ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart31c06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042261.1| Zea mays ZmRR4 mRNA for response regulator 4, complete cds Length = 891 Score = 214 bits (108), Expect = 2e-52 Identities = 141/152 (92%) Strand = Plus / Plus Query: 162 gccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtc 221 |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct: 45 gccatgacggtgctggacgccgagtcgcggttccatgtcctggcggtggacgacagcatc 104 Query: 222 atcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtg 281 |||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||| Sbjct: 105 atcgacaggaagctcatcgagatgctgctcaagagctcgtcttaccaagtgaccacggtg 164 Query: 282 gactccgggagcaaggcgctggaggtgctggg 313 || ||||||| ||||||||||||| ||||||| Sbjct: 165 gagtccgggaacaaggcgctggagctgctggg 196 Score = 208 bits (105), Expect = 1e-50 Identities = 165/185 (89%) Strand = Plus / Plus Query: 385 accatcaggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacag 444 ||||||||||| | | ||||| | | ||||||||||||||||||||||| |||||||||| Sbjct: 271 accatcaggagatcgacgtgagtctcatcatcactgactactgcatgcccggcatgacag 330 Query: 445 gatacgatctgctgaggagggtcaaggggtcatcctcactgaaggacattccggtggtga 504 ||||||||||||| | | | || |||||||| || || || ||||||||||||||||||| Sbjct: 331 gatacgatctgctcaagcgagtgaaggggtcctcatcgctcaaggacattccggtggtga 390 Query: 505 tcatgtcctctgagaatgtgcctgccaggatcagcaggtgcttggaggatggcgcggagg 564 ||||||| |||||||| ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 391 tcatgtcgtctgagaacgtgcctgcccggatcagcaggtgcttgcaggatggcgcggagg 450 Query: 565 agttc 569 ||||| Sbjct: 451 agttc 455
>dbj|AB042267.1| Zea mays ZmRR5 mRNA for response regulator 5, complete cds Length = 1654 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 401 cgtgaatttgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgag 460 ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 611 cgtgaatctcatcatcactgactactgcatgccaggcatgacaggatacgatctgctcaa 670 Query: 461 gagggtcaaggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaa 520 ||| || |||||||| ||||| || ||||||||||| |||||||||||||| |||||||| Sbjct: 671 gagagtgaaggggtcctcctcgctcaaggacattcctgtggtgatcatgtcgtctgagaa 730 Query: 521 tgtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagttc 569 |||||||||| ||||||||||||||||| | || ||||||||||||||| Sbjct: 731 tgtgcctgcccggatcagcaggtgcttgcaagacggcgcggaggagttc 779 Score = 192 bits (97), Expect = 9e-46 Identities = 139/153 (90%) Strand = Plus / Plus Query: 161 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 220 ||||||||||||| ||| |||||||| || ||||| ||||| ||||||||||||||| | Sbjct: 404 cgccatgacggtgccggatgccgagtcgcgcttccatgtcctcgcggtggacgacagcct 463 Query: 221 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 280 | ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 464 cgtcgacaggaaactcatcgagatgctgctcaagacctcgtcctaccaagtgaccacggt 523 Query: 281 ggactccgggagcaaggcgctggaggtgctggg 313 ||| ||||||||||||||||||||| ||||||| Sbjct: 524 ggattccgggagcaaggcgctggagctgctggg 556
>gb|AY104728.1| Zea mays PCO113156 mRNA sequence Length = 1312 Score = 192 bits (97), Expect = 9e-46 Identities = 151/169 (89%) Strand = Plus / Plus Query: 401 cgtgaatttgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgag 460 ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 342 cgtgaatctcatcatcactgactactgcatgccaggcatgacaggatacgatctgctcaa 401 Query: 461 gagggtcaaggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaa 520 ||| | |||||||| || || || ||||||||||| |||||||||||||| |||||||| Sbjct: 402 gagaatgaaggggtcctcttcgctcaaggacattcctgtggtgatcatgtcgtctgagaa 461 Query: 521 tgtgcctgccaggatcagcaggtgcttggaggatggcgcggaggagttc 569 |||||||||| ||||||||||||||||| | || ||||||||||||||| Sbjct: 462 tgtgcctgcccggatcagcaggtgcttgcaagacggcgcggaggagttc 510 Score = 184 bits (93), Expect = 2e-43 Identities = 138/153 (90%) Strand = Plus / Plus Query: 161 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 220 ||||||||||||| || |||||||| || ||||| ||||| ||||||||||||||| | Sbjct: 135 cgccatgacggtgccagatgccgagtcgcgcttccatgtcctcgcggtggacgacagcct 194 Query: 221 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 280 | ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 195 cgtcgacaggaaactcatcgagatgctgctcaagacctcgtcctaccaagtgaccacggt 254 Query: 281 ggactccgggagcaaggcgctggaggtgctggg 313 ||| ||||||||||||||||||||| ||||||| Sbjct: 255 ggattccgggagcaaggcgctggagctgctggg 287
>ref|NM_189771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 699 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 227 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 286 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 287 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 346 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggaggagttc 569 | ||||||| |||||||||||| ||||| || ||||||||| Sbjct: 347 caaggatcaacaggtgcttggaagatggtgcagaggagttc 387 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 165 atgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtcatc 224 ||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | ||| Sbjct: 1 atgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcctgatc 60 Query: 225 gaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggac 284 ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 61 gacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgtggat 120 Query: 285 tccgggagcaaggcgctggaggtgctgggattgag 319 || ||||||||||| ||||| |||| |||||||| Sbjct: 121 tctgggagcaaggccttggagctgcttggattgag 155
>emb|AJ938073.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 4 (rr4 gene) Length = 702 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 227 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 286 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 287 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 346 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggaggagttc 569 | ||||||| |||||||||||| ||||| || ||||||||| Sbjct: 347 caaggatcaacaggtgcttggaagatggtgcagaggagttc 387 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 165 atgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtcatc 224 ||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | ||| Sbjct: 1 atgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcctgatc 60 Query: 225 gaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggac 284 ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 61 gacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgtggat 120 Query: 285 tccgggagcaaggcgctggaggtgctgggattgag 319 || ||||||||||| ||||| |||| |||||||| Sbjct: 121 tctgggagcaaggccttggagctgcttggattgag 155
>dbj|AB249658.1| Oryza sativa (japonica cultivar-group) OsRR4 mRNA for typeA response regulator 4, complete cds Length = 699 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 227 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 286 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 287 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 346 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggaggagttc 569 | ||||||| |||||||||||| ||||| || ||||||||| Sbjct: 347 caaggatcaacaggtgcttggaagatggtgcagaggagttc 387 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Plus Query: 165 atgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgtcatc 224 ||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | ||| Sbjct: 1 atgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcctgatc 60 Query: 225 gaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggac 284 ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| Sbjct: 61 gacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgtggat 120 Query: 285 tccgggagcaaggcgctggaggtgctgggattgag 319 || ||||||||||| ||||| |||| |||||||| Sbjct: 121 tctgggagcaaggccttggagctgcttggattgag 155
>dbj|AK101721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061A20, full insert sequence Length = 1607 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 638 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 697 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 698 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 757 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggaggagttc 569 | ||||||| |||||||||||| ||||| || ||||||||| Sbjct: 758 caaggatcaacaggtgcttggaagatggtgcagaggagttc 798 Score = 157 bits (79), Expect = 5e-35 Identities = 139/159 (87%) Strand = Plus / Plus Query: 161 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 220 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 408 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 467 Query: 221 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggt 280 |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| || Sbjct: 468 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaagtgaccactgt 527 Query: 281 ggactccgggagcaaggcgctggaggtgctgggattgag 319 ||| || ||||||||||| ||||| |||| |||||||| Sbjct: 528 ggattctgggagcaaggccttggagctgcttggattgag 566
>gb|AY105961.1| Zea mays PCO076606 mRNA sequence Length = 932 Score = 127 bits (64), Expect = 4e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 191 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 250 |||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||| || Sbjct: 161 gttccatgtcctggcggtggacgacagcctcccggacaggaagctcatcgagaggctcct 220 Query: 251 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggcgctg 302 ||||||||| |||| |||||||||||| || ||||||||||||||||||||| Sbjct: 221 caagacctcttccttccaagtgaccactgtcgactccgggagcaaggcgctg 272 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 388 atcaggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggat 447 ||||||| |||| ||||| |||||||||| |||||||||||||| ||||||||||||| Sbjct: 346 atcaggatgtggctgtgaacctgatcatcacagactactgcatgcctggcatgacaggat 405 Query: 448 acgatctgctgaggagggtcaaggggtcatcctcactgaaggacattccggtggtgatca 507 | || ||||| | || | |||||| ||| || || || | || || ||||||||||||| Sbjct: 406 atgacctgctcaagaagatcaaggagtcgtcgtctctcagagatatcccggtggtgatca 465 Query: 508 tgtcctctgagaatgtgcctgccaggatcagcaggtgcttggagga 553 ||||||||||||| | ||| | ||||||| |||||| ||||||| Sbjct: 466 tgtcctctgagaacattccttcaaggatcaataggtgcctggagga 511
>dbj|AB042268.1| Zea mays ZmRR6 mRNA for response regulator 6, complete cds Length = 1158 Score = 127 bits (64), Expect = 4e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 191 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 250 |||||| ||||||||||||||||||||| || ||| ||||||||||||||| ||| || Sbjct: 147 gttccatgtcctggcggtggacgacagcctcccggacaggaagctcatcgagaggctcct 206 Query: 251 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggcgctg 302 ||||||||| |||| |||||||||||| || ||||||||||||||||||||| Sbjct: 207 caagacctcttccttccaagtgaccactgtcgactccgggagcaaggcgctg 258 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 388 atcaggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggat 447 ||||||| |||| ||||| |||||||||| |||||||||||||| ||||||||||||| Sbjct: 332 atcaggatgtggctgtgaacctgatcatcacagactactgcatgcctggcatgacaggat 391 Query: 448 acgatctgctgaggagggtcaaggggtcatcctcactgaaggacattccggtggtgatca 507 | || ||||| | || | |||||| ||| || || || | || || ||||||||||||| Sbjct: 392 atgacctgctcaagaagatcaaggagtcgtcgtctctcagagatatcccggtggtgatca 451 Query: 508 tgtcctctgagaatgtgcctgccaggatcagcaggtgcttggagga 553 ||||||||||||| | ||| | ||||||| |||||| ||||||| Sbjct: 452 tgtcctctgagaacattccttcaaggatcaataggtgcctggagga 497
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 161 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 220 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 41941716 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 41941775 Query: 221 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaag 270 |||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 41941776 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaag 41941825 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 41942377 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 41942436 Query: 529 ccaggatcagcaggtg 544 | ||||||| |||||| Sbjct: 41942437 caaggatcaacaggtg 41942452 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 41942196 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 41942255 Query: 469 agg 471 ||| Sbjct: 41942256 agg 41942258 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 269 agtgaccacggtggactccgggagcaaggcgctggaggtgctgggattgag 319 ||||||||| ||||| || ||||||||||| ||||| |||| |||||||| Sbjct: 41941958 agtgaccactgtggattctgggagcaaggccttggagctgcttggattgag 41942008 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctccttccact 119 |||||||||||||||||||| Sbjct: 43134632 ctcctcctcctccttccact 43134613
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 161 cgccatgacggtggtggacgccgagtcccggttccacgtcctggcggtggacgacagcgt 220 ||||||||||||||| || || ||||| |||||||| ||||| |||||||| || ||| | Sbjct: 43793 cgccatgacggtggttgatgcggagtcgcggttccatgtcctcgcggtggatgatagcct 43852 Query: 221 catcgaccggaagctcatcgagatgctgctcaagacctcctcctaccaag 270 |||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 43853 gatcgacaggaagctcatcgagatgctgctcaagaactcgtcctaccaag 43902 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 |||| ||||| ||| |||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 44454 agggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtgcctg 44513 Query: 529 ccaggatcagcaggtg 544 | ||||||| |||||| Sbjct: 44514 caaggatcaacaggtg 44529 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||||||||| ||||||||||| || |||||||| | |||||| | Sbjct: 44273 tgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagggtga 44332 Query: 469 agg 471 ||| Sbjct: 44333 agg 44335 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 269 agtgaccacggtggactccgggagcaaggcgctggaggtgctgggattgag 319 ||||||||| ||||| || ||||||||||| ||||| |||| |||||||| Sbjct: 44035 agtgaccactgtggattctgggagcaaggccttggagctgcttggattgag 44085
>ref|XM_466892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 89.7 bits (45), Expect = 9e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| ||||| |||||||| ||||||| ||||| |||||||| || |||| || |||| Sbjct: 224 tgataatcacggactactggatgccggagatgacgggatacgagctcctgaagaaagtca 283 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||||||| |||||| | || || ||||||||||||||||| ||||||||||| Sbjct: 284 aggagtcatccaagctgaagaagatccccgtggtgatcatgtcctcggagaatgtgccaa 343 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | || |||||||| ||| | ||||| ||||||||||| Sbjct: 344 caagaatcagcagatgccttgaggaaggcgcggagga 380
>emb|AJ938074.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 5 (rr5 gene) Length = 405 Score = 89.7 bits (45), Expect = 9e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 185 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 244 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 245 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 304 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||| ||||||||||||||| || |||||||| Sbjct: 305 caaggatcaacaggtgcttggaggaaggagcggagga 341 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 |||||||| ||||||||||||||| Sbjct: 46 cacgtcctcgcggtggacgacagc 69
>dbj|AB249656.1| Oryza sativa (japonica cultivar-group) OsRR11 mRNA for typeA response regulator 11, complete cds Length = 444 Score = 89.7 bits (45), Expect = 9e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| ||||| |||||||| ||||||| ||||| |||||||| || |||| || |||| Sbjct: 224 tgataatcacggactactggatgccggagatgacgggatacgagctcctgaagaaagtca 283 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||||||| |||||| | || || ||||||||||||||||| ||||||||||| Sbjct: 284 aggagtcatccaagctgaagaagatccccgtggtgatcatgtcctcggagaatgtgccaa 343 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | || |||||||| ||| | ||||| ||||||||||| Sbjct: 344 caagaatcagcagatgccttgaggaaggcgcggagga 380
>dbj|AB249654.1| Oryza sativa (japonica cultivar-group) OsRR5 mRNA for typeA response regulator 5, complete cds Length = 405 Score = 89.7 bits (45), Expect = 9e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 185 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 244 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 245 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 304 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||| ||||||||||||||| || |||||||| Sbjct: 305 caaggatcaacaggtgcttggaggaaggagcggagga 341 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 |||||||| ||||||||||||||| Sbjct: 46 cacgtcctcgcggtggacgacagc 69
>dbj|AK106426.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B09, full insert sequence Length = 839 Score = 89.7 bits (45), Expect = 9e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||| |||||||||||||| ||||||| ||||| || || || || |||| || ||||| Sbjct: 260 tgattatcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtca 319 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| || || Sbjct: 320 aggagtcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctcta 379 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||| ||||||||||||||| || |||||||| Sbjct: 380 caaggatcaacaggtgcttggaggaaggagcggagga 416 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 |||||||| ||||||||||||||| Sbjct: 121 cacgtcctcgcggtggacgacagc 144
>emb|AJ938078.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 9 (rr9 gene) Length = 606 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 191 gttccacgtcctggcggtggacgacagcgtcatcgaccggaagctcatcgagatgctgct 250 |||||| |||||||||||||| || ||| | ||| ||||||||||||||| ||| || Sbjct: 24 gttccatgtcctggcggtggatgatagccttcctgacaggaagctcatcgagaggctact 83 Query: 251 caagacctcctcctaccaagtgaccacggtggactccgggagcaaggcgctggag 305 ||||||||| || | |||||| ||||| || || |||||||||||||| |||||| Sbjct: 84 caagacctcttctttccaagttaccactgttgattccgggagcaaggctctggag 138 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 212 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 257
>dbj|AB249660.1| Oryza sativa (japonica cultivar-group) OsRR10 mRNA for typeA response regulator 10, complete cds Length = 606 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 390 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 449 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 193 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 252 Query: 450 gatct 454 ||||| Sbjct: 253 gatct 257 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 288 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || || | Sbjct: 62 ggaagctcatcgagaggctactcaagacctcttctttccaagtaaccactgttgattcgg 121 Query: 289 ggagcaaggcgctggag 305 |||||||||| |||||| Sbjct: 122 ggagcaaggctctggag 138
>dbj|AB249659.1| Oryza sativa (japonica cultivar-group) OsRR9 mRNA for typeA response regulator 9, complete cds Length = 606 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 288 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || |||| Sbjct: 62 ggaagctcatcgagaggctactcaagacctcttctttccaagttaccactgttgattccg 121 Query: 289 ggagcaaggcgctggag 305 |||||||||| |||||| Sbjct: 122 ggagcaaggctctggag 138 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 212 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 257
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 390 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 449 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 1915427 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 1915486 Query: 450 gatct 454 ||||| Sbjct: 1915487 gatct 1915491 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 1915100 ggaagctcatcgagaggctactcaagacctc 1915130
>dbj|AK058585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G01, full insert sequence Length = 919 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctcctcctaccaagtgaccacggtggactccg 288 ||||||||||||||| ||| ||||||||||| || | |||||| ||||| || || |||| Sbjct: 151 ggaagctcatcgagaggctactcaagacctcttctttccaagttaccactgttgattccg 210 Query: 289 ggagcaaggcgctggag 305 |||||||||| |||||| Sbjct: 211 ggagcaaggctctggag 227 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 301 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 346
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 390 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 449 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 1915378 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 1915437 Query: 450 gatct 454 ||||| Sbjct: 1915438 gatct 1915442 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 1915051 ggaagctcatcgagaggctactcaagacctc 1915081
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 390 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 449 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 110118 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 110177 Query: 450 gatct 454 ||||| Sbjct: 110178 gatct 110182 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 109791 ggaagctcatcgagaggctactcaagacctc 109821
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 390 caggaggtgggcgtgaatttgatcatcactgactactgcatgccgggcatgacaggatac 449 |||||||| || ||||| |||||||||| |||||||||||||| |||||||||||||| Sbjct: 52794 caggaggttggagtgaacctgatcatcacagactactgcatgcctggcatgacaggatat 52735 Query: 450 gatct 454 ||||| Sbjct: 52734 gatct 52730 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 53121 ggaagctcatcgagaggctactcaagacctc 53091
>dbj|AB042260.1| Zea mays ZmRR3 mRNA for response regulator, complete cds Length = 545 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 ||||||| || |||||||| ||||| | ||||| |||||||| || || | || | ||| Sbjct: 232 tgatcattaccgactactggatgcccgagatgactggatacgagctcctcaagaagatca 291 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||| ||| |||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 292 aggagtcgtccaggctgaaggagatccccgtggtgatcatgtcctcagagaacgtgccga 351 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||| ||||||| ||||||| ||||| ||||| Sbjct: 352 caaggatcaacaggtgcctggaggaaggcgccgagga 388 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 |||||||| ||||||||||||||| Sbjct: 93 cacgtcctcgcggtggacgacagc 116
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 68252 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 68297 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 67884 ggaagctcatcgagaggctactcaagacctc 67914
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1996697 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 1996742 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 1996329 ggaagctcatcgagaggctactcaagacctc 1996359 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 4414455 tccctcctcctcctccttcc 4414436 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggaagctcatcgagatgctgctc 251 |||||||||||| ||||||||||| Sbjct: 2537601 cggaagctcatcaagatgctgctc 2537578
>dbj|AK120926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P07, full insert sequence Length = 825 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 294 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 339 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 123 ggaagctcatcgagaggctactcaagacctc 153
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatct 454 |||||||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 2004478 tgatcatcacagactactgcatgcctggcatgacaggatatgatct 2004523 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagctcatcgagatgctgctcaagacctc 259 ||||||||||||||| ||| ||||||||||| Sbjct: 2004110 ggaagctcatcgagaggctactcaagacctc 2004140 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 4423149 tccctcctcctcctccttcc 4423130 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggaagctcatcgagatgctgctc 251 |||||||||||| ||||||||||| Sbjct: 2546632 cggaagctcatcaagatgctgctc 2546609
>ref|NM_187101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 621 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||||| ||||| || ||||| ||||| | || | ||| Sbjct: 401 tgatcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatca 460 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| || || |||||| | || ||||||||||| ||||| || ||||| ||||| Sbjct: 461 aggaatcgtctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgccca 520 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||||||| |||||||| || ||||||||||| Sbjct: 521 caaggatcagcagatgcttggaagaaggcgcggagga 557
>emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 7 (rr7 gene) Length = 621 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||||| ||||| || ||||| ||||| | || | ||| Sbjct: 401 tgatcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatca 460 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| || || |||||| | || ||||||||||| ||||| || ||||| ||||| Sbjct: 461 aggaatcgtctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgccca 520 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||||||| |||||||| || ||||||||||| Sbjct: 521 caaggatcagcagatgcttggaagaaggcgcggagga 557
>dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRNA for typeA response regulator 7, complete cds Length = 621 Score = 65.9 bits (33), Expect = 1e-07 Identities = 126/157 (80%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||||| ||||| || ||||| ||||| | || | ||| Sbjct: 401 tgatcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatca 460 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| || || |||||| | || ||||||||||| ||||| || ||||| ||||| Sbjct: 461 aggaatcgtctgagctgaagcagatcccggtggtgataatgtcgtcagagaacgtgccca 520 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 | ||||||||||| |||||||| || ||||||||||| Sbjct: 521 caaggatcagcagatgcttggaagaaggcgcggagga 557
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 473 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 532 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 24696060 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 24696001 Query: 533 gatcagcaggtg 544 ||||| |||||| Sbjct: 24696000 gatcaacaggtg 24695989 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 486 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 545 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 34411691 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 34411750 Query: 546 ttggaggatggcgcggagga 565 ||||||| ||||| ||||| Sbjct: 34411751 ctggaggagggcgccgagga 34411770 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 409 tgatcatcactgactactgcatgccgggcatgacag 444 |||| ||||||||||||| |||||| |||||||||| Sbjct: 24696240 tgataatcactgactactacatgcctggcatgacag 24696205 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 483 ctgaaggacattccggtggtgatcatgtcctctgagaa 520 |||||||| || || ||||||||||||||||| ||||| Sbjct: 26201282 ctgaaggagatccctgtggtgatcatgtcctcggagaa 26201319 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 34411365 cacgtgctggcggtggacgacagc 34411388 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 |||||||| ||||||||||||||| Sbjct: 26200779 cacgtcctcgcggtggacgacagc 26200802 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cggaagctcatcgagatgctgctc 251 |||||||||||| ||||||||||| Sbjct: 4317763 cggaagctcatcaagatgctgctc 4317786
>dbj|AK109703.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F10, full insert sequence Length = 1968 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 473 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 532 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 759 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 818 Query: 533 gatcagcaggtg 544 ||||| |||||| Sbjct: 819 gatcaacaggtg 830 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacag 444 |||| ||||||||||||| |||||| |||||||||| Sbjct: 579 tgataatcactgactactacatgcctggcatgacag 614
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 473 gtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctgccag 532 |||||| ||| |||||||||| || || |||||||| || ||||||||||||||||| | Sbjct: 85583 gtcatcttcattgaaggacataccagttgtgatcatttcttctgagaatgtgcctgcaat 85524 Query: 533 gatcagcaggtg 544 ||||| |||||| Sbjct: 85523 gatcaacaggtg 85512 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 409 tgatcatcactgactactgcatgccgggcatgacag 444 |||| ||||||||||||| |||||| |||||||||| Sbjct: 85763 tgataatcactgactactacatgcctggcatgacag 85728
>ref|XM_474315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 60.0 bits (30), Expect = 8e-06 Identities = 128/158 (81%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 296 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 355 Query: 469 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 527 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 356 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 414 Query: 528 gccaggatcagcaggtgcttggaggatggcgcggagga 565 | |||||||| ||||| ||||||| ||||| ||||| Sbjct: 415 aaccggatcagccggtgcctggaggagggcgccgagga 452 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 151 cacgtgctggcggtggacgacagc 174
>emb|AJ938075.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 6 (rr6 gene) Length = 513 Score = 60.0 bits (30), Expect = 8e-06 Identities = 128/158 (81%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 296 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 355 Query: 469 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 527 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 356 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 414 Query: 528 gccaggatcagcaggtgcttggaggatggcgcggagga 565 | |||||||| ||||| ||||||| ||||| ||||| Sbjct: 415 aaccggatcagccggtgcctggaggagggcgccgagga 452 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 151 cacgtgctggcggtggacgacagc 174
>dbj|AB249653.1| Oryza sativa (japonica cultivar-group) OsRR6 mRNA for typeA response regulator 6, complete cds Length = 513 Score = 60.0 bits (30), Expect = 8e-06 Identities = 128/158 (81%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 296 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 355 Query: 469 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 527 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 356 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 414 Query: 528 gccaggatcagcaggtgcttggaggatggcgcggagga 565 | |||||||| ||||| ||||||| ||||| ||||| Sbjct: 415 aaccggatcagccggtgcctggaggagggcgccgagga 452 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 151 cacgtgctggcggtggacgacagc 174
>dbj|AK059734.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B01, full insert sequence Length = 1011 Score = 60.0 bits (30), Expect = 8e-06 Identities = 128/158 (81%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||| |||||||| || ||||| || || | | | |||| Sbjct: 398 tgatcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtca 457 Query: 469 aggggtcatcctca-ctgaaggacattccggtggtgatcatgtcctctgagaatgtgcct 527 ||| || || ||| || ||||| || ||||||||||||||||| || ||||| ||||| Sbjct: 458 aggaatcgtc-tcagctcaaggagatcccggtggtgatcatgtcgtcggagaacgtgccg 516 Query: 528 gccaggatcagcaggtgcttggaggatggcgcggagga 565 | |||||||| ||||| ||||||| ||||| ||||| Sbjct: 517 aaccggatcagccggtgcctggaggagggcgccgagga 554 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 253 cacgtgctggcggtggacgacagc 276
>ref|XM_468534.1| Oryza sativa (japonica cultivar-group), mRNA Length = 396 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 173 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 232 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 521 ||| ||| | |||||||| |||||||||||| | ||||| || |||||| Sbjct: 233 aggagtcggcggagctgaaggagattccggtggtgctaatgtcgtcggagaat 285
>emb|AJ938072.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 3 (rr3 gene) Length = 396 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 173 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 232 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 521 ||| ||| | |||||||| |||||||||||| | ||||| || |||||| Sbjct: 233 aggagtcggcggagctgaaggagattccggtggtgctaatgtcgtcggagaat 285
>dbj|AB249655.1| Oryza sativa (japonica cultivar-group) OsRR3 mRNA for typeA response regulator 3, complete cds Length = 396 Score = 58.0 bits (29), Expect = 3e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 173 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 232 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaat 521 ||| ||| | |||||||| |||||||||||| | ||||| || |||||| Sbjct: 233 aggagtcggcggagctgaaggagattccggtggtgctaatgtcgtcggagaat 285
>dbj|AB024291.1| Zea mays ZmRR2 mRNA, complete cds Length = 793 Score = 58.0 bits (29), Expect = 3e-05 Identities = 125/157 (79%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||| || ||||| || ||||| ||||||| | || | Sbjct: 329 tgatcatcacggactactggatgcccgggatgaccgggtacgagctgctgaagcacgtga 388 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||| || | ||| || ||| ||||||||||||||||| || ||||| ||||| Sbjct: 389 aggagtcgtcggcgctgcgggccatcccggtggtgatcatgtcgtcggagaacgtgccca 448 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 || | |||||| ||||| ||||||| ||||| ||||| Sbjct: 449 cccgcatcagccggtgcctggaggagggcgccgagga 485 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 184 cacgtgctggcggtggacgacagc 207
>dbj|AB031012.1| Zea mays ZmRR2 gene for response regulator 2, complete cds Length = 3846 Score = 58.0 bits (29), Expect = 3e-05 Identities = 125/157 (79%) Strand = Plus / Plus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| |||||||| ||||| || ||||| || ||||| ||||||| | || | Sbjct: 3382 tgatcatcacggactactggatgcccgggatgaccgggtacgagctgctgaagcacgtga 3441 Query: 469 aggggtcatcctcactgaaggacattccggtggtgatcatgtcctctgagaatgtgcctg 528 ||| ||| || | ||| || ||| ||||||||||||||||| || ||||| ||||| Sbjct: 3442 aggagtcgtcggcgctgcgggccatcccggtggtgatcatgtcgtcggagaacgtgccca 3501 Query: 529 ccaggatcagcaggtgcttggaggatggcgcggagga 565 || | |||||| ||||| ||||||| ||||| ||||| Sbjct: 3502 cccgcatcagccggtgcctggaggagggcgccgagga 3538 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 3111 cacgtgctggcggtggacgacagc 3134
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 486 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 545 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 134765 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 134824 Query: 546 ttggaggatggcgcggagga 565 ||||||| ||||| ||||| Sbjct: 134825 ctggaggagggcgccgagga 134844 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 134439 cacgtgctggcggtggacgacagc 134462
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 486 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 545 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 29176 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 29235 Query: 546 ttggaggatggcgcggagga 565 ||||||| ||||| ||||| Sbjct: 29236 ctggaggagggcgccgagga 29255 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 28850 cacgtgctggcggtggacgacagc 28873
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 486 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 545 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 32969 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 33028 Query: 546 ttggaggatggcgcggagga 565 ||||||| ||||| ||||| Sbjct: 33029 ctggaggagggcgccgagga 33048 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 32643 cacgtgctggcggtggacgacagc 32666
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 486 aaggacattccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtgc 545 ||||| || ||||||||||||||||| || ||||| ||||| | |||||||| ||||| Sbjct: 100007 aaggagatcccggtggtgatcatgtcgtcggagaacgtgccgaaccggatcagccggtgc 100066 Query: 546 ttggaggatggcgcggagga 565 ||||||| ||||| ||||| Sbjct: 100067 ctggaggagggcgccgagga 100086 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 ||||| |||||||||||||||||| Sbjct: 99681 cacgtgctggcggtggacgacagc 99704
>ref|XM_466223.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 406 gactactgcatgccggagatgacaggatacgatct 440
>ref|XM_506827.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0038F20.11 mRNA Length = 1666 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 434 gactactgcatgccggagatgacaggatacgatct 468
>emb|AJ938071.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 2 (rr2 gene) Length = 759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 268 gactactgcatgccggagatgacaggatacgatct 302
>dbj|AB249662.1| Oryza sativa (japonica cultivar-group) OsRR2 mRNA for typeA response regulator 2, complete cds Length = 759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 268 gactactgcatgccggagatgacaggatacgatct 302
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 35708358 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 35708299 Query: 469 agg 471 ||| Sbjct: 35708298 agg 35708296 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 21149862 gactactgcatgccggagatgacaggatacgatct 21149828 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 498 gtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggt 543 ||||||||||||||||| ||||||||||| | || |||||||||| Sbjct: 25305715 gtggtgatcatgtcctcggagaatgtgccaacaagaatcagcaggt 25305670 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 12683185 cctcctcctcctccttccact 12683205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 23105374 tccctcctcctcctccttcc 23105355 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccctcctcctcctccttcca 117 |||||||||||||||||||| Sbjct: 20750808 ccctcctcctcctccttcca 20750789
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 409 tgatcatcactgactactgcatgccgggcatgacaggatacgatctgctgaggagggtca 468 |||||||||| || ||||||||||||| |||||||| | |||||| || | |||||||| Sbjct: 68972 tgatcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtca 68913 Query: 469 agg 471 ||| Sbjct: 68912 agg 68910
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 56578 gactactgcatgccggagatgacaggatacgatct 56544
>dbj|AK070645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L14, full insert sequence Length = 1666 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 434 gactactgcatgccggagatgacaggatacgatct 468
>dbj|AK069453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020J18, full insert sequence Length = 1412 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 420 gactactgcatgccgggcatgacaggatacgatct 454 |||||||||||||||| ||||||||||||||||| Sbjct: 406 gactactgcatgccggagatgacaggatacgatct 440
>ref|NM_104686.2| Arabidopsis thaliana ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator AT1G59940 (ARR3) mRNA, complete cds Length = 1051 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgacaggatacga 451 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 344 atttgatcatcactgattactgtatgcctggaatgactggatacga 389
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 406 atttgatcatcactgactactgcatgccgggcatgacaggatacga 451 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 132325 atttgatcatcactgattactgtatgcctggaatgactggatacga 132280
>gb|BT024848.1| Arabidopsis thaliana At1g59940 gene, complete cds Length = 696 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgacaggatacga 451 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 266 atttgatcatcactgattactgtatgcctggaatgactggatacga 311
>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1250G12 Length = 144590 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 498 gtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggt 543 ||||||||||||||||| ||||||||||| | || |||||||||| Sbjct: 72866 gtggtgatcatgtcctcggagaatgtgccaacaagaatcagcaggt 72821
>dbj|AB008486.1| Arabidopsis thaliana ARR3 mRNA for response regulator 3, complete cds Length = 1028 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgacaggatacga 451 |||||||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 321 atttgatcatcactgattactgtatgcctggaatgactggatacga 366
>gb|AC163280.2| Mus musculus BAC clone RP23-478G5 from chromosome 14, complete sequence Length = 202761 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 38 tctccctcaaatcctctcctcctctcccccac 69 |||||||| || |||||||||||||||||||| Sbjct: 141877 tctccctctaaacctctcctcctctcccccac 141908
>gb|AC154276.2| Mus musculus BAC clone RP24-260F19 from chromosome 14, complete sequence Length = 186529 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 38 tctccctcaaatcctctcctcctctcccccac 69 |||||||| || |||||||||||||||||||| Sbjct: 465 tctccctctaaacctctcctcctctcccccac 434
>emb|CT030647.17| Mouse DNA sequence from clone RP23-379I9 on chromosome 14, complete sequence Length = 205598 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 38 tctccctcaaatcctctcctcctctcccccac 69 |||||||| || |||||||||||||||||||| Sbjct: 178441 tctccctctaaacctctcctcctctcccccac 178410
>emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chromosome 3, complete sequence Length = 174972 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttccact 119 ||||||||||||||||||||||| Sbjct: 148508 tccctcctcctcctccttccact 148486
>gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, complete sequence Length = 161969 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccactct 121 ||||||||||||||||||||||| Sbjct: 53639 cctcctcctcctccttccactct 53661
>gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, complete sequence Length = 210509 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccactct 121 ||||||||||||||||||||||| Sbjct: 32265 cctcctcctcctccttccactct 32243
>emb|AL731716.10| Mouse DNA sequence from clone RP23-130L10 on chromosome 3, complete sequence Length = 49105 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttccact 119 ||||||||||||||||||||||| Sbjct: 36835 tccctcctcctcctccttccact 36813
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence Length = 209021 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccactc 120 |||||||||||||||||||||| Sbjct: 183669 cctcctcctcctccttccactc 183648
>emb|AL353631.17| Human DNA sequence from clone RP11-5N16 on chromosome 9 Contains the 5' end of the gene for netrin G2 protein (KIAA1857) and three CpG islands, complete sequence Length = 97112 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttccactc 120 ||||||||||||||||||| |||||| Sbjct: 69098 tttccctcctcctcctcctcccactc 69073
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 483 ctgaaggacattccggtggtgatcatgtcctctgagaa 520 |||||||| || || ||||||||||||||||| ||||| Sbjct: 88467 ctgaaggagatccctgtggtgatcatgtcctcggagaa 88504 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 cacgtcctggcggtggacgacagc 218 |||||||| ||||||||||||||| Sbjct: 87964 cacgtcctcgcggtggacgacagc 87987
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 199012 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccactc 120 |||||||||||||||||||||| Sbjct: 141026 cctcctcctcctccttccactc 141005
>gb|AC175203.2| Sporobolomyces roseus clone JGIBAIF-5E21, complete sequence Length = 35046 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 92 agatttccctcctcctcctcct 113 |||||||||||||||||||||| Sbjct: 14099 agatttccctcctcctcctcct 14078
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 495 ccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtg 544 ||||||||||| ||||| || ||||| ||||| | |||||||||||||| Sbjct: 15388352 ccggtggtgataatgtcgtcagagaacgtgcccacaaggatcagcaggtg 15388401
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 495 ccggtggtgatcatgtcctctgagaatgtgcctgccaggatcagcaggtg 544 ||||||||||| ||||| || ||||| ||||| | |||||||||||||| Sbjct: 95351 ccggtggtgataatgtcgtcagagaacgtgcccacaaggatcagcaggtg 95400
>emb|AL117692.5|CNS01DRP Human chromosome 14 DNA sequence BAC R-58E21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168874 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 138 tggctcttcttcctgcctggac 159 |||||||||||||||||||||| Sbjct: 143796 tggctcttcttcctgcctggac 143775
>gb|AY609772.1| Sus scrofa clone Clu_30504.scr.msk.p1.Contig1, mRNA sequence Length = 1133 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 ctcctcctcctccttccactctgcct 125 ||||||||||| |||||||||||||| Sbjct: 520 ctcctcctccttcttccactctgcct 495
>emb|AL928706.6| Mouse DNA sequence from clone RP23-54E16 on chromosome 2, complete sequence Length = 205358 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttcc 116 |||||||||||||||||||||| Sbjct: 18640 tttccctcctcctcctccttcc 18619
>emb|AL807771.6| Mouse DNA sequence from clone RP23-141C15 on chromosome 4, complete sequence Length = 233077 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 atttccctcctcctcctccttc 115 |||||||||||||||||||||| Sbjct: 75379 atttccctcctcctcctccttc 75400
>ref|NM_104929.2| Arabidopsis thaliana lipid binding AT1G62500 mRNA, complete cds Length = 1458 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 399 gatttccctcctcctcctcct 379
>ref|NM_100921.2| Arabidopsis thaliana ARR4 (RESPONSE REGULATOR 4); transcription regulator/ two-component response regulator AT1G10470 (ARR4) mRNA, complete cds Length = 1275 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 467 atttgatcatcactgattactgtatgcctggaatgac 503
>gb|AC153645.4| Mus musculus BAC clone RP24-534E8 from chromosome 13, complete sequence Length = 182805 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 170330 ttccctcctcctcctccttcc 170350
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 56484 ttccctcctcctcctccttcc 56504
>gb|AC167185.4| Mus musculus chromosome 3, clone RP23-355G8, complete sequence Length = 213731 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 157722 tttccctcctcctcctccttc 157742
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 tggcggtggacgacagcgtca 222 ||||||||||||||||||||| Sbjct: 4077426 tggcggtggacgacagcgtca 4077446
>gb|AC120359.8| Mus musculus chromosome 5, clone RP24-285E7, complete sequence Length = 141594 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 cctcaaatcctctcctcctct 62 ||||||||||||||||||||| Sbjct: 29629 cctcaaatcctctcctcctct 29649
>ref|XM_588871.2| PREDICTED: Bos taurus similar to HIRA interacting protein 3 (LOC539704), mRNA Length = 2214 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 755 tttccctcctcctcctccttc 735
>ref|XM_415090.1| PREDICTED: Gallus gallus similar to tRNA pseudouridine synthase A (Pseudouridylate synthase I) (Pseudouridine synthase I) (Uracil hydrolyase) (LOC416799), mRNA Length = 1541 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctccttccactc 120 ||||||||||||||||||||| Sbjct: 1041 ctcctcctcctccttccactc 1021
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete sequence Length = 190328 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctccttccactc 120 ||||||||||||||||||||| Sbjct: 147086 ctcctcctcctccttccactc 147066
>gb|AE008971.1| Agrobacterium tumefaciens str. C58 AT plasmid section 46 of 49 of the complete sequence Length = 10260 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 414 atcactgactactgcatgccgggcatgac 442 ||||||||||| | ||||||||||||||| Sbjct: 5922 atcactgactattccatgccgggcatgac 5894
>gb|AE007919.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 47 of 50 of the complete sequence Length = 10329 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 414 atcactgactactgcatgccgggcatgac 442 ||||||||||| | ||||||||||||||| Sbjct: 5991 atcactgactattccatgccgggcatgac 5963
>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence Length = 182940 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 5317 cctcctcctcctccttccact 5337
>gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, complete sequence Length = 218858 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ccctcctcctcctccttccac 118 ||||||||||||||||||||| Sbjct: 35128 ccctcctcctcctccttccac 35148
>gb|AC163285.3| Mus musculus BAC clone RP23-379H2 from chromosome 16, complete sequence Length = 184951 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||| |||||| Sbjct: 15783 tccctcctcctcctcctttcactct 15759
>gb|AC137108.12| Mus musculus chromosome 9, clone RP23-277J20, complete sequence Length = 204108 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcca 117 ||||||||||||||||||||| Sbjct: 48865 tccctcctcctcctccttcca 48845
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 ggtgatcatgtcctctgagaa 520 ||||||||||||||||||||| Sbjct: 118936 ggtgatcatgtcctctgagaa 118956
>gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosome 5, complete sequence Length = 186768 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 16379 tttccctcctcctcctccttc 16359
>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence Length = 154390 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||||| |||| Sbjct: 45607 tccctcctcctcctccttcctctct 45631
>emb|X63054.1|HSCMYBI1T H.sapiens DNA for transcriptional block in c-myb, intron 1 Length = 4278 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 706 gatttccctcctcctcctcct 686
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 137220 tttccctcctcctcctccttc 137200
>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence Length = 191733 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 cctcaaatcctctcctcctct 62 ||||||||||||||||||||| Sbjct: 12521 cctcaaatcctctcctcctct 12501
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 195107 tttccctcctcctcctccttc 195127
>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence Length = 198636 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 48525 cctcctcctcctccttccact 48545
>gb|AC102375.8| Mus musculus chromosome 3, clone RP23-281M6, complete sequence Length = 149467 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 131081 tttccctcctcctcctccttc 131061
>emb|CR855377.7| Zebrafish DNA sequence from clone DKEY-263F15 in linkage group 8, complete sequence Length = 107728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 13163 gatttccctcctcctcctcct 13143
>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the DXYS155E gene for DNA segment on chromosome X and Y (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene for acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY), three novel genes and three CpG islands, complete sequence Length = 189825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 152653 ttccctcctcctcctccttcc 152673
>emb|AL365494.17| Human DNA sequence from clone RP11-317B10 on chromosome 9 Contains the 3' end of the SARDH gene for sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1), the DBH gene for dopamine beta-hydroxylase (dopamine beta-monooxygenase) and a novel gene, complete sequence Length = 53242 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||||| |||| Sbjct: 41132 tccctcctcctcctccttcctctct 41156
>emb|AL354919.16| Human DNA sequence from clone RP11-84A19 on chromosome 1 Contains the 5' end of the BAI2 gene for brain-specific angiogenesis inhibitor 2, the gene for a novel protein (FLJ33697, FLJ25348, FLJ39908, FLJ25348, FLJ38510, FLJ38873), a novel gene (FLJ46627) and three CpG islands, complete sequence Length = 124413 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 56272 tttccctcctcctcctccttc 56252
>emb|AL139288.15| Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3, complete sequence Length = 151563 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 40439 ttccctcctcctcctccttcc 40419
>emb|AL133274.8| Human DNA sequence from clone RP13-94P8 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 96062 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttccactc 120 |||||||||||||||||| |||||| Sbjct: 55903 ttccctcctcctcctcctcccactc 55879
>emb|AL078602.14|HSJ360M22 Human DNA sequence from clone RP3-360M22 on chromosome 6q26-27 Contains a CpG island, complete sequence Length = 152129 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 gatcagcaggtgcttggagga 553 ||||||||||||||||||||| Sbjct: 53134 gatcagcaggtgcttggagga 53154
>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence Length = 176356 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||||| |||| Sbjct: 166973 tccctcctcctcctccttcctctct 166949
>emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 Contains the MYB gene for v-myb myeloblastosis viral oncogene homolog (avian), 2 novel genes, the 3' end of a novel protein and a CpG island, complete sequence Length = 188287 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 69634 gatttccctcctcctcctcct 69614
>ref|XM_777892.1| PREDICTED: Strongylocentrotus purpuratus similar to forkhead box P1 (LOC577677), mRNA Length = 4326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 834 tttccctcctcctcctccttc 814
>gb|AY079346.1| Arabidopsis thaliana putative proline-rich cell wall protein (At1g62500) mRNA, complete cds Length = 925 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 263 gatttccctcctcctcctcct 243
>gb|AY045962.1| Arabidopsis thaliana putative proline-rich cell wall protein (At1g62500) mRNA, complete cds Length = 1068 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 272 gatttccctcctcctcctcct 252
>emb|AJ309022.1|GFL309022 Grapevine fleck virus complete genome, isolate MT48, genomic RNA Length = 7564 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 7482 tttccctcctcctcctccttc 7502
>gb|AC091564.12| Homo sapiens chromosome 11, clone RP11-732A19, complete sequence Length = 211735 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 64241 tttccctcctcctcctccttc 64261
>gb|AC117419.5| Homo sapiens 3 BAC RP11-138C11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63032 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||||| |||| Sbjct: 41557 tccctcctcctcctccttcctctct 41581
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ccggaagctcatcgagatgctgctc 251 ||||||||||||| ||||||||||| Sbjct: 105483 ccggaagctcatcaagatgctgctc 105459
>dbj|AK126639.1| Homo sapiens cDNA FLJ44681 fis, clone BRACE3010086, moderately similar to Homo sapiens chondroitin sulfate proteoglycan 3 (neurocan) (CSPG3) Length = 4481 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttccactc 120 |||||||| |||||||||||||||| Sbjct: 1001 ttccctccccctcctccttccactc 1025
>gb|AC016825.12| Homo sapiens chromosome 10 clone RP11-498B4, complete sequence Length = 198261 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 164091 tttccctcctcctcctccttc 164071
>gb|AC036101.6| Homo sapiens chromosome 10 clone RP11-71J2, complete sequence Length = 175492 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 ctgagaatgtgcctgccagga 534 ||||||||||||||||||||| Sbjct: 124827 ctgagaatgtgcctgccagga 124847
>gb|AC099552.6| Homo sapiens BAC clone RP11-1430O6 from 7, complete sequence Length = 165873 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 147083 ttccctcctcctcctccttcc 147103 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 147066 ttccctcctcctcctccttcc 147086 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 147049 ttccctcctcctcctccttcc 147069
>gb|AC161247.2| Mus musculus BAC clone RP24-447J22 from chromosome 12, complete sequence Length = 159391 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 36036 ttccctcctcctcctccttcc 36016 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 35991 ttccctcctcctcctccttc 35972
>gb|BT024478.1| Arabidopsis thaliana At1g10470 mRNA, complete cds Length = 780 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 269 atttgatcatcactgattactgtatgcctggaatgac 305
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 20260 tttccctcctcctcctccttc 20280
>gb|AC010339.8|AC010339 Homo sapiens chromosome 5 clone CTD-2009A17, complete sequence Length = 122480 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 tcctctcctcctctcccccac 69 ||||||||||||||||||||| Sbjct: 81460 tcctctcctcctctcccccac 81440
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ccggaagctcatcgagatgctgctc 251 ||||||||||||| ||||||||||| Sbjct: 8900876 ccggaagctcatcaagatgctgctc 8900852
>emb|BX817837.1|CNS0ACFZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 301 atttgatcatcactgattactgtatgcctggaatgac 337
>emb|BX817831.1|CNS0ACG5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZH11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 348 atttgatcatcactgattactgtatgcctggaatgac 384
>gb|AC005805.12| Homo sapiens 12 PAC RP3-473L9 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 113064 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 2783 ttccctcctcctcctccttcc 2803
>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence Length = 159520 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 81858 ttccctcctcctcctccttcc 81838
>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1, complete sequence Length = 97054 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 23431 gatttccctcctcctcctcct 23411
>gb|AC138430.2| Homo sapiens chromosome 19 clone LLNLR-259H9, complete sequence Length = 43185 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttccactc 120 |||||||| |||||||||||||||| Sbjct: 25896 ttccctccccctcctccttccactc 25872
>gb|AY087579.1| Arabidopsis thaliana clone 36784 mRNA, complete sequence Length = 1134 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 316 gatttccctcctcctcctcct 296
>gb|AC116910.11| Homo sapiens chromosome 17, clone CTD-2573C9, complete sequence Length = 149156 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 131633 ttccctcctcctcctccttcc 131653
>gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1, complete sequence Length = 89934 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 24402 atttgatcatcactgattactgtatgcctggaatgac 24366
>dbj|AB010915.1| Arabidopsis thaliana mRNA for responce regulator1, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 467 atttgatcatcactgattactgtatgcctggaatgac 503
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 80244 cctcctcctcctccttccact 80264
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 31462 cctcctcctcctccttccact 31482
>gb|AC005660.3|AC005660 citb_163_g_10, complete sequence Length = 112652 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 49418 tttccctcctcctcctccttc 49438
>gb|AF170550.1|AF170550 Arabidopsis thaliana germin-like protein 7 (GLP7) gene, complete cds Length = 5437 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 109 atttgatcatcactgattactgtatgcctggaatgac 145
>gb|AC110171.29| Mus musculus chromosome 12, clone RP23-400A5, complete sequence Length = 188590 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 115352 cctcctcctcctccttccact 115332
>gb|BC089912.1| Rattus norvegicus cDNA clone IMAGE:7304849 Length = 1195 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 ggtgatcatgtcctctgagaa 520 ||||||||||||||||||||| Sbjct: 167 ggtgatcatgtcctctgagaa 147
>dbj|AP003035.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-482L11, complete sequence Length = 170638 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||| |||||||||||| Sbjct: 99813 tccctcctcctcttccttccactct 99837
>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence Length = 197546 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 82372 tttccctcctcctcctccttc 82352
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 ccggaagctcatcgagatgctgctc 251 ||||||||||||| ||||||||||| Sbjct: 8906015 ccggaagctcatcaagatgctgctc 8905991
>emb|AL929524.16| Mouse DNA sequence from clone RP23-440D4 on chromosome 4, complete sequence Length = 159107 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 130263 tttccctcctcctcctccttc 130283
>gb|AF057282.1|AF057282 Arabidopsis thaliana two-component response regulator homolog (IBC7) mRNA, complete cds Length = 1056 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 344 atttgatcatcactgattactgtatgcctggaatgac 380
>gb|AC005254.1|AC005254 Homo sapiens chromosome 19, long range PCR product from cosmid R29861, complete sequence Length = 20988 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttccactc 120 |||||||| |||||||||||||||| Sbjct: 6353 ttccctccccctcctccttccactc 6377
>gb|AC154179.1| Mus musculus BAC clone RP23-468C22 from 16, complete sequence Length = 183622 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||| |||||| Sbjct: 57291 tccctcctcctcctcctttcactct 57315
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 123863 tttccctcctcctcctccttc 123843
>gb|AC000404.1|AC000404 Genomic sequence from Human 9q34, complete sequence Length = 46651 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttccactct 121 |||||||||||||||||||| |||| Sbjct: 19861 tccctcctcctcctccttcctctct 19837
>gb|U22376.1|HSU22376 Human (c-myb) gene, complete primary cds, and five complete alternatively spliced cds Length = 40433 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 3024 gatttccctcctcctcctcct 3004
>gb|AC167687.2| Daphnia pulex clone JGIAZSN-5L15, complete sequence Length = 33538 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 27504 gatttccctcctcctcctcct 27484
>gb|U42461.1|XLU42461 Xenopus laevis neural specific DNA binding protein (Xgli3) mRNA, complete cds Length = 6695 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 169 tttccctcctcctcctccttc 149
>emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chromosome 4, complete sequence Length = 151688 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 109216 tttccctcctcctcctccttc 109236
>gb|M95584.1|HUMMYBDBP Human MYB DNA binding protein (c-myb) gene, 5' end Length = 5096 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 1396 gatttccctcctcctcctcct 1376
>gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, complete sequence Length = 190017 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 70224 tttccctcctcctcctccttc 70204
>gb|AC158595.25| Mus musculus 10 BAC RP24-216B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 231740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccact 119 ||||||||||||||||||||| Sbjct: 59885 cctcctcctcctccttccact 59865
>gb|AC010330.7| Homo sapiens chromosome 19 clone CTD-2657C13, complete sequence Length = 80240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttcc 116 ||||||||||||||||||||| Sbjct: 48037 ttccctcctcctcctccttcc 48017
>gb|AC133110.2| Homo sapiens BAC clone RP11-761N10 from 4, complete sequence Length = 59902 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctccttc 115 ||||||||||||||||||||| Sbjct: 35201 tttccctcctcctcctccttc 35221
>dbj|AB008487.1| Arabidopsis thaliana ARR4 mRNA for response regulator 4, complete cds Length = 1193 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 406 atttgatcatcactgactactgcatgccgggcatgac 442 |||||||||||||||| ||||| ||||| || ||||| Sbjct: 385 atttgatcatcactgattactgtatgcctggaatgac 421
>emb|AL670260.10| Mouse DNA sequence from clone RP23-1I17 on chromosome 4, complete sequence Length = 147052 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 gatttccctcctcctcctcct 113 ||||||||||||||||||||| Sbjct: 132609 gatttccctcctcctcctcct 132629
>gb|AC153807.1| Homo sapiens chromosome 1 clone fa0656, complete sequence Length = 43779 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 3205 tccctcctcctcctccttcc 3224
>ref|NM_121766.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT5G17600 mRNA, complete cds Length = 1243 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 130 ttccctcctcctcctccttc 149
>ref|NM_148885.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G63530 transcript variant AT3G63530.1 mRNA, complete cds Length = 1240 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctccttccact 119 |||||||||||||||||||| Sbjct: 152 ctcctcctcctccttccact 171
>ref|NM_001035845.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G63530 transcript variant AT3G63530.2 mRNA, complete cds Length = 1229 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcctcctcctccttccact 119 |||||||||||||||||||| Sbjct: 128 ctcctcctcctccttccact 147
>ref|NM_189501.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 615 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctccttccact 119 |||||||||||||||||||| Sbjct: 337 ctcctcctcctccttccact 318
>ref|XM_474571.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 687 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cggaagctcatcgagatgctgctc 251 |||||||||||| ||||||||||| Sbjct: 151 cggaagctcatcaagatgctgctc 174
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence Length = 218995 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttccactctg 122 ||||||||||||||| || ||||||||| Sbjct: 60385 tttccctcctcctccaccatccactctg 60358
>gb|BT017325.1| Zea mays clone EL01N0320A07.c mRNA sequence Length = 918 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccac 118 |||||||||||||||||||| Sbjct: 99 cctcctcctcctccttccac 118
>gb|AY779023.1| Homo sapiens interleukin 22 receptor, alpha 2 (IL22RA2) gene, complete cds Length = 32866 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 15009 ttccctcctcctcctccttc 14990
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccac 118 |||||||||||||||||||| Sbjct: 125470 cctcctcctcctccttccac 125489
>gb|AC101933.8| Mus musculus chromosome 7, clone RP24-70M5, complete sequence Length = 205123 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tttccctcctcctcctcctt 114 |||||||||||||||||||| Sbjct: 25479 tttccctcctcctcctcctt 25498
>gb|AY680852.1| Echinococcus granulosus clone 23051 microsatellite sequence Length = 149 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccac 118 |||||||||||||||||||| Sbjct: 27 cctcctcctcctccttccac 8
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 65818 tccctcctcctcctccttcc 65799
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cggaagctcatcgagatgctgctc 251 |||||||||||| ||||||||||| Sbjct: 84803 cggaagctcatcaagatgctgctc 84826
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggaagctcatcgagatgctgctc 251 |||||||||||| ||||||||||| Sbjct: 16125 cggaagctcatcaagatgctgctc 16102
>gb|AC164101.4| Mus musculus BAC clone RP23-421F16 from chromosome 8, complete sequence Length = 218236 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atttccctcctcctcctcct 113 |||||||||||||||||||| Sbjct: 165282 atttccctcctcctcctcct 165263
>gb|AC107698.8| Mus musculus chromosome 1, clone RP24-496A5, complete sequence Length = 159888 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atttccctcctcctcctcct 113 |||||||||||||||||||| Sbjct: 112076 atttccctcctcctcctcct 112057
>gb|AC145882.3| Pan troglodytes BAC clone RP43-7E19 from 7, complete sequence Length = 197080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 58717 ttccctcctcctcctccttc 58736
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 151918 tccctcctcctcctccttcc 151937
>gb|AC108821.6| Mus musculus chromosome 15, clone RP23-61D6, complete sequence Length = 216909 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 205309 tccctcctcctcctccttcc 205290
>ref|XM_329589.1| Neurospora crassa OR74A hypothetical protein (NCU08545.1) partial mRNA Length = 1593 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccctcctcctcctccttcca 117 |||||||||||||||||||| Sbjct: 1335 ccctcctcctcctccttcca 1354
>ref|XM_954978.1| Neurospora crassa OR74A hypothetical protein (NCU05811.1) partial mRNA Length = 702 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cgagatttccctcctcctcctcct 113 |||||| ||||||||||||||||| Sbjct: 460 cgagatctccctcctcctcctcct 437
>ref|XM_957934.1| Neurospora crassa OR74A hypothetical protein (NCU08545.1) partial mRNA Length = 1593 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccctcctcctcctccttcca 117 |||||||||||||||||||| Sbjct: 1335 ccctcctcctcctccttcca 1354
>ref|XM_325665.1| Neurospora crassa OR74A hypothetical protein (NCU05811.1) partial mRNA Length = 702 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cgagatttccctcctcctcctcct 113 |||||| ||||||||||||||||| Sbjct: 460 cgagatctccctcctcctcctcct 437
>gb|AC146162.2| Pan troglodytes BAC clone RP43-23P8 from 7, complete sequence Length = 183434 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 67335 tccctcctcctcctccttcc 67354
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tctccctcaaatcctctcctcctc 61 |||||||||| ||||||||||||| Sbjct: 83452 tctccctcaagtcctctcctcctc 83475
>gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosome 5, complete sequence Length = 183612 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccac 118 |||||||||||||||||||| Sbjct: 77711 cctcctcctcctccttccac 77730
>gb|AC158305.4| Mus musculus chromosome 1, clone RP23-131K23, complete sequence Length = 199641 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atttccctcctcctcctcct 113 |||||||||||||||||||| Sbjct: 23979 atttccctcctcctcctcct 23998
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 227933 tccctcctcctcctccttcc 227952
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence Length = 221724 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 200482 tccctcctcctcctccttcc 200501
>gb|AC132584.5| Mus musculus BAC clone RP24-346B15 from chromosome 7, complete sequence Length = 227856 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccactctg 122 |||||||||||||||||| ||||| Sbjct: 176085 cctcctcctcctccttcctctctg 176108
>gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosome 7, complete sequence Length = 217760 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccactctg 122 |||||||||||||||||| ||||| Sbjct: 124344 cctcctcctcctccttcctctctg 124367
>gb|AC092610.1| Homo sapiens BAC clone RP11-160E17 from 7, complete sequence Length = 162018 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 29481 tccctcctcctcctccttcc 29500
>gb|AF466694.1| Rattus norvegicus L-NAME induced actin cytoskeletal protein mRNA, complete cds Length = 12178 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccctcctcctcctccttcca 117 |||||||||||||||||||| Sbjct: 6397 ccctcctcctcctccttcca 6416
>gb|AY436327.1| Gallus gallus pituitary glycoprotein hormone alpha subunit (GPHA) gene, partial cds Length = 3240 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 gtcctctgagaatgtgcctg 528 |||||||||||||||||||| Sbjct: 2147 gtcctctgagaatgtgcctg 2166
>ref|XM_922748.2| PREDICTED: Mus musculus meningioma 1, transcript variant 2 (Mn1), mRNA Length = 5232 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tctccctcaaatcctctcctcctc 61 |||||||||| ||||||||||||| Sbjct: 4423 tctccctcaagtcctctcctcctc 4446
>ref|XM_913372.2| PREDICTED: Mus musculus meningioma 1, transcript variant 1 (Mn1), mRNA Length = 6121 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tctccctcaaatcctctcctcctc 61 |||||||||| ||||||||||||| Sbjct: 5312 tctccctcaagtcctctcctcctc 5335
>ref|XM_901656.2| PREDICTED: Mus musculus meningioma 1, transcript variant 2 (Mn1), mRNA Length = 5239 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tctccctcaaatcctctcctcctc 61 |||||||||| ||||||||||||| Sbjct: 4429 tctccctcaagtcctctcctcctc 4452
>ref|XM_485667.3| PREDICTED: Mus musculus meningioma 1, transcript variant 1 (Mn1), mRNA Length = 6128 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tctccctcaaatcctctcctcctc 61 |||||||||| ||||||||||||| Sbjct: 5318 tctccctcaagtcctctcctcctc 5341
>ref|XM_841559.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.1430) partial mRNA Length = 453 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atttccctcctcctcctcct 113 |||||||||||||||||||| Sbjct: 73 atttccctcctcctcctcct 92
>emb|CR956413.12| Pig DNA sequence from clone CH242-178F16 on chromosome 17, complete sequence Length = 73061 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccac 118 |||||||||||||||||||| Sbjct: 67976 cctcctcctcctccttccac 67995
>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete sequence Length = 202415 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 95 tttccctcctcctcctccttccactctg 122 ||||||||||||||| || ||||||||| Sbjct: 23280 tttccctcctcctccaccatccactctg 23253
>emb|CT009661.10| Mouse DNA sequence from clone CH29-621D18 on chromosome 17, complete sequence Length = 224982 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 120972 ttccctcctcctcctccttc 120953
>gb|AC145939.3| Pan troglodytes BAC clone RP43-18N13 from 7, complete sequence Length = 187077 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 119743 tccctcctcctcctccttcc 119724
>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence Length = 158764 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 70497 ttccctcctcctcctccttc 70516
>gb|AC132470.3| Mus musculus BAC clone RP23-96F5 from chromosome 14, complete sequence Length = 206002 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 173857 tccctcctcctcctccttcc 173876
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 32968 tccctcctcctcctccttcc 32987
>gb|AC123813.4| Mus musculus BAC clone RP24-229D8 from chromosome 8, complete sequence Length = 175377 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 166205 tccctcctcctcctccttcc 166186
>gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, RP23-193K14, complete sequence Length = 214157 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tcctcctcctccttccactc 120 |||||||||||||||||||| Sbjct: 74669 tcctcctcctccttccactc 74650
>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence Length = 177793 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 53967 tccctcctcctcctccttcc 53948
>gb|AC126249.4| Mus musculus BAC clone RP23-412I9 from chromosome 15, complete sequence Length = 190037 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 26180 tccctcctcctcctccttcc 26161
>gb|AC122320.4| Mus musculus BAC clone RP23-315F17 from 14, complete sequence Length = 197655 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 178769 tccctcctcctcctccttcc 178750
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tttccctcctcctcctcctt 114 |||||||||||||||||||| Sbjct: 92472 tttccctcctcctcctcctt 92453
>gb|AC118734.11| Mus musculus chromosome 18, clone RP24-170D17, complete sequence Length = 211023 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccactctg 122 ||||||||||||||||| |||||| Sbjct: 26312 cctcctcctcctccttctactctg 26335
>ref|NM_201989.1| Rattus norvegicus cardiomyopathy associated 3 (Cmya3), mRNA Length = 12178 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccctcctcctcctccttcca 117 |||||||||||||||||||| Sbjct: 6397 ccctcctcctcctccttcca 6416
>gb|AC136839.20| Medicago truncatula clone mth2-13n2, complete sequence Length = 121995 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 492 attccggtggtgatcatgtcctctgagaatgt 523 ||||| |||||||||||||| || |||||||| Sbjct: 14071 attccagtggtgatcatgtcgtcggagaatgt 14040
>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence Length = 147107 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 83004 tccctcctcctcctccttcc 82985 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 82972 tccctcctcctcctccttcc 82953
>gb|AC096792.12| Rattus norvegicus 7 BAC CH230-8O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 205454 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 11886 tccctcctcctcctccttcc 11867
>emb|BX004827.18| Human DNA sequence from clone RP13-391G2 on chromosome X Contains the SHOX gene for short stature homeobox and seven CpG islands, complete sequence Length = 119555 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttccactc 120 ||||||||||||||||||| |||| Sbjct: 75404 tccctcctcctcctccttctactc 75427
>emb|Z83837.1|HS113D11 Human DNA sequence from clone CITF22-113D11 on chromosome 22, complete sequence Length = 9894 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 8258 tccctcctcctcctccttcc 8239 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 8157 tccctcctcctcctccttcc 8138
>emb|AL807740.6| Human DNA sequence from clone RP11-203E14 on chromosome X, complete sequence Length = 166548 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 gctgaggagggtcaaggggt 474 |||||||||||||||||||| Sbjct: 65467 gctgaggagggtcaaggggt 65486
>emb|AL590105.19| Human DNA sequence from clone RP11-273H7 on chromosome 10 Contains the 5' end of the gene for protein kinase (PKE), gene KIAA1674, gene LOC170394, the 5' end of a novel gene and six CpG islands, complete sequence Length = 132772 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ttggctcttcttcctgcctg 156 |||||||||||||||||||| Sbjct: 108980 ttggctcttcttcctgcctg 108961
>emb|AL391817.18| Human DNA sequence from clone RP11-91B9 on chromosome 1 Contains the PRELP gene for proline arginine-rich end leucine-rich repeat protein and the OPTC gene for opticin, complete sequence Length = 162436 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 22780 tccctcctcctcctccttcc 22761
>ref|XM_502854.1| Yarrowia lipolytica CLIB122, YALI0D15304g predicted mRNA Length = 4905 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 4535 tccctcctcctcctccttcc 4554
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aggacattccggtggtgatc 506 |||||||||||||||||||| Sbjct: 3225548 aggacattccggtggtgatc 3225529
>emb|AL355974.19| Human DNA sequence from clone RP11-403A3 on chromosome 13, complete sequence Length = 131303 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccctcctcctcctccttcca 117 |||||||||||||||||||| Sbjct: 97942 ccctcctcctcctccttcca 97961
>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland Research Institute) complete sequence Length = 214386 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 143996 tccctcctcctcctccttcc 144015
>gb|AC091618.3| Rattus norvegicus strain Brown Norway clone RP31-494C9, complete sequence Length = 137008 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 111456 tccctcctcctcctccttcc 111437
>emb|AL121917.20|HSJ309F20 Human DNA sequence from clone RP1-309F20 on chromosome 20 Contains part of the GNAS complex locus, a novel gene and a CpG island, complete sequence Length = 42807 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cctcctcctcctccttccac 118 |||||||||||||||||||| Sbjct: 31412 cctcctcctcctccttccac 31431
>emb|AL050337.6|HSJ503F13 Human DNA sequence from clone RP3-503F13 on chromosome 6q24.1-25.2 Contains the IFNGR1 gene for interferon gamma receptor 1, the gene for class II cytokine receptor (IL22RA2) (interleukin 22-binding protein, IL22BP) and a putative CpG island, complete sequence Length = 113811 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 22194 ttccctcctcctcctccttc 22213
>emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100H13 on chromosome 20q11.2 Contains the 3' end of the gene for a novel protein (KIAA1219), a novel gene, a HSPC037 pseudogene, the C20orf95 gene for a novel RhoGAP domain-containing protein and two CpG islands, complete sequence Length = 116792 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 64529 ttccctcctcctcctccttc 64548
>gb|AC131602.4| Rattus norvegicus 2 BAC CH230-33J10 (Children's Hospital Oakland Research Institute) complete sequence Length = 216155 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atttccctcctcctcctcct 113 |||||||||||||||||||| Sbjct: 140651 atttccctcctcctcctcct 140670
>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four novel genes, an eukaryotic translation elongation factor 2 (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene, the Eif4enif1 gene for eukaryotic translation initiation factor 4E nuclear import factor 1, the Drg1 gene for developmentally regulated GTP binding protein 1, the Zfp278 gene for zinc finger protein 278, the 3' end of the Limk2 gene LIM motif-containing protein kinase 2 and five CpG islands, complete sequence Length = 214546 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 148170 tccctcctcctcctccttcc 148189
>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the 3' end of the Col27a1 gene for procollagen type XXVII alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1, 2 and 3, an orosomucoid pseudogene, the gene for a novel protein similar to human AT-hook protein AKNA, gene 4933437N03Rik, the Whrn gene for whirlin and two CpG islands, complete sequence Length = 214370 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 29691 tccctcctcctcctccttcc 29710
>emb|AL732522.1|ATTEL3S Arabidopsis thaliana DNA chromosome 3, segment TEL3S Length = 3733 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcctcctcctccttccact 119 |||||||||||||||||||| Sbjct: 2211 ctcctcctcctccttccact 2192
>emb|AL645594.9| Mouse DNA sequence from clone RP23-316C11 on chromosome 11 Contains the Cct6b gene for chaperonin subunit 6b (zeta), a barrier to autointegration factor 1 (Banf1) pseudogene, a GTP binding protein 3 (Gtpbp3) pseudogene, a ribosomal protein S20 (Rps20) pseudogene, three novel genes, the Lig3 gene for ATP-dependent DNA ligase III,, complete sequence Length = 178364 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 50285 tccctcctcctcctccttcc 50304
>emb|AL391151.1|ATK10A8 Arabidopsis thaliana DNA chromosome 5, BAC clone K10A8 (ESSA project) Length = 43387 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 24655 ttccctcctcctcctccttc 24636
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3 Length = 91303 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 504 atcatgtcctctgagaatgtgcctgccaggatcagcaggt 543 ||||||||||| ||||| || ||||| || |||||||||| Sbjct: 38740 atcatgtcctcagagaacgttcctgcaagaatcagcaggt 38779
>emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7H11orf14 gene, D7H11orf15 gene, D7H11orf16 gene and C11orf17 gene Length = 234169 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 cctcctcctcctccttccactctg 122 |||||||||||||||||| ||||| Sbjct: 85303 cctcctcctcctccttcctctctg 85280
>gb|AC165057.2| Phakopsora pachyrhizi clone JGIAFNA-1561A7, complete sequence Length = 31405 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cctcctcctccttccactctgcct 125 |||||||||||||||||| ||||| Sbjct: 22018 cctcctcctccttccactgtgcct 21995
>gb|AC165054.1| Phakopsora pachyrhizi clone JGIAFNA-1345A14, complete sequence Length = 37601 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cctcctcctccttccactctgcct 125 |||||||||||||||||| ||||| Sbjct: 22475 cctcctcctccttccactgtgcct 22452
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence Length = 185644 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 ttccctcctcctcctccttc 115 |||||||||||||||||||| Sbjct: 50926 ttccctcctcctcctccttc 50945
>emb|AL596264.13| Mouse DNA sequence from clone RP23-232G8 on chromosome 11 Contains a novel gene, complete sequence Length = 175724 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 tccctcctcctcctccttcc 116 |||||||||||||||||||| Sbjct: 156299 tccctcctcctcctccttcc 156280
>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a novel gene, complete sequence Length = 226006 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ttccctcctcctcctccttccact 119 |||||||||||||||||| ||||| Sbjct: 167691 ttccctcctcctcctcctcccact 167668 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,306,695 Number of Sequences: 3902068 Number of extensions: 6306695 Number of successful extensions: 504248 Number of sequences better than 10.0: 376 Number of HSP's better than 10.0 without gapping: 383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 496259 Number of HSP's gapped (non-prelim): 7966 length of query: 569 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 546 effective length of database: 17,143,297,704 effective search space: 9360240546384 effective search space used: 9360240546384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
