hnr 34 0.33
88YCF29_PORPU (P51343) Probable transcriptional regulator ycf29 34 0.33
89REGX3_MYCTU (Q11156) Sensory transduction protein regX3 34 0.33
90REGX3_MYCBO (O07130) Sensory transduction protein regX3 34 0.33
91ZRAR_KLEOX (Q9APD9) Transcriptional regulatory protein zraR 33 0.44
92ZRAR_ECOLI (P14375) Transcriptional regulatory protein zraR 33 0.44
93YYCF_BACSU (P37478) Transcriptional regulatory protein yycF 33 0.57
94MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase m... 33 0.57
95YCF29_CYAPA (P48359) Probable transcriptional regulator ycf29 33 0.57
96FIMZ_SALTY (P26319) Fimbriae Z protein 33 0.57
97FIMZ_ECOLI (P0AEL8) Fimbriae Z protein 33 0.57
98FIMZ_ECO57 (P0AEL9) Fimbriae Z protein 33 0.57
99ZRAR_ECO57 (Q8X613) Transcriptional regulatory protein zraR 33 0.57
100EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3) 33 0.57
101CHEB_BACHD (Q9KA55) Chemotaxis response regulator protein-glutam... 33 0.74
102VIRG_AGRTU (Q44444) Regulatory protein virG 33 0.74
103VIRG_AGRT9 (P62722) Regulatory protein virG 33 0.74
104COPR_PSESM (Q02540) Transcriptional activator protein copR 33 0.74
105YFHA_ECOLI (P0AFU4) Hypothetical protein yfhA (ORF-2) 32 0.97
106YFHA_ECO57 (P0AFU5) Hypothetical protein yfhA 32 0.97
107ARCA_SHIFL (P0A9Q4) Aerobic respiration control protein arcA 32 0.97
108ARCA_ECOLI (P0A9Q1) Aerobic respiration control protein arcA (Dy... 32 0.97
109ARCA_ECOL6 (P0A9Q2) Aerobic respiration control protein arcA 32 0.97
110ARCA_ECO57 (P0A9Q3) Aerobic respiration control protein arcA 32 0.97
111VANR_ENTFA (Q47744) Regulatory protein vanRB 32 1.3
112YPH5_THIVI (P45365) Hypothetical 76.5 kDa protein in phbC 3'regi... 32 1.3
113REGX3_MYCLE (P54884) Sensory transduction protein regX3 32 1.3
114PILH_PSEAE (P43501) Protein pilH 32 1.7
115ARCA_HAEIN (P44918) Aerobic respiration control protein arcA hom... 32 1.7
116BARA_SHIFL (P59342) Signal transduction histidine-protein kinase... 32 1.7
117EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3) 32 1.7
118ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18 32 1.7
119SP0F_BACSU (P06628) Sporulation initiation phosphotransferase F ... 31 2.2
120BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase... 31 2.2
121BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase... 31 2.2
122BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase... 31 2.2
123LYTT_OCEIH (Q8EQQ3) Sensory transduction protein lytT 31 2.2
124QSEB_SALTY (P66795) Transcriptional regulatory protein qseB 31 2.2
125QSEB_SALTI (P66796) Transcriptional regulatory protein qseB 31 2.2
126CUSR_ECOLI (P0ACZ8) Transcriptional regulatory protein cusR 31 2.2
127CUSR_ECOL6 (P0ACZ9) Transcriptional regulatory protein cusR 31 2.2
128CUSR_ECO57 (P0AD00) Transcriptional regulatory protein cusR 31 2.2
129YEDW_ECOLI (P76340) Probable transcriptional regulatory protein ... 31 2.2
130ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3) 31 2.8
131DCTD_RHILE (P10046) C4-dicarboxylate transport transcriptional r... 31 2.8
132BCER_BACSU (O34951) Sensory transduction protein bceR 30 3.7
133BCER_BACHD (Q9K621) Sensory transduction protein bceR 30 3.7
134QSEB_ECOLI (P52076) Transcriptional regulatory protein qseB 30 4.8
135YPH2_SYNP2 (P32040) Hypothetical protein in petH 3'region (Fragm... 30 6.3
136CHEY_THEMA (Q56312) Chemotaxis protein cheY 30 6.3
137YCLJ_BACSU (P94413) Hypothetical sensory transduction protein yclJ 30 6.3
138FIXJ_RHIME (P10958) Transcriptional regulatory protein fixJ 29 8.2 
>ARR8_ARATH (O80365) Two-component response regulator ARR8 (Response reactor 3)|
          Length = 225

 Score =  173 bits (438), Expect = 4e-43
 Identities = 90/133 (67%), Positives = 105/133 (78%)
 Frame = +3

Query: 171 VVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXX 350
           V++ ES+FHVLAVDDS+ DRK+IE LL+ SS QVTTVDSGSKALE LGLR +D       
Sbjct: 2   VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALS 61

Query: 351 XXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPA 530
                   +P  HQEV +NLIITDYCMPGMTGYDLL++VK S++ + IPVVIMSSENVPA
Sbjct: 62  T-------SPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPA 114

Query: 531 RISRCLEDGAEEF 569
           RISRCLE+GAEEF
Sbjct: 115 RISRCLEEGAEEF 127
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>ARR9_ARATH (O80366) Two-component response regulator ARR9 (Response reactor 4)|
          Length = 234

 Score =  173 bits (438), Expect = 4e-43
 Identities = 93/130 (71%), Positives = 102/130 (78%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXX 359
           AES+FHVLAVDDS+ DRKLIE LL+ SS QVTTVDSGSKALE LGLR             
Sbjct: 5   AESQFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQS-----TDSNDP 59

Query: 360 XXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARIS 539
                AP +HQ V VNLIITDYCMPGMTGYDLL++VK SS+ +DIPVVIMSSENVPARIS
Sbjct: 60  NAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARIS 119

Query: 540 RCLEDGAEEF 569
           RCLE+GAEEF
Sbjct: 120 RCLEEGAEEF 129
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>ARR17_ARATH (Q9FPR6) Two-component response regulator ARR17|
          Length = 153

 Score =  132 bits (332), Expect = 7e-31
 Identities = 68/129 (52%), Positives = 89/129 (68%)
 Frame = +3

Query: 183 ESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXX 362
           E   HVLAVDD++IDRKL+E +LK SS +VTT ++G +ALE LGL D             
Sbjct: 17  EEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNV--- 73

Query: 363 XXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISR 542
                      + VNLIITDYCMPGMTG++LL++VK SS+LK++PVVI+SSEN+P RI++
Sbjct: 74  -----------MKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINK 122

Query: 543 CLEDGAEEF 569
           CL  GA+ F
Sbjct: 123 CLASGAQMF 131
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>ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3|
          Length = 231

 Score =  132 bits (331), Expect = 9e-31
 Identities = 70/125 (56%), Positives = 89/125 (71%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL D+                
Sbjct: 34  HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDK--------------- 78

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
           A      + V+LIITDYCMPGMTGY+LL+++K S+S K++PVVIMSSENV  RI RCLE+
Sbjct: 79  AAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEE 138

Query: 555 GAEEF 569
           GAE+F
Sbjct: 139 GAEDF 143
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>ARR5_ARATH (Q9SB04) Two-component response regulator ARR5 (Response reactor 2)|
          Length = 184

 Score =  129 bits (323), Expect = 8e-30
 Identities = 66/125 (52%), Positives = 89/125 (71%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           HVLAVDDS++DRK IE LL+ SS +VT VDS ++AL+ LGL  E+               
Sbjct: 26  HVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGF--------- 76

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                +++ +NLI+TDY MPGMTGY+LL+++K SS+ ++IPVVIMSSEN+  RI RCLE+
Sbjct: 77  -----EDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEE 131

Query: 555 GAEEF 569
           GAE+F
Sbjct: 132 GAEDF 136
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>ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6|
          Length = 186

 Score =  129 bits (323), Expect = 8e-30
 Identities = 70/143 (48%), Positives = 96/143 (67%), Gaps = 6/143 (4%)
 Frame = +3

Query: 159 RAMTVVDAESRF------HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLR 320
           R M +++  S+F      HVLAVDDS +DRK IE LL+ SS +VT VDS ++AL+ LGL 
Sbjct: 8   RKMEILNHSSKFGSPDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLD 67

Query: 321 DEDXXXXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPV 500
            E+                    +++ VNLI+TDY MPGMTGY+LL+++K SS+ +++PV
Sbjct: 68  VEEKSVGF---------------EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPV 112

Query: 501 VIMSSENVPARISRCLEDGAEEF 569
           VIMSSEN+  RI RCLE+GAE+F
Sbjct: 113 VIMSSENILPRIDRCLEEGAEDF 135
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>ARR4_ARATH (O82798) Two-component response regulator ARR4 (Response regulator|
           1)
          Length = 259

 Score =  129 bits (323), Expect = 8e-30
 Identities = 68/125 (54%), Positives = 89/125 (71%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           HVLAVDDS++DR +IE LL+ +S +VT VDSG +ALE LGL +E                
Sbjct: 35  HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEK--------------- 79

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
           A      + V+LIITDYCMPGMTGY+LL+++K SS+ +++PVVIMSSENV  RI RCLE+
Sbjct: 80  ASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEE 139

Query: 555 GAEEF 569
           GA++F
Sbjct: 140 GAQDF 144
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>ARR7_ARATH (Q9ZWS7) Two-component response regulator ARR7|
          Length = 206

 Score =  127 bits (320), Expect = 2e-29
 Identities = 68/138 (49%), Positives = 95/138 (68%)
 Frame = +3

Query: 156 GRAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXX 335
           G  +TV   E   HVLAVDDS++DRK+IE LL+ SS +VTTV+SG++AL+ LGL      
Sbjct: 14  GGDLTVTTPE--LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL------ 65

Query: 336 XXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS 515
                           + +++ VNLI+TDY MPG++GYDLL+++K SS+ +++PVVIMSS
Sbjct: 66  ---------DGGKGASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSS 116

Query: 516 ENVPARISRCLEDGAEEF 569
           EN+  RI  CL++GAEEF
Sbjct: 117 ENILPRIQECLKEGAEEF 134
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>ARR15_ARATH (Q7G8V2) Two-component response regulator ARR15|
          Length = 206

 Score =  127 bits (319), Expect = 2e-29
 Identities = 65/125 (52%), Positives = 91/125 (72%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           HVLAVDDS +DRK+IE LLK S+ +VTTV+SG++AL+ LGL  ++               
Sbjct: 19  HVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGL---------- 68

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                +++ VNLI+TDY MPG+TGY+LL+++K SS+L++IPVVIMSSEN+  RI +C+ +
Sbjct: 69  -----KDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIE 123

Query: 555 GAEEF 569
           GAEEF
Sbjct: 124 GAEEF 128
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>ARR16_ARATH (Q9SHC2) Two-component response regulator ARR16|
          Length = 164

 Score =  126 bits (317), Expect = 4e-29
 Identities = 65/129 (50%), Positives = 89/129 (68%)
 Frame = +3

Query: 183 ESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXX 362
           +   HVLAVDD++IDRKL+E LLK S  +VTT ++  +ALE LGL D++           
Sbjct: 26  DEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNV- 84

Query: 363 XXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISR 542
                      + V+LIITDYCMPGMTG++LL++VK SS+L+++PVVIMSSEN+P RI++
Sbjct: 85  -----------MKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINK 133

Query: 543 CLEDGAEEF 569
           CL  GA+ F
Sbjct: 134 CLASGAQMF 142
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>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37|
           (Pseudo-response regulator 37) (OsPRR37)
          Length = 742

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 35/124 (28%), Positives = 60/124 (48%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL VD     R+++  LL+   Y+V   ++G +A   L    ED                
Sbjct: 64  VLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL----ED---------------- 103

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                +  ++L++T+  MPG++G  LL R+   +  K+IPV++MSS +    + +CL  G
Sbjct: 104 ----MQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKG 159

Query: 558 AEEF 569
           A +F
Sbjct: 160 AVDF 163
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>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3|
           (Pseudo-response regulator 3)
          Length = 495

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 42/144 (29%), Positives = 71/144 (49%)
 Frame = +3

Query: 138 WLFFLPGRAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGL 317
           W  +LP R++ V+  E+       DDS   R ++  LLK  SY+VT V    +A  +L  
Sbjct: 55  WERYLPVRSLKVLLVEN-------DDST--RHIVTALLKNCSYEVTAVPDVLEAWRIL-- 103

Query: 318 RDEDXXXXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIP 497
             ED                    ++  ++L++T+  MP  +G  LL ++    +LK+IP
Sbjct: 104 --ED--------------------EKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIP 141

Query: 498 VVIMSSENVPARISRCLEDGAEEF 569
           V++MSS +    + +CL +GA +F
Sbjct: 142 VIMMSSHDSMVLVFKCLSNGAVDF 165
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>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5|
           (Pseudo-response regulator 5)
          Length = 558

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 42/144 (29%), Positives = 69/144 (47%)
 Frame = +3

Query: 138 WLFFLPGRAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGL 317
           W  FLP  A+ V+  E+       DDS   R++I  LL+  SY+V  V  G KA E+L  
Sbjct: 41  WERFLPKIALRVLLVEA-------DDST--RQIIAALLRKCSYRVAAVPDGLKAWEMLKG 91

Query: 318 RDEDXXXXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIP 497
           + E                         V+LI+T+  +P ++GY LL  +      K+IP
Sbjct: 92  KPES------------------------VDLILTEVDLPSISGYALLTLIMEHDICKNIP 127

Query: 498 VVIMSSENVPARISRCLEDGAEEF 569
           V++MS+++    + +C+  GA ++
Sbjct: 128 VIMMSTQDSVNTVYKCMLKGAADY 151
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>REGA_DICDI (Q23917) 3',5'-cyclic-nucleotide phosphodiesterase regA (EC|
           3.1.4.17) (PDEase regA)
          Length = 793

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
 Frame = +3

Query: 186 SRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXX 365
           S+  +L  DD  + RK++  LLK   Y VT V +G  A E +    +             
Sbjct: 158 SKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKY----------- 206

Query: 366 XXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISR- 542
                        +L++TD  MP +TG+DLL+R+      + IPV++MS   V  + +  
Sbjct: 207 -------------DLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYAND 253

Query: 543 CLEDGAEEF 569
            ++ G ++F
Sbjct: 254 TIKIGGQDF 262
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>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73|
           (Pseudo-response regulator 73) (OsPRR73)
          Length = 767

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 40/144 (27%), Positives = 68/144 (47%)
 Frame = +3

Query: 138 WLFFLPGRAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGL 317
           W  FLP + + V+  E+       DDS   R+++  LL+   Y+V   ++G  A + L  
Sbjct: 72  WERFLPVKTLRVLLVEN-------DDST--RQVVSALLRKCCYEVIPAENGLHAWQCL-- 120

Query: 318 RDEDXXXXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIP 497
             ED                  +H    ++L++T+  MP ++G  LL ++      KDIP
Sbjct: 121 --EDL----------------QNH----IDLVLTEVVMPRLSGIGLLSKITSHKICKDIP 158

Query: 498 VVIMSSENVPARISRCLEDGAEEF 569
           V++MSS +    + +CL  GA +F
Sbjct: 159 VIMMSSNDSMGTVFKCLSKGAVDF 182
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>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7|
           (Pseudo-response regulator 7)
          Length = 727

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 34/124 (27%), Positives = 63/124 (50%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL V++    R ++  LL+  SY+V    +G +A +VL    ED                
Sbjct: 80  VLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVL----EDL--------------- 120

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
            ++H    +++++T+  MP ++G  LL ++    S ++IPV++MSS +    + +CL  G
Sbjct: 121 -NNH----IDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKG 175

Query: 558 AEEF 569
           A +F
Sbjct: 176 AVDF 179
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>FRZE_MYXXA (P18769) Gliding motility regulatory protein (EC 2.7.13.3)|
          Length = 777

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 40/137 (29%), Positives = 58/137 (42%)
 Frame = +3

Query: 159 RAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXX 338
           R +T   A  R  VL VDDS I R     L+K   + V     G +A   +         
Sbjct: 648 RPVTQAPAAKRLRVLLVDDSPIARATEGALVKALGHSVEEAQDGEEAYVKV--------- 698

Query: 339 XXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSE 518
                            Q    +LI+TD  MP + G+ L RR+K + ++  IPV+I+SS 
Sbjct: 699 -----------------QNNTYDLILTDVQMPKLDGFSLARRLKSTPAVARIPVIILSSL 741

Query: 519 NVPARISRCLEDGAEEF 569
             P    R L+ GA+ +
Sbjct: 742 ASPEDKRRGLDAGADAY 758
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>RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3)|
          Length = 677

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L  DD   +R +++ LL+ + ++V  V+   + L+ +   D D                
Sbjct: 415 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDA--------------- 459

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLR--RVKGSSSLKDIPVVIMSSENVPARISRCLE 551
                      +I D  MPGM G D+L+  RV  +S ++  PVV++S++  P  I  C +
Sbjct: 460 -----------VIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQ 508

Query: 552 DGAEEF 569
            GA  F
Sbjct: 509 AGARAF 514
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>RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3)|
          Length = 677

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L  DD   +R +++ LL+ + ++V  V+   + L+ +   D D                
Sbjct: 415 MLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDA--------------- 459

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLR--RVKGSSSLKDIPVVIMSSENVPARISRCLE 551
                      +I D  MPGM G D+L+  RV  +S ++  PVV++S++  P  I  C +
Sbjct: 460 -----------VIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQ 508

Query: 552 DGAEEF 569
            GA  F
Sbjct: 509 AGARAF 514
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>ARR21_ARATH (Q9LYP5) Putative two-component response regulator ARR21|
          Length = 592

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 31/110 (28%), Positives = 55/110 (50%)
 Frame = +3

Query: 189 RFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXX 368
           + +V+ VDD  +   ++  +L+ S Y+V  VD   KAL  L ++ ++             
Sbjct: 15  KINVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDN------------- 61

Query: 369 XXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSE 518
                      ++LIITDY MPGM G  L +++  +    ++PV++MSS+
Sbjct: 62  -----------IDLIITDYYMPGMNGLQLKKQI--TQEFGNLPVLVMSSD 98
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>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like|
           protein 3)
          Length = 521

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 36/124 (29%), Positives = 59/124 (47%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL VDD     K++E +LK  SY+VTT     +AL +L  R +                 
Sbjct: 13  VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKD----------------- 55

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                  G +++I+D  MP M G+ LL  V       D+PV++MS +   +R+ + ++ G
Sbjct: 56  -------GYDIVISDVNMPDMDGFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHG 105

Query: 558 AEEF 569
           A ++
Sbjct: 106 ACDY 109
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>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 33/124 (26%), Positives = 59/124 (47%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL V+     R++I  LL+   Y+V  V  G  A EVL  +  +                
Sbjct: 39  VLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHN---------------- 82

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                   ++LI+T+  +P ++G+ LL  V    + K+IPV++MSS++    + +C+  G
Sbjct: 83  --------IDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRG 134

Query: 558 AEEF 569
           A ++
Sbjct: 135 AADY 138
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>ARR12_ARATH (P62598) Two-component response regulator ARR12|
          Length = 596

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 36/124 (29%), Positives = 57/124 (45%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VLAVDD     K++E LL+   Y VTT +   KALE+L                      
Sbjct: 19  VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELL---------------------- 56

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                +   +L+I+D  MP M G+ LL  V       D+PV+++S+ + P  + + +  G
Sbjct: 57  --RENKNKFDLVISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHG 111

Query: 558 AEEF 569
           A ++
Sbjct: 112 ACDY 115
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>CHEY_PSEAE (Q51455) Chemotaxis protein cheY|
          Length = 124

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTT-VDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           +L VDD    R++I+ LL+   +  T   D G+ AL +L   + D               
Sbjct: 3   ILIVDDFSTMRRIIKNLLRDLGFTNTAEADDGTTALPMLHSGNFD--------------- 47

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                       ++TD+ MPGMTG DLLR V+    LK +PV+++++E    +I    + 
Sbjct: 48  -----------FLVTDWNMPGMTGIDLLRAVRADERLKHLPVLMVTAEAKRDQIIEAAQA 96

Query: 555 GAEEF 569
           G   +
Sbjct: 97  GVNGY 101
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>CHEY_HELPY (P71403) Chemotaxis protein cheY homolog|
          Length = 124

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           +L VDDS   R++I+  L    Y+ V   + G +A E L    +                
Sbjct: 3   LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANAD---------------- 46

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                      ++ITD+ MP M G DL+++V+  S  K+IP++++++E   A +   L+ 
Sbjct: 47  ---------TKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITTEGGKAEVITALKA 97

Query: 555 GAEEF 569
           G   +
Sbjct: 98  GVNNY 102
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>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95|
           (Pseudo-response regulator 95) (OsPRR95)
          Length = 623

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 31/120 (25%), Positives = 56/120 (46%)
 Frame = +3

Query: 210 DDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXAPDHH 389
           DDS   R +I  LL+   Y+V     G KA ++L                          
Sbjct: 51  DDST--RHIICALLRKCGYRVAAASDGVKAWDIL------------------------KE 84

Query: 390 QEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +   ++L++T+  +P M+G+ LL  +    + K+IPV++MSS +  + + +C+  GA +F
Sbjct: 85  KSFNIDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADF 144
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>CHEY_HELPJ (Q9ZM64) Chemotaxis protein cheY homolog|
          Length = 124

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           +L VDDS   R++I+  L    Y+ V   + G +A E L    +                
Sbjct: 3   LLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANAD---------------- 46

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                      ++ITD+ MP M G DL+++V+  +  K+IP++++++E   A +   L+ 
Sbjct: 47  ---------TKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKA 97

Query: 555 GAEEF 569
           G   +
Sbjct: 98  GVNNY 102
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>YCF27_GUITH (O78428) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 254

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 34/132 (25%), Positives = 60/132 (45%)
 Frame = +3

Query: 174 VDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXX 353
           +D E++  VL VDD    RK++E  L    Y V T   G +AL +               
Sbjct: 9   IDLETKEKVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLF-------------- 54

Query: 354 XXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPAR 533
                      HQE+  +++I D  MP + GY + + ++  S   D+P++++++    A 
Sbjct: 55  -----------HQEM-PDVVILDIMMPKLDGYGVCQEIRKDS---DVPIIMLTALGDVAD 99

Query: 534 ISRCLEDGAEEF 569
               LE GA+++
Sbjct: 100 RITGLELGADDY 111
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>PLED_CAUCR (Q9A5I5) Response regulator pleD (Stalked cell|
           differentiation-controlling protein) [Includes:
           Diguanylate cyclase (EC 4.6.1.-) (DGC)]
          Length = 454

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 35/124 (28%), Positives = 57/124 (45%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD   + +L+E  L    Y+V+T   G  AL  +  RD                  
Sbjct: 5   ILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTAL-AMAARD-----------------L 46

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
           PD        +I+ D  MPGM G+ + R++K   + + IPVV++++ +      + LE G
Sbjct: 47  PD--------IILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESG 98

Query: 558 AEEF 569
           A +F
Sbjct: 99  ASDF 102
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>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis|
            regulator component C)
          Length = 948

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 33/129 (25%), Positives = 56/129 (43%)
 Frame = +3

Query: 177  DAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
            D+     +L VDD  I+R+L+   L +  YQ  T + G  AL VL               
Sbjct: 820  DSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL--------------- 864

Query: 357  XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                        +  ++++++D  MP M GY L +R++       +PVV +++  +    
Sbjct: 865  -----------SKNAIDIVLSDVNMPNMDGYRLTQRIRQLG--LTLPVVGVTANALAEEK 911

Query: 537  SRCLEDGAE 563
             RCLE G +
Sbjct: 912  QRCLESGMD 920
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>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis|
            regulator component C)
          Length = 948

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 33/129 (25%), Positives = 56/129 (43%)
 Frame = +3

Query: 177  DAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
            D+     +L VDD  I+R+L+   L +  YQ  T + G  AL VL               
Sbjct: 820  DSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL--------------- 864

Query: 357  XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                        +  ++++++D  MP M GY L +R++       +PVV +++  +    
Sbjct: 865  -----------SKNAIDIVLSDVNMPNMDGYRLTQRIRQLG--LTLPVVGVTANALAEEK 911

Query: 537  SRCLEDGAE 563
             RCLE G +
Sbjct: 912  QRCLESGMD 920
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>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like|
           protein 4)
          Length = 552

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 33/124 (26%), Positives = 57/124 (45%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VLAVDD     ++++ LL+   Y VTT +    ALE+L                      
Sbjct: 19  VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELL---------------------- 56

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                +   +L+I+D  MP M G+ LL  V       D+PV+++S+ + P  + + ++ G
Sbjct: 57  --RENKNKFDLVISDVDMPDMDGFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHG 111

Query: 558 AEEF 569
           A ++
Sbjct: 112 ACDY 115
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>RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Capsular synthesis|
            regulator component C)
          Length = 949

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 36/138 (26%), Positives = 61/138 (44%)
 Frame = +3

Query: 150  LPGRAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDED 329
            LP     V D +    +L VDD  I+R+L+   L +  YQ  T + G  AL VL      
Sbjct: 812  LPSTDKAVSDNDDMM-ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL------ 864

Query: 330  XXXXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIM 509
                           + +H     ++++++D  MP M GY L +R++       +PV+ +
Sbjct: 865  ---------------SKNH-----IDIVLSDVNMPNMDGYRLTQRIRQLG--LTLPVIGV 902

Query: 510  SSENVPARISRCLEDGAE 563
            ++  +     RCLE G +
Sbjct: 903  TANALAEEKQRCLESGMD 920
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>ARR1_ARATH (Q940D0) Two-component response regulator ARR1|
          Length = 690

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
 Frame = +3

Query: 156 GRAMTVVDA-ESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDX 332
           G   TVV+   S   VL VDD      ++E +L+T  Y+VT  +    AL +L       
Sbjct: 24  GGGETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL------- 76

Query: 333 XXXXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMS 512
                               + G +++I+D  MP M G+ LL  V       D+PV++MS
Sbjct: 77  -----------------RKNKHGFDIVISDVHMPDMDGFKLLEHV---GLEMDLPVIMMS 116

Query: 513 SENVPARISRCLEDGAEEF 569
           +++  + + + +  GA ++
Sbjct: 117 ADDSKSVVLKGVTHGAVDY 135
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>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1|
           (Pseudo-response regulator 1) (Timing of CAB expression
           1) (ABI3-interacting protein 1)
          Length = 618

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 30/128 (23%), Positives = 54/128 (42%)
 Frame = +3

Query: 186 SRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXX 365
           SR  +L  D+       +  LL   SYQVT V S  + ++ L     D            
Sbjct: 17  SRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPD------------ 64

Query: 366 XXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRC 545
                       +++I+ +  +P   G  +LR +     L+ IPV++MS ++    + +C
Sbjct: 65  ------------IDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKC 112

Query: 546 LEDGAEEF 569
           L+ GA ++
Sbjct: 113 LKLGAADY 120
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>CHEY_CAMJE (P71129) Chemotaxis protein cheY homolog|
          Length = 130

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           +L VDDS   R++I+  L    +  V   + G +A ++L  ++ED               
Sbjct: 3   LLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLL-TKNED--------------- 46

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                    V ++ITD+ MP M G +L+++V+     +D+P++++++E   A +   L+ 
Sbjct: 47  ---------VKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKA 97

Query: 555 GAEEF 569
           G   +
Sbjct: 98  GVNNY 102
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>PHOB_PSEAE (P23620) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 29/124 (23%), Positives = 57/124 (45%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD    R++I + L+ + Y+    ++  +A  V+  R  D                
Sbjct: 6   ILIVDDEAPIREMIAVALEMAGYECLEAENTQQAHAVIVDRKPD---------------- 49

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                     LI+ D+ +PG +G +L RR+K      DIP+++++++       + LE G
Sbjct: 50  ----------LILLDWMLPGTSGIELARRLKRDELTVDIPIIMLTAKGEEDNKIQGLEVG 99

Query: 558 AEEF 569
           A+++
Sbjct: 100 ADDY 103
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>YCF27_CYAPA (P48259) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 239

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 30/124 (24%), Positives = 54/124 (43%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD +  R+++E  L    Y+V T   G +AL +  L                    
Sbjct: 8   ILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLEHP----------------- 50

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                    NL++ D  MP + GY + + ++  S   DIP++++++    A     LE G
Sbjct: 51  ---------NLVVLDVMMPKLDGYGVCQELRKES---DIPIIMLTALGDVADRITGLELG 98

Query: 558 AEEF 569
           A+++
Sbjct: 99  ADDY 102
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>ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14|
          Length = 382

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 34/128 (26%), Positives = 56/128 (43%)
 Frame = +3

Query: 186 SRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXX 365
           S   +L VDD      ++E +L    YQVT       AL +L  R +             
Sbjct: 9   SGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSF----------- 57

Query: 366 XXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRC 545
                        +L+++D  MPGM GY+LL++V G   + D+PV++MS +     +   
Sbjct: 58  -------------DLVLSDVHMPGMNGYNLLQQV-GLLEM-DLPVIMMSVDGRTTTVMTG 102

Query: 546 LEDGAEEF 569
           +  GA ++
Sbjct: 103 INHGACDY 110
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>ARR13_ARATH (Q9ZVD3) Putative two-component response regulator ARR13|
          Length = 572

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
 Frame = +3

Query: 189 RFHVLAVDDSVIDRKLIEMLLKTSSYQ---VTTVDSGSKALEVLGLRDEDXXXXXXXXXX 359
           + +V+ VDD+ +   +   +L+ S Y+   V  VD   KAL  L                
Sbjct: 15  KINVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTL---------------- 58

Query: 360 XXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARIS 539
                    +Q   ++LIITDY MPGM G  L +++  +    ++ V++MSS+  P +  
Sbjct: 59  --------KNQRDNIDLIITDYYMPGMNGLQLKKQI--TQEFGNLSVLVMSSD--PNKEE 106

Query: 540 RCLEDGAEEF 569
             L  GA  F
Sbjct: 107 ESLSCGAMGF 116
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>CHEY_SALTY (P0A2D5) Chemotaxis protein cheY|
          Length = 128

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   II+D+ MP M G +LL+ ++  S++  +PV+++++E     I
Sbjct: 46  -----------QAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>CHEY_SALTI (P0A2D6) Chemotaxis protein cheY|
          Length = 128

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   II+D+ MP M G +LL+ ++  S++  +PV+++++E     I
Sbjct: 46  -----------QAGGFGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>YCF27_CYACA (Q9TLQ4) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 249

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           H+L VDD    RK+++  L    Y V+T  +G +AL++                      
Sbjct: 13  HLLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFTTH------------------ 54

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS-ENVPARISRCLE 551
                    ++LII D  MP + GY + + ++  S   DIP++++++ E+V  +++  LE
Sbjct: 55  --------SIDLIILDVMMPKLDGYGVCQEIRKES---DIPIIMLTALEDVLDKVTG-LE 102

Query: 552 DGAEEF 569
            GA+++
Sbjct: 103 LGADDY 108
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>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like|
           protein 5)
          Length = 664

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 31/128 (24%), Positives = 56/128 (43%)
 Frame = +3

Query: 186 SRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXX 365
           +   VL VDD      ++E +L T  Y+VT  +    AL +L                  
Sbjct: 26  ANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL------------------ 67

Query: 366 XXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRC 545
                    + G +++I+D  MP M G+ LL  V       D+PV++MS+++  + + + 
Sbjct: 68  ------RKNKNGFDIVISDVHMPDMDGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKG 118

Query: 546 LEDGAEEF 569
           +  GA ++
Sbjct: 119 VTHGAVDY 126
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>YKOG_BACSU (O34903) Hypothetical sensory transduction protein ykoG|
          Length = 228

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/126 (21%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           H+L V+D     +++++ L+   Y VT   +G++ L+                       
Sbjct: 5   HILIVEDEEKIARVLQLELEYEGYSVTIKHNGTEGLDAAA-------------------- 44

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS-ENVPARISRCLE 551
                 E G +L++ D  +PG++G ++LRR++ + S    PV+++++ +++P +++  L+
Sbjct: 45  ------EGGYSLVLLDVMLPGLSGLEVLRRLRKTDS--QTPVILLTARDSIPDKVTG-LD 95

Query: 552 DGAEEF 569
            GA ++
Sbjct: 96  IGANDY 101
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>AFSQ1_STRCO (Q04942) Transcriptional regulatory protein afsQ1|
          Length = 225

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 27/124 (21%), Positives = 57/124 (45%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L ++D    R  +E+ L    ++V T  SG   L++L                      
Sbjct: 4   LLLIEDDDAIRTALELSLTRQGHRVATAASGEDGLKLL---------------------- 41

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +E   +LI+ D  +PG+ G+++ RR++ +  L   P++++++ N    +   LE G
Sbjct: 42  ----REQRPDLIVLDVMLPGIDGFEVCRRIRRTDQL---PIILLTARNDDIDVVVGLESG 94

Query: 558 AEEF 569
           A+++
Sbjct: 95  ADDY 98
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>Y2151_LEPIN (P24086) Hypothetical protein LA_2151 (ORF 2)|
          Length = 135

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 34/126 (26%), Positives = 53/126 (42%)
 Frame = +3

Query: 192 FHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXX 371
           + VL  ++S    K +  +L++  YQV       K  E++ L DE               
Sbjct: 12  YQVLIAENSRFQAKQLAQILESEGYQVIGFAENGK--ELVKLYDEHRL------------ 57

Query: 372 XAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLE 551
                     V+LI  D  +P M GY     +KG   L  I  VI+S EN PA +   ++
Sbjct: 58  ----------VDLITLDLNLPVMDGYATFFEIKGKGVLPRI--VIVSEENTPAVLKNLID 105

Query: 552 DGAEEF 569
           +GA ++
Sbjct: 106 EGAMDY 111
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>Y1769_LEPIC (Q72RH6) Hypothetical protein LIC_11769|
          Length = 135

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 34/126 (26%), Positives = 53/126 (42%)
 Frame = +3

Query: 192 FHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXX 371
           + VL  ++S    K +  +L++  YQV       K  E++ L DE               
Sbjct: 12  YQVLIAENSRFQAKQLAQILESEGYQVIGFAENGK--ELVKLYDEHRL------------ 57

Query: 372 XAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLE 551
                     V+LI  D  +P M GY     +KG   L  I  VI+S EN PA +   ++
Sbjct: 58  ----------VDLITLDLNLPVMDGYATFFEIKGKGVLPRI--VIVSEENTPAVLKNLID 105

Query: 552 DGAEEF 569
           +GA ++
Sbjct: 106 EGAMDY 111
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>CHEY_YEREN (Q93P00) Chemotaxis protein cheY|
          Length = 128

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKNLRFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      +  G + +++D+ MP M G DLL+ ++   +L  +PV+++++E     I
Sbjct: 46  -----------RTGGFDFVVSDWNMPNMDGLDLLKTIRADGALGTLPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>PILG_PSEAE (P46384) Protein pilG|
          Length = 135

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/108 (27%), Positives = 44/108 (40%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           V+ +DDS   R+  E LLK     V T   G  AL  +                      
Sbjct: 10  VMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIA--------------------- 48

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSEN 521
            D H     N+I  D  MP + GY     +K +S+ K  PV+++SS++
Sbjct: 49  -DTHP----NIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKD 91
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>RCP1_SYNY3 (Q55169) Response regulator rcp1|
          Length = 147

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/108 (27%), Positives = 52/108 (48%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L V+DS  D +L++ +LKTS     T+D      E++ LRD                  
Sbjct: 11  ILLVEDSKADSRLVQEVLKTS-----TIDH-----ELIILRD-------GLAAMAFLQQQ 53

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSEN 521
            ++      NLI+ D  +P   G ++L  +K +  LK IPVV++++ +
Sbjct: 54  GEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101
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>CHEY_YERPE (Q8D0P1) Chemotaxis protein cheY|
          Length = 128

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKNLRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      +  G + +++D+ MP M G DLL+ ++   +L  +PV+++++E     I
Sbjct: 46  -----------RAGGFDFVVSDWNMPNMDGLDLLKTIRTDGALATLPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19|
          Length = 407

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 32/125 (25%), Positives = 55/125 (44%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           +VL VD +      ++ ++K  +YQV+      KAL  L     +               
Sbjct: 35  NVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE--------------- 79

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
                    +N++I D+ MPG+ G   L+ +K  +S  D+PVVIMS +N    + +    
Sbjct: 80  ---------INIVIWDFHMPGIDG---LQALKSITSKLDLPVVIMSDDNQTESVMKATFY 127

Query: 555 GAEEF 569
           GA ++
Sbjct: 128 GACDY 132
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>PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/55 (32%), Positives = 34/55 (61%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LI+ D+ +PG +G   ++ +K  S  +DIPVV++++        R LE GA+++
Sbjct: 48  DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY 102
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>PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/55 (32%), Positives = 34/55 (61%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LI+ D+ +PG +G   ++ +K  S  +DIPVV++++        R LE GA+++
Sbjct: 48  DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY 102
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>PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/55 (32%), Positives = 34/55 (61%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LI+ D+ +PG +G   ++ +K  S  +DIPVV++++        R LE GA+++
Sbjct: 48  DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY 102
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>PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/55 (32%), Positives = 34/55 (61%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LI+ D+ +PG +G   ++ +K  S  +DIPVV++++        R LE GA+++
Sbjct: 48  DLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY 102
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>CHEY_SHIFL (P0AE69) Chemotaxis protein cheY|
          Length = 128

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   +I+D+ MP M G +LL+ ++   ++  +PV+++++E     I
Sbjct: 46  -----------QAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>CHEY_ENTCL (Q9FAD7) Chemotaxis protein cheY|
          Length = 128

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   +I+D+ MP M G +LL+ ++  + +  +PV+++++E     I
Sbjct: 46  -----------QAGGFGFVISDWNMPNMDGLELLKTIRADAGMASMPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>CHEY_ECOLI (P0AE67) Chemotaxis protein cheY|
          Length = 128

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   +I+D+ MP M G +LL+ ++   ++  +PV+++++E     I
Sbjct: 46  -----------QAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>CHEY_ECOL6 (Q8FGP6) Chemotaxis protein cheY|
          Length = 128

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGLDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   +I+D+ MP M G +LL+ ++   ++  +PV+++++E     I
Sbjct: 46  -----------QAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>CHEY_ECO57 (P0AE68) Chemotaxis protein cheY|
          Length = 128

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 AESRFHVLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALEVLGLRDEDXXXXXXXXX 356
           A+     L VDD    R+++  LLK   +  V   + G  AL  L               
Sbjct: 1   ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKL--------------- 45

Query: 357 XXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARI 536
                      Q  G   +I+D+ MP M G +LL+ ++   ++  +PV+++++E     I
Sbjct: 46  -----------QAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENI 94

Query: 537 SRCLEDGAEEF 569
               + GA  +
Sbjct: 95  IAAAQAGASGY 105
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>NTRC_RHIME (P10577) Nitrogen assimilation regulatory protein|
          Length = 484

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +L++TD  MP    +DLL R+K   +  D+PV++MS++N      +  E GA ++
Sbjct: 49  DLVVTDVVMPDENAFDLLPRIK--KARPDLPVLVMSAQNTFMTAIKASEKGAYDY 101
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>RPFG_XANC8 (Q4UU85) Response regulator rpfG|
          Length = 378

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +3

Query: 402 VNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           V+L++ DY MPGM G +  RR++   S +DIP+++++           LE G  +F
Sbjct: 74  VDLLLLDYRMPGMDGLEFARRLRRLPSHRDIPIILITIVGDEPIRQAALEAGVIDF 129
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>NTRC_BRASR (P10576) Nitrogen assimilation regulatory protein|
          Length = 480

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 21/55 (38%), Positives = 32/55 (58%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +L+ITD  MP    +DLL R+K      ++PV++MS++N      R  E GA E+
Sbjct: 49  DLVITDVVMPDENAFDLLPRIK--KMRPNLPVIVMSAQNTFMTAIRPSERGAYEY 101
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>PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 229

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 17/55 (30%), Positives = 34/55 (61%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LI+ D+ +PG +G   ++ +K  +  +DIPVV++++        R LE GA+++
Sbjct: 48  DLILLDWMLPGGSGLQFIKLLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDY 102
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>CHEV_BACSU (P37599) Chemotaxis protein cheV|
          Length = 303

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQ-VTTVDSGSKALE-VLGLRDEDXXXXXXXXXXXXXX 371
           ++ V+DS +  +L++  LK + Y  + + ++G +A E ++ L + +              
Sbjct: 177 LIIVEDSPLLMRLLQDELKEAGYNNIASFENGKEAYEYIMNLAENETDLSKQ-------- 228

Query: 372 XAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS 515
                     +++IITD  MP M G+ L + +K +    D+PV+I SS
Sbjct: 229 ----------IDMIITDIEMPKMDGHRLTKLLKENPKSSDVPVMIFSS 266
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>PHOB_HAEIN (P45189) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 231

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 14/54 (25%), Positives = 32/54 (59%)
 Frame = +3

Query: 408 LIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           LI+ D+ +PG +G   ++ +K   S   IP++++++++       CL  GA+++
Sbjct: 48  LILLDWMLPGRSGIQFIQYIKKQESYAAIPIIMLTAKSTEEDCIACLNAGADDY 101
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>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1|
           (Pseudo-response regulator 1) (OsPRR1)
          Length = 518

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 26/128 (20%), Positives = 54/128 (42%)
 Frame = +3

Query: 186 SRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXX 365
           S+  +L  D      + +  LL   SYQVT   S  + + VL     +            
Sbjct: 26  SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGE------------ 73

Query: 366 XXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRC 545
                       +++I+ +  +P    + +L+ +  +  L+ IP+++MS+ +  + + +C
Sbjct: 74  ------------IDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKC 121

Query: 546 LEDGAEEF 569
           L  GA E+
Sbjct: 122 LRLGAAEY 129
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>PHOB_RHIME (Q52990) Phosphate regulon transcriptional regulatory protein phoB|
          Length = 227

 Score = 37.7 bits (86), Expect = 0.023
 Identities = 16/60 (26%), Positives = 37/60 (61%)
 Frame = +3

Query: 390 QEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           QE   +L+I D+ +PG++G +L RR++     + +P++++++    +   R L  GA+++
Sbjct: 43  QERLPDLLILDWMLPGVSGIELCRRLRQRPETERLPIIMLTARGEESERVRGLATGADDY 102
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>YCF27_PORAE (P28835) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 240

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L +DD    R+++E  L    Y V +   G +AL +                       
Sbjct: 6   ILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIF---------------------- 43

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS-ENVPARISRCLED 554
               +    NL++ D  MP + GY + + ++  S   D+P++++++  +V  RI+  LE 
Sbjct: 44  ----KREHPNLVVLDLMMPKLDGYGVCQELRKES---DVPIIMLTALSDVSDRITG-LEL 95

Query: 555 GAEEF 569
           GA+++
Sbjct: 96  GADDY 100
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>NTRC_AZOBR (P45671) Nitrogen assimilation regulatory protein|
          Length = 481

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LIITD  MP   G DL+ R+K      D+ +++MS++N      +  E GA E+
Sbjct: 49  DLIITDVVMPDENGLDLIPRIK--KIRPDLRIIVMSAQNTLITAVKAAERGAFEY 101
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>ARR20_ARATH (Q9LZJ8) Putative two-component response regulator ARR20|
          Length = 426

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 30/111 (27%), Positives = 49/111 (44%)
 Frame = +3

Query: 237 IEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXAPDHHQEVGVNLII 416
           ++ L+   SYQVT  +SG +A+  L                       + H+   ++L+I
Sbjct: 54  LKNLMTQYSYQVTKYESGEEAMAFL---------------------MKNKHE---IDLVI 89

Query: 417 TDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
            D+ MP + G D L  +       D+PVVIMS E     +   ++ GA +F
Sbjct: 90  WDFHMPDINGLDALNII---GKQMDLPVVIMSHEYKKETVMESIKYGACDF 137
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>CTRA_CAUCR (Q45994) Cell cycle transcriptional regulator ctrA (Response|
           regulator sokA)
          Length = 231

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 27/124 (21%), Positives = 55/124 (44%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL ++D     + IE++LK+  + V T D G + +++  + D D                
Sbjct: 3   VLLIEDDSATAQTIELMLKSEGFNVYTTDLGEEGVDLGKIYDYD---------------- 46

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                     LI+ D  +P M+G D+LR ++ +    + P++I+S  +      +    G
Sbjct: 47  ----------LILLDLNLPDMSGIDVLRTLRVAKI--NTPIMILSGSSEIDTKVKTFAGG 94

Query: 558 AEEF 569
           A+++
Sbjct: 95  ADDY 98
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>LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 849

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 29/108 (26%), Positives = 43/108 (39%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL VDD  + R L++M L          ++G  A+EV                       
Sbjct: 723 VLIVDDKEVQRALVQMYLNQLGVNSLQANNGENAVEVFKANH------------------ 764

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSEN 521
                   V+LI+ D  MP M G+D  +R+K  S     P+V +S E+
Sbjct: 765 --------VDLILMDVQMPVMNGFDASQRIKELS--PQTPIVALSGES 802
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>YCF27_PORPU (P51358) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 243

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 26/124 (20%), Positives = 54/124 (43%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD    R+++E  L    Y+V T  +G +AL +                       
Sbjct: 8   ILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIF---------------------- 45

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               ++   +L++ D  MP + GY + + ++  S   D+P++++++          LE G
Sbjct: 46  ----RKEYPSLVVLDVMMPKLDGYGVCQELRKES---DVPIIMLTALGEVCDRITGLEIG 98

Query: 558 AEEF 569
           A+++
Sbjct: 99  ADDY 102
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>YCF27_GALSU (P28257) Probable transcriptional regulator ycf27 (OmpR-like|
           protein)
          Length = 255

 Score = 36.6 bits (83), Expect = 0.051
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L  DD    R+++E  L    Y+V T   G  AL +                       
Sbjct: 10  ILIADDESSIRRILETRLSIIGYEVLTAPDGRSALFLF---------------------- 47

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS-ENVPARISRCLED 554
              H+E   NL++ D  MP + GY + + ++  S   DIP++++++  +V  RI+  LE 
Sbjct: 48  ---HKE-HPNLVVLDVMMPKIDGYGVCQEIRKES---DIPIIMLTALGDVTDRITG-LEL 99

Query: 555 GAEEF 569
           GA+++
Sbjct: 100 GADDY 104
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>CYAB_STIAU (P40138) Adenylate cyclase 2 (EC 4.6.1.1) (ATP pyrophosphate-lyase|
           2) (Adenylyl cyclase 2) (AC2)
          Length = 352

 Score = 35.8 bits (81), Expect = 0.088
 Identities = 17/54 (31%), Positives = 35/54 (64%)
 Frame = +3

Query: 408 LIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           ++++D  MPG+ G +L  R+K S S + +PV+I+++ +  A   + L  GA+++
Sbjct: 54  IVLSDLDMPGIDGLELCWRLKESPS-RQVPVIILTANDSEAERVKGLRAGADDY 106
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>NTRC_KLEPN (P03029) Nitrogen assimilation regulatory protein|
          Length = 469

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 26/105 (24%), Positives = 47/105 (44%)
 Frame = +3

Query: 207 VDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXAPDH 386
           VDD    R ++E  L  +    TT +SG++ L+ L  +  D                   
Sbjct: 9   VDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTKTPD------------------- 49

Query: 387 HQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSEN 521
                  ++++D  MPGM G  LL+++K    +  +PV+IM++ +
Sbjct: 50  -------VLLSDIRMPGMDGLALLKQIKQRHPM--LPVIIMTAHS 85
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>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 27/107 (25%), Positives = 43/107 (40%)
 Frame = +3

Query: 162  AMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXX 341
            A T    +    VL VDD   +  L+   L     +V   DSG  AL +           
Sbjct: 963  AATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALW---------- 1012

Query: 342  XXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSS 482
                            +E   +++ITD  MPG++GY+L RR++ + +
Sbjct: 1013 ----------------REHAFDVVITDCNMPGISGYELARRIRAAEA 1043
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>REGX3_MYCSM (Q9F868) Sensory transduction protein regX3|
          Length = 228

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 26/124 (20%), Positives = 53/124 (42%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL V+D       +  LL+   ++ T V  G  AL                         
Sbjct: 4   VLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALA------------------------ 39

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +  G ++++ D  +PGM+G D+ ++++  SS   +PV+++++ +        LE G
Sbjct: 40  --EFERSGADIVLLDLMLPGMSGTDVCKQLRARSS---VPVIMVTARDSEIDKVVGLELG 94

Query: 558 AEEF 569
           A+++
Sbjct: 95  ADDY 98
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>CHEB_BACSU (Q05522) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 357

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVT---TVDSGSKALEVLGLRDEDXXXXXXXXXXXXX 368
           VL VDDS   RK+I   L T   Q+    T  +G +AL+ + L   D             
Sbjct: 4   VLVVDDSAFMRKMISDFL-TEEKQIEVIGTARNGEEALKKIELLKPD------------- 49

Query: 369 XXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPAR--ISR 542
                        +I  D  MP M G D +R++     + ++PV+++SS+    +     
Sbjct: 50  -------------VITLDVEMPVMNGTDTVRKI---IEIYNLPVIMVSSQTEKGKECTIN 93

Query: 543 CLEDGAEEF 569
           CLE GA +F
Sbjct: 94  CLEIGAFDF 102
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>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 25/95 (26%), Positives = 38/95 (40%)
 Frame = +3

Query: 198  VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
            VL VDD   +  L+   L     +V   DSG  AL +                       
Sbjct: 975  VLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALW---------------------- 1012

Query: 378  PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSS 482
                 E   +++ITD  MPG+ GY+L RR++ + +
Sbjct: 1013 ----HEHAFDVVITDCNMPGINGYELARRIRAAEA 1043
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>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 25/95 (26%), Positives = 38/95 (40%)
 Frame = +3

Query: 198  VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
            VL VDD   +  L+   L     +V   DSG  AL +                       
Sbjct: 975  VLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALW---------------------- 1012

Query: 378  PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSS 482
                 E   +++ITD  MPG+ GY+L RR++ + +
Sbjct: 1013 ----HEHAFDVVITDCNMPGINGYELARRIRAAEA 1043
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>HNR_SHIFL (P0AEV3) Protein hnr|
          Length = 337

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 30/123 (24%), Positives = 47/123 (38%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L V+D  + R L++    +          G  ALE+LG                     
Sbjct: 10  ILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLG------------------GFT 51

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
           PD        L+I D  MP M G  LL  ++        PV+++S+    A I++ L  G
Sbjct: 52  PD--------LMICDIAMPRMNGLKLLEHIRNRGD--QTPVLVISATENMADIAKALRLG 101

Query: 558 AEE 566
            E+
Sbjct: 102 VED 104
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>HNR_ECOLI (P0AEV1) Protein hnr|
          Length = 337

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 30/123 (24%), Positives = 47/123 (38%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L V+D  + R L++    +          G  ALE+LG                     
Sbjct: 10  ILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLG------------------GFT 51

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
           PD        L+I D  MP M G  LL  ++        PV+++S+    A I++ L  G
Sbjct: 52  PD--------LMICDIAMPRMNGLKLLEHIRNRGD--QTPVLVISATENMADIAKALRLG 101

Query: 558 AEE 566
            E+
Sbjct: 102 VED 104
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>HNR_ECO57 (P0AEV2) Protein hnr|
          Length = 337

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 30/123 (24%), Positives = 47/123 (38%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L V+D  + R L++    +          G  ALE+LG                     
Sbjct: 10  ILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLG------------------GFT 51

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
           PD        L+I D  MP M G  LL  ++        PV+++S+    A I++ L  G
Sbjct: 52  PD--------LMICDIAMPRMNGLKLLEHIRNRGD--QTPVLVISATENMADIAKALRLG 101

Query: 558 AEE 566
            E+
Sbjct: 102 VED 104
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>YCF29_PORPU (P51343) Probable transcriptional regulator ycf29|
          Length = 209

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENV 524
           +LII+D  MP + GY+LL +++    L  IPV+ ++++ +
Sbjct: 48  DLIISDIIMPIIDGYELLEKLRKIDKLAKIPVIFLTAKGM 87
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>REGX3_MYCTU (Q11156) Sensory transduction protein regX3|
          Length = 227

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 26/124 (20%), Positives = 52/124 (41%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL V+D       +  LL+   ++ T V  G  AL                         
Sbjct: 4   VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALA------------------------ 39

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                  G ++++ D  +PGM+G D+ ++++  SS   +PV+++++ +        LE G
Sbjct: 40  --EFDRAGADIVLLDLMLPGMSGTDVCKQLRARSS---VPVIMVTARDSEIDKVVGLELG 94

Query: 558 AEEF 569
           A+++
Sbjct: 95  ADDY 98
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>REGX3_MYCBO (O07130) Sensory transduction protein regX3|
          Length = 227

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 26/124 (20%), Positives = 52/124 (41%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL V+D       +  LL+   ++ T V  G  AL                         
Sbjct: 4   VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALA------------------------ 39

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                  G ++++ D  +PGM+G D+ ++++  SS   +PV+++++ +        LE G
Sbjct: 40  --EFDRAGADIVLLDLMLPGMSGTDVCKQLRARSS---VPVIMVTARDSEIDKVVGLELG 94

Query: 558 AEEF 569
           A+++
Sbjct: 95  ADDY 98
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>ZRAR_KLEOX (Q9APD9) Transcriptional regulatory protein zraR|
          Length = 443

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 28/124 (22%), Positives = 54/124 (43%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD +    +++ LL+   Y+V   ++G +ALE +                      
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKV---------------------- 45

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +E   +L++ D  M  M G + L+ +K  +    IPV+IM++ +        L+ G
Sbjct: 46  ----REKVFDLVLCDIRMAEMDGIETLKEIKTFN--PSIPVLIMTAYSSVDTAVEALKSG 99

Query: 558 AEEF 569
           A ++
Sbjct: 100 ALDY 103
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>ZRAR_ECOLI (P14375) Transcriptional regulatory protein zraR|
          Length = 441

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 29/124 (23%), Positives = 52/124 (41%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD +    +++ LL+   Y V   +SG +ALE +                      
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQV---------------------- 45

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +E   +L++ D  M  M G   L+ +K  +    IPV+IM++ +        L+ G
Sbjct: 46  ----REQVFDLVLCDVRMAEMDGIATLKEIKALNPA--IPVLIMTAYSSVETAVEALKTG 99

Query: 558 AEEF 569
           A ++
Sbjct: 100 ALDY 103
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>YYCF_BACSU (P37478) Transcriptional regulatory protein yycF|
          Length = 235

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 25/124 (20%), Positives = 55/124 (44%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD      ++E  L+   Y+V     G++A+E++                      
Sbjct: 5   ILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMV---------------------- 42

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +E+  +LI+ D  +P   G ++ R V+      D+P++++++++        LE G
Sbjct: 43  ----EELQPDLILLDIMLPNKDGVEVCREVR---KKYDMPIIMLTAKDSEIDKVIGLEIG 95

Query: 558 AEEF 569
           A+++
Sbjct: 96  ADDY 99
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>MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase mak1 (EC|
            2.7.13.3) (Mcs4-associated kinase 1) (His-Asp
            phosphorelay kinase phk3)
          Length = 1639

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
 Frame = +3

Query: 180  AESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXX 359
            A+S F VL  +D++I+ K+I   L+    +      G + +E                  
Sbjct: 1502 AKSGFSVLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVE------------------ 1543

Query: 360  XXXXXAPDHHQEVGVNLIITDYCMPGMTGYDL---LRRVKGSSSLKDIPVVIMSSENVPA 530
                  P+ +     +LI+ D  MP M GY     +R+ +  +    +P+V +S+  +P 
Sbjct: 1544 EWKREKPNFY-----SLILMDLQMPVMDGYQACNEIRKYELENDYPKVPIVALSANALPH 1598

Query: 531  RISRCLEDGAEEF 569
             +  C + G + +
Sbjct: 1599 VVLSCKDSGFDSY 1611
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>YCF29_CYAPA (P48359) Probable transcriptional regulator ycf29|
          Length = 210

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 12/41 (29%), Positives = 28/41 (68%)
 Frame = +3

Query: 402 VNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENV 524
           ++LII D  MPGM G++ L +++ ++    +PV+++++  +
Sbjct: 46  IDLIICDIIMPGMGGFNFLHQLRLNTDYCTLPVILLTTRGL 86
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>FIMZ_SALTY (P26319) Fimbriae Z protein|
          Length = 210

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLL-KTSSYQVTT-VDSGSKALEVLGLRDEDXXXXXXXXXXXXXX 371
           V+ +D+  I R  IE+LL K S+ QV    D    A+E L                    
Sbjct: 6   VIIMDEHPIVRMSIEVLLGKNSNIQVVLKTDDSRTAIEYL-------------------- 45

Query: 372 XAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLE 551
                 +   V+L+I D  +PG  G+ LL+R+K  S  +   ++ +SS++      R + 
Sbjct: 46  ------RTYPVDLVILDIELPGTDGFTLLKRIK--SIQEHTRILFLSSKSEAFYAGRAIR 97

Query: 552 DGAEEF 569
            GA  F
Sbjct: 98  AGANGF 103
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>FIMZ_ECOLI (P0AEL8) Fimbriae Z protein|
          Length = 210

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +3

Query: 402 VNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           V+LII D  +PG  G+  L+R+K   S   + V+ +SS++      R ++ GA  F
Sbjct: 50  VDLIIMDIDLPGTDGFTFLKRIKQIQS--TVKVLFLSSKSECFYAGRAIQAGANGF 103
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>FIMZ_ECO57 (P0AEL9) Fimbriae Z protein|
          Length = 210

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +3

Query: 402 VNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           V+LII D  +PG  G+  L+R+K   S   + V+ +SS++      R ++ GA  F
Sbjct: 50  VDLIIMDIDLPGTDGFTFLKRIKQIQS--TVKVLFLSSKSECFYAGRAIQAGANGF 103
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>ZRAR_ECO57 (Q8X613) Transcriptional regulatory protein zraR|
          Length = 441

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 29/124 (23%), Positives = 52/124 (41%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD +    +++ LL+   Y V   +SG +ALE +                      
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQV---------------------- 45

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +E   +L++ D  M  M G   L+ +K  +    IPV+IM++ +        L+ G
Sbjct: 46  ----RERVFDLVLCDVRMAEMDGIATLKEIKALNPA--IPVLIMTAYSSVETAVEALKTG 99

Query: 558 AEEF 569
           A ++
Sbjct: 100 ALDY 103
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>EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3)|
          Length = 1197

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 24/108 (22%), Positives = 42/108 (38%)
 Frame = +3

Query: 159  RAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXX 338
            +A   +    +  +L  DD   +R L++  L    Y V     G +AL  + ++  D   
Sbjct: 948  KAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYD--- 1004

Query: 339  XXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSS 482
                                   L+ITD  MP M G++L R+++  +S
Sbjct: 1005 -----------------------LLITDVNMPNMDGFELTRKLREQNS 1029
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>CHEB_BACHD (Q9KA55) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 346

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 32/111 (28%), Positives = 46/111 (41%)
 Frame = +3

Query: 183 ESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXX 362
           ESR  VL VDDS   RK+I  +L++              LEV+G                
Sbjct: 2   ESRIKVLVVDDSAFMRKVITSMLES-----------DPRLEVVG-----TARNGEDALKK 45

Query: 363 XXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS 515
               APD        ++  D  MP M G + L+R+   + L   P++I+SS
Sbjct: 46  RKTLAPD--------VMTLDVEMPVMDGIETLKRLMSENPL---PIIIVSS 85
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>VIRG_AGRTU (Q44444) Regulatory protein virG|
          Length = 267

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           HVL VDD V  R LI   L   +++VT V   ++   VL                     
Sbjct: 29  HVLLVDDDVAMRHLIIEYLTIHAFKVTAVADSTQFTRVL--------------------- 67

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARIS-RCLE 551
                    V++++ D  +    G +++R +   S   DIP++I+S + +        LE
Sbjct: 68  -----SSATVDVVVVDLNLVREDGLEIVRNLAAKS---DIPIIIISGDRLEETDKVVALE 119

Query: 552 DGAEEF 569
            GA +F
Sbjct: 120 LGASDF 125
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>VIRG_AGRT9 (P62722) Regulatory protein virG|
          Length = 267

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           HVL VDD V  R LI   L   +++VT V   ++   VL                     
Sbjct: 29  HVLLVDDDVAMRHLIIEYLTIHAFKVTAVADSTQFTRVL--------------------- 67

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARIS-RCLE 551
                    V++++ D  +    G +++R +   S   DIP++I+S + +        LE
Sbjct: 68  -----SSATVDVVVVDLNLGREDGLEIVRNLAAKS---DIPIIIISGDRLEETDKVVALE 119

Query: 552 DGAEEF 569
            GA +F
Sbjct: 120 LGASDF 125
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>COPR_PSESM (Q02540) Transcriptional activator protein copR|
          Length = 227

 Score = 32.7 bits (73), Expect = 0.74
 Identities = 17/65 (26%), Positives = 38/65 (58%)
 Frame = +3

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
           A D       +L+I D  MPG+ G++++RR++ +   + +PV+ +++ +      + LE 
Sbjct: 36  AVDQALNEAYDLLILDVMMPGLDGWEVIRRLRTAG--QPVPVLFLTARDGVDDRVKGLEL 93

Query: 555 GAEEF 569
           GA+++
Sbjct: 94  GADDY 98
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>YFHA_ECOLI (P0AFU4) Hypothetical protein yfhA (ORF-2)|
          Length = 444

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDED 329
           H+L VDD     KL+ + L +  Y V T +SG++ L VL     D
Sbjct: 7   HLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVD 51
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>YFHA_ECO57 (P0AFU5) Hypothetical protein yfhA|
          Length = 444

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDED 329
           H+L VDD     KL+ + L +  Y V T +SG++ L VL     D
Sbjct: 7   HLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVD 51
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>ARCA_SHIFL (P0A9Q4) Aerobic respiration control protein arcA|
          Length = 238

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 19/97 (19%), Positives = 39/97 (40%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           H+L V+D ++ R  ++ + +   Y V     G++  ++L                     
Sbjct: 5   HILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQIL--------------------- 43

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSL 485
                 E  +NL+I D  +PG  G  L R ++  +++
Sbjct: 44  -----SEYDINLVIMDINLPGKNGLLLARELREQANV 75
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>ARCA_ECOLI (P0A9Q1) Aerobic respiration control protein arcA (Dye resistance|
           protein)
          Length = 238

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 19/97 (19%), Positives = 39/97 (40%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           H+L V+D ++ R  ++ + +   Y V     G++  ++L                     
Sbjct: 5   HILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQIL--------------------- 43

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSL 485
                 E  +NL+I D  +PG  G  L R ++  +++
Sbjct: 44  -----SEYDINLVIMDINLPGKNGLLLARELREQANV 75
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>ARCA_ECOL6 (P0A9Q2) Aerobic respiration control protein arcA|
          Length = 238

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 19/97 (19%), Positives = 39/97 (40%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           H+L V+D ++ R  ++ + +   Y V     G++  ++L                     
Sbjct: 5   HILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQIL--------------------- 43

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSL 485
                 E  +NL+I D  +PG  G  L R ++  +++
Sbjct: 44  -----SEYDINLVIMDINLPGKNGLLLARELREQANV 75
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>ARCA_ECO57 (P0A9Q3) Aerobic respiration control protein arcA|
          Length = 238

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 19/97 (19%), Positives = 39/97 (40%)
 Frame = +3

Query: 195 HVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           H+L V+D ++ R  ++ + +   Y V     G++  ++L                     
Sbjct: 5   HILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQIL--------------------- 43

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSL 485
                 E  +NL+I D  +PG  G  L R ++  +++
Sbjct: 44  -----SEYDINLVIMDINLPGKNGLLLARELREQANV 75
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>VANR_ENTFA (Q47744) Regulatory protein vanRB|
          Length = 220

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = +3

Query: 408 LIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           L+I D  +PGM G++LLR  +  +   D P+++M++ +      R  +  A+++
Sbjct: 49  LVILDIMLPGMNGHELLREFRAQN---DTPILMMTALSDDENQIRAFDAEADDY 99
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>YPH5_THIVI (P45365) Hypothetical 76.5 kDa protein in phbC 3'region (ORF5)|
          Length = 692

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 27/127 (21%), Positives = 45/127 (35%)
 Frame = +3

Query: 189 RFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXX 368
           R+ +L ++      K I  LL T   +   VD   K L  +                   
Sbjct: 137 RYRILILEQDASHAKKIASLLATIGMETLVVDDPMKILARM------------------- 177

Query: 369 XXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCL 548
                  Q    NL++ D  +PG TG +L   ++       IP++ +S E    +    L
Sbjct: 178 -------QAFRPNLVLMDLYLPGATGSELTTIIRDHDDFYGIPILFLSQEADLDKQLAAL 230

Query: 549 EDGAEEF 569
           + G + F
Sbjct: 231 KAGGDGF 237
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>REGX3_MYCLE (P54884) Sensory transduction protein regX3|
          Length = 198

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 15/57 (26%), Positives = 36/57 (63%)
 Frame = +3

Query: 399 GVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           G ++++ D  +PGM+G D+ ++++  SS   +PV+++++ +        LE GA+++
Sbjct: 16  GADIVLLDLMLPGMSGTDVYKQLRVRSS---VPVIMVTARDSEIDKVVGLELGADDY 69
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>PILH_PSEAE (P43501) Protein pilH|
          Length = 121

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/108 (18%), Positives = 44/108 (40%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDDS  +   +  +L+   +QV   ++G   + +      D                
Sbjct: 4   ILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPD---------------- 47

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSEN 521
                     +++ D  MPG+ G+   R++   +    IPV+I+++++
Sbjct: 48  ----------VVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKD 85
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>ARCA_HAEIN (P44918) Aerobic respiration control protein arcA homolog|
          Length = 236

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/124 (19%), Positives = 52/124 (41%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L V+D ++ R  ++ + +   Y V   ++G +   +L                      
Sbjct: 6   ILVVEDEIVTRNTLKGIFEAEGYDVFEAENGVEMHHILA--------------------- 44

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
            +H+    +NL++ D  +PG  G  L R ++   SL   P++ ++  +        LE G
Sbjct: 45  -NHN----INLVVMDINLPGKNGLLLARELREELSL---PLIFLTGRDNEVDKILGLEIG 96

Query: 558 AEEF 569
           A+++
Sbjct: 97  ADDY 100
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>BARA_SHIFL (P59342) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 27/124 (21%), Positives = 49/124 (39%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           V+AVDD+  + KLI  LL+     V   DSG +A+E                        
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE------------------------ 705

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +++  +LI+ D  MP M G      +      +  PV+ +++  +  +  + L  G
Sbjct: 706 --RAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQRQTPVIAVTAHAMAGQKEKLLGAG 763

Query: 558 AEEF 569
             ++
Sbjct: 764 MSDY 767
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>EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3)|
          Length = 1197

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 23/108 (21%), Positives = 42/108 (38%)
 Frame = +3

Query: 159  RAMTVVDAESRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXX 338
            +A   +    +  +L  DD   +R L++  L    Y V     G +AL  + ++  D   
Sbjct: 948  KAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYD--- 1004

Query: 339  XXXXXXXXXXXXAPDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSS 482
                                   L+ITD  MP + G++L R+++  +S
Sbjct: 1005 -----------------------LLITDVNMPNVDGFELTRKLREQNS 1029
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>ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18|
          Length = 635

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 31/124 (25%), Positives = 50/124 (40%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VLAVDD+    + +E LL    Y VT      KALE+L                      
Sbjct: 20  VLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEML---------------------- 57

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                    +L+I+D  MP   G+ LL          D+PV+++S+ +    + + +  G
Sbjct: 58  --RENSNMFDLVISDVEMPDTDGFKLLE----IGLEMDLPVIMLSAHSDYDSVMKGIIHG 111

Query: 558 AEEF 569
           A ++
Sbjct: 112 ACDY 115
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>SP0F_BACSU (P06628) Sporulation initiation phosphotransferase F (EC 2.7.-.-)|
           (Stage 0 sporulation protein F)
          Length = 124

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 29/121 (23%), Positives = 49/121 (40%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           +L VDD    R L+  +     YQ     +G +AL+++     D                
Sbjct: 6   ILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPD---------------- 49

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
                     L++ D  +PGM G ++L+R+K     ++I V+IM++      I    E G
Sbjct: 50  ----------LVLLDMKIPGMDGIEILKRMKVID--ENIRVIIMTAYGELDMIQESKELG 97

Query: 558 A 560
           A
Sbjct: 98  A 98
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>BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 27/124 (21%), Positives = 49/124 (39%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           V+AVDD+  + KLI  LL+     V   DSG +A+E                        
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE------------------------ 705

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +++  +LI+ D  MP M G      +      +  PV+ +++  +  +  + L  G
Sbjct: 706 --RAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAG 763

Query: 558 AEEF 569
             ++
Sbjct: 764 MSDY 767
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>BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 27/124 (21%), Positives = 49/124 (39%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           V+AVDD+  + KLI  LL+     V   DSG +A+E                        
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE------------------------ 705

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +++  +LI+ D  MP M G      +      +  PV+ +++  +  +  + L  G
Sbjct: 706 --RAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAG 763

Query: 558 AEEF 569
             ++
Sbjct: 764 MSDY 767
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>BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 27/124 (21%), Positives = 49/124 (39%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           V+AVDD+  + KLI  LL+     V   DSG +A+E                        
Sbjct: 670 VMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVE------------------------ 705

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDG 557
               +++  +LI+ D  MP M G      +      +  PV+ +++  +  +  + L  G
Sbjct: 706 --RAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAG 763

Query: 558 AEEF 569
             ++
Sbjct: 764 MSDY 767
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>LYTT_OCEIH (Q8EQQ3) Sensory transduction protein lytT|
          Length = 246

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +3

Query: 387 HQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSS 515
           +QE   N+I  D  MPG+ G ++ ++++     KDI ++  ++
Sbjct: 44  YQEYNPNVIFLDIHMPGINGIEVAKKIRNEFEDKDIIIIFTTA 86
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>QSEB_SALTY (P66795) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +3

Query: 411 IITDYCMPGMTGYDLLR--RVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +I D  +PGM G D+LR  R KG    K  PV+I+++ +  A     L  GA+++
Sbjct: 48  VILDLTLPGMDGRDILREWREKG----KQEPVLILTARDALAERVEGLRLGADDY 98
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>QSEB_SALTI (P66796) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +3

Query: 411 IITDYCMPGMTGYDLLR--RVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +I D  +PGM G D+LR  R KG    K  PV+I+++ +  A     L  GA+++
Sbjct: 48  VILDLTLPGMDGRDILREWREKG----KQEPVLILTARDALAERVEGLRLGADDY 98
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>CUSR_ECOLI (P0ACZ8) Transcriptional regulatory protein cusR|
          Length = 227

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/55 (27%), Positives = 35/55 (63%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LII D  +P + G+D++R ++  S+ K +P++++++        + LE GA+++
Sbjct: 46  DLIILDIMLPDVNGWDIVRMLR--SANKGMPILLLTALGTIEHRVKGLELGADDY 98
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>CUSR_ECOL6 (P0ACZ9) Transcriptional regulatory protein cusR|
          Length = 227

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/55 (27%), Positives = 35/55 (63%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LII D  +P + G+D++R ++  S+ K +P++++++        + LE GA+++
Sbjct: 46  DLIILDIMLPDVNGWDIVRMLR--SANKGMPILLLTALGTIEHRVKGLELGADDY 98
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>CUSR_ECO57 (P0AD00) Transcriptional regulatory protein cusR|
          Length = 227

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/55 (27%), Positives = 35/55 (63%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LII D  +P + G+D++R ++  S+ K +P++++++        + LE GA+++
Sbjct: 46  DLIILDIMLPDVNGWDIVRMLR--SANKGMPILLLTALGTIEHRVKGLELGADDY 98
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>YEDW_ECOLI (P76340) Probable transcriptional regulatory protein yedW|
          Length = 223

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +3

Query: 408 LIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           LII D  +PGM G+ +L+ ++   + K  PV+ +++ +      R L+ GA ++
Sbjct: 47  LIILDIMLPGMDGWQILQTLR---TAKQTPVICLTARDSVDDRVRGLDSGANDY 97
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>ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)|
          Length = 738

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXXA 377
           VL +D++ + R + + LL     +VTTV S  + L V+                      
Sbjct: 612 VLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVS--------------------- 650

Query: 378 PDHHQEVGVNLIITDYCMPGMTGYDLLRRV--KGSSSLKDIPVVIMSSENV-PARISRCL 548
             H  +V    +  D CMPG+  Y +  R+  K +      P+++  S N   +   +C+
Sbjct: 651 --HEHKV----VFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCM 704

Query: 549 EDGAE 563
             G +
Sbjct: 705 SFGLD 709
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>DCTD_RHILE (P10046) C4-dicarboxylate transport transcriptional regulatory|
           protein dctD
          Length = 448

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 411 IITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           ++TD  MP + G  L   ++G     D+PV++M+         + ++DGA +F
Sbjct: 52  VVTDIRMPEIDGLQLFATLQGMDV--DLPVILMTGHGDIPMAVQAIQDGAYDF 102
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>BCER_BACSU (O34951) Sensory transduction protein bceR|
          Length = 231

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 396 VGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           V  + +I D  +P   G+   R ++  S+   +P++ +SS + PA +   ++ GA++F
Sbjct: 44  VNPDCVIIDVQLPKFDGFHWCRLIRSRSN---VPILFLSSRDHPADMVMSMQLGADDF 98
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>BCER_BACHD (Q9K621) Sensory transduction protein bceR|
          Length = 231

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 14/55 (25%), Positives = 31/55 (56%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +L+I D  +P   G+   R ++  S+   +P++ +SS + P  +   ++ GA++F
Sbjct: 47  DLVIIDIQLPKFDGFHWCRMIRQHSN---VPIIFLSSRDHPTDMVMSMQLGADDF 98
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>QSEB_ECOLI (P52076) Transcriptional regulatory protein qseB|
          Length = 219

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 411 IITDYCMPGMTGYDLLR--RVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +I D  +PGM G D+LR  R KG       PV+I+++ +  A     L  GA+++
Sbjct: 48  VILDLTLPGMDGRDILREWREKGQRE----PVLILTARDALAERVEGLRLGADDY 98
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>YPH2_SYNP2 (P32040) Hypothetical protein in petH 3'region (Fragment)|
          Length = 63

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +3

Query: 174 VDAE--SRFHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVL 311
           +DAE  ++  +L V+D  + R +I M L+   Y+V   D+G   L +L
Sbjct: 11  LDAELSTKARILVVEDEAVIRDMIVMGLEEEGYEVFFADNGRTGLHML 58
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>CHEY_THEMA (Q56312) Chemotaxis protein cheY|
          Length = 120

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 23/125 (18%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
 Frame = +3

Query: 198 VLAVDDSVIDRKLIEMLLKTSSYQVT-TVDSGSKALEVLGLRDEDXXXXXXXXXXXXXXX 374
           VL VDD+   R +++ ++  + Y+V     +G +A+E                       
Sbjct: 5   VLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE----------------------- 41

Query: 375 APDHHQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLED 554
               ++E+  +++  D  MP M G D ++ +       +  +++ S+    A +   ++ 
Sbjct: 42  ---KYKELKPDIVTMDITMPEMNGIDAIKEIMKID--PNAKIIVCSAMGQQAMVIEAIKA 96

Query: 555 GAEEF 569
           GA++F
Sbjct: 97  GAKDF 101
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>YCLJ_BACSU (P94413) Hypothetical sensory transduction protein yclJ|
          Length = 227

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 13/55 (23%), Positives = 34/55 (61%)
 Frame = +3

Query: 405 NLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +LII D  +P M G  + R+++ +S+   +P++++++++  +      E GA+++
Sbjct: 46  DLIILDIMLPSMDGVTICRKIRETST---VPIIMLTAKDTESDQVIGFEMGADDY 97
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>FIXJ_RHIME (P10958) Transcriptional regulatory protein fixJ|
          Length = 204

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +3

Query: 393 EVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEEF 569
           +V   +++TD  MP M+G +LLR + G   +    +VI    +VP  +   ++ GA +F
Sbjct: 45  DVRNGVLVTDLRMPDMSGVELLRNL-GDLKINIPSIVITGHGDVPMAV-EAMKAGAVDF 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,636,037
Number of Sequences: 219361
Number of extensions: 991024
Number of successful extensions: 3489
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 3399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3456
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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